ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast16e03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483413.1| Oryza sativa (japonica cultivar-group), mRNA 157 3e-35
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 157 3e-35
3dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic D... 157 3e-35
4gb|AY108865.1| Zea mays PCO075691 mRNA sequence 127 3e-26
5gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome... 54 4e-04
6gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome... 54 4e-04
7dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
8emb|AL929444.6| Human DNA sequence from clone RP11-359B3 on chro... 44 0.35
9gb|AC068556.10| Homo sapiens chromosome 10 clone RP11-415G6, com... 44 0.35
10gb|AC068060.5| Homo sapiens chromosome 10 clone RP11-359B3, comp... 44 0.35
11gb|AC008144.5|AC008144 Drosophila melanogaster, chromosome 3R, r... 44 0.35
12gb|AE003737.3| Drosophila melanogaster chromosome 3R, section 75... 44 0.35
13ref|XM_483411.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
14gb|CP000145.1| Rhodobacter sphaeroides 2.4.1 plasmid B, complete... 42 1.4
15ref|XM_361363.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.4
16tpg|BK003676.1| TPA: TPA_inf: Drosophila melanogaster HDC05200 (... 42 1.4
17gb|AC091388.1|AC091388 Drosophila melanogaster, chromosome 2R, r... 42 1.4
18dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.4
19dbj|AP003887.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
20dbj|AK058714.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
21gb|AE003837.3| Drosophila melanogaster chromosome 2R, section 13... 42 1.4
22gb|AC006421.1|AC006421 Drosophila melanogaster, chromosome 2R, r... 42 1.4
23gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 1.4
24emb|AL833803.8| Mouse DNA sequence from clone RP23-244H7 on chro... 42 1.4
25gb|AC101660.25| Mus musculus chromosome 15, clone RP23-4I22, com... 42 1.4
26gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
27gb|AC116367.10| Oryza sativa (japonica cultivar-group) chromosom... 40 5.5
28gb|AC154623.2| Mus musculus BAC clone RP23-327K7 from chromosome... 40 5.5
29gb|AC165278.4| Mus musculus chromosome 15, clone RP23-250O18, co... 40 5.5
30gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 5.5
31gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.5
32gb|AC131316.8| Mus musculus chromosome 1, clone RP23-302H1, comp... 40 5.5
33gb|AC125534.4| Mus musculus BAC clone RP23-460A22 from chromosom... 40 5.5
34emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 5.5
35gb|AC122828.3| Mus musculus BAC clone RP23-215B8 from 13, comple... 40 5.5
36ref|XM_846699.1| PREDICTED: Canis familiaris similar to prostate... 40 5.5
37emb|AL512428.13| Human DNA sequence from clone RP11-373L11 on ch... 40 5.5
38gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 5.5
39emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete ... 40 5.5
40gb|AF448526.1| Mytilus galloprovincialis precollagen-D mRNA, com... 40 5.5
41gb|AE011626.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 5.5
42ref|NM_078688.2| Drosophila melanogaster domeless CG14226-RA (do... 40 5.5
43gb|DQ355953.1| Oryza sativa (indica cultivar-group) cultivar Teq... 40 5.5
44gb|AY075427.1| Drosophila melanogaster LD46805 full length cDNA 40 5.5
45gb|AC099011.1| Drosophila melanogaster, chromosome 2L, region 24... 40 5.5
46gb|AC010671.8|AC010671 Drosophila melanogaster, chromosome X, re... 40 5.5
47dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
48dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
49gb|AC008003.8|AC008003 Drosophila melanogaster, chromosome 2L, r... 40 5.5
50gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic ... 40 5.5
51dbj|AK100155.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
52gb|AE003578.3| Drosophila melanogaster chromosome 2L, section 13... 40 5.5
53gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 ... 40 5.5
54gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 5.5
55gb|AC004279.1|AC004279 Drosophila melanogaster DNA sequence (P1 ... 40 5.5
56gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
57gb|AY147847.1| Drosophila melanogaster cytokine receptor domeles... 40 5.5
58emb|AJ420377.1|DME420377 Drosophila melanogaster mRNA for putati... 40 5.5
59dbj|AB032799.1| Chromobacterium violaceum violacein biosynthetic... 40 5.5 
>ref|XM_483413.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 792

