Clone Information

BLAST Search Result

Clone Name	bast15h10
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	IAA11_ORYSA (Q75GK0) Auxin-responsive protein IAA11 (Indoleaceti...	66	2e-11
2	IAA30_ORYSA (P0C132) Auxin-responsive protein IAA30 (Indoleaceti...	58	5e-09
3	IAA16_ARATH (O24407) Auxin-responsive protein IAA16 (Indoleaceti...	54	1e-07
4	IAA13_ORYSA (Q7Y1Y5) Auxin-responsive protein IAA13 (Indoleaceti...	52	4e-07
5	AUX28_SOYBN (P13089) Auxin-induced protein AUX28	45	5e-05
6	IAA7_ARATH (Q38825) Auxin-responsive protein IAA7 (Indoleacetic ...	43	2e-04
7	IAA14_ARATH (Q38832) Auxin-responsive protein IAA14 (Indoleaceti...	42	5e-04
8	IAA17_ARATH (P93830) Auxin-responsive protein IAA17 (Indoleaceti...	39	0.004
9	IAA1_ARATH (P49677) Auxin-responsive protein IAA1 (Indoleacetic ...	33	0.21
10	AX22D_PHAAU (O24542) Auxin-induced protein 22D (Indole-3-acetic ...	32	0.47
11	AX22C_PHAAU (O24541) Auxin-induced protein 22C (Indole-3-acetic ...	31	0.61
12	IAA6_ARATH (Q38824) Auxin-responsive protein IAA6 (Indoleacetic ...	31	0.80
13	IAA5_ARATH (P33078) Auxin-responsive protein IAA5 (Indoleacetic ...	31	0.80
14	IAA15_ARATH (Q9C966) Auxin-responsive protein IAA15 (Indoleaceti...	30	1.0
15	IAA19_ARATH (O24409) Auxin-responsive protein IAA19 (Indoleaceti...	30	1.4
16	IAA27_ARATH (Q9ZSY8) Auxin-responsive protein IAA27 (Indoleaceti...	30	1.8
17	HTS1_COCCA (Q01886) HC-toxin synthetase (EC 6.3.2.-) (HTS)	30	1.8
18	AUX22_SOYBN (P13088) Auxin-induced protein AUX22	29	2.3
19	IYD1_PIG (Q6TA49) Iodotyrosine dehalogenase 1 precursor (EC 1.-....	29	2.3
20	AX22E_PHAAU (O24543) Auxin-induced protein 22E (Indole-3-acetic ...	29	2.3
21	OPSUV_APIME (O61303) Opsin, ultraviolet-sensitive (AMUVOP) (BUVOPS)	29	3.0
22	FOLC_BACSU (Q05865) Folylpolyglutamate synthase (EC 6.3.2.17) (F...	29	3.0
23	MUTS_PROMA (Q7V9M5) DNA mismatch repair protein mutS	29	3.0
24	IAA21_ORYSA (Q5Z749) Auxin-responsive protein IAA21 (Indoleaceti...	29	3.0
25	IAA2_ARATH (P49678) Auxin-responsive protein IAA2 (Indoleacetic ...	29	3.0
26	REC8L_MOUSE (Q8C5S7) Meiotic recombination protein REC8-like 1 (...	28	4.0
27	IAA3_ARATH (Q38822) Auxin-responsive protein IAA3 (Indoleacetic ...	28	4.0
28	INSRR_CAVPO (P14617) Insulin receptor-related protein precursor ...	28	5.2
29	CXA12_HUMAN (Q5T442) Gap junction alpha-12 protein (Connexin-47)...	28	5.2
30	CLC4G_HUMAN (Q6UXB4) C-type lectin domain family 4 member G	28	6.8
31	AX22A_PHAAU (P32293) Auxin-induced protein 22A (Indole-3-acetic ...	28	6.8
32	IF2_COREF (Q8FPA7) Translation initiation factor IF-2	28	6.8
33	CY553_DESVH (P04032) Cytochrome c-553 precursor (Cytochrome c553...	27	8.8
34	IAA4_PEA (P49679) Auxin-induced protein IAA4	27	8.8
35	IAA15_ORYSA (Q6AT10) Auxin-responsive protein IAA15 (Indoleaceti...	27	8.8
36	GCSP_BRUSU (Q8FVU9) Glycine dehydrogenase [decarboxylating] (EC ...	27	8.8
37	GCSP_BRUME (P62921) Glycine dehydrogenase [decarboxylating] (EC ...	27	8.8
38	GCSP_BRUAB (P62920) Glycine dehydrogenase [decarboxylating] (EC ...	27	8.8
39	GCSP_BRUA2 (Q2YKX9) Glycine dehydrogenase [decarboxylating] (EC ...	27	8.8
40	VE2_HPV23 (P50769) Regulatory protein E2	27	8.8
41	CLPX_HUMAN (O76031) ATP-dependent Clp protease ATP-binding subun...	27	8.8
42	FILA_HUMAN (P20930) Filaggrin	24	9.1

