| Clone Name | bast17d05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY224459.1| Oryza sativa (japonica cultivar-group) isolate 23495 unknown mRNA Length = 1008 Score = 331 bits (167), Expect = 1e-87 Identities = 209/223 (93%) Strand = Plus / Plus Query: 243 cctcccacgtcgacccgttcctcgtggaggcgctcgacaacccccgccaccgcctcatgg 302 |||| ||||| || || |||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 65 cctcgcacgtggatcccttcctcgtcgaggcgctcgacaaccctcgccaccgcctcatgg 124 Query: 303 ttttgcggatggaaatggatatacagaaatttatgcagaatcatcaactgcatgaatttg 362 ||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 125 ttttgcgtatggcaatggatatacagaaatttatgcagaatcctcaactgcatgaattcg 184 Query: 363 aattccagcattttccaacttcctacctccgctgtgctgctcatcgtgttgcacaacatt 422 |||||||||||||||||||||| || |||||||||||||||||||||||||||||||| | Sbjct: 185 aattccagcattttccaacttcttatctccgctgtgctgctcatcgtgttgcacaacact 244 Query: 423 atggtttagagactacagtagcagatagcttagttgatggttc 465 |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 245 atggtttagagactacagtagcagatagcttagtagatggttc 287
>dbj|AK101609.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052B11, full insert sequence Length = 1339 Score = 331 bits (167), Expect = 1e-87 Identities = 209/223 (93%) Strand = Plus / Plus Query: 243 cctcccacgtcgacccgttcctcgtggaggcgctcgacaacccccgccaccgcctcatgg 302 |||| ||||| || || |||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 228 cctcgcacgtggatcccttcctcgtcgaggcgctcgacaaccctcgccaccgcctcatgg 287 Query: 303 ttttgcggatggaaatggatatacagaaatttatgcagaatcatcaactgcatgaatttg 362 ||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 288 ttttgcgtatggcaatggatatacagaaatttatgcagaatcctcaactgcatgaattcg 347 Query: 363 aattccagcattttccaacttcctacctccgctgtgctgctcatcgtgttgcacaacatt 422 |||||||||||||||||||||| || |||||||||||||||||||||||||||||||| | Sbjct: 348 aattccagcattttccaacttcttatctccgctgtgctgctcatcgtgttgcacaacact 407 Query: 423 atggtttagagactacagtagcagatagcttagttgatggttc 465 |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 408 atggtttagagactacagtagcagatagcttagtagatggttc 450 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 4 cgcagccacttcgggatcgggaagcgg 30 ||||||| ||||||||||||||||||| Sbjct: 11 cgcagccgcttcgggatcgggaagcgg 37
>gb|AC130729.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668F02, complete sequence Length = 178061 Score = 262 bits (132), Expect = 1e-66 Identities = 156/164 (95%) Strand = Plus / Plus Query: 302 gttttgcggatggaaatggatatacagaaatttatgcagaatcatcaactgcatgaattt 361 |||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 125671 gttttgcgtatggcaatggatatacagaaatttatgcagaatcctcaactgcatgaattc 125730 Query: 362 gaattccagcattttccaacttcctacctccgctgtgctgctcatcgtgttgcacaacat 421 ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 125731 gaattccagcattttccaacttcttatctccgctgtgctgctcatcgtgttgcacaacac 125790 Query: 422 tatggtttagagactacagtagcagatagcttagttgatggttc 465 ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 125791 tatggtttagagactacagtagcagatagcttagtagatggttc 125834 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 243 cctcccacgtcgacccgttcctcgtggaggcgctcgacaacccccgccaccgcctcatgg 302 |||| ||||| || || |||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 124301 cctcgcacgtggatcccttcctcgtcgaggcgctcgacaaccctcgccaccgcctcatgg 124360 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 4 cgcagccacttcgggatcgggaagcgg 30 ||||||| ||||||||||||||||||| Sbjct: 124084 cgcagccgcttcgggatcgggaagcgg 124110
