Clone Information

BLAST Search Result

Clone Name	bast16h03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL12_ARATH (P50883) 60S ribosomal protein L12	196	1e-50
2	RL12_PRUAR (O50003) 60S ribosomal protein L12	193	9e-50
3	RL12_CHLRE (P50884) 60S ribosomal protein L12 (Fragment)	169	2e-42
4	RL12_RAT (P23358) 60S ribosomal protein L12	163	1e-40
5	RL12_MOUSE (P35979) 60S ribosomal protein L12	161	3e-40
6	RL12_HUMAN (P30050) 60S ribosomal protein L12	161	4e-40
7	RL12_CHILA (Q6QMZ7) 60S ribosomal protein L12	161	4e-40
8	RL12_BOVIN (P61284) 60S ribosomal protein L12	161	4e-40
9	RL12_SCHPO (O75000) 60S ribosomal protein L12	159	2e-39
10	RL12_CAEEL (P61866) 60S ribosomal protein L12	157	6e-39
11	RL12_CAEBR (P61865) 60S ribosomal protein L12	157	6e-39
12	RL12_NEUCR (Q9C285) 60S ribosomal protein L12	157	7e-39
13	RL12_YEAST (P17079) 60S ribosomal protein L12 (L15) (YL23)	147	6e-36
14	RL12_ENCCU (Q8SR84) 60S ribosomal protein L12	102	2e-22
15	RL11_PYRFU (Q8TZK0) 50S ribosomal protein L11P	51	6e-07
16	RL11_PYRKO (Q5JH34) 50S ribosomal protein L11P	50	1e-06
17	RL11_ARCFU (O29712) 50S ribosomal protein L11P	50	1e-06
18	RL11_METJA (P54030) 50S ribosomal protein L11P	50	1e-06
19	RL11_METKA (Q8TX52) 50S ribosomal protein L11P	49	2e-06
20	RL11_PYRHO (O57779) 50S ribosomal protein L11P	47	1e-05
21	RL11_PYRAB (Q9V2S3) 50S ribosomal protein L11P	47	1e-05
22	RL11_METTH (O27715) 50S ribosomal protein L11P	46	2e-05
23	RL11_METMP (P62445) 50S ribosomal protein L11P	46	2e-05
24	RL11_METMA (Q8PY53) 50S ribosomal protein L11P	45	3e-05
25	RL11_METAC (Q8TI82) 50S ribosomal protein L11P	45	3e-05
26	RL11_THEAC (Q9HL70) 50S ribosomal protein L11P	45	4e-05
27	RL11_THEVO (Q97BN1) 50S ribosomal protein L11P	43	2e-04
28	RL11_PICTO (Q6L1Y0) 50S ribosomal protein L11P	43	2e-04
29	RL11_SULSO (P96037) 50S ribosomal protein L11P	41	8e-04
30	RL11_SULTO (Q971J0) 50S ribosomal protein L11P	39	0.003
31	RL11_SULAC (P35025) 50S ribosomal protein L11P	39	0.004
32	RL11_HALMA (P14122) 50S ribosomal protein L11P (Hmal11)	30	1.4
33	RS20_BRAJA (Q89W61) 30S ribosomal protein S20	30	1.8
34	RL11_HALVO (P41200) 50S ribosomal protein L11P (L11E)	30	1.8
35	RL11_THETN (Q8R7U2) 50S ribosomal protein L11	29	2.4
36	MAP1B_RAT (P15205) Microtubule-associated protein 1B (MAP 1B) (N...	29	2.4
37	RL2_SHEON (Q8EK65) 50S ribosomal protein L2	29	3.1
38	RL11_BORGA (Q661M5) 50S ribosomal protein L11	29	3.1
39	RL11_BORBU (O51354) 50S ribosomal protein L11	29	3.1
40	RL2_BACSU (P42919) 50S ribosomal protein L2 (BL2)	28	4.0
41	RL11_HALSA (P05969) 50S ribosomal protein L11P	28	4.0
42	MAP1B_MOUSE (P14873) Microtubule-associated protein 1B (MAP 1B) ...	28	4.0
43	MRAW_HELPJ (Q9ZLD4) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)	28	5.3
44	RL2_NEIMA (Q9JX12) 50S ribosomal protein L2	28	5.3
45	LPXD_PORGI (Q7MXT7) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-a...	28	6.9
46	SRCH_HUMAN (P23327) Sarcoplasmic reticulum histidine-rich calciu...	28	6.9
47	RL2_NEIMB (Q9K1I5) 50S ribosomal protein L2	28	6.9
48	RL2_CHRVO (Q7NQF5) 50S ribosomal protein L2	28	6.9
49	ATC1_YEAST (P13586) Calcium-transporting ATPase 1 (EC 3.6.3.8) (...	27	9.0
50	MURG_MYCTU (O06224) UDP-N-acetylglucosamine--N-acetylmuramyl-(pe...	27	9.0
51	MURG_MYCBO (Q7VEP8) UDP-N-acetylglucosamine--N-acetylmuramyl-(pe...	27	9.0
52	PCIF1_HUMAN (Q9H4Z3) Phosphorylated CTD-interacting factor 1	27	9.0

