ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast16d05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY857762.1| Triticum monococcum peroxidase 8 (POX8) mRNA, com... 311 6e-82
2ref|NM_183815.1| Oryza sativa (japonica cultivar-group), predic... 92 1e-15
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 92 1e-15
4dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic D... 92 1e-15
5dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic D... 92 1e-15
6dbj|AK121616.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 1e-15
7tpe|BN000543.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 92 1e-15
8emb|AJ401274.1|ZMA401274 Zea mays mRNA for peroxidase (pox1 gene) 86 6e-14
9ref|NM_183810.1| Oryza sativa (japonica cultivar-group), predic... 80 4e-12
10dbj|AK068894.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 4e-12
11tpe|BN000541.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 80 4e-12
12ref|NM_183816.1| Oryza sativa (japonica cultivar-group), predic... 76 6e-11
13dbj|AK099187.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 6e-11
14dbj|AK070715.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 6e-11
15tpe|BN000544.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 76 6e-11
16dbj|AK060115.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.013
17gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 44 0.20
18ref|NM_188704.1| Oryza sativa (japonica cultivar-group), predic... 42 0.80
19ref|XM_475582.1| Oryza sativa (japonica cultivar-group), predic... 42 0.80
20gb|BC056999.1| Mus musculus neuropathy target esterase, mRNA (cD... 42 0.80
21gb|BC054789.1| Mus musculus neuropathy target esterase, mRNA (cD... 42 0.80
22emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete ... 42 0.80
23dbj|AK162641.1| Mus musculus adult male bone cDNA, RIKEN full-le... 42 0.80
24dbj|AK040720.1| Mus musculus adult male aorta and vein cDNA, RIK... 42 0.80
25dbj|AK089095.1| Mus musculus 2 days neonate thymus thymic cells ... 42 0.80
26dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.80
27dbj|AP003210.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.80
28dbj|AP005930.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.80
29dbj|AK122130.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.80
30dbj|AK067723.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.80
31gb|AF173829.1|AF173829 Mus musculus neuropathy target esterase h... 42 0.80
32ref|NM_015801.1| Mus musculus neuropathy target esterase (Nte), ... 42 0.80
33gb|AC170806.2| Mus musculus BAC clone RP24-363P6 from chromosome... 42 0.80
34gb|AC105262.3| Oryza sativa (japonica cultivar-group) chromosome... 42 0.80
35gb|AY816748.1| Synthetic construct clone pcNiV-Fopt C-terminal-A... 40 3.2
36gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 3.2
37gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 3.2
38gb|AC132936.9| Homo sapiens chromosome 11, clone RP13-569C6, com... 40 3.2
39dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 3.2
40dbj|AP006623.1| Homo sapiens genomic DNA, chromosome 11, clone:R... 40 3.2
41gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 3.2 
>gb|AY857762.1| Triticum monococcum peroxidase 8 (POX8) mRNA, complete cds
          Length = 1282

 Score =  311 bits (157), Expect = 6e-82
 Identities = 175/181 (96%)
 Strand = Plus / Plus

                                                                       
Query: 66  ccatggcgagcagcggcagcctggccggtctggcggtgctgctcaccgccgtgctgtgcc 125
           ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  ccatggcgagcagcggcgggctggccggtctggcggtgctgctcaccgccgtgctgtgcc 122

                                                                       
Query: 126 tgcagctgccggtccacagccgcgcccagctgcgcgtcgggttctacaacaccacctgcc 185
           ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 123 tgcagctgccggtccacagccgcgcgcagctgcgcgtggggttctacaacaccacctgcc 182

                                                                       
Query: 186 ccaacgccgaggccatcgtccggcaggccgtcaccgccgccttcgccaccaactccggcg 245
           |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 183 ccaacgccgaggccatcgtccggcaggccgtcacggccgccttcgccaccaaccccggcg 242

            
Query: 246 t 246
           |
Sbjct: 243 t 243
to top
>ref|NM_183815.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1071

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 88/102 (86%)
 Strand = Plus / Plus

                                                                       
Query: 143 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 202
           ||||||| ||||||||  || |||||||||||||||| ||||||||| |||||| |  | 
Sbjct: 73  agccgcggccagctgcaggtggggttctacaacaccagctgccccaatgccgagacgctg 132

                                                     
Query: 203 gtccggcaggccgtcaccgccgccttcgccaccaactccggc 244
           ||||||||||||||||||  ||||||||||| | ||||||||
Sbjct: 133 gtccggcaggccgtcaccaacgccttcgccaacgactccggc 174
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 88/102 (86%)
 Strand = Plus / Plus