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 262 bits (132), Expect = 1e-66 Identities = 156/164 (95%) Strand = Plus / Plus Query: 302 gttttgcggatggaaatggatatacagaaatttatgcagaatcatcaactgcatgaattt 361 |||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 19984507 gttttgcgtatggcaatggatatacagaaatttatgcagaatcctcaactgcatgaattc 19984566 Query: 362 gaattccagcattttccaacttcctacctccgctgtgctgctcatcgtgttgcacaacat 421 ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 19984567 gaattccagcattttccaacttcttatctccgctgtgctgctcatcgtgttgcacaacac 19984626 Query: 422 tatggtttagagactacagtagcagatagcttagttgatggttc 465 ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 19984627 tatggtttagagactacagtagcagatagcttagtagatggttc 19984670 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 243 cctcccacgtcgacccgttcctcgtggaggcgctcgacaacccccgccaccgcctcatgg 302 |||| ||||| || || |||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 19983137 cctcgcacgtggatcccttcctcgtcgaggcgctcgacaaccctcgccaccgcctcatgg 19983196 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 4 cgcagccacttcgggatcgggaagcgg 30 ||||||| ||||||||||||||||||| Sbjct: 19982920 cgcagccgcttcgggatcgggaagcgg 19982946
>gb|BT018581.1| Zea mays clone EL01N0446A04.d mRNA sequence Length = 1555 Score = 256 bits (129), Expect = 6e-65 Identities = 198/221 (89%) Strand = Plus / Plus Query: 236 agggtagcctcccacgtcgacccgttcctcgtggaggcgctcgacaacccccgccaccgc 295 ||||| ||||| ||||| |||||||||||||| ||||||||||||||||| |||||||| Sbjct: 241 agggtcgcctcacacgtggacccgttcctcgtcgaggcgctcgacaaccctcgccaccgt 300 Query: 296 ctcatggttttgcggatggaaatggatatacagaaatttatgcagaatcatcaactgcat 355 ||||||||| | ||||||||| |||||||||| || ||||||||||| | ||| ||||| Sbjct: 301 ctcatggttctacggatggaactggatatacaaaactttatgcagaaccctcagctgcag 360 Query: 356 gaatttgaattccagcattttccaacttcctacctccgctgtgctgctcatcgtgttgca 415 || |||||||||||| | ||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 361 gagtttgaattccagaactttccgacttcttacctccgctgtgctgctcatcgtgttgca 420 Query: 416 caacattatggtttagagactacagtagcagatagcttagt 456 ||||||||||| |||||||||| |||||||||||| ||||| Sbjct: 421 caacattatggcttagagactatagtagcagatagtttagt 461
>gb|BT017305.1| Zea mays clone EL01N0316E09.c mRNA sequence Length = 1435 Score = 236 bits (119), Expect = 6e-59 Identities = 200/227 (88%) Strand = Plus / Plus Query: 230 gacgacagggtagcctcccacgtcgacccgttcctcgtggaggcgctcgacaacccccgc 289 ||||| ||||| ||||| ||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 234 gacgagagggtcgcctcacacgtggacccgttcctcgtagaggcgctcgacaaccctcgc 293 Query: 290 caccgcctcatggttttgcggatggaaatggatatacagaaatttatgcagaatcatcaa 349 ||||||||||||||| | ||||||||| ||||||||| || ||||||||||| | ||| Sbjct: 294 caccgcctcatggttctacggatggaactggatatacgaaactttatgcagaaccctcag 353 Query: 350 ctgcatgaatttgaattccagcattttccaacttcctacctccgctgtgctgctcatcgt 409 ||||| || || ||||||||| | ||||| ||||| ||||| |||||||||||||||||| Sbjct: 354 ctgcaggagttcgaattccagaactttccgacttcttacctacgctgtgctgctcatcgt 413 Query: 410 gttgcacaacattatggtttagagactacagtagcagatagcttagt 456 ||||||||||||||||| |||||||||| ||| |||||||| ||||| Sbjct: 414 gttgcacaacattatggcttagagactatagtggcagatagtttagt 460
>gb|AY596557.1| Saccharum officinarum clone SCCCCL3120B05, complete sequence Length = 1460 Score = 236 bits (119), Expect = 6e-59 Identities = 200/227 (88%) Strand = Plus / Plus Query: 230 gacgacagggtagcctcccacgtcgacccgttcctcgtggaggcgctcgacaacccccgc 289 ||||| ||||| ||||| ||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 277 gacgagagggtcgcctcacacgtggacccgttcctcgtcgaggcgctcgacaacccgcgc 336 Query: 290 caccgcctcatggttttgcggatggaaatggatatacagaaatttatgcagaatcatcaa 349 ||||||||||||||| | ||||||||| |||||||||| | ||||||||||| ||| Sbjct: 337 caccgcctcatggttctacggatggaactggatatacaaagctttatgcagaactctcag 396 Query: 350 ctgcatgaatttgaattccagcattttccaacttcctacctccgctgtgctgctcatcgt 409 ||||| || || ||||||||| | | ||| ||||| |||||||||||||||||||||||| Sbjct: 397 ctgcaggagttcgaattccagaactatccgacttcttacctccgctgtgctgctcatcgt 456 Query: 410 gttgcacaacattatggtttagagactacagtagcagatagcttagt 456 ||||||||||||||||| |||||||||| |||||||||||| ||||| Sbjct: 457 gttgcacaacattatggcttagagactatagtagcagatagtttagt 503
>gb|AY103781.1| Zea mays PCO113646 mRNA sequence Length = 1654 Score = 236 bits (119), Expect = 6e-59 Identities = 200/227 (88%) Strand = Plus / Plus Query: 230 gacgacagggtagcctcccacgtcgacccgttcctcgtggaggcgctcgacaacccccgc 289 ||||| ||||| ||||| ||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 426 gacgagagggtcgcctcacacgtggacccgttcctcgtagaggcgctcgacaaccctcgc 485 Query: 290 caccgcctcatggttttgcggatggaaatggatatacagaaatttatgcagaatcatcaa 349 ||||||||||||||| | ||||||||| ||||||||| || ||||||||||| | ||| Sbjct: 486 caccgcctcatggttctacggatggaactggatatacgaaactttatgcagaaccctcag 545 Query: 350 ctgcatgaatttgaattccagcattttccaacttcctacctccgctgtgctgctcatcgt 409 ||||| || || ||||||||| | ||||| ||||| ||||| |||||||||||||||||| Sbjct: 546 ctgcaggagttcgaattccagaactttccgacttcttacctacgctgtgctgctcatcgt 605 Query: 410 gttgcacaacattatggtttagagactacagtagcagatagcttagt 456 ||||||||||||||||| |||||||||| ||| |||||||| ||||| Sbjct: 606 gttgcacaacattatggcttagagactatagtggcagatagtttagt 652