>IAA11_ORYSA (Q75GK0) Auxin-responsive protein IAA11 (Indoleacetic acid-induced|
           protein 11)
          Length = 233

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 35/44 (79%), Positives = 37/44 (84%)
 Frame = +3

Query: 171 MAGLGFEETELRLGLPGGGNEAEEAVRSSGKRGYAETIDLMLKL 302
           MAGLGF+ETELRLGLPG G   E A RSSGKRG+AETIDL LKL
Sbjct: 1   MAGLGFDETELRLGLPGAG---ELAARSSGKRGFAETIDLKLKL 41

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>IAA30_ORYSA (P0C132) Auxin-responsive protein IAA30 (Indoleacetic acid-induced|
           protein 30)
          Length = 277

 Score = 58.2 bits (139), Expect = 5e-09
 Identities = 31/47 (65%), Positives = 34/47 (72%), Gaps = 4/47 (8%)
 Frame = +3

Query: 174 AGLGFEETELRLGLPGGGNEAEEAV----RSSGKRGYAETIDLMLKL 302
           A L FE TELRLGLPGGG + + A      SSGKRG+AETIDL LKL
Sbjct: 3   ADLAFEATELRLGLPGGGGDGDAAAAAARSSSGKRGFAETIDLKLKL 49

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>IAA16_ARATH (O24407) Auxin-responsive protein IAA16 (Indoleacetic acid-induced|
           protein 16)
          Length = 236

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = +3

Query: 180 LGFEETELRLGLPGGGNEAEEAVRSSGKRGYAETIDLMLKL 302
           + FE TELRLGLPGG +  E A +++GKRG++ET+DL L L
Sbjct: 2   INFEATELRLGLPGGNHGGEMAGKNNGKRGFSETVDLKLNL 42

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>IAA13_ORYSA (Q7Y1Y5) Auxin-responsive protein IAA13 (Indoleacetic acid-induced|
           protein 13)
          Length = 236

 Score = 51.6 bits (122), Expect = 4e-07
 Identities = 25/36 (69%), Positives = 27/36 (75%)
 Frame = +3

Query: 195 TELRLGLPGGGNEAEEAVRSSGKRGYAETIDLMLKL 302
           TELRLGLPGGG  A EA   + KRG+ ETIDL LKL
Sbjct: 10  TELRLGLPGGGGGAAEAAAKAAKRGFEETIDLKLKL 45

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>AUX28_SOYBN (P13089) Auxin-induced protein AUX28|
          Length = 243

 Score = 44.7 bits (104), Expect = 5e-05
 Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 11/52 (21%)
 Frame = +3

Query: 180 LGFEETELRLGLPGGGNEAEEAVRSSGKRGYAE-----------TIDLMLKL 302
           +GFEETELRLGLPG G   E  +R   KRG++E           T+DLML L
Sbjct: 1   MGFEETELRLGLPGNGGTEEVLIR---KRGFSETETGHEDESATTVDLMLNL 49

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>IAA7_ARATH (Q38825) Auxin-responsive protein IAA7 (Indoleacetic acid-induced|
           protein 7) (Auxin resistant 2)
          Length = 243

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
 Frame = +3

Query: 180 LGFEETELRLGLPGGGNEAEEAVRSS--GKRGYAETIDLMLKL 302
           +  + TEL LGLPGG    E   +S+   KRG++ET+DLML L
Sbjct: 6   MNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETVDLMLNL 48

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>IAA14_ARATH (Q38832) Auxin-responsive protein IAA14 (Indoleacetic acid-induced|
           protein 14) (SOLITARY-ROOT protein)
          Length = 228

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
 Frame = +3

Query: 180 LGFEETELRLGLPGGGNEAEEAVRS--SGKRGYAETIDLMLKL 302
           +  +ETEL LGLPGG    E   +S    KRG++ET+DL L L
Sbjct: 1   MNLKETELCLGLPGGTETVESPAKSGVGNKRGFSETVDLKLNL 43

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>IAA17_ARATH (P93830) Auxin-responsive protein IAA17 (Indoleacetic acid-induced|
           protein 17) (Auxin response 3)
          Length = 229

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 21/41 (51%), Positives = 25/41 (60%)
 Frame = +3

