ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast17c12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 46 0.039
2gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 0.61
3emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 0.61
4gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 2.4
5ref|XM_479908.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.4
6ref|XM_507112.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 2.4
7ref|XM_463150.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.4
8gb|AC135500.4| Oryza sativa (japonica cultivar-group) chromosome... 40 2.4
9gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 40 2.4
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 2.4
11gb|AC025882.7| Homo sapiens chromosome 17, clone RP11-445F12, co... 40 2.4
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.4
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.4
14dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.4
15dbj|AK103321.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.4
16ref|XM_529758.1| PREDICTED: Pan troglodytes LOC453906 (LOC453906... 38 9.5
17gb|AC149084.5| Mus musculus BAC clone RP23-173A12 from chromosom... 38 9.5
18gb|AC131577.16| Mus musculus chromosome 1, clone RP23-23I4, comp... 38 9.5
19ref|XM_421633.1| PREDICTED: Gallus gallus similar to Hypothetica... 38 9.5
20ref|NM_021901.2| Mus musculus T-cell leukemia, homeobox 1 (Tlx1)... 38 9.5
21ref|XM_676057.1| Aspergillus nidulans FGSC A4 hypothetical prote... 38 9.5
22gb|AC091465.7| Mus musculus chromosome 1, clone RP23-221K1, comp... 38 9.5
23gb|AC145549.3| Mus musculus BAC clone RP23-21M23 from chromosome... 38 9.5
24emb|AL008628.1|HS140C12 Human DNA sequence from clone RP1-140C12... 38 9.5
25emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete ... 38 9.5
26emb|AJ251787.1|MMU251787 Mus musculus Hox11 gene for transcripti... 38 9.5
27gb|AE005742.1| Caulobacter crescentus CB15 section 68 of 359 of ... 38 9.5
28tpg|BK000772.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M147,... 38 9.5
29gb|AE012471.1| Xanthomonas campestris pv. campestris str. ATCC 3... 38 9.5
30gb|AF449411.1| Myxococcus xanthus cosmid pREG3E1, complete sequence 38 9.5
31gb|L21166.1|MUSHOMA03 Mouse DNA-binding nuclear transcription fa... 38 9.5
32gb|S70632.1|S70756S3 Tlx-1=homeobox gene HOX11 homolog [mice, Ge... 38 9.5
33emb|CR390909.1| Gallus gallus finished cDNA, clone ChEST399k1 38 9.5
34gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 38 9.5
35dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.5
36dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.5
37dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic D... 38 9.5
38ref|XM_574674.1| PREDICTED: Rattus norvegicus similar to transcr... 38 9.5
39dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 38 9.5
40dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.5
41dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.5
42dbj|AK108548.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 9.5
43ref|XM_306480.2| Anopheles gambiae str. PEST ENSANGP00000001727 ... 38 9.5
44gb|BC018246.1| Mus musculus T-cell leukemia, homeobox 1, mRNA (c... 38 9.5
45gb|AY103779.1| Zea mays PCO126548 mRNA sequence 38 9.5
46gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 38 9.5
47gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 38 9.5
48gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 38 9.5
49gb|AC170878.4| Mus musculus BAC clone RP24-226F17 from chromosom... 38 9.5 
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 46.1 bits (23), Expect = 0.039
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 48      cgctcccgccgcgcatgcgcccgccga 74
               ||||||||||||||| |||||||||||
Sbjct: 1426297 cgctcccgccgcgcaggcgcccgccga 1426271
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 57     cgcgcatgcgcccgccgacgg 77
              |||||||||||||||||||||
Sbjct: 176382 cgcgcatgcgcccgccgacgg 176402
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 57      cgcgcatgcgcccgccgacgg 77
               |||||||||||||||||||||
Sbjct: 1571878 cgcgcatgcgcccgccgacgg 1571898
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 113     cgccagcggctgggccaggc 132
               ||||||||||||||||||||
Sbjct: 1797136 cgccagcggctgggccaggc 1797117
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>ref|XM_479908.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 890

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 37  accacccctcccgctcccgc 56
           ||||||||||||||||||||
Sbjct: 295 accacccctcccgctcccgc 276
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>ref|XM_507112.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1163_G08.30
           mRNA
          Length = 1003

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 37  accacccctcccgctcccgc 56
           ||||||||||||||||||||
Sbjct: 296 accacccctcccgctcccgc 277
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>ref|XM_463150.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1320

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   accacccctcccgctcccgc 56
            ||||||||||||||||||||
Sbjct: 1047 accacccctcccgctcccgc 1066
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>gb|AC135500.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0034J04
             map S1466, complete sequence
          Length = 140012

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    accacccctcccgctcccgc 56
             ||||||||||||||||||||
Sbjct: 62795 accacccctcccgctcccgc 62776
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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 52    cccgccgcgcatgcgcccgccgac 75
             |||||||||| |||||||||||||
Sbjct: 21249 cccgccgcgcctgcgcccgccgac 21272
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 37       accacccctcccgctcccgc 56
                ||||||||||||||||||||
Sbjct: 22792864 accacccctcccgctcccgc 22792845
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>gb|AC025882.7| Homo sapiens chromosome 17, clone RP11-445F12, complete sequence
          Length = 181991

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    ccacccctcccgctcccgcc 57
             ||||||||||||||||||||
Sbjct: 55286 ccacccctcccgctcccgcc 55305
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 37      accacccctcccgctcccgc 56
               ||||||||||||||||||||
Sbjct: 1583568 accacccctcccgctcccgc 1583587
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 37       accacccctcccgctcccgc 56
                ||||||||||||||||||||
Sbjct: 22785892 accacccctcccgctcccgc 22785873
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>dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1163_G08
          Length = 150676

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     accacccctcccgctcccgc 56
              ||||||||||||||||||||
Sbjct: 111056 accacccctcccgctcccgc 111075
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>dbj|AK103321.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125J05, full
           insert sequence
          Length = 1001

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 37  accacccctcccgctcccgc 56
           ||||||||||||||||||||
Sbjct: 296 accacccctcccgctcccgc 277
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>ref|XM_529758.1| PREDICTED: Pan troglodytes LOC453906 (LOC453906), mRNA
          Length = 666

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 38  ccacccctcccgctcccgc 56
           |||||||||||||||||||
Sbjct: 386 ccacccctcccgctcccgc 404
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>gb|AC149084.5| Mus musculus BAC clone RP23-173A12 from chromosome 19, complete sequence
          Length = 188848

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 116    cagcggctgggccaggctc 134
              |||||||||||||||||||
Sbjct: 144271 cagcggctgggccaggctc 144253
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>gb|AC131577.16| Mus musculus chromosome 1, clone RP23-23I4, complete sequence
          Length = 234224

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 94     ggccggcccgccgcctccgcgcc 116
              ||||||||||||||| |||||||
Sbjct: 135695 ggccggcccgccgcccccgcgcc 135717
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>ref|XM_421633.1| PREDICTED: Gallus gallus similar to Hypothetical protein MGC66242
            (LOC423759), mRNA
          Length = 1447

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 28   gcagcagcaaccacccctc 46
            |||||||||||||||||||
Sbjct: 1334 gcagcagcaaccacccctc 1316
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>ref|NM_021901.2| Mus musculus T-cell leukemia, homeobox 1 (Tlx1), mRNA
          Length = 2067

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 116  cagcggctgggccaggctc 134
            |||||||||||||||||||
Sbjct: 1083 cagcggctgggccaggctc 1065
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>ref|XM_676057.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7880.2), mRNA
          Length = 4980

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 41  cccctcccgctcccgccgc 59
           |||||||||||||||||||
Sbjct: 410 cccctcccgctcccgccgc 428
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>gb|AC091465.7| Mus musculus chromosome 1, clone RP23-221K1, complete sequence
          Length = 199109

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 94    ggccggcccgccgcctccgcgcc 116
             ||||||||||||||| |||||||
Sbjct: 10716 ggccggcccgccgcccccgcgcc 10738
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>gb|AC145549.3| Mus musculus BAC clone RP23-21M23 from chromosome 19, complete sequence
          Length = 247655

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 116    cagcggctgggccaggctc 134
              |||||||||||||||||||
Sbjct: 203030 cagcggctgggccaggctc 203012
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>emb|AL008628.1|HS140C12 Human DNA sequence from clone RP1-140C12 on chromosome 6q26-27
             ContaiContains the 3' end of the gene for KIAA1838 and 2
             CpG islands, complete sequence
          Length = 143096

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 29    cagcagcaaccacccctcc 47
             |||||||||||||||||||
Sbjct: 95633 cagcagcaaccacccctcc 95651
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>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29
          Length = 314100

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 98     ggcccgccgcctccgcgcc 116
              |||||||||||||||||||
Sbjct: 157418 ggcccgccgcctccgcgcc 157400
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>emb|AJ251787.1|MMU251787 Mus musculus Hox11 gene for transcription factor, exons 1-3
          Length = 10246

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 116  cagcggctgggccaggctc 134
            |||||||||||||||||||
Sbjct: 9449 cagcggctgggccaggctc 9431
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>gb|AE005742.1| Caulobacter crescentus CB15 section 68 of 359 of the complete genome
          Length = 12842

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 115  ccagcggctgggccaggct 133
            |||||||||||||||||||
Sbjct: 3380 ccagcggctgggccaggct 3398
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>tpg|BK000772.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M147, complete sequence
          Length = 1072

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 99  gcccgccgcctccgcgcca 117
           |||||||||||||||||||
Sbjct: 515 gcccgccgcctccgcgcca 497
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>gb|AE012471.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 379
            of 460 of the complete genome
          Length = 10154