>emb|AL353696.8| Human DNA sequence from clone RP11-560G8 on chromosome 9, complete sequence Length = 181717 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 24 gaagcgggaggggaagggagaggcagg 50 |||| |||||||||||||||||||||| Sbjct: 107331 gaagtgggaggggaagggagaggcagg 107305
>ref|NM_129661.2| Arabidopsis thaliana nucleic acid binding AT2G40960 mRNA, complete cds Length = 1252 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Plus Query: 365 ttccagcattttccaacttcctacctccgctgtgctgctcatcgtgttgc 414 ||||||||||| || || || |||||||| | ||| |||||||||||||| Sbjct: 290 ttccagcatttccctacatcatacctccgttttgcggctcatcgtgttgc 339
>gb|AC154910.3| Mus musculus BAC clone RP23-70L9 from chromosome 12, complete sequence Length = 243671 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 gggaggggaagggagaggcagg 50 |||||||||||||||||||||| Sbjct: 143199 gggaggggaagggagaggcagg 143220
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 390 tccgctgtgctgctcatcgtgt 411 |||||||||||||||||||||| Sbjct: 2768544 tccgctgtgctgctcatcgtgt 2768565
>gb|AC004261.3| Arabidopsis thaliana chromosome 2 clone T3K9 map CIC11C08, complete sequence Length = 91539 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Minus Query: 365 ttccagcattttccaacttcctacctccgctgtgctgctcatcgtgttgc 414 ||||||||||| || || || |||||||| | ||| |||||||||||||| Sbjct: 89490 ttccagcatttccctacatcatacctccgttttgcggctcatcgtgttgc 89441
>gb|AC002409.3| Arabidopsis thaliana chromosome 2 clone T20B5 map CIC11C08, complete sequence Length = 72839 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Plus Query: 365 ttccagcattttccaacttcctacctccgctgtgctgctcatcgtgttgc 414 ||||||||||| || || || |||||||| | ||| |||||||||||||| Sbjct: 66014 ttccagcatttccctacatcatacctccgttttgcggctcatcgtgttgc 66063
>gb|AC140464.3| Mus musculus BAC clone RP24-383H6 from 12, complete sequence Length = 113482 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 gggaggggaagggagaggcagg 50 |||||||||||||||||||||| Sbjct: 15345 gggaggggaagggagaggcagg 15366
>gb|AC164079.11| Mus musculus chromosome 1, clone RP23-15E12, complete sequence Length = 215135 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 gggaagcgggaggggaagggagagg 46 |||||| |||||||||||||||||| Sbjct: 131018 gggaagggggaggggaagggagagg 130994
>gb|AC158308.4| Mus musculus chromosome 3, clone RP23-182M12, complete sequence Length = 176856 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 gggaggggaagggagaggcag 49 ||||||||||||||||||||| Sbjct: 152732 gggaggggaagggagaggcag 152712
>ref|XM_416882.1| PREDICTED: Gallus gallus similar to ubiquitin protein ligase E3A isoform 3; human papilloma virus E6-associated protein; oncogenic protein-associated protein E6-AP; CTCL tumor antigen se37-2 (LOC418686), mRNA Length = 3627 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 gcgggaggggaagggagaggc 47 ||||||||||||||||||||| Sbjct: 26 gcgggaggggaagggagaggc 6
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 197 gacgagggacggccgagggaggcga 221 |||||||||||| |||||||||||| Sbjct: 624446 gacgagggacgggcgagggaggcga 624422
>gb|AC125154.3| Mus musculus BAC clone RP24-380C2 from chromosome 3, complete sequence Length = 186277 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ggaagggagaggcaggcgagt 55 ||||||||||||||||||||| Sbjct: 124404 ggaagggagaggcaggcgagt 124384