>RL12_ARATH (P50883) 60S ribosomal protein L12|
          Length = 166

 Score =  196 bits (498), Expect = 1e-50
 Identities = 98/105 (93%), Positives = 104/105 (99%)
 Frame = +1

Query: 85  KLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 264
           KLDPSQ+V+VYVRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVTVKL
Sbjct: 4   KLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKL 63

Query: 265 TVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNGNISLD 399
           TVQNRQAKV+VVPSAAALVIK+LKEPERDRKKVKNIKHNGNIS D
Sbjct: 64  TVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFD 108

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>RL12_PRUAR (O50003) 60S ribosomal protein L12|
          Length = 166

 Score =  193 bits (490), Expect = 9e-50
 Identities = 98/105 (93%), Positives = 102/105 (97%)
 Frame = +1

Query: 85  KLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 264
           K DPSQVV+VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETA DWKGLRVTVKL
Sbjct: 4   KFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETANDWKGLRVTVKL 63

Query: 265 TVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNGNISLD 399
           TVQNRQAKVSVVPSAAALVIK+LKEPERDRKK KNIKH+G+ISLD
Sbjct: 64  TVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHSGHISLD 108

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>RL12_CHLRE (P50884) 60S ribosomal protein L12 (Fragment)|
          Length = 157

 Score =  169 bits (427), Expect = 2e-42
 Identities = 84/98 (85%), Positives = 92/98 (93%)
 Frame = +1

Query: 103 VVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ 282
           VVEV VRVTGGEVG ASSLAPKIGPLGLSPKKIGEDIAKET KDWKGLR+TVKLTVQNRQ
Sbjct: 1   VVEVCVRVTGGEVGDASSLAPKIGPLGLSPKKIGEDIAKETLKDWKGLRITVKLTVQNRQ 60

Query: 283 AKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNGNISL 396
           AK+SV+PSAAALVIK+LKEP RDRKK KNIKH G++++
Sbjct: 61  AKISVIPSAAALVIKALKEPARDRKKEKNIKHTGSVTM 98

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>RL12_RAT (P23358) 60S ribosomal protein L12|
          Length = 165

 Score =  163 bits (412), Expect = 1e-40
 Identities = 78/105 (74%), Positives = 93/105 (88%)
 Frame = +1

Query: 85  KLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 264
           K DP+++  VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T  DWKGLR+TVKL
Sbjct: 4   KFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKL 62

Query: 265 TVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNGNISLD 399
           T+QNRQA++ VVPSA+AL+IK+LKEP RDRKK KNIKHNGNI+ D
Sbjct: 63  TIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHNGNITFD 107

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>RL12_MOUSE (P35979) 60S ribosomal protein L12|
          Length = 165

 Score =  161 bits (408), Expect = 3e-40
 Identities = 78/105 (74%), Positives = 93/105 (88%)
 Frame = +1

Query: 85  KLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 264
           K DP++V  VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T  DWKGLR+TVKL
Sbjct: 4   KFDPNEVKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKL 62

Query: 265 TVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNGNISLD 399
           T+QNRQA++ VVPSA+AL+IK+LKEP RDRKK KNIKH+GNI+ D
Sbjct: 63  TIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFD 107

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>RL12_HUMAN (P30050) 60S ribosomal protein L12|
          Length = 165

 Score =  161 bits (407), Expect = 4e-40
 Identities = 77/105 (73%), Positives = 93/105 (88%)
 Frame = +1

Query: 85  KLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 264
           K DP+++  VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T  DWKGLR+TVKL
Sbjct: 4   KFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKL 62

Query: 265 TVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNGNISLD 399
           T+QNRQA++ VVPSA+AL+IK+LKEP RDRKK KNIKH+GNI+ D
Sbjct: 63  TIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFD 107

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>RL12_CHILA (Q6QMZ7) 60S ribosomal protein L12|
          Length = 165

 Score =  161 bits (407), Expect = 4e-40
 Identities = 77/105 (73%), Positives = 93/105 (88%)
 Frame = +1

Query: 85  KLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 264
           K DP+++  VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T  DWKGLR+TVKL
Sbjct: 4   KFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKL 62