                                                                            
Query: 143      agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 202
                ||||||| ||||||||  || |||||||||||||||| ||||||||| |||||| |  | 
Sbjct: 12534345 agccgcggccagctgcaggtggggttctacaacaccagctgccccaatgccgagacgctg 12534404

                                                          
Query: 203      gtccggcaggccgtcaccgccgccttcgccaccaactccggc 244
                ||||||||||||||||||  ||||||||||| | ||||||||
Sbjct: 12534405 gtccggcaggccgtcaccaacgccttcgccaacgactccggc 12534446



 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                            
Query: 158      cgcgtcgggttctacaacaccacctgccccaacgccgaggccatcgtccggcaggccgtc 217
                ||||||||||||||| | | || ||||||||||||||||||  ||||||| |||||||||
Sbjct: 12482977 cgcgtcgggttctaccagagcagctgccccaacgccgaggcgctcgtccgccaggccgtc 12483036

                                
Query: 218      accgccgccttcgcca 233
                 |||| ||||||||||
Sbjct: 12483037 gccgcggccttcgcca 12483052



 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 86/102 (84%)
 Strand = Plus / Plus

                                                                            
Query: 143      agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 202
                ||||| || |||||||  || |||||||||||||| | |||||||| |||||||||  | 
Sbjct: 12547310 agccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggcgctg 12547369

                                                          
Query: 203      gtccggcaggccgtcaccgccgccttcgccaccaactccggc 244
                |||||||||||||||   |||||| |||||| ||||||||||
Sbjct: 12547370 gtccggcaggccgtcgtggccgccgtcgccaacaactccggc 12547411



 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 220     cgccgccttcgccaccaactccggc 244
               |||||||||||||||| ||||||||
Sbjct: 7739236 cgccgccttcgccaccgactccggc 7739212
to top
>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0537A05
          Length = 152396

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 88/102 (86%)
 Strand = Plus / Plus

                                                                         
Query: 143   agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 202
             ||||||| ||||||||  || |||||||||||||||| ||||||||| |||||| |  | 
Sbjct: 45955 agccgcggccagctgcaggtggggttctacaacaccagctgccccaatgccgagacgctg 46014

                                                       
Query: 203   gtccggcaggccgtcaccgccgccttcgccaccaactccggc 244
             ||||||||||||||||||  ||||||||||| | ||||||||
Sbjct: 46015 gtccggcaggccgtcaccaacgccttcgccaacgactccggc 46056



 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 86/102 (84%)
 Strand = Plus / Plus

                                                                         
Query: 143   agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 202
             ||||| || |||||||  || |||||||||||||| | |||||||| |||||||||  | 
Sbjct: 58920 agccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggcgctg 58979

                                                       
Query: 203   gtccggcaggccgtcaccgccgccttcgccaccaactccggc 244
             |||||||||||||||   |||||| |||||| ||||||||||
Sbjct: 58980 gtccggcaggccgtcgtggccgccgtcgccaacaactccggc 59021
to top
>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1135C02
          Length = 152306

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 88/102 (86%)
 Strand = Plus / Plus

                                                                          
Query: 143    agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 202
              ||||||| ||||||||  || |||||||||||||||| ||||||||| |||||| |  | 
Sbjct: 119960 agccgcggccagctgcaggtggggttctacaacaccagctgccccaatgccgagacgctg 120019

                                                        
Query: 203    gtccggcaggccgtcaccgccgccttcgccaccaactccggc 244
              ||||||||||||||||||  ||||||||||| | ||||||||
Sbjct: 120020 gtccggcaggccgtcaccaacgccttcgccaacgactccggc 120061



 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                         
Query: 158   cgcgtcgggttctacaacaccacctgccccaacgccgaggccatcgtccggcaggccgtc 217
             ||||||||||||||| | | || ||||||||||||||||||  ||||||| |||||||||
Sbjct: 68592 cgcgtcgggttctaccagagcagctgccccaacgccgaggcgctcgtccgccaggccgtc 68651

                             
Query: 218   accgccgccttcgcca 233
              |||| ||||||||||
Sbjct: 68652 gccgcggccttcgcca 68667



 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 86/102 (84%)
 Strand = Plus / Plus

                                                                          
Query: 143    agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 202
              ||||| || |||||||  || |||||||||||||| | |||||||| |||||||||  | 
Sbjct: 132925 agccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggcgctg 132984

                                                        
Query: 203    gtccggcaggccgtcaccgccgccttcgccaccaactccggc 244
              |||||||||||||||   |||||| |||||| ||||||||||
Sbjct: 132985 gtccggcaggccgtcgtggccgccgtcgccaacaactccggc 133026
to top
>dbj|AK121616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044C11, full
           insert sequence
          Length = 5938

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 88/102 (86%)
 Strand = Plus / Plus

                                                                       
Query: 143 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 202
           ||||||| ||||||||  || |||||||||||||||| ||||||||| |||||| |  | 
Sbjct: 135 agccgcggccagctgcaggtggggttctacaacaccagctgccccaatgccgagacgctg 194

                                                     
Query: 203 gtccggcaggccgtcaccgccgccttcgccaccaactccggc 244
           ||||||||||||||||||  ||||||||||| | ||||||||
Sbjct: 195 gtccggcaggccgtcaccaacgccttcgccaacgactccggc 236
to top
>tpe|BN000543.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx14 gene for
           class III peroxidase 14 precursor, exons 1-3
          Length = 5620

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 88/102 (86%)
 Strand = Plus / Plus

                                                                       
Query: 143 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 202
           ||||||| ||||||||  || |||||||||||||||| ||||||||| |||||| |  | 
Sbjct: 73  agccgcggccagctgcaggtggggttctacaacaccagctgccccaatgccgagacgctg 132

                                                     
Query: 203 gtccggcaggccgtcaccgccgccttcgccaccaactccggc 244
           ||||||||||||||||||  ||||||||||| | ||||||||
Sbjct: 133 gtccggcaggccgtcaccaacgccttcgccaacgactccggc 174
to top
>emb|AJ401274.1|ZMA401274 Zea mays mRNA for peroxidase (pox1 gene)
          Length = 1398

 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 61/67 (91%)
 Strand = Plus / Plus

                                                                       
Query: 167 ttctacaacaccacctgccccaacgccgaggccatcgtccggcaggccgtcaccgccgcc 226
           |||||| |||||| ||||||||||||||||||| ||||||| ||||||||| | ||||||
Sbjct: 168 ttctacgacaccagctgccccaacgccgaggccctcgtccgccaggccgtcgcggccgcc 227

                  
Query: 227 ttcgcca 233
           |||||||
Sbjct: 228 ttcgcca 234
to top
>ref|NM_183810.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1041

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                       
Query: 158 cgcgtcgggttctacaacaccacctgccccaacgccgaggccatcgtccggcaggccgtc 217
           ||||||||||||||| | | || ||||||||||||||||||  ||||||| |||||||||
Sbjct: 70  cgcgtcgggttctaccagagcagctgccccaacgccgaggcgctcgtccgccaggccgtc 129

                           
Query: 218 accgccgccttcgcca 233
            |||| ||||||||||
Sbjct: 130 gccgcggccttcgcca 145
to top
>dbj|AK068894.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001H23, full
           insert sequence
          Length = 1382

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                       
Query: 158 cgcgtcgggttctacaacaccacctgccccaacgccgaggccatcgtccggcaggccgtc 217
           ||||||||||||||| | | || ||||||||||||||||||  ||||||| |||||||||
Sbjct: 177 cgcgtcgggttctaccagagcagctgccccaacgccgaggcgctcgtccgccaggccgtc 236

                           
Query: 218 accgccgccttcgcca 233
            |||| ||||||||||
Sbjct: 237 gccgcggccttcgcca 252
to top
>tpe|BN000541.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx12 gene for
           class III peroxidase 12 precursor, exons 1-3
          Length = 3928

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                       
Query: 158 cgcgtcgggttctacaacaccacctgccccaacgccgaggccatcgtccggcaggccgtc 217
           ||||||||||||||| | | || ||||||||||||||||||  ||||||| |||||||||
Sbjct: 70  cgcgtcgggttctaccagagcagctgccccaacgccgaggcgctcgtccgccaggccgtc 129

                           
Query: 218 accgccgccttcgcca 233
            |||| ||||||||||
Sbjct: 130 gccgcggccttcgcca 145
to top
>ref|NM_183816.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1062

 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 86/102 (84%)
 Strand = Plus / Plus

                                                                       
Query: 143 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 202
           ||||| || |||||||  || |||||||||||||| | |||||||| |||||||||  | 
Sbjct: 76  agccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggcgctg 135