>emb|AL353662.19| Human DNA sequence from clone RP11-571F15 on chromosome 9 Contains the UBAP gene for ubiquitin associated protein, the gene for a novel protein similar to kinesin-like proteins, the KIF24 gene for kinesin family member 24 (FLJ10933), ribosomal protein S8 (RPS8) and L35A (RPL35A) pseudogenes, a serine (or cysteine) proteinase inhibitor (collagen binding protein 1) (SERPINH1) pseudogene, the 5' end of the NUDT2 gene for nudix (nucleoside diphosphate linked moiety X)-type motif 2 and three CpG islands, complete sequence Length = 167998 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 gggaagcgggaggggaagggagagg 46 |||||| |||||||||||||||||| Sbjct: 52277 gggaagggggaggggaagggagagg 52253
>emb|AL353812.13| Human DNA sequence from clone RP11-384D7 on chromosome 20 Contains the 5' end of the C20orf22 for chromosome 20 open reading frame 22 (DKFZp434P106), the PPIAP2 gene for peptidylprolyl isomerase A (cyclophilin A) pseudogene 2, the 5' end of the gene for a novel protein (KIAA0186) and three CpG islands, complete sequence Length = 129794 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 gggaagcgggaggggaagggagagg 46 |||||| |||||||||||||||||| Sbjct: 91825 gggaagggggaggggaagggagagg 91849
>emb|AL035686.15|HS965N20 Human DNA sequence from clone RP5-965N20 on chromosome 20q13.13-13.2 Contains ESTs, STSs and GSSs, complete sequence Length = 127197 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 gggaggggaagggagaggcag 49 ||||||||||||||||||||| Sbjct: 49240 gggaggggaagggagaggcag 49220
>gb|AC157587.7| Mus musculus BAC clone RP24-199E1 from chromosome 5, complete sequence Length = 188787 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 gggaagcgggaggggaagggagagg 46 |||||| |||||||||||||||||| Sbjct: 137749 gggaagggggaggggaagggagagg 137725
>emb|AL645862.14| Mouse DNA sequence from clone RP23-223A11 on chromosome 11, complete sequence Length = 176011 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 gggaagcgggaggggaagggagagg 46 |||||| |||||||||||||||||| Sbjct: 38570 gggaagggggaggggaagggagagg 38546
>emb|AL645943.19| Mouse DNA sequence from clone RP23-130E22 on chromosome 11 Contains a prohibitin (Phb) pseudogene and a novel gene, complete sequence Length = 213383 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 gggaagcgggaggggaagggagagg 46 |||||| |||||||||||||||||| Sbjct: 44959 gggaagggggaggggaagggagagg 44935
>emb|AL672199.16| Mouse DNA sequence from clone RP23-171O21 on chromosome 11 Contains the Srcasm gene for Src activating and signaling molecule and the 3' end of a novel gene, complete sequence Length = 150260 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 283 cccccgccaccgcctcatggttttg 307 |||||||||||||| |||||||||| Sbjct: 50489 cccccgccaccgccccatggttttg 50513
>emb|AL603984.7| Mouse DNA sequence from clone RP23-137B16 on chromosome 11 Contains a novel gene, the 5' end of the Meis1 gene for myeloid ecotropic viral integration site 1 and two Cpg islands, complete sequence Length = 224602 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 gggaagcgggaggggaagggagagg 46 |||||| |||||||||||||||||| Sbjct: 41860 gggaagggggaggggaagggagagg 41836
>gb|AC102600.11| Mus musculus chromosome 3, clone RP23-376E16, complete sequence Length = 131703 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 gggaggggaagggagaggcag 49 ||||||||||||||||||||| Sbjct: 48377 gggaggggaagggagaggcag 48397
>gb|AC147103.3| Pan troglodytes BAC clone RP43-31L11 from chromosome 7, complete sequence Length = 222089 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 gggaagcgggaggggaagggagagg 46 |||||| |||||||||||||||||| Sbjct: 127592 gggaagggggaggggaagggagagg 127568
>gb|AY108958.1| Zea mays PCO060695 mRNA sequence Length = 527 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 agcgggaggggaagggagagg 46 ||||||||||||||||||||| Sbjct: 103 agcgggaggggaagggagagg 83
>emb|CT010520.15| Mouse DNA sequence from clone RP23-349A19 on chromosome 14, complete sequence Length = 175582 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 gggaagcgggaggggaagggagagg 46 |||||| |||||||||||||||||| Sbjct: 112085 gggaagggggaggggaagggagagg 112061
>emb|AL663052.8| Mouse DNA sequence from clone RP23-202N14 on chromosome X, complete sequence Length = 202972 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 ggaagggagaggcaggcgagt 55 ||||||||||||||||||||| Sbjct: 4731 ggaagggagaggcaggcgagt 4751