Query: 265 TVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNGNISLD 399
           T+QNRQA++ VVPSA+AL+IK+LKEP RDRKK KNIKH+GNI+ D
Sbjct: 63  TIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFD 107

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>RL12_BOVIN (P61284) 60S ribosomal protein L12|
          Length = 165

 Score =  161 bits (407), Expect = 4e-40
 Identities = 77/105 (73%), Positives = 93/105 (88%)
 Frame = +1

Query: 85  KLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 264
           K DP+++  VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T  DWKGLR+TVKL
Sbjct: 4   KFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKL 62

Query: 265 TVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNGNISLD 399
           T+QNRQA++ VVPSA+AL+IK+LKEP RDRKK KNIKH+GNI+ D
Sbjct: 63  TIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFD 107

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>RL12_SCHPO (O75000) 60S ribosomal protein L12|
          Length = 165

 Score =  159 bits (401), Expect = 2e-39
 Identities = 78/105 (74%), Positives = 91/105 (86%)
 Frame = +1

Query: 85  KLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 264
           K DP++V  +++R  GGEV   S+LAPKIGPLGLSPKK+GEDIAK T KDWKGLRVTVKL
Sbjct: 4   KFDPNEVKTIFMRAVGGEVAGGSTLAPKIGPLGLSPKKVGEDIAKAT-KDWKGLRVTVKL 62

Query: 265 TVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNGNISLD 399
           T+QNRQA VSVVPSA+ALVIK+LKEP RDRKK KN+ H+GN+SLD
Sbjct: 63  TIQNRQAAVSVVPSASALVIKALKEPARDRKKDKNVAHSGNVSLD 107

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>RL12_CAEEL (P61866) 60S ribosomal protein L12|
          Length = 165

 Score =  157 bits (397), Expect = 6e-39
 Identities = 74/105 (70%), Positives = 92/105 (87%)
 Frame = +1

Query: 85  KLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 264
           K DP+++  VY+R  GGEVGA S+LAPK+GPLGLSPKKIGEDIAK T +DWKGL+VT KL
Sbjct: 4   KFDPTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKAT-QDWKGLKVTCKL 62

Query: 265 TVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNGNISLD 399
           T+QNR AK+ VVPSAA+L++K LKEP RDRKKVKN+KHNG++++D
Sbjct: 63  TIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKNVKHNGDLTVD 107

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>RL12_CAEBR (P61865) 60S ribosomal protein L12|
          Length = 165

 Score =  157 bits (397), Expect = 6e-39
 Identities = 74/105 (70%), Positives = 92/105 (87%)
 Frame = +1

Query: 85  KLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 264
           K DP+++  VY+R  GGEVGA S+LAPK+GPLGLSPKKIGEDIAK T +DWKGL+VT KL
Sbjct: 4   KFDPTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKAT-QDWKGLKVTCKL 62

Query: 265 TVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNGNISLD 399
           T+QNR AK+ VVPSAA+L++K LKEP RDRKKVKN+KHNG++++D
Sbjct: 63  TIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKNVKHNGDLTVD 107

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>RL12_NEUCR (Q9C285) 60S ribosomal protein L12|
          Length = 165

 Score =  157 bits (396), Expect = 7e-39
 Identities = 78/105 (74%), Positives = 92/105 (87%)
 Frame = +1

Query: 85  KLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 264
           K DP++V  + +R TGGEVGA+S+LAPKIGPLGLSPKK+GEDIAK T  DWKGLRVTVKL
Sbjct: 4   KFDPNEVKVITLRATGGEVGASSALAPKIGPLGLSPKKVGEDIAKATG-DWKGLRVTVKL 62

Query: 265 TVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNGNISLD 399
           T+QNRQA VSVVP+A+ALVI++LKEP RDRKK KNIKHN ++S D
Sbjct: 63  TIQNRQAAVSVVPTASALVIRALKEPPRDRKKEKNIKHNKSVSFD 107

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>RL12_YEAST (P17079) 60S ribosomal protein L12 (L15) (YL23)|
          Length = 165

 Score =  147 bits (371), Expect = 6e-36
 Identities = 72/105 (68%), Positives = 91/105 (86%)
 Frame = +1

Query: 85  KLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 264
           K DP++V  +Y+R  GGEVGA+++LAPKIGPLGLSPKK+GEDIAK T K++KG++VTV+L
Sbjct: 4   KFDPNEVKYLYLRAVGGEVGASAALAPKIGPLGLSPKKVGEDIAKAT-KEFKGIKVTVQL 62

Query: 265 TVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNGNISLD 399
            +QNRQA  SVVPSA++LVI +LKEP RDRKK KN+KH+GNI LD
Sbjct: 63  KIQNRQAAASVVPSASSLVITALKEPPRDRKKDKNVKHSGNIQLD 107