 Score =  157 bits (79), Expect = 3e-35
 Identities = 179/211 (84%), Gaps = 1/211 (0%)
 Strand = Plus / Plus

                                                                       
Query: 193 cgagaagttcccggcggggaagacgtacgccaagtgcgaggacctcccgcagctgggggc 252
           |||||||||||||||||||| | |||||||   |||||||||||| |||   || || ||
Sbjct: 93  cgagaagttcccggcggggagggcgtacgcggcgtgcgaggacctgccgagcctcggcgc 152

                                                                       
Query: 253 cgcgctgcactggacctacgacgagtccaagtcgtccctctcgctggcgttcgtggccgc 312
            ||||||||||  || ||||||| ||||||||||||||| ||| ||||||||||||| ||
Sbjct: 153 ggcgctgcactacacgtacgacgcgtccaagtcgtccctgtcggtggcgttcgtggcggc 212

                                                                       
Query: 313 gccggcgggggccaacgggtgggtggcctgagcgct-cacctcacgggcgagggcatggc 371
           ||||||||| |||  |||||||||||| || | |||  ||| ||| |||||||| |||||
Sbjct: 213 gccggcgggcgccggcgggtgggtggcgtgggggctgaaccccaccggcgaggggatggc 272

                                          
Query: 372 cggcgcgcaggcgctcgtggcgctcaagggc 402
           |||  ||||||||||||||||||||||||||
Sbjct: 273 cgggacgcaggcgctcgtggcgctcaagggc 303
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  157 bits (79), Expect = 3e-35
 Identities = 179/211 (84%), Gaps = 1/211 (0%)
 Strand = Plus / Plus

                                                                            
Query: 193      cgagaagttcccggcggggaagacgtacgccaagtgcgaggacctcccgcagctgggggc 252
                |||||||||||||||||||| | |||||||   |||||||||||| |||   || || ||
Sbjct: 26079482 cgagaagttcccggcggggagggcgtacgcggcgtgcgaggacctgccgagcctcggcgc 26079541

                                                                            
Query: 253      cgcgctgcactggacctacgacgagtccaagtcgtccctctcgctggcgttcgtggccgc 312
                 ||||||||||  || ||||||| ||||||||||||||| ||| ||||||||||||| ||
Sbjct: 26079542 ggcgctgcactacacgtacgacgcgtccaagtcgtccctgtcggtggcgttcgtggcggc 26079601

                                                                            
Query: 313      gccggcgggggccaacgggtgggtggcctgagcgct-cacctcacgggcgagggcatggc 371
                ||||||||| |||  |||||||||||| || | |||  ||| ||| |||||||| |||||
Sbjct: 26079602 gccggcgggcgccggcgggtgggtggcgtgggggctgaaccccaccggcgaggggatggc 26079661

                                               
Query: 372      cggcgcgcaggcgctcgtggcgctcaagggc 402
                |||  ||||||||||||||||||||||||||
Sbjct: 26079662 cgggacgcaggcgctcgtggcgctcaagggc 26079692



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 367      atggccggcgcgcaggcgctcgtggcgct 395
                ||||||||| ||||||||||||| |||||
Sbjct: 26067072 atggccggcacgcaggcgctcgtcgcgct 26067044
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>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1191_A10
          Length = 140643

 Score =  157 bits (79), Expect = 3e-35
 Identities = 179/211 (84%), Gaps = 1/211 (0%)
 Strand = Plus / Plus

                                                                         
Query: 193   cgagaagttcccggcggggaagacgtacgccaagtgcgaggacctcccgcagctgggggc 252
             |||||||||||||||||||| | |||||||   |||||||||||| |||   || || ||
Sbjct: 23413 cgagaagttcccggcggggagggcgtacgcggcgtgcgaggacctgccgagcctcggcgc 23472