>gb|AC154009.1| Mus musculus 6 NOVECTOR RP24-544G1 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 140214 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 gggaagcgggaggggaagggagag 45 |||||| ||||||||||||||||| Sbjct: 62187 gggaagggggaggggaagggagag 62210
>gb|AC164981.2| Mus musculus BAC clone RP23-121F5 from chromosome 17, complete sequence Length = 243701 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 agcgggaggggaagggagag 45 |||||||||||||||||||| Sbjct: 107271 agcgggaggggaagggagag 107290
>ref|XM_478609.1| Oryza sativa (japonica cultivar-group), mRNA Length = 597 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cctcgcctcccgccgacgag 202 |||||||||||||||||||| Sbjct: 437 cctcgcctcccgccgacgag 456
>gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0004E08, complete sequence Length = 158294 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ccctaccacccctcccctcgccgc 116 |||| ||||||||||||||||||| Sbjct: 56898 ccctgccacccctcccctcgccgc 56921
>ref|XM_879288.1| PREDICTED: Bos taurus similar to peptidase D, transcript variant 2 (LOC615158), mRNA Length = 1165 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cagggtagcctcccacgtcg 254 |||||||||||||||||||| Sbjct: 448 cagggtagcctcccacgtcg 429
>ref|XM_866908.1| PREDICTED: Bos taurus similar to peptidase D, transcript variant 1 (LOC615158), mRNA Length = 1293 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cagggtagcctcccacgtcg 254 |||||||||||||||||||| Sbjct: 605 cagggtagcctcccacgtcg 586
>gb|AC123927.3| Mus musculus BAC clone RP24-329L20 from chromosome 18, complete sequence Length = 124464 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 306 tgcggatggaaatggatatacaga 329 |||||| ||||||||||||||||| Sbjct: 91705 tgcggagggaaatggatatacaga 91728
>gb|AC079365.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-172N5, complete sequence Length = 191310 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 gggaagcgggaggggaagggagag 45 |||||| ||||||||||||||||| Sbjct: 92906 gggaagggggaggggaagggagag 92929
>ref|NG_000019.3| Homo sapiens chorionic gonadotropin beta region (CGB@) on chromosome 19 Length = 72001 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ggaggggaagggagaggcag 49 |||||||||||||||||||| Sbjct: 59868 ggaggggaagggagaggcag 59887 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ggaggggaagggagaggcag 49 |||||||||||||||||||| Sbjct: 53281 ggaggggaagggagaggcag 53300 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 ggaggggaagggagaggcag 49 |||||||||||||||||||| Sbjct: 46365 ggaggggaagggagaggcag 46346 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 ggaggggaagggagaggcag 49 |||||||||||||||||||| Sbjct: 40211 ggaggggaagggagaggcag 40192 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ggaggggaagggagaggcag 49 |||||||||||||||||||| Sbjct: 35081 ggaggggaagggagaggcag 35100
>ref|NM_008820.1| Mus musculus peptidase D (Pepd), mRNA Length = 1876 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cagggtagcctcccacgtcg 254 |||||||||||||||||||| Sbjct: 1204 cagggtagcctcccacgtcg 1185
>gb|AC149058.7| Mus musculus BAC clone RP23-338G5 from chromosome 7, complete sequence Length = 219369 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cagggtagcctcccacgtcg 254 |||||||||||||||||||| Sbjct: 43466 cagggtagcctcccacgtcg 43485
>gb|AC122801.3| Mus musculus BAC clone RP23-471L3 from chromosome 18, complete sequence Length = 187926 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 306 tgcggatggaaatggatatacaga 329 |||||| ||||||||||||||||| Sbjct: 153300 tgcggagggaaatggatatacaga 153277
>gb|AY459337.1| Oryza sativa (japonica cultivar-group) clone CL003615.3 R2R3-MYB gene region Length = 42296 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 agggaggcgacggaggtgga 231 |||||||||||||||||||| Sbjct: 22845 agggaggcgacggaggtgga 22864
>gb|AC125330.5| Mus musculus BAC clone RP23-217A6 from chromosome 6, complete sequence Length = 182355 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 gggaagcgggaggggaagggagag 45 |||||| ||||||||||||||||| Sbjct: 173663 gggaagggggaggggaagggagag 173686