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>RL12_ENCCU (Q8SR84) 60S ribosomal protein L12|
          Length = 166

 Score =  102 bits (254), Expect = 2e-22
 Identities = 54/95 (56%), Positives = 72/95 (75%)
 Frame = +1

Query: 112 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV 291
           + ++V GGEV  A+ LA ++GPLGLS K +GEDI K TA D+K L+V V+L +++R+A V
Sbjct: 14  IKLQVVGGEVPGAT-LAQRVGPLGLSSKVVGEDIKKATA-DYKSLKVHVQLAIKDRKATV 71

Query: 292 SVVPSAAALVIKSLKEPERDRKKVKNIKHNGNISL 396
            V PS A L+IKSLKEP RDRKK KNI HNG++ +
Sbjct: 72  EVQPSVATLIIKSLKEPPRDRKKEKNILHNGSLRM 106

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>RL11_PYRFU (Q8TZK0) 50S ribosomal protein L11P|
          Length = 164

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
 Frame = +1

Query: 94  PSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ 273
           P QVVEV V   GG+      L P IGPLGL+ K++ + I  E  KD+ G++V VK+ V 
Sbjct: 2   PKQVVEVLVE--GGKATPGPPLGPAIGPLGLNVKQVVDKI-NEATKDFAGMQVPVKIIVD 58

Query: 274 --NRQAKVSV-VPSAAALVIKSLKEPERDRKKVKNIKHNGNISLD 399
              +Q ++ V VP  + L+ K L   +   +   NI   GN++++
Sbjct: 59  PVTKQFEIEVGVPPTSQLIKKELGLEKGSGEPKHNIV--GNLTME 101

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>RL11_PYRKO (Q5JH34) 50S ribosomal protein L11P|
          Length = 165

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
 Frame = +1

Query: 97  SQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN 276
           +QVVEV V   GG+      L P IGPLGL+ K++ ++I K T K+++G++V VK+ V++
Sbjct: 2   AQVVEVLVE--GGKASPGPPLGPAIGPLGLNVKQVVDEINKAT-KEFEGMQVPVKIIVED 58

Query: 277 RQAK---VSV-VPSAAALVIKSLKEPE 345
            + K   + V +P  + L+ K L  P+
Sbjct: 59  PKKKTFRIEVGIPPTSQLIKKELGIPK 85

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>RL11_ARCFU (O29712) 50S ribosomal protein L11P|
          Length = 157

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
 Frame = +1

Query: 100 QVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ-N 276
           QVVEV V   GG+      L P IGPLGL+ K++ + I  E  KD++GL V VK+ V+ +
Sbjct: 3   QVVEVLV--PGGQASPGPPLGPAIGPLGLNVKQVVDKI-NEATKDYEGLSVPVKIIVKDD 59

Query: 277 RQAKVSV-VPSAAALVIKSL 333
           R  ++ V +P  +AL+ + L
Sbjct: 60  RSFEIEVGIPPVSALIKREL 79

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>RL11_METJA (P54030) 50S ribosomal protein L11P|
          Length = 161

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
 Frame = +1

Query: 100 QVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNR 279
           +VVEV V  TGG   A   L P IGPLG++  ++ ++I ++T KD++G++V VK+ V   
Sbjct: 4   EVVEVLV--TGGRATAGPPLGPAIGPLGVNVMQVVKEINEKT-KDYEGMQVPVKVIVDTE 60

Query: 280 QAKVSV---VPSAAALVIKSL 333
             K  +   +P   AL+ K L
Sbjct: 61  TRKFEIEVGIPPTTALIKKEL 81

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>RL11_METKA (Q8TX52) 50S ribosomal protein L11P|
          Length = 166

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
 Frame = +1

Query: 109 EVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTV--QNRQ 282
           EV V + GG+      L P +GPLG++ +++ E+I ++T KD+KG+ V VK+ V  + R+
Sbjct: 5   EVEVLIEGGKADPGPPLGPALGPLGVNIQEVVEEINRKT-KDFKGMEVPVKIIVDTETRE 63

Query: 283 AKVSVVPSAAALVIKS 330
            +V V     + +IKS
Sbjct: 64  FEVKVGSPPTSAIIKS 79

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>RL11_PYRHO (O57779) 50S ribosomal protein L11P|
          Length = 164

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
 Frame = +1

Query: 100 QVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ-- 273
           QVVEV V   GG+      L P IGPLGL+ K++ + I  E  K++ G++V VK+ V   
Sbjct: 4   QVVEVLVE--GGKATPGPPLGPAIGPLGLNVKQVVDKI-NEATKEFAGMQVPVKIIVDPV 60