                                                     
Query: 203 gtccggcaggccgtcaccgccgccttcgccaccaactccggc 244
           |||||||||||||||   |||||| |||||| ||||||||||
Sbjct: 136 gtccggcaggccgtcgtggccgccgtcgccaacaactccggc 177
to top
>dbj|AK099187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107P11, full
           insert sequence
          Length = 1271

 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 86/102 (84%)
 Strand = Plus / Plus

                                                                       
Query: 143 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 202
           ||||| || |||||||  || |||||||||||||| | |||||||| |||||||||  | 
Sbjct: 146 agccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggcgctg 205

                                                     
Query: 203 gtccggcaggccgtcaccgccgccttcgccaccaactccggc 244
           |||||||||||||||   |||||| |||||| ||||||||||
Sbjct: 206 gtccggcaggccgtcgtggccgccgtcgccaacaactccggc 247
to top
>dbj|AK070715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058L02, full
           insert sequence
          Length = 1492

 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 86/102 (84%)
 Strand = Plus / Plus

                                                                       
Query: 143 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 202
           ||||| || |||||||  || |||||||||||||| | |||||||| |||||||||  | 
Sbjct: 151 agccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggcgctg 210

                                                     
Query: 203 gtccggcaggccgtcaccgccgccttcgccaccaactccggc 244
           |||||||||||||||   |||||| |||||| ||||||||||
Sbjct: 211 gtccggcaggccgtcgtggccgccgtcgccaacaactccggc 252
to top
>tpe|BN000544.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx15 gene for
           class III peroxidase 15 precursor, exons 1-3
          Length = 5322

 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 86/102 (84%)
 Strand = Plus / Plus

                                                                       
Query: 143 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 202
           ||||| || |||||||  || |||||||||||||| | |||||||| |||||||||  | 
Sbjct: 76  agccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggcgctg 135

                                                     
Query: 203 gtccggcaggccgtcaccgccgccttcgccaccaactccggc 244
           |||||||||||||||   |||||| |||||| ||||||||||
Sbjct: 136 gtccggcaggccgtcgtggccgccgtcgccaacaactccggc 177
to top
>dbj|AK060115.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E07, full
           insert sequence
          Length = 1008

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 143 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggc 198
           ||||| || |||||||  || |||||||||||||| | |||||||| |||||||||
Sbjct: 149 agccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggc 204
to top
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 223     cgccttcgccaccaactccggc 244
               ||||||||||||||||||||||
Sbjct: 2171596 cgccttcgccaccaactccggc 2171617
to top
>ref|NM_188704.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3009

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 220  cgccgccttcgccaccaactccggc 244
            |||||||||||||||| ||||||||
Sbjct: 1005 cgccgccttcgccaccgactccggc 981
to top
>ref|XM_475582.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1335

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 212  gccgtcaccgccgccttcgcc 232
            |||||||||||||||||||||
Sbjct: 1034 gccgtcaccgccgccttcgcc 1014
to top
>gb|BC056999.1| Mus musculus neuropathy target esterase, mRNA (cDNA clone MGC:66981
           IMAGE:6831507), complete cds
          Length = 4461

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 96  tggcggtgctgctcaccgccgtgct 120
           ||||||||||| |||||||||||||
Sbjct: 289 tggcggtgctggtcaccgccgtgct 313
to top
>gb|BC054789.1| Mus musculus neuropathy target esterase, mRNA (cDNA clone MGC:65634
           IMAGE:6831507), complete cds
          Length = 4461

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 96  tggcggtgctgctcaccgccgtgct 120
           ||||||||||| |||||||||||||
Sbjct: 289 tggcggtgctggtcaccgccgtgct 313
to top
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29
          Length = 313800

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 212    gccgtcaccgccgccttcgcc 232
              |||||||||||||||||||||
Sbjct: 121883 gccgtcaccgccgccttcgcc 121863
to top
>dbj|AK162641.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched
           library, clone:9830134O04 product:neuropathy target
           esterase, full insert sequence
          Length = 3840

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 96  tggcggtgctgctcaccgccgtgct 120
           ||||||||||| |||||||||||||
Sbjct: 244 tggcggtgctggtcaccgccgtgct 268
to top
>dbj|AK040720.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
           enriched library, clone:A530020D05 product:neuropathy
           target esterase, full insert sequence
          Length = 2892

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 96  tggcggtgctgctcaccgccgtgct 120
           ||||||||||| |||||||||||||
Sbjct: 325 tggcggtgctggtcaccgccgtgct 349
to top
>dbj|AK089095.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430039F18
           product:neuropathy target esterase, full insert sequence
          Length = 4265