>emb|AL355522.11| Human DNA sequence from clone RP11-546O15 on chromosome 6 Contains the 3' end of the CLIC5 gene for chloride intracellular channel 5, complete sequence Length = 182982 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 atttgaattccagcattttc 377 |||||||||||||||||||| Sbjct: 27071 atttgaattccagcattttc 27090
>emb|AL021808.2|HS24O18 Human DNA sequence from clone XXbac-24O18 on chromosome 6p21.31-22.2 Contains a zinc finger protein pseudogene, vomeronasal olfactory 1 receptor chromosome 6-1 pseudogene VN1R6-1P, the POM121L2 gene for POM121 membrane glycoprotein (rat homolog)-like 2, the PRSS16 gene for thymus serine protease 16, ESTs, STSs, GSSs and three CpG islands, complete sequence Length = 154066 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 ttgcacaacattatggtttagaga 434 ||||||||||||||||||| |||| Sbjct: 89634 ttgcacaacattatggttttgaga 89611
>gb|AC164291.2| Mus musculus BAC clone RP24-85F23 from chromosome 16, complete sequence Length = 237479 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 ggaagcgggaggggaagggagagg 46 ||||| |||||||||||||||||| Sbjct: 56908 ggaagtgggaggggaagggagagg 56885
>emb|AL669814.16| Mouse DNA sequence from clone RP23-431J18 on chromosome 11 Contains the 5' end of the Ranbp17 gene for RAN binding protein 17, the Gabrp gene for gamma-aminobutyric acid (GABA-A) receptor, pi, the 3' end of the Kcnip1 gene for Kv channel-interacting protein 1 and a CpG island, complete sequence Length = 198320 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 gggaagcgggaggggaagggagag 45 |||||| ||||||||||||||||| Sbjct: 91394 gggaagggggaggggaagggagag 91417
>gb|AF393831.1| Mus musculus Rac/Cdc42 guanine nucleotide exchange factor 6 (Arhgef6) mRNA, complete cds Length = 4567 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 gggaagcgggaggggaagggagag 45 |||||| ||||||||||||||||| Sbjct: 2686 gggaagggggaggggaagggagag 2663
>gb|AC068298.16| Homo sapiens 3 BAC RP11-496B10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180335 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aatttgaattccagcatttt 376 |||||||||||||||||||| Sbjct: 45689 aatttgaattccagcatttt 45708
>emb|BX470262.7| Zebrafish DNA sequence from clone CH211-120K20 in linkage group 14, complete sequence Length = 164673 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 tatacagaaatttatgcaga 341 |||||||||||||||||||| Sbjct: 118207 tatacagaaatttatgcaga 118226
>gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0034B05, complete sequence Length = 125655 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ccctaccacccctcccctcgccgc 116 |||| ||||||||||||||||||| Sbjct: 122553 ccctgccacccctcccctcgccgc 122576
>gb|BC086644.1| Mus musculus peptidase D, mRNA (cDNA clone MGC:113745 IMAGE:6807359), complete cds Length = 1847 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cagggtagcctcccacgtcg 254 |||||||||||||||||||| Sbjct: 1155 cagggtagcctcccacgtcg 1136
>gb|AC104461.2| Homo sapiens chromosome 1 clone RP11-469A15, complete sequence Length = 165496 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ggaagcgggaggggaagggagagg 46 |||| ||||||||||||||||||| Sbjct: 33486 ggaaacgggaggggaagggagagg 33509
>gb|AC097065.2| Homo sapiens chromosome 1 clone RP11-532L16, complete sequence Length = 176861 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ggaagcgggaggggaagggagagg 46 |||| ||||||||||||||||||| Sbjct: 120844 ggaaacgggaggggaagggagagg 120867
>dbj|AK145843.1| Mus musculus 14 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I530005I10 product:peptidase 4, full insert sequence Length = 1884 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cagggtagcctcccacgtcg 254 |||||||||||||||||||| Sbjct: 1212 cagggtagcctcccacgtcg 1193
>dbj|AK168384.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:I920006D20 product:peptidase 4, full insert sequence Length = 1835 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cagggtagcctcccacgtcg 254 |||||||||||||||||||| Sbjct: 1171 cagggtagcctcccacgtcg 1152