Query: 274 NRQAKVSV-VPSAAALVIKSLKEPERDRKKVKNIKHNGNISLD 399
            +Q ++ V VP  + L+ K L   +   +   NI   GN++++
Sbjct: 61  TKQFEIEVGVPPTSQLIKKELGLEKGSGEPKHNIV--GNLTME 101

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>RL11_PYRAB (Q9V2S3) 50S ribosomal protein L11P|
          Length = 164

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
 Frame = +1

Query: 100 QVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ-- 273
           QVVEV V   GG+      L P IGPLGL+ K++ + I  E  K++ G++V VK+ V   
Sbjct: 4   QVVEVLVE--GGKATPGPPLGPAIGPLGLNVKQVVDKI-NEATKEFAGMQVPVKIIVDPV 60

Query: 274 NRQAKVSV-VPSAAALVIKSLKEPERDRKKVKNIKHNGNISLD 399
            +Q ++ V VP  + L+ K L   +   +   NI   GN++++
Sbjct: 61  TKQFEIEVGVPPTSQLIKKELGLEKGSGEPKHNIV--GNLTME 101

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>RL11_METTH (O27715) 50S ribosomal protein L11P|
          Length = 160

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
 Frame = +1

Query: 112 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTV--QNRQA 285
           V + + GG+      L P IGPLG++  ++ E+I ++TA D++G++V VK+ V    R  
Sbjct: 6   VEILIDGGKATPGPPLGPAIGPLGINMMQVVEEINRKTA-DFEGMKVPVKIIVDTDTRDF 64

Query: 286 KVSV-VPSAAALVIKSLK 336
           +V V  P   AL++  LK
Sbjct: 65  EVEVGTPPTTALIMDELK 82

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>RL11_METMP (P62445) 50S ribosomal protein L11P|
          Length = 159

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
 Frame = +1

Query: 100 QVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNR 279
           QVVE+ V  +GG+  A   L P IGPLG++  ++ + I   T KD++G+ V VK+ V   
Sbjct: 4   QVVEILV--SGGKATAGPPLGPAIGPLGVNIMQVVQKINNMT-KDYEGMSVPVKVIVDTD 60

Query: 280 QAKVSV---VPSAAALVIKSLKEPERDRKKVKNIKHNGNISLD 399
           +    V   +P A+AL+ K +   +  ++    +   GNI+++
Sbjct: 61  KRTFEVEVGIPPASALIKKEIGIEKGSQEPKHQVA--GNITME 101

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>RL11_METMA (Q8PY53) 50S ribosomal protein L11P|
          Length = 161

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 26/72 (36%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
 Frame = +1

Query: 124 VTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ-AKVSV- 297
           V GG+      L P +GPLG++ K++ E I ++T +D+ G++V VK+ V +++  ++ V 
Sbjct: 9   VPGGKANPGPPLGPALGPLGVNIKEVVEKINEKT-RDYNGMQVPVKVIVDDKKNVEIEVG 67

Query: 298 VPSAAALVIKSL 333
            P  A+LV+K L
Sbjct: 68  TPPTASLVMKEL 79

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>RL11_METAC (Q8TI82) 50S ribosomal protein L11P|
          Length = 161

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 26/72 (36%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
 Frame = +1

Query: 124 VTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ-AKVSV- 297
           V GG+      L P +GPLG++ K++ E I ++T +D+ G++V VK+ V +++  ++ V 
Sbjct: 9   VPGGKANPGPPLGPALGPLGVNIKEVVEKINEKT-RDYNGMQVPVKVIVDDKKNVEIEVG 67

Query: 298 VPSAAALVIKSL 333
            P  A+LV+K L
Sbjct: 68  TPPTASLVMKEL 79

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>RL11_THEAC (Q9HL70) 50S ribosomal protein L11P|
          Length = 156

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 31/100 (31%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
 Frame = +1

Query: 112 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTV---QNRQ 282
           V   V GG+      + P +GPLGL+  ++ ++I ++T K+++G+RV V +TV   + ++
Sbjct: 5   VKTMVEGGKATTGPPIGPALGPLGLNVAQVVKEINEKT-KEFQGMRVPVTITVVDPETKK 63

Query: 283 AKVSV-VPSAAALVIKSLKEPERDRKKVKNIKHNGNISLD 399
            +++V +P  +AL+ K L   +   K+ + I   GN +LD
Sbjct: 64  YEITVGIPPTSALLKKKLGIEKGAAKRKEAIA--GNATLD 101

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>RL11_THEVO (Q97BN1) 50S ribosomal protein L11P|
          Length = 158