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 96  tggcggtgctgctcaccgccgtgct 120
           ||||||||||| |||||||||||||
Sbjct: 232 tggcggtgctggtcaccgccgtgct 256
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 212     gccgtcaccgccgccttcgcc 232
               |||||||||||||||||||||
Sbjct: 2314988 gccgtcaccgccgccttcgcc 2315008
to top
>dbj|AP003210.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0010K01
          Length = 144404

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 220   cgccgccttcgccaccaactccggc 244
             |||||||||||||||| ||||||||
Sbjct: 41817 cgccgccttcgccaccgactccggc 41793
to top
>dbj|AP005930.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0502B12
          Length = 197160

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 226    cttcgccaccaactccggcgt 246
              |||||||||||||||||||||
Sbjct: 109477 cttcgccaccaactccggcgt 109457
to top
>dbj|AK122130.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133B05, full
            insert sequence
          Length = 3604

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 220  cgccgccttcgccaccaactccggc 244
            |||||||||||||||| ||||||||
Sbjct: 1164 cgccgccttcgccaccgactccggc 1140
to top
>dbj|AK067723.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116J03, full
            insert sequence
          Length = 3671

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 220  cgccgccttcgccaccaactccggc 244
            |||||||||||||||| ||||||||
Sbjct: 1109 cgccgccttcgccaccgactccggc 1085
to top
>gb|AF173829.1|AF173829 Mus musculus neuropathy target esterase homolog mRNA, complete cds
          Length = 4459

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 96  tggcggtgctgctcaccgccgtgct 120
           ||||||||||| |||||||||||||
Sbjct: 271 tggcggtgctggtcaccgccgtgct 295
to top
>ref|NM_015801.1| Mus musculus neuropathy target esterase (Nte), mRNA
          Length = 4459

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 96  tggcggtgctgctcaccgccgtgct 120
           ||||||||||| |||||||||||||
Sbjct: 271 tggcggtgctggtcaccgccgtgct 295
to top
>gb|AC170806.2| Mus musculus BAC clone RP24-363P6 from chromosome 8, complete sequence
          Length = 182564

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 96    tggcggtgctgctcaccgccgtgct 120
             ||||||||||| |||||||||||||
Sbjct: 43546 tggcggtgctggtcaccgccgtgct 43570
to top
>gb|AC105262.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1489_G03,
             complete sequence
          Length = 107870

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 212   gccgtcaccgccgccttcgcc 232
             |||||||||||||||||||||
Sbjct: 42903 gccgtcaccgccgccttcgcc 42923
to top
>gb|AY816748.1| Synthetic construct clone pcNiV-Fopt C-terminal-Au1-tagged F protein
            gene, complete cds
          Length = 1659

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 171  acaacaccacctgccccaacgccg 194
            |||||||||||||||||| |||||
Sbjct: 1238 acaacaccacctgccccaccgccg 1261
to top
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 211     ggccgtcaccgccgccttcgccac 234
               |||| |||||||||||||||||||
Sbjct: 3217994 ggccctcaccgccgccttcgccac 3218017
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 85     cctggccggtctggcggtgctgct 108
              ||||||||||||||| ||||||||
Sbjct: 952400 cctggccggtctggccgtgctgct 952377
to top
>gb|AC132936.9| Homo sapiens chromosome 11, clone RP13-569C6, complete sequence
          Length = 178778

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 117   tgctgtgcctgcagctgccggtcc 140
             ||||||||||||||||||| ||||
Sbjct: 65419 tgctgtgcctgcagctgcccgtcc 65442
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 190     cgccgaggccatcgtccggcaggc 213
               |||||||||||||| |||||||||
Sbjct: 4743057 cgccgaggccatcgaccggcaggc 4743034
to top
>dbj|AP006623.1| Homo sapiens genomic DNA, chromosome 11, clone:RP11-1391J07, complete
             sequence
          Length = 121103

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 117   tgctgtgcctgcagctgccggtcc 140
             ||||||||||||||||||| ||||
Sbjct: 54446 tgctgtgcctgcagctgcccgtcc 54423
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 78      gcggcagcctggccggtctg 97
               ||||||||||||||||||||
Sbjct: 4650072 gcggcagcctggccggtctg 4650053


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,758,799
Number of Sequences: 3902068
Number of extensions: 1758799
Number of successful extensions: 108445
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107660
Number of HSP's gapped (non-prelim): 785
length of query: 246
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 224
effective length of database: 17,147,199,772
effective search space: 3840972748928
effective search space used: 3840972748928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top