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 55   gccgcgcatgcgcccgccg 73
            |||||||||||||||||||
Sbjct: 7410 gccgcgcatgcgcccgccg 7392
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>gb|AF449411.1| Myxococcus xanthus cosmid pREG3E1, complete sequence
          Length = 36615

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 99    gcccgccgcctccgcgcca 117
             |||||||||||||||||||
Sbjct: 26080 gcccgccgcctccgcgcca 26098
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>gb|L21166.1|MUSHOMA03 Mouse DNA-binding nuclear transcription factor (hox11) gene, exon 3
          Length = 268

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 116 cagcggctgggccaggctc 134
           |||||||||||||||||||
Sbjct: 119 cagcggctgggccaggctc 101
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>gb|S70632.1|S70756S3 Tlx-1=homeobox gene HOX11 homolog [mice, Genomic, 771 nt, segment 3
           of 3]
          Length = 771

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 116 cagcggctgggccaggctc 134
           |||||||||||||||||||
Sbjct: 174 cagcggctgggccaggctc 156
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>emb|CR390909.1| Gallus gallus finished cDNA, clone ChEST399k1
          Length = 1258

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 28   gcagcagcaaccacccctc 46
            |||||||||||||||||||
Sbjct: 1144 gcagcagcaaccacccctc 1126
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 55     gccgcgcatgcgcccgccg 73
              |||||||||||||||||||
Sbjct: 772725 gccgcgcatgcgcccgccg 772743
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 98       ggcccgccgcctccgcgcc 116
                |||||||||||||||||||
Sbjct: 24080593 ggcccgccgcctccgcgcc 24080611
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 99       gcccgccgcctccgcgcca 117
                |||||||||||||||||||
Sbjct: 31862478 gcccgccgcctccgcgcca 31862460
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>dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1131G08
          Length = 158241

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 99    gcccgccgcctccgcgcca 117
             |||||||||||||||||||
Sbjct: 48556 gcccgccgcctccgcgcca 48538
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>ref|XM_574674.1| PREDICTED: Rattus norvegicus similar to transcription factor
            (LOC499361), mRNA
          Length = 2481

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 116  cagcggctgggccaggctc 134
            |||||||||||||||||||
Sbjct: 1563 cagcggctgggccaggctc 1545
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 56     ccgcgcatgcgcccgccga 74
              |||||||||||||||||||
Sbjct: 941619 ccgcgcatgcgcccgccga 941601
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>dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0417G12
          Length = 163568

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 98    ggcccgccgcctccgcgcc 116
             |||||||||||||||||||
Sbjct: 14051 ggcccgccgcctccgcgcc 14069
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>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0429G06
          Length = 158321

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 98    ggcccgccgcctccgcgcc 116
             |||||||||||||||||||
Sbjct: 90286 ggcccgccgcctccgcgcc 90304
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>dbj|AK108548.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-E01, full
           insert sequence
          Length = 890

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 37  accacccctcccgctcccg 55
           |||||||||||||||||||
Sbjct: 295 accacccctcccgctcccg 277
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>ref|XM_306480.2| Anopheles gambiae str. PEST ENSANGP00000001727
           (ENSANGG00000001446), partial mRNA
          Length = 900

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 112 gcgccagcggctgggccaggctc 134
           |||||||||||||| ||||||||
Sbjct: 439 gcgccagcggctggcccaggctc 417
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>gb|BC018246.1| Mus musculus T-cell leukemia, homeobox 1, mRNA (cDNA clone MGC:19305
            IMAGE:4164519), complete cds
          Length = 2067

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 116  cagcggctgggccaggctc 134
            |||||||||||||||||||
Sbjct: 1083 cagcggctgggccaggctc 1065
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>gb|AY103779.1| Zea mays PCO126548 mRNA sequence
          Length = 2333

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 44  ctcccgctcccgccgcgca 62
           |||||||||||||||||||
Sbjct: 202 ctcccgctcccgccgcgca 220
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 64      gcgcccgccgacggaccgc 82
               |||||||||||||||||||
Sbjct: 1235958 gcgcccgccgacggaccgc 1235940
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 102     cgccgcctccgcgccagcg 120
               |||||||||||||||||||
Sbjct: 1671587 cgccgcctccgcgccagcg 1671605
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 138    ggccgttccgcgcggcggaggaa 160
              |||||| ||||||||||||||||
Sbjct: 875033 ggccgtcccgcgcggcggaggaa 875055
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>gb|AC170878.4| Mus musculus BAC clone RP24-226F17 from chromosome 19, complete
             sequence
          Length = 148454

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 116   cagcggctgggccaggctc 134
             |||||||||||||||||||
Sbjct: 82031 cagcggctgggccaggctc 82013


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,405,135
Number of Sequences: 3902068
Number of extensions: 1405135
Number of successful extensions: 133721
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 131259
Number of HSP's gapped (non-prelim): 2462
length of query: 191
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 169
effective length of database: 17,147,199,772
effective search space: 2897876761468
effective search space used: 2897876761468
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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