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
 Frame = +1

Query: 112 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTV---QNRQ 282
           V   V GG+      + P +GPLGL+  ++ ++I ++T K+++G++V V +TV   + ++
Sbjct: 5   VKTMVEGGKATTGPPIGPALGPLGLNVAQVVKEINEKT-KEFQGMQVPVTVTVIDPETKK 63

Query: 283 AKVSV-VPSAAALVIKSLKEPERDRKKVKNIKHNGNI 390
            +++V VP  +AL+ K L   +   KK + +  N  +
Sbjct: 64  YEITVGVPPTSALLKKELGLEKGASKKKEAVAGNATL 100

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>RL11_PICTO (Q6L1Y0) 50S ribosomal protein L11P|
          Length = 155

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
 Frame = +1

Query: 103 VVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ 282
           +V V   V GG+      L P +GPLGL+  ++ +DI ++T K++ G++V V + V +  
Sbjct: 1   MVAVKTMVEGGKATTGPPLGPALGPLGLNLGQVVKDINEKT-KNFAGMQVPVTVNVIDPA 59

Query: 283 AK----VSVVPSAAALVIKSLKEPERDRKKVKNIKHNGNI 390
            K    +  VP  +AL+ K L   +   KK + I  N  +
Sbjct: 60  TKKYEIIVGVPPTSALLKKELGIEKGASKKKEKIAGNATL 99

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>RL11_SULSO (P96037) 50S ribosomal protein L11P|
          Length = 170

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
 Frame = +1

Query: 112 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQA 285
           + + V GG V     LAP +  LGL+   +GE + K  E    +KG+ V V + V +   
Sbjct: 6   IKIMVEGGNVKPGPPLAPTLSQLGLN---VGEVVKKLNEATSSFKGMSVPVTIEVDSSTK 62

Query: 286 KVSV---VPSAAALVIK--SLKEPERD--RKKVKNIKHNGNISLD 399
           K  +   +P+  AL++K     EP  D   KK+      GN+SL+
Sbjct: 63  KYEIKVGIPTTTALLLKEAGASEPSGDPAHKKI------GNLSLE 101

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>RL11_SULTO (Q971J0) 50S ribosomal protein L11P|
          Length = 170

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
 Frame = +1

Query: 112 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQA 285
           + + V GG V     LAP +  LGL+   +GE + K  +    +KG+ V V L V     
Sbjct: 6   IKIVVEGGNVKPGPPLAPTLSQLGLN---VGEVVKKINDATSQFKGMSVPVTLEVDTDTK 62

Query: 286 KVSV---VPSAAALVIK--SLKEPERD--RKKVKNIK 375
           K  +   +P+  +L++K  +  EP  D   KKV +IK
Sbjct: 63  KYEIKVGIPTTTSLLLKFANASEPSGDPAHKKVGDIK 99

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>RL11_SULAC (P35025) 50S ribosomal protein L11P|
          Length = 169

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
 Frame = +1

Query: 112 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV 291
           + + V GG       L P +  LGL+ +++ + I   TA+ +KG+ V V + + +   K 
Sbjct: 5   IKIMVEGGSAKPGPPLGPTLSQLGLNVQEVVKKINDVTAQ-FKGMSVPVTIEIDSSTKKY 63

Query: 292 SV---VPSAAALVIKSL--KEPERD--RKKVKNI 372
            +   VP+  +L++K++  +EP  D   KK+ N+
Sbjct: 64  DIKVGVPTTTSLLLKAINAQEPSGDPAHKKIGNL 97

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>RL11_HALMA (P14122) 50S ribosomal protein L11P (Hmal11)|
          Length = 161

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +1

Query: 112 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAK-DWKGLRVTVKLTVQNR-QA 285
           + V V GGE      L P++GP  +  + + ++I  +TA  D   + VTVK       + 
Sbjct: 4   IEVLVPGGEANPGPPLGPELGPTPVDVQAVVQEINDQTAAFDGTEVPVTVKYDDDGSFEI 63

Query: 286 KVSVVPSA 309
           +V V P+A
Sbjct: 64  EVGVPPTA 71

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>RS20_BRAJA (Q89W61) 30S ribosomal protein S20|
          Length = 88

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 22/69 (31%), Positives = 32/69 (46%)
 Frame = +1

Query: 187 SPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVK 366
           S KK    IA+ TA + K  R  ++  V+N +  +     AAA+   +  EP   R   +
Sbjct: 6   SAKKATRKIARRTAVN-KSRRTQMRGAVRNVEEAIKTGDRAAAVKALANAEPALMRAAQR 64

Query: 367 NIKHNGNIS 393
           NI H  N S
Sbjct: 65  NIIHKNNAS 73

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>RL11_HALVO (P41200) 50S ribosomal protein L11P (L11E)|
          Length = 158