                                                                         
Query: 253   cgcgctgcactggacctacgacgagtccaagtcgtccctctcgctggcgttcgtggccgc 312
              ||||||||||  || ||||||| ||||||||||||||| ||| ||||||||||||| ||
Sbjct: 23473 ggcgctgcactacacgtacgacgcgtccaagtcgtccctgtcggtggcgttcgtggcggc 23532

                                                                         
Query: 313   gccggcgggggccaacgggtgggtggcctgagcgct-cacctcacgggcgagggcatggc 371
             ||||||||| |||  |||||||||||| || | |||  ||| ||| |||||||| |||||
Sbjct: 23533 gccggcgggcgccggcgggtgggtggcgtgggggctgaaccccaccggcgaggggatggc 23592

                                            
Query: 372   cggcgcgcaggcgctcgtggcgctcaagggc 402
             |||  ||||||||||||||||||||||||||
Sbjct: 23593 cgggacgcaggcgctcgtggcgctcaagggc 23623



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 367   atggccggcgcgcaggcgctcgtggcgct 395
             ||||||||| ||||||||||||| |||||
Sbjct: 11003 atggccggcacgcaggcgctcgtcgcgct 10975
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>gb|AY108865.1| Zea mays PCO075691 mRNA sequence
          Length = 425

 Score =  127 bits (64), Expect = 3e-26
 Identities = 170/204 (83%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                       
Query: 193 cgagaagttcccggcggggaagacgtacgccaagtgcgaggacctcccgcagctgggggc 252
           |||||||||||||||||||    |||||||   |||||||||||| ||| ||||||| ||
Sbjct: 160 cgagaagttcccggcggggcgtgcgtacgcgtcgtgcgaggacctgccgaagctgggcgc 219

                                                                       
Query: 253 cgcgctgcactggacctacgacgagtccaagtcgtccctctcgctggcgttcgtggccgc 312
             ||||||||||||| ||||||| |||||||   ||||| ||| ||||||||||||| ||
Sbjct: 220 gtcgctgcactggacgtacgacgcgtccaagagctccctgtcggtggcgttcgtggcggc 279

                                                                       
Query: 313 gccggcgggggccaacgggtgggtggcctgagcgct-cacctcacgggcgagggcatggc 371
           ||| |||| |||   |||||||||||| || |  ||  |||  |||||||||||||||||
Sbjct: 280 gcccgcggcggcgggcgggtgggtggcgtggggcctgaaccctacgggcgagggcatggc 339

                                   
Query: 372 cggcgcgcaggcgctcgtggcgct 395
           ||||||||||||||| ||||||||
Sbjct: 340 cggcgcgcaggcgctggtggcgct 363



 Score = 46.1 bits (23), Expect = 0.089
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 95  gcctccacgatgccgcgccacatcgcgctgctgttgctcctgctcct 141
           |||||||| |||||||||||  ||||||||||  ||| |||||||||
Sbjct: 65  gcctccacaatgccgcgccatctcgcgctgctcctgcccctgctcct 111
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>gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0019D02, complete sequence
          Length = 154692

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                          
Query: 193    cgagaagttcccggcggggaagacgtacgccaagtgcgaggacctcccgcagctgggggc 252
              |||||||||||||||||||| ||  ||||| | |||||  ||||| |||  ||| || ||
Sbjct: 150058 cgagaagttcccggcggggaggagctacgcgacgtgcgccgacctgccggcgctcggcgc 150117

                                     
Query: 253    cgcgctgcactggacctacgacg 275
                |||||||||||||||||||||
Sbjct: 150118 gacgctgcactggacctacgacg 150140
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>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBb0004A05, complete sequence
          Length = 157913

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                         
Query: 193   cgagaagttcccggcggggaagacgtacgccaagtgcgaggacctcccgcagctgggggc 252
             |||||||||||||||||||| ||  ||||| | |||||  ||||| |||  ||| || ||
Sbjct: 34732 cgagaagttcccggcggggaggagctacgcgacgtgcgccgacctgccggcgctcggcgc 34791