>gb|AC008687.5| Homo sapiens chromosome 19 clone CTB-60B18, complete sequence Length = 157633 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ggaggggaagggagaggcag 49 |||||||||||||||||||| Sbjct: 64867 ggaggggaagggagaggcag 64886 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ggaggggaagggagaggcag 49 |||||||||||||||||||| Sbjct: 58280 ggaggggaagggagaggcag 58299 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 ggaggggaagggagaggcag 49 |||||||||||||||||||| Sbjct: 51364 ggaggggaagggagaggcag 51345 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 ggaggggaagggagaggcag 49 |||||||||||||||||||| Sbjct: 45210 ggaggggaagggagaggcag 45191 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ggaggggaagggagaggcag 49 |||||||||||||||||||| Sbjct: 40080 ggaggggaagggagaggcag 40099
>dbj|AK010581.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410024G15 product:peptidase 4, full insert sequence Length = 1832 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cagggtagcctcccacgtcg 254 |||||||||||||||||||| Sbjct: 1162 cagggtagcctcccacgtcg 1143
>gb|BC019723.1| Mus musculus Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6, mRNA (cDNA clone IMAGE:3994508), partial cds Length = 2708 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 gggaagcgggaggggaagggagag 45 |||||| ||||||||||||||||| Sbjct: 813 gggaagggggaggggaagggagag 790
>dbj|AK034924.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430063C07 product:unclassifiable, full insert sequence Length = 1902 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gaggggaagggagaggcagg 50 |||||||||||||||||||| Sbjct: 398 gaggggaagggagaggcagg 417
>gb|AC154395.4| Mus musculus chromosome 3, clone RP23-373G12, complete sequence Length = 255105 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 aatttgaattccagcatttt 376 |||||||||||||||||||| Sbjct: 237666 aatttgaattccagcatttt 237647
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ccctaccacccctcccctcgccgc 116 |||| ||||||||||||||||||| Sbjct: 3465769 ccctgccacccctcccctcgccgc 3465792
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cctcgcctcccgccgacgag 202 |||||||||||||||||||| Sbjct: 21412388 cctcgcctcccgccgacgag 21412407
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 agggaggcgacggaggtgga 231 |||||||||||||||||||| Sbjct: 10919506 agggaggcgacggaggtgga 10919487
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 ccctcgccgcgcacgatgag 126 |||||||||||||||||||| Sbjct: 3246398 ccctcgccgcgcacgatgag 3246379
>dbj|AP003140.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0025P13 Length = 133242 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 agggaggcgacggaggtgga 231 |||||||||||||||||||| Sbjct: 106522 agggaggcgacggaggtgga 106503
>dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0487H02 Length = 145491 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 agggaggcgacggaggtgga 231 |||||||||||||||||||| Sbjct: 22348 agggaggcgacggaggtgga 22329
>gb|AC108846.15| Mus musculus chromosome 9, clone RP23-12I4, complete sequence Length = 212729 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 gggaagcgggaggggaagggagag 45 |||||| ||||||||||||||||| Sbjct: 134964 gggaagggggaggggaagggagag 134987
>dbj|AP005156.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1729_E01 Length = 155527 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cctcgcctcccgccgacgag 202 |||||||||||||||||||| Sbjct: 56444 cctcgcctcccgccgacgag 56463
>emb|BX005175.8| Zebrafish DNA sequence from clone DKEY-14H17 in linkage group 11, complete sequence Length = 234851 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 tgaatttgaattccagcatt 374 |||||||||||||||||||| Sbjct: 187486 tgaatttgaattccagcatt 187505
>gb|AC115078.11| Mus musculus chromosome 3, clone RP24-457B22, complete sequence Length = 179789 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aatttgaattccagcatttt 376 |||||||||||||||||||| Sbjct: 156493 aatttgaattccagcatttt 156512
>dbj|AB113357.1| Sus scrofa 433 kb genomic segment, located between the non-classical and classical SLA class I gene cluster, clone: BAC 1111D10 Length = 114375 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ggaagcgggaggggaagggagagg 46 ||||||||||||||| |||||||| Sbjct: 69739 ggaagcgggaggggaggggagagg 69762
