ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast17a09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_465939.1| Oryza sativa (japonica cultivar-group), mRNA 161 2e-36
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 161 2e-36
3dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic D... 161 2e-36
4dbj|AK111241.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 2e-36
5dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 119 5e-24
6dbj|AK064775.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 5e-24
7gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 119 5e-24
8emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb... 119 5e-24
9emb|AL928752.2|CNS08CBP Oryza sativa chromosome 12, . BAC OSJNBb... 119 5e-24
10dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
11dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
12dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
13dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 44 0.25
14gb|AF491307.2| Pseudomonas putida NCIB 9816-4 plasmid pDTG1, com... 42 0.98
15gb|AY208917.2| Pseudomonas sp. ND6 plasmid pND6-1, complete sequ... 42 0.98
16gb|AC094105.3| Homo sapiens chromosome 5 clone RP11-468D11, comp... 42 0.98
17emb|AL928772.8| Mouse DNA sequence from clone RP23-247I15 on chr... 42 0.98
18ref|XM_511712.1| PREDICTED: Pan troglodytes pleckstrin homology,... 40 3.9
19ref|XM_477464.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.9
20gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 3.9
21ref|NM_017456.1| Homo sapiens pleckstrin homology, Sec7 and coil... 40 3.9
22ref|NM_004762.1| Homo sapiens pleckstrin homology, Sec7 and coil... 40 3.9
23gb|AC135311.13| Medicago truncatula clone mth2-27l9, complete se... 40 3.9
24emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome... 40 3.9
25emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 3.9
26gb|AC099804.3| Homo sapiens chromosome 17, clone CTD-2357A8, com... 40 3.9
27gb|BC038385.1| Homo sapiens pleckstrin homology, Sec7 and coiled... 40 3.9
28gb|AF443600.1|AF443600 Oryza sativa endo-1,3-beta-glucanase mRNA... 40 3.9
29gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 3.9
30dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.9
31dbj|AP005189.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.9
32dbj|AP004309.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.9
33gb|AF125361.1|F125350S12 Homo sapiens cytohesin 1 gene, exon 13 40 3.9
34dbj|AK108656.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.9
35gb|BC050452.1| Homo sapiens pleckstrin homology, Sec7 and coiled... 40 3.9
36gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 3.9
37gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 3.9
38gb|AF030166.1|AF030166 Oryza sativa glucanase (glu1) mRNA, compl... 40 3.9
39gb|AD000012.1|MSGY126 Mycobacterium tuberculosis sequence from c... 40 3.9
40gb|U60588.1|MTU60588 Mycobacterium tuberculosis enoyl-CoA hydrat... 40 3.9
41gb|M85169.1|HUMSEC7HOM Human homologue of yeast sec7 mRNA, compl... 40 3.9
42dbj|AB022021.1| Chlorocebus aethiops mRNA for cytohesin-1, compl... 40 3.9 
>ref|XM_465939.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 674

 Score =  161 bits (81), Expect = 2e-36
 Identities = 126/141 (89%)
 Strand = Plus / Plus

                                                                       
Query: 156 cgtgccgggcggcggacctggtggtgcggcagtcggcgacggggcgggtggtggagggga 215
           ||||| ||||||||||  |||||||| |||||  ||||||||||||||||||||||||||
Sbjct: 136 cgtgcagggcggcggatttggtggtgaggcagagggcgacggggcgggtggtggagggga 195

                                                                       
Query: 216 agccggagtacgcggtggagctgaccaaccgctgccggtgcgcgcagtccagggtgctgc 275
           |||||||||||||||||||| || | ||||| ||||||||||||||||| |||||| |||
Sbjct: 196 agccggagtacgcggtggaggtggcgaaccggtgccggtgcgcgcagtcgagggtggtgc 255

                                
Query: 276 tccgctgctacggcctcagca 296
           | || |||||||| |||||||
Sbjct: 256 tgcgatgctacgggctcagca 276
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  161 bits (81), Expect = 2e-36
 Identities = 126/141 (89%)
 Strand = Plus / Plus

                                                                            
Query: 156      cgtgccgggcggcggacctggtggtgcggcagtcggcgacggggcgggtggtggagggga 215
                ||||| ||||||||||  |||||||| |||||  ||||||||||||||||||||||||||
Sbjct: 18435031 cgtgcagggcggcggatttggtggtgaggcagagggcgacggggcgggtggtggagggga 18435090

                                                                            
Query: 216      agccggagtacgcggtggagctgaccaaccgctgccggtgcgcgcagtccagggtgctgc 275
                |||||||||||||||||||| || | ||||| ||||||||||||||||| |||||| |||
Sbjct: 18435091 agccggagtacgcggtggaggtggcgaaccggtgccggtgcgcgcagtcgagggtggtgc 18435150

                                     
Query: 276      tccgctgctacggcctcagca 296
                | || |||||||| |||||||
Sbjct: 18435151 tgcgatgctacgggctcagca 18435171
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>dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0001A11
          Length = 153252

 Score =  161 bits (81), Expect = 2e-36
 Identities = 126/141 (89%)
 Strand = Plus / Plus

                                                                         
Query: 156   cgtgccgggcggcggacctggtggtgcggcagtcggcgacggggcgggtggtggagggga 215
             ||||| ||||||||||  |||||||| |||||  ||||||||||||||||||||||||||
Sbjct: 97955 cgtgcagggcggcggatttggtggtgaggcagagggcgacggggcgggtggtggagggga 98014

                                                                         
Query: 216   agccggagtacgcggtggagctgaccaaccgctgccggtgcgcgcagtccagggtgctgc 275
             |||||||||||||||||||| || | ||||| ||||||||||||||||| |||||| |||
Sbjct: 98015 agccggagtacgcggtggaggtggcgaaccggtgccggtgcgcgcagtcgagggtggtgc 98074

                                  
Query: 276   tccgctgctacggcctcagca 296
             | || |||||||| |||||||
Sbjct: 98075 tgcgatgctacgggctcagca 98095
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>dbj|AK111241.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-C12, full
           insert sequence
          Length = 674

 Score =  161 bits (81), Expect = 2e-36
 Identities = 126/141 (89%)
 Strand = Plus / Plus

                                                                       
Query: 156 cgtgccgggcggcggacctggtggtgcggcagtcggcgacggggcgggtggtggagggga 215
           ||||| ||||||||||  |||||||| |||||  ||||||||||||||||||||||||||
Sbjct: 136 cgtgcagggcggcggatttggtggtgaggcagagggcgacggggcgggtggtggagggga 195

                                                                       
Query: 216 agccggagtacgcggtggagctgaccaaccgctgccggtgcgcgcagtccagggtgctgc 275
           |||||||||||||||||||| || | ||||| ||||||||||||||||| |||||| |||
Sbjct: 196 agccggagtacgcggtggaggtggcgaaccggtgccggtgcgcgcagtcgagggtggtgc 255

                                
Query: 276 tccgctgctacggcctcagca 296
           | || |||||||| |||||||
Sbjct: 256 tgcgatgctacgggctcagca 276
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  119 bits (60), Expect = 5e-24
 Identities = 90/100 (90%)
 Strand = Plus / Plus

                                                                           
Query: 156     cgtgccgggcggcggacctggtggtgcggcagtcggcgacggggcgggtggtggagggga 215
               ||||| ||||||||||  |||||||| |||||  ||||||||||||||||||||||||||
Sbjct: 1882007 cgtgcagggcggcggatttggtggtgaggcagagggcgacggggcgggtggtggagggga 1882066

                                                       
Query: 216     agccggagtacgcggtggagctgaccaaccgctgccggtg 255
               |||||||||||||||||||| || | ||||| ||||||||
Sbjct: 1882067 agccggagtacgcggtggaggtggcgaaccgttgccggtg 1882106
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>dbj|AK064775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A24, full
           insert sequence
          Length = 3358

 Score =  119 bits (60), Expect = 5e-24
 Identities = 90/100 (90%)
 Strand = Plus / Plus