                                    
Query: 253   cgcgctgcactggacctacgacg 275
               |||||||||||||||||||||
Sbjct: 34792 gacgctgcactggacctacgacg 34814
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                            
Query: 193      cgagaagttcccggcggggaagacgtacgccaagtgcgaggacctcccgcagctgggggc 252
                |||||||||||||||||||| ||  ||||| | |||||  ||||| |||  ||| || ||
Sbjct: 19104773 cgagaagttcccggcggggaggagctacgcgacgtgcgccgacctgccggcgctcggcgc 19104832

                                       
Query: 253      cgcgctgcactggacctacgacg 275
                  |||||||||||||||||||||
Sbjct: 19104833 gacgctgcactggacctacgacg 19104855
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>emb|AL929444.6| Human DNA sequence from clone RP11-359B3 on chromosome 10 Contains a
             ribosomal protein S27 (metallopanstimulin 1) (MPS1, MPS-1)
             (RPS27) pseudogene, complete sequence
          Length = 50865

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 319   gggggccaacgggtgggtggcctgag 344
             |||||||||| |||||||||||||||
Sbjct: 12070 gggggccaacaggtgggtggcctgag 12045
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>gb|AC068556.10| Homo sapiens chromosome 10 clone RP11-415G6, complete sequence
          Length = 182913

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 319    gggggccaacgggtgggtggcctgag 344
              |||||||||| |||||||||||||||
Sbjct: 135290 gggggccaacaggtgggtggcctgag 135315
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>gb|AC068060.5| Homo sapiens chromosome 10 clone RP11-359B3, complete sequence
          Length = 182912

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 319   gggggccaacgggtgggtggcctgag 344
             |||||||||| |||||||||||||||
Sbjct: 47618 gggggccaacaggtgggtggcctgag 47593
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>gb|AC008144.5|AC008144 Drosophila melanogaster, chromosome 3R, region 93F-93F, BAC clone
             BACR04F21, complete sequence
          Length = 171226

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 121   gctgctgttgctcctgctcctc 142
             ||||||||||||||||||||||
Sbjct: 45504 gctgctgttgctcctgctcctc 45483
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>gb|AE003737.3| Drosophila melanogaster chromosome 3R, section 75 of 118 of the complete
              sequence
          Length = 178251

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 121    gctgctgttgctcctgctcctc 142
              ||||||||||||||||||||||
Sbjct: 140880 gctgctgttgctcctgctcctc 140901
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>ref|XM_483411.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1418

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 367 atggccggcgcgcaggcgctcgtggcgct 395
           ||||||||| ||||||||||||| |||||
Sbjct: 327 atggccggcacgcaggcgctcgtcgcgct 355
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>gb|CP000145.1| Rhodobacter sphaeroides 2.4.1 plasmid B, complete sequence
          Length = 114178

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 362   agggcatggccggcgcgcaggcgct 386
             |||||||| ||||||||||||||||
Sbjct: 38410 agggcatgaccggcgcgcaggcgct 38434
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>ref|XM_361363.1| Magnaporthe grisea 70-15 hypothetical protein (MG03837.4) partial
            mRNA
          Length = 2733

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 121  gctgctgttgctcctgctcct 141
            |||||||||||||||||||||
Sbjct: 2407 gctgctgttgctcctgctcct 2387
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>tpg|BK003676.1| TPA: TPA_inf: Drosophila melanogaster HDC05200 (HDC05200) gene,
            complete cds
          Length = 4612

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 121  gctgctgttgctcctgctcct 141
            |||||||||||||||||||||
Sbjct: 2864 gctgctgttgctcctgctcct 2884
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>gb|AC091388.1|AC091388 Drosophila melanogaster, chromosome 2R, region 44C-44D, BAC clone
              BACR14B02, complete sequence
          Length = 194036