Query: 180 LGFEETELRLGLPGGGNEAEEAVRSSGKRGYAETIDLMLKL 302
           L   ETEL LGLPGG   A     +  KRG++ET+DL L L
Sbjct: 7   LNLRETELCLGLPGGDTVAPV---TGNKRGFSETVDLKLNL 44

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>IAA1_ARATH (P49677) Auxin-responsive protein IAA1 (Indoleacetic acid-induced|
           protein 1)
          Length = 168

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
 Frame = +3

Query: 177 GLGFEETELRLGLPGGGNEAE---EAVRSSGKR 266
           GL  ++TELRLGLPG   E +     VRS+ KR
Sbjct: 6   GLNLKDTELRLGLPGAQEEQQLELSCVRSNNKR 38

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>AX22D_PHAAU (O24542) Auxin-induced protein 22D (Indole-3-acetic acid-induced|
           protein ARG13)
          Length = 193

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +3

Query: 180 LGFEETELRLGLPGGGNEAEEAVRSSGKRGYAETID 287
           L  + TELRLGLPG     + A   S KR   E  D
Sbjct: 12  LNLKATELRLGLPGSDEPEKRATARSNKRSSPEASD 47

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>AX22C_PHAAU (O24541) Auxin-induced protein 22C (Indole-3-acetic acid-induced|
           protein ARG12)
          Length = 188

 Score = 31.2 bits (69), Expect = 0.61
 Identities = 14/18 (77%), Positives = 14/18 (77%)
 Frame = +3

Query: 180 LGFEETELRLGLPGGGNE 233
           LG E TELRLGLPG G E
Sbjct: 6   LGLEITELRLGLPGAGGE 23

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>IAA6_ARATH (Q38824) Auxin-responsive protein IAA6 (Indoleacetic acid-induced|
           protein 6)
          Length = 189

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 19/39 (48%), Positives = 23/39 (58%)
 Frame = +3

Query: 177 GLGFEETELRLGLPGGGNEAEEAVRSSGKRGYAETIDLM 293
           GL  E TELRLGLP G N +E +V  S K+      D+M
Sbjct: 5   GLALEITELRLGLP-GDNYSEISVCGSSKKKKRVLSDMM 42

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>IAA5_ARATH (P33078) Auxin-responsive protein IAA5 (Indoleacetic acid-induced|
           protein 5) (Auxin-induced protein AUX2-27)
          Length = 163

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 18/40 (45%), Positives = 26/40 (65%)
 Frame = +3

Query: 180 LGFEETELRLGLPGGGNEAEEAVRSSGKRGYAETIDLMLK 299
           LG E TELRLGLPG    + E++  SGK+  +  +++ LK
Sbjct: 8   LGLEITELRLGLPGDIVVSGESI--SGKKRASPEVEIDLK 45

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>IAA15_ARATH (Q9C966) Auxin-responsive protein IAA15 (Indoleacetic acid-induced|
           protein 15)
          Length = 179

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 195 TELRLGLPGGGNEAEEAVRSSG-KRGYAETIDLML 296
           TEL L LPG    A E  +  G KR + ET+DL L
Sbjct: 19  TELTLALPGTPTNASEGPKKFGNKRRFLETVDLKL 53

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>IAA19_ARATH (O24409) Auxin-responsive protein IAA19 (Indoleacetic acid-induced|
           protein 19) (MASSUGU2 protein)
          Length = 197

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = +3

Query: 177 GLGFEETELRLGLPGGGNEAEEAVRSSGKRGYAE 278
           GLG E TELRLGLPG     + A +   KR + E
Sbjct: 5   GLGLEITELRLGLPG----RDVAEKMMKKRAFTE 34

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>IAA27_ARATH (Q9ZSY8) Auxin-responsive protein IAA27 (Indoleacetic acid-induced|
           protein 27) (Auxin-induced protein 27)
           (Phytochrome-associated protein 2)
          Length = 305

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = +3

Query: 177 GLGFEETELRLGLPGGGNEAEEAVRS 254
           GL F+ TELRLGLP  G+E+ E V S
Sbjct: 37  GLNFKATELRLGLP--GSESPERVDS 60

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>HTS1_COCCA (Q01886) HC-toxin synthetase (EC 6.3.2.-) (HTS)|
          Length = 5218

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
 Frame = -1

Query: 251  PHRLLSLVAAAWQA-EPQLGLLEPEARHWSPAPMRQPPLGFLFAPCELAFACLLLLGVWL 75
            P  +L      +QA E +  +L+PE+ H   A   Q P    F   E++ A L    + L
Sbjct: 1203 PAEILFNYEGRYQAMESEQTVLKPESWