| Clone Name | bast16a07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 atctgtattggtgcatttaacg 290 |||||||||||||||||||||| Sbjct: 1415084 atctgtattggtgcatttaacg 1415063
>ref|XM_538237.2| PREDICTED: Canis familiaris similar to Bromodomain adjacent to zinc finger domain 2A (Transcription termination factor-I interacting protein 5) (TTF-I interacting protein 5) (Tip5) (hWALp3), transcript variant 1 (LOC481116), mRNA Length = 6023 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 ccctccccggagcagccgctc 213 ||||||||||||||||||||| Sbjct: 5614 ccctccccggagcagccgctc 5594
>ref|XM_843950.1| PREDICTED: Canis familiaris similar to Bromodomain adjacent to zinc finger domain 2A (Transcription termination factor-I interacting protein 5) (TTF-I interacting protein 5) (Tip5) (hWALp3), transcript variant 2 (LOC481116), mRNA Length = 5259 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 ccctccccggagcagccgctc 213 ||||||||||||||||||||| Sbjct: 4843 ccctccccggagcagccgctc 4823
>ref|XM_222315.3| PREDICTED: Rattus norvegicus bromodomain adjacent to zinc finger domain, 2A (predicted) (Baz2a_predicted), mRNA Length = 5430 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 193 ccctccccggagcagccgctctcgc 217 |||||||||||||||||| |||||| Sbjct: 5265 ccctccccggagcagccgttctcgc 5241
>gb|AC008742.9| Homo sapiens chromosome 19 clone CTD-2553C6, complete sequence Length = 194624 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 cccagcagtgcctccctccg 163 |||||||||||||||||||| Sbjct: 173461 cccagcagtgcctccctccg 173480
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 ccccggagcagccgctctcg 216 |||||||||||||||||||| Sbjct: 1010025 ccccggagcagccgctctcg 1010044
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 cccagcaactccgccgcccg 236 |||||||||||||||||||| Sbjct: 583783 cccagcaactccgccgcccg 583764
>dbj|AB070956.1| Streptomyces avermitilis peptide-7 biosynthetic gene cluster Length = 54101 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 ccccggagcagccgctctcg 216 |||||||||||||||||||| Sbjct: 21857 ccccggagcagccgctctcg 21876 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,432,839 Number of Sequences: 3902068 Number of extensions: 2432839 Number of successful extensions: 42537 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 42394 Number of HSP's gapped (non-prelim): 143 length of query: 374 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 352 effective length of database: 17,147,199,772 effective search space: 6035814319744 effective search space used: 6035814319744 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)