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 121    gctgctgttgctcctgctcct 141
              |||||||||||||||||||||
Sbjct: 148552 gctgctgttgctcctgctcct 148572
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                                
Query: 354     cacgggcgagggcatggccggcgcgcaggcgct 386
               |||| ||||||||| ||||||||||||||||||
Sbjct: 1513576 cacgtgcgagggca-ggccggcgcgcaggcgct 1513607
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>dbj|AP003887.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1186_G01
          Length = 112077

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 367    atggccggcgcgcaggcgctcgtggcgct 395
              ||||||||| ||||||||||||| |||||
Sbjct: 102633 atggccggcacgcaggcgctcgtcgcgct 102605
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>dbj|AK058714.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D11, full
           insert sequence
          Length = 1418

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 367 atggccggcgcgcaggcgctcgtggcgct 395
           ||||||||| ||||||||||||| |||||
Sbjct: 327 atggccggcacgcaggcgctcgtcgcgct 355
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>gb|AE003837.3| Drosophila melanogaster chromosome 2R, section 13 of 73 of the complete
              sequence
          Length = 265215

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 121    gctgctgttgctcctgctcct 141
              |||||||||||||||||||||
Sbjct: 114109 gctgctgttgctcctgctcct 114129
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>gb|AC006421.1|AC006421 Drosophila melanogaster, chromosome 2R, region 44C1-44C5, P1 clones
             DS08614 and DS00667, complete sequence
          Length = 100575

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 121   gctgctgttgctcctgctcct 141
             |||||||||||||||||||||
Sbjct: 63497 gctgctgttgctcctgctcct 63517
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 102     cgatgccgcgccacatcgcgc 122
               |||||||||||||||||||||
Sbjct: 3201171 cgatgccgcgccacatcgcgc 3201151
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>emb|AL833803.8| Mouse DNA sequence from clone RP23-244H7 on chromosome 2, complete
              sequence
          Length = 226251

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 121    gctgctgttgctcctgctcct 141
              |||||||||||||||||||||
Sbjct: 149362 gctgctgttgctcctgctcct 149342



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 121    gctgctgttgctcctgctcct 141
              |||||||||||||||||||||
Sbjct: 149227 gctgctgttgctcctgctcct 149207
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>gb|AC101660.25| Mus musculus chromosome 15, clone RP23-4I22, complete sequence
          Length = 188464

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 47    acaagtcctcactcaccactg 67
             |||||||||||||||||||||
Sbjct: 51172 acaagtcctcactcaccactg 51192
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>gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004O15
              map near R3342S, complete sequence
          Length = 140142

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    cgctgctgttgctcctgctc 139
              ||||||||||||||||||||
Sbjct: 104988 cgctgctgttgctcctgctc 105007
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>gb|AC116367.10| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0059H21 map R3342S, complete sequence
          Length = 133790

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   cgctgctgttgctcctgctc 139
             ||||||||||||||||||||
Sbjct: 87843 cgctgctgttgctcctgctc 87862
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>gb|AC154623.2| Mus musculus BAC clone RP23-327K7 from chromosome 13, complete sequence
          Length = 190884

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    ctgctgttgctcctgctcct 141
              ||||||||||||||||||||
Sbjct: 105720 ctgctgttgctcctgctcct 105701
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>gb|AC165278.4| Mus musculus chromosome 15, clone RP23-250O18, complete sequence
          Length = 187758

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    ctgctgttgctcctgctcct 141
              ||||||||||||||||||||
Sbjct: 135283 ctgctgttgctcctgctcct 135264
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 364     ggcatggccggcgcgcaggc 383
               ||||||||||||||||||||
Sbjct: 3952532 ggcatggccggcgcgcaggc 3952551
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 122      ctgctgttgctcctgctcct 141
                ||||||||||||||||||||
Sbjct: 34133895 ctgctgttgctcctgctcct 34133914
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>gb|AC131316.8| Mus musculus chromosome 1, clone RP23-302H1, complete sequence
          Length = 237076

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    tgctgttgctcctgctcctc 142
              ||||||||||||||||||||
Sbjct: 203258 tgctgttgctcctgctcctc 203277
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>gb|AC125534.4| Mus musculus BAC clone RP23-460A22 from chromosome 13, complete sequence
          Length = 181040