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
 Frame = +1

Query: 112 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNR---Q 282
           + V V GG+      L P++GP  +  + +  DI  +TA  + G+ V V +   +     
Sbjct: 4   IEVLVPGGKANPGPPLGPELGPTPVDVQDVVNDINDQTAA-FDGMEVPVTVEYDDDGSFS 62

Query: 283 AKVSVVPSAAAL 318
            +V V P+AA +
Sbjct: 63  IEVGVPPTAALI 74

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>RL11_THETN (Q8R7U2) 50S ribosomal protein L11|
          Length = 140

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 23/96 (23%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
 Frame = +1

Query: 103 VVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ 282
           V  V +++  G+   A  +   +GP G++     ++  + TAKD  GL + V +T+ + +
Sbjct: 6   VAVVKIQLPAGKATPAPPVGTALGPHGVNIMAFCKEFNERTAKD-AGLIIPVVITIYSDR 64

Query: 283 --AKVSVVPSAAALVIKSL----KEPERDRKKVKNI 372
             + ++  P A+ L+ K+       P+ +++KV  I
Sbjct: 65  SFSFITKTPPASVLLKKAAGIESGSPQPNKQKVGKI 100

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>MAP1B_RAT (P15205) Microtubule-associated protein 1B (MAP 1B) (Neuraxin)|
           [Contains: MAP1 light chain LC1]
          Length = 2459

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = +1

Query: 193 KKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKSLKEPERDRKKV-KN 369
           K+I ++I KE  K+   L+  VK     + AK  V       V K  KEP+++ KK+ K+
Sbjct: 679 KEIKKEIKKEEKKE---LKKEVKKETPLKDAKKEVKKDEKKEVKKEEKEPKKEIKKISKD 735

Query: 370 IKHNGNIS 393
           IK +  +S
Sbjct: 736 IKKSTPLS 743

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>RL2_SHEON (Q8EK65) 50S ribosomal protein L2|
          Length = 274

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = +1

Query: 106 VEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN 276
           V V  R T GEVG A  +  ++G  G              AK W+G+R TV+    N
Sbjct: 184 VPVDCRATFGEVGNAEHMLRQLGKAG--------------AKRWRGIRPTVRGVAMN 226

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>RL11_BORGA (Q661M5) 50S ribosomal protein L11|
          Length = 143

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
 Frame = +1

Query: 112 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV 291
           + ++V   +    + +   +GP G+S  +  ++  + TAK   G+ V V +TV + ++  
Sbjct: 10  IKLQVPAAQAAPGAKIGQALGPHGVSGPQFVKEFNERTAKMDPGIVVPVIITVYSDKSFS 69

Query: 292 SVV--PSAAALVIKSL 333
            +V  P A+ L+ K++
Sbjct: 70  FIVKTPPASILIKKTI 85

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>RL11_BORBU (O51354) 50S ribosomal protein L11|
          Length = 143

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
 Frame = +1

Query: 112 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV 291
           + ++V   +    + +   +GP G+S  +  ++  + TAK   G+ V V +TV + ++  
Sbjct: 10  IKLQVPAAQAAPGAKIGQALGPHGVSGPQFVKEFNERTAKMDPGIVVPVIITVYSDKSFS 69

Query: 292 SVV--PSAAALVIKSL 333
            +V  P A+ L+ K++
Sbjct: 70  FIVKTPPASILIKKAI 85

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>RL2_BACSU (P42919) 50S ribosomal protein L2 (BL2)|
          Length = 276

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +1

Query: 112 VYVRVTGGEVGAA-SSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN 276
           V VR+  GEV    S+    IG +G    ++  +I K     WKG+R TV+ +V N
Sbjct: 171 VLVRLNSGEVRMILSACRASIGQVGNEQHEL-INIGKAGRSRWKGIRPTVRGSVMN 225

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>RL11_HALSA (P05969) 50S ribosomal protein L11P|
          Length = 162

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
 Frame = +1

Query: 112 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKET-AKDWKGLRVTVKLTVQNRQAK 288
           + V V GG+      L P++GP  +  + + ++I  +T A D   + VT++       + 
Sbjct: 4   IEVLVAGGQADPGPPLGPELGPTPVDVQAVVQEINDQTEAFDGTEVPVTIEYEDDGSFSI 63

Query: 289 VSVVPSAAALV 321
              VP  AALV
Sbjct: 64  EVGVPPTAALV 74

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>MAP1B_MOUSE (P14873) Microtubule-associated protein 1B (MAP 1B) (MAP1.2)|
           (MAP1(X)) [Contains: MAP1 light chain LC1]
          Length = 2464