>dbj|AB113356.1| Sus scrofa 433 kb genomic segment, located between the non-classical and classical SLA class I gene cluster, clone: BAC 1051H9 Length = 146382 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ggaagcgggaggggaagggagagg 46 ||||||||||||||| |||||||| Sbjct: 28201 ggaagcgggaggggaggggagagg 28224
>emb|CR550305.7| Zebrafish DNA sequence from clone DKEY-205E15 in linkage group 11, complete sequence Length = 159061 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 tgaatttgaattccagcatt 374 |||||||||||||||||||| Sbjct: 3253 tgaatttgaattccagcatt 3272
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ccctaccacccctcccctcgccgc 116 |||| ||||||||||||||||||| Sbjct: 3465690 ccctgccacccctcccctcgccgc 3465713
>emb|AL645797.11| Mouse DNA sequence from clone RP23-153J5 on chromosome 11 Contains a novel gene and a CpG island, complete sequence Length = 190784 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 gtacccggccgcagctcccc 79 |||||||||||||||||||| Sbjct: 51573 gtacccggccgcagctcccc 51592
>ref|NM_152801.1| Mus musculus Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 (Arhgef6), mRNA Length = 4567 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 gggaagcgggaggggaagggagag 45 |||||| ||||||||||||||||| Sbjct: 2686 gggaagggggaggggaagggagag 2663
>gb|AC170997.2| Mus musculus BAC clone RP24-198N9 from chromosome 9, complete sequence Length = 146891 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 gggaagcgggaggggaagggagag 45 |||||| ||||||||||||||||| Sbjct: 1534 gggaagggggaggggaagggagag 1557
>gb|U51014.1|MMU51014 Mus musculus prolidase (pep4) mRNA, complete cds Length = 1876 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cagggtagcctcccacgtcg 254 |||||||||||||||||||| Sbjct: 1204 cagggtagcctcccacgtcg 1185
>emb|AL713885.1|CNS07YP2 Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 330D23 of library Caltech CITB-BAC from chromosome 11 of Mus musculus (mouse) Length = 181075 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 gtacccggccgcagctcccc 79 |||||||||||||||||||| Sbjct: 140530 gtacccggccgcagctcccc 140511
>emb|AL713884.1|CNS07YP1 Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 205M5 of library Caltech CITB-BAC from chromosome 11 of Mus musculus (mouse) Length = 120637 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 gtacccggccgcagctcccc 79 |||||||||||||||||||| Sbjct: 80096 gtacccggccgcagctcccc 80077
>emb|AL672128.8| Mouse DNA sequence from clone RP23-153G22 on chromosome X, complete sequence Length = 213937 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 gggaagcgggaggggaagggagag 45 |||||| ||||||||||||||||| Sbjct: 160015 gggaagggggaggggaagggagag 160038
>emb|AL663091.13| Mouse DNA sequence from clone RP23-392P11 on chromosome 2, complete sequence Length = 196078 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 gaggggaagggagaggcagg 50 |||||||||||||||||||| Sbjct: 62822 gaggggaagggagaggcagg 62803
>dbj|AB012869.1| Anguilla japonica mRNA for natriuretic peptide receptor-A, complete cds Length = 3896 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ggccgagggaggcgacggag 226 |||||||||||||||||||| Sbjct: 3264 ggccgagggaggcgacggag 3283
>dbj|D82983.1| Mus musculus mRNA for prolidase, complete cds Length = 1853 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cagggtagcctcccacgtcg 254 |||||||||||||||||||| Sbjct: 1168 cagggtagcctcccacgtcg 1149 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,293,055 Number of Sequences: 3902068 Number of extensions: 4293055 Number of successful extensions: 90700 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90221 Number of HSP's gapped (non-prelim): 479 length of query: 488 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 466 effective length of database: 17,147,199,772 effective search space: 7990595093752 effective search space used: 7990595093752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)