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 337    ggcctgagcgctcacctcac 356
              ||||||||||||||||||||
Sbjct: 151706 ggcctgagcgctcacctcac 151687
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 370   gccggcgcgcaggcgctcgt 389
             ||||||||||||||||||||
Sbjct: 41472 gccggcgcgcaggcgctcgt 41491
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>gb|AC122828.3| Mus musculus BAC clone RP23-215B8 from 13, complete sequence
          Length = 198604

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 337   ggcctgagcgctcacctcac 356
             ||||||||||||||||||||
Sbjct: 15707 ggcctgagcgctcacctcac 15688
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>ref|XM_846699.1| PREDICTED: Canis familiaris similar to prostate tumor over
           expressed gene 1 (predicted) (LOC483946), mRNA
          Length = 540

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 118 cgcgctgctgttgctcctgctcct 141
           |||||||||| |||||||||||||
Sbjct: 526 cgcgctgctgctgctcctgctcct 503
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>emb|AL512428.13| Human DNA sequence from clone RP11-373L11 on chromosome 6 Contains the
             3' end of the C6orf32 gene for chromosome 6 open reading
             frame 32 (PL48, DIFF40, DIFF48) and a CpG island, complete
             sequence
          Length = 70800

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   tgctgttgctcctgctcctc 142
             ||||||||||||||||||||
Sbjct: 61138 tgctgttgctcctgctcctc 61119
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 372    cggcgcgcaggcgctcgtgg 391
              ||||||||||||||||||||
Sbjct: 169566 cggcgcgcaggcgctcgtgg 169585
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>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29
          Length = 311000

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   gctggcgttcgtggccgcgc 314
             ||||||||||||||||||||
Sbjct: 95987 gctggcgttcgtggccgcgc 96006
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>gb|AF448526.1| Mytilus galloprovincialis precollagen-D mRNA, complete cds
          Length = 2848

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 122  ctgctgttgctcctgctcct 141
            ||||||||||||||||||||
Sbjct: 2130 ctgctgttgctcctgctcct 2111
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>gb|AE011626.1| Xanthomonas axonopodis pv. citri str. 306,  section 4 of 469 of the
            complete genome
          Length = 11366

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 370  gccggcgcgcaggcgctcgt 389
            ||||||||||||||||||||
Sbjct: 7816 gccggcgcgcaggcgctcgt 7835
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>ref|NM_078688.2| Drosophila melanogaster domeless CG14226-RA (dome), mRNA
          Length = 4877

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 117  tcgcgctgctgttgctcctgctcc 140
            |||||||||||||||| |||||||
Sbjct: 3716 tcgcgctgctgttgctgctgctcc 3693
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>gb|DQ355953.1| Oryza sativa (indica cultivar-group) cultivar Teqing receptor kinase
             (TRKd) pseudogene, complete sequence; and receptor kinase
             TRKa (TRKa), receptor kinase TRKe (TRKe), and receptor
             kinase TRKb (TRKb) genes, complete cds
          Length = 33301

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   cgctgctgttgctcctgctc 139
             ||||||||||||||||||||
Sbjct: 25112 cgctgctgttgctcctgctc 25093
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>gb|AY075427.1| Drosophila melanogaster LD46805 full length cDNA
          Length = 4814

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 117  tcgcgctgctgttgctcctgctcc 140
            |||||||||||||||| |||||||
Sbjct: 3637 tcgcgctgctgttgctgctgctcc 3614
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>gb|AC099011.1| Drosophila melanogaster, chromosome 2L, region 24C-24D, BAC clone
              BACR22M14, complete sequence
          Length = 173380

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    ctgctgttgctcctgctcct 141
              ||||||||||||||||||||
Sbjct: 114809 ctgctgttgctcctgctcct 114828
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>gb|AC010671.8|AC010671 Drosophila melanogaster, chromosome X, region 18E-18F, BAC clone
             BACR33M08, complete sequence
          Length = 180263