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = +1

Query: 193 KKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKSLKEPERDRKKV-KN 369
           K+I ++I KE  K+   L+  VK     + AK  V       V K  KEP+++ KK+ K+
Sbjct: 680 KEIKKEIKKEERKE---LKKEVKKETPLKDAKKEVKKEEKKEVKKEEKEPKKEIKKISKD 736

Query: 370 IK 375
           IK
Sbjct: 737 IK 738

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>MRAW_HELPJ (Q9ZLD4) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)|
          Length = 308

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 130 GGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKG 243
           GG   A  S  P +  +G+   K  ++IAKE  K+++G
Sbjct: 36  GGHSKAILSQKPHLKLIGIDKDKFAQEIAKERLKEFEG 73

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>RL2_NEIMA (Q9JX12) 50S ribosomal protein L2|
          Length = 277

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = +1

Query: 106 VEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN 276
           + V  R T GEVG       KIG  G              A  W+G+R TV+  V N
Sbjct: 184 INVNCRATIGEVGNEEQSLKKIGKAG--------------ANRWRGIRPTVRGVVMN 226

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>LPXD_PORGI (Q7MXT7) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase|
           (EC 2.3.1.-)
          Length = 349

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 129 GHPDVDLHHLRRVELGRHGCCS 64
           G+P V LH   ++E GR GC S
Sbjct: 18  GNPKVRLHDFAKIEEGRSGCLS 39

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>SRCH_HUMAN (P23327) Sarcoplasmic reticulum histidine-rich calcium-binding|
           protein precursor
          Length = 699

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 246 PRHRQAHRPEPSGQGLRRPLRRGARH 323
           P HRQ+H+ E +G G R  ++  + H
Sbjct: 439 PSHRQSHQDEETGHGQRGSIKEMSHH 464

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>RL2_NEIMB (Q9K1I5) 50S ribosomal protein L2|
          Length = 277

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = +1

Query: 106 VEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN 276
           + V  R T GEVG       KIG  G              A  W+G+R TV+  V N
Sbjct: 184 INVDCRATIGEVGNEEQSLKKIGKAG--------------ANRWRGIRPTVRGVVMN 226

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>RL2_CHRVO (Q7NQF5) 50S ribosomal protein L2|
          Length = 277

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/59 (32%), Positives = 25/59 (42%)
 Frame = +1

Query: 100 QVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN 276
           ++V V  R T GEVG       K+G  G              A  W+G+R TV+ T  N
Sbjct: 182 RLVHVDCRATVGEVGNEEHSLRKLGKAG--------------ATRWRGIRPTVRGTAMN 226

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>ATC1_YEAST (P13586) Calcium-transporting ATPase 1 (EC 3.6.3.8) (Golgi|
           Ca(2+)-ATPase)
          Length = 950

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +1

Query: 118 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETA 228
           V +TG  V  A +L  K+  +G+S  +IG D+AKE +
Sbjct: 675 VAMTGDGVNDAPAL--KLSDIGVSMGRIGTDVAKEAS 709

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>MURG_MYCTU (O06224) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 410

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
 Frame = +1

Query: 190 PKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSV-----VPSAAALVIKSLKEPERDR 354
           P+K G D+A+  ++ W+ +R   +  + +  A V V     V   A L  + L  P R R
Sbjct: 98  PRKPGGDLARLPSRVWRAVR-EARDVLDDVDADVVVGFGGYVALPAYLAARGLPLPPRRR 156

Query: 355 KKVKNIKHNGN 387
           +++  + H  N
Sbjct: 157 RRIPVVIHEAN 167

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>MURG_MYCBO (Q7VEP8) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 410

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
 Frame = +1

Query: 190 PKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSV-----VPSAAALVIKSLKEPERDR 354
           P+K G D+A+  ++ W+ +R   +  + +  A V V     V   A L  + L  P R R
Sbjct: 98  PRKPGGDLARLPSRVWRAVR-EARDVLDDVDADVVVGFGGYVALPAYLAARGLPLPPRRR 156

Query: 355 KKVKNIKHNGN 387
           +++  + H  N
Sbjct: 157 RRIPVVIHEAN 167

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>PCIF1_HUMAN (Q9H4Z3) Phosphorylated CTD-interacting factor 1|
          Length = 704

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 237 EGPPRHRQAHRPEPSGQGLRRP 302
           E  PR RQ    +PSG G+++P
Sbjct: 107 ENKPRKRQLSEEQPSGNGVKKP 128


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.309    0.130    0.349 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,847,835
Number of Sequences: 219361
Number of extensions: 433795
Number of successful extensions: 1457
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1445
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result