                                                                       
Query: 156 cgtgccgggcggcggacctggtggtgcggcagtcggcgacggggcgggtggtggagggga 215
           ||||| ||||||||||  |||||||| |||||  ||||||||||||||||||||||||||
Sbjct: 284 cgtgcagggcggcggatttggtggtgaggcagagggcgacggggcgggtggtggagggga 343

                                                   
Query: 216 agccggagtacgcggtggagctgaccaaccgctgccggtg 255
           |||||||||||||||||||| || | ||||| ||||||||
Sbjct: 344 agccggagtacgcggtggaggtggcgaaccgttgccggtg 383
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  119 bits (60), Expect = 5e-24
 Identities = 90/100 (90%)
 Strand = Plus / Plus

                                                                           
Query: 156     cgtgccgggcggcggacctggtggtgcggcagtcggcgacggggcgggtggtggagggga 215
               ||||| ||||||||||  |||||||| |||||  ||||||||||||||||||||||||||
Sbjct: 1881958 cgtgcagggcggcggatttggtggtgaggcagagggcgacggggcgggtggtggagggga 1882017

                                                       
Query: 216     agccggagtacgcggtggagctgaccaaccgctgccggtg 255
               |||||||||||||||||||| || | ||||| ||||||||
Sbjct: 1882018 agccggagtacgcggtggaggtggcgaaccgttgccggtg 1882057
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>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 128619

 Score =  119 bits (60), Expect = 5e-24
 Identities = 90/100 (90%)
 Strand = Plus / Plus

                                                                         
Query: 156   cgtgccgggcggcggacctggtggtgcggcagtcggcgacggggcgggtggtggagggga 215
             ||||| ||||||||||  |||||||| |||||  ||||||||||||||||||||||||||
Sbjct: 76698 cgtgcagggcggcggatttggtggtgaggcagagggcgacggggcgggtggtggagggga 76757

                                                     
Query: 216   agccggagtacgcggtggagctgaccaaccgctgccggtg 255
             |||||||||||||||||||| || | ||||| ||||||||
Sbjct: 76758 agccggagtacgcggtggaggtggcgaaccgttgccggtg 76797
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>emb|AL928752.2|CNS08CBP Oryza sativa chromosome 12, . BAC OSJNBb0034E23 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 107247

 Score =  119 bits (60), Expect = 5e-24
 Identities = 90/100 (90%)
 Strand = Plus / Minus

                                                                         
Query: 156   cgtgccgggcggcggacctggtggtgcggcagtcggcgacggggcgggtggtggagggga 215
             ||||| ||||||||||  |||||||| |||||  ||||||||||||||||||||||||||
Sbjct: 86214 cgtgcagggcggcggatttggtggtgaggcagagggcgacggggcgggtggtggagggga 86155

                                                     
Query: 216   agccggagtacgcggtggagctgaccaaccgctgccggtg 255
             |||||||||||||||||||| || | ||||| ||||||||
Sbjct: 86154 agccggagtacgcggtggaggtggcgaaccgttgccggtg 86115
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                         
Query: 193      gacggggcgggtggtggaggggaagccggagtacgcggtgg 233
                |||||||  ||||||||||||| |||||||||||| |||||
Sbjct: 24532844 gacggggaaggtggtggaggggcagccggagtacgaggtgg 24532884
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>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0040H10
          Length = 173301

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 193   gacggggcgggtggtggaggggaagccggagtacgcggtgg 233
             |||||||  ||||||||||||| |||||||||||| |||||
Sbjct: 16037 gacggggaaggtggtggaggggcagccggagtacgaggtgg 16077
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>dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0012B02
          Length = 149807

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                       
Query: 193    gacggggcgggtggtggaggggaagccggagtacgcggtgg 233
              |||||||  ||||||||||||| |||||||||||| |||||
Sbjct: 144317 gacggggaaggtggtggaggggcagccggagtacgaggtgg 144357
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 153     cgccgtgccgggcggcggacctggtg 178
               ||||||||||||||| ||||||||||
Sbjct: 4865582 cgccgtgccgggcggtggacctggtg 4865607
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>gb|AF491307.2| Pseudomonas putida NCIB 9816-4 plasmid pDTG1, complete sequence
          Length = 83042

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 233   gagctgaccaaccgctgccgg 253
             |||||||||||||||||||||
Sbjct: 35852 gagctgaccaaccgctgccgg 35872
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>gb|AY208917.2| Pseudomonas sp. ND6 plasmid pND6-1, complete sequence
          Length = 101858

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 233   gagctgaccaaccgctgccgg 253
             |||||||||||||||||||||
Sbjct: 75657 gagctgaccaaccgctgccgg 75677
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>gb|AC094105.3| Homo sapiens chromosome 5 clone RP11-468D11, complete sequence
          Length = 186314

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 202    ggtggtggaggggaagccgga 222
              |||||||||||||||||||||
Sbjct: 120492 ggtggtggaggggaagccgga 120472
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>emb|AL928772.8| Mouse DNA sequence from clone RP23-247I15 on chromosome 4 Contains the 3'
              end of a novel gene and a novel gene, complete sequence
          Length = 174731

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 60     tggcgagccaagccttcctgt 80
              |||||||||||||||||||||
Sbjct: 113758 tggcgagccaagccttcctgt 113738
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>ref|XM_511712.1| PREDICTED: Pan troglodytes pleckstrin homology, Sec7 and coiled/coil
            domains 1 (LOC454926), mRNA
          Length = 1729

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 197  gggcgggtggtggaggggaa 216
            ||||||||||||||||||||
Sbjct: 1193 gggcgggtggtggaggggaa 1212
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>ref|XM_477464.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1125

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 174 tggtggtgcggcagtcggcgacgg 197
           |||||||||||||||||| |||||
Sbjct: 596 tggtggtgcggcagtcggagacgg 619
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 178     ggtgcggcagtcggcgacgg 197
               ||||||||||||||||||||
Sbjct: 4211494 ggtgcggcagtcggcgacgg 4211475
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>ref|NM_017456.1| Homo sapiens pleckstrin homology, Sec7 and coiled-coil domains
            1(cytohesin 1) (PSCD1), transcript variant 2, mRNA
          Length = 3308

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 197  gggcgggtggtggaggggaa 216
            ||||||||||||||||||||
Sbjct: 1099 gggcgggtggtggaggggaa 1118
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>ref|NM_004762.1| Homo sapiens pleckstrin homology, Sec7 and coiled-coil domains
            1(cytohesin 1) (PSCD1), transcript variant 1, mRNA
          Length = 3311

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 197  gggcgggtggtggaggggaa 216
            ||||||||||||||||||||
Sbjct: 1102 gggcgggtggtggaggggaa 1121
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>gb|AC135311.13| Medicago truncatula clone mth2-27l9, complete sequence
          Length = 112635

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    agctagctgcaactgcaagc 47
             ||||||||||||||||||||
Sbjct: 38845 agctagctgcaactgcaagc 38826
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>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13
          Length = 244800

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   ggtgcggcagtcggcgacgg 197
             ||||||||||||||||||||
Sbjct: 52449 ggtgcggcagtcggcgacgg 52430
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>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             14/14
          Length = 278492

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   ggtgcggcagtcggcgacgg 197
             ||||||||||||||||||||
Sbjct: 88476 ggtgcggcagtcggcgacgg 88457
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>gb|AC099804.3| Homo sapiens chromosome 17, clone CTD-2357A8, complete sequence
          Length = 119922

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   gggcgggtggtggaggggaa 216
             ||||||||||||||||||||
Sbjct: 72948 gggcgggtggtggaggggaa 72929
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>gb|BC038385.1| Homo sapiens pleckstrin homology, Sec7 and coiled-coil domains
            1(cytohesin 1), transcript variant 1, mRNA (cDNA clone
            MGC:21351 IMAGE:4755203), complete cds
          Length = 3302

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 197  gggcgggtggtggaggggaa 216
            ||||||||||||||||||||
Sbjct: 1073 gggcgggtggtggaggggaa 1092
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>gb|AF443600.1|AF443600 Oryza sativa endo-1,3-beta-glucanase mRNA, complete cds
          Length = 1276

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   agctagctgcaactgcaagc 47
            ||||||||||||||||||||
Sbjct: 1118 agctagctgcaactgcaagc 1137
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 185    cagtcggcgacggggcgggtggtg 208
              ||||||||||||| ||||||||||
Sbjct: 374624 cagtcggcgacggagcgggtggtg 374601
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 29       gctagctgcaactgcaagcc 48
                ||||||||||||||||||||
Sbjct: 25537021 gctagctgcaactgcaagcc 25537002



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 174      tggtggtgcggcagtcggcgacgg 197
                |||||||||||||||||| |||||
Sbjct: 10669214 tggtggtgcggcagtcggagacgg 10669237
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>dbj|AP005189.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0474B11
          Length = 141702

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 174    tggtggtgcggcagtcggcgacgg 197
              |||||||||||||||||| |||||
Sbjct: 111878 tggtggtgcggcagtcggagacgg 111901
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>dbj|AP004309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0560B08
          Length = 128098

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    gctagctgcaactgcaagcc 48
             ||||||||||||||||||||
Sbjct: 74291 gctagctgcaactgcaagcc 74272
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>gb|AF125361.1|F125350S12 Homo sapiens cytohesin 1 gene, exon 13
          Length = 399

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 197 gggcgggtggtggaggggaa 216
           ||||||||||||||||||||
Sbjct: 140 gggcgggtggtggaggggaa 159
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>dbj|AK108656.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-E06, full
           insert sequence
          Length = 1740

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 174 tggtggtgcggcagtcggcgacgg 197
           |||||||||||||||||| |||||
Sbjct: 613 tggtggtgcggcagtcggagacgg 636
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>gb|BC050452.1| Homo sapiens pleckstrin homology, Sec7 and coiled-coil domains
            1(cytohesin 1), transcript variant 1, mRNA (cDNA clone
            MGC:54241 IMAGE:6043039), complete cds
          Length = 3301

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 197  gggcgggtggtggaggggaa 216
            ||||||||||||||||||||
Sbjct: 1062 gggcgggtggtggaggggaa 1081
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 143     gcgggcgggacgccgtgccgggcggcggacct 174
               ||||||| ||||||| ||||||||||| ||||
Sbjct: 1916958 gcgggcgcgacgccgggccgggcggcgcacct 1916989
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 178    ggtgcggcagtcggcgacgg 197
              ||||||||||||||||||||
Sbjct: 270940 ggtgcggcagtcggcgacgg 270959
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>gb|AF030166.1|AF030166 Oryza sativa glucanase (glu1) mRNA, complete cds
          Length = 1240

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   agctagctgcaactgcaagc 47
            ||||||||||||||||||||
Sbjct: 1138 agctagctgcaactgcaagc 1157
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>gb|AD000012.1|MSGY126 Mycobacterium tuberculosis sequence from clone y126
          Length = 37164

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 178  ggtgcggcagtcggcgacgg 197
            ||||||||||||||||||||
Sbjct: 5832 ggtgcggcagtcggcgacgg 5813
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>gb|U60588.1|MTU60588 Mycobacterium tuberculosis enoyl-CoA hydratase (ech) and esterase
           (est) genes, complete cds
          Length = 3529

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 178 ggtgcggcagtcggcgacgg 197
           ||||||||||||||||||||
Sbjct: 572 ggtgcggcagtcggcgacgg 553
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>gb|M85169.1|HUMSEC7HOM Human homologue of yeast sec7 mRNA, complete cds
          Length = 3311

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 197  gggcgggtggtggaggggaa 216
            ||||||||||||||||||||
Sbjct: 1102 gggcgggtggtggaggggaa 1121
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>dbj|AB022021.1| Chlorocebus aethiops mRNA for cytohesin-1, complete cds
          Length = 1197

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 197  gggcgggtggtggaggggaa 216
            ||||||||||||||||||||
Sbjct: 1033 gggcgggtggtggaggggaa 1052


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,832,095
Number of Sequences: 3902068
Number of extensions: 1832095
Number of successful extensions: 40137
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39568
Number of HSP's gapped (non-prelim): 569
length of query: 296
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 274
effective length of database: 17,147,199,772
effective search space: 4698332737528
effective search space used: 4698332737528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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