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 117   tcgcgctgctgttgctcctgctcc 140
             |||||||||||||||| |||||||
Sbjct: 74221 tcgcgctgctgttgctgctgctcc 74244
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 120      cgctgctgttgctcctgctc 139
                ||||||||||||||||||||
Sbjct: 27757829 cgctgctgttgctcctgctc 27757810



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 120      cgctgctgttgctcctgctc 139
                ||||||||||||||||||||
Sbjct: 27616985 cgctgctgttgctcctgctc 27616966
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 122      ctgctgttgctcctgctcct 141
                ||||||||||||||||||||
Sbjct: 34224367 ctgctgttgctcctgctcct 34224386
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>gb|AC008003.8|AC008003 Drosophila melanogaster, chromosome 2L, region 24D-24D, BAC clone
             BACR48D02, complete sequence
          Length = 181728

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   ctgctgttgctcctgctcct 141
             ||||||||||||||||||||
Sbjct: 29463 ctgctgttgctcctgctcct 29482
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>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete
             sequence
          Length = 163828

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   ctgctgttgctcctgctcct 141
             ||||||||||||||||||||
Sbjct: 97707 ctgctgttgctcctgctcct 97726
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>dbj|AK100155.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019E12, full
           insert sequence
          Length = 1603

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 122 ctgctgttgctcctgctcct 141
           ||||||||||||||||||||
Sbjct: 493 ctgctgttgctcctgctcct 474
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>gb|AE003578.3| Drosophila melanogaster chromosome 2L, section 13 of 83 of the complete
              sequence
          Length = 295211

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    ctgctgttgctcctgctcct 141
              ||||||||||||||||||||
Sbjct: 245374 ctgctgttgctcctgctcct 245393
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>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete
              sequence
          Length = 346474

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 117    tcgcgctgctgttgctcctgctcc 140
              |||||||||||||||| |||||||
Sbjct: 324134 tcgcgctgctgttgctgctgctcc 324157
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 365     gcatggccggcgcgcaggcgctcg 388
               ||||||||||||| ||||||||||
Sbjct: 3557991 gcatggccggcgcccaggcgctcg 3557968
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>gb|AC004279.1|AC004279 Drosophila melanogaster DNA sequence (P1 DS06502 (D146)), complete
             sequence
          Length = 85338

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   ctgctgttgctcctgctcct 141
             ||||||||||||||||||||
Sbjct: 61765 ctgctgttgctcctgctcct 61784
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 120      cgctgctgttgctcctgctc 139
                ||||||||||||||||||||
Sbjct: 27781817 cgctgctgttgctcctgctc 27781798



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 120      cgctgctgttgctcctgctc 139
                ||||||||||||||||||||
Sbjct: 27640973 cgctgctgttgctcctgctc 27640954
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>gb|AY147847.1| Drosophila melanogaster cytokine receptor domeless (dome) mRNA,
            complete cds
          Length = 4805

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 117  tcgcgctgctgttgctcctgctcc 140
            |||||||||||||||| |||||||
Sbjct: 3648 tcgcgctgctgttgctgctgctcc 3625
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>emb|AJ420377.1|DME420377 Drosophila melanogaster mRNA for putative interleukine JAK/STAT
            receptor (dome gene)
          Length = 4830

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 117  tcgcgctgctgttgctcctgctcc 140
            |||||||||||||||| |||||||
Sbjct: 3648 tcgcgctgctgttgctgctgctcc 3625
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>dbj|AB032799.1| Chromobacterium violaceum violacein biosynthetic gene cluster (vio A,
            vio B, vio C, vio D), complete cds
          Length = 9077

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 365  gcatggccggcgcgcaggcgctcg 388
            ||||||||||||| ||||||||||
Sbjct: 8849 gcatggccggcgcccaggcgctcg 8872


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,795,274
Number of Sequences: 3902068
Number of extensions: 1795274
Number of successful extensions: 52501
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 51614
Number of HSP's gapped (non-prelim): 879
length of query: 412
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 390
effective length of database: 17,147,199,772
effective search space: 6687407911080
effective search space used: 6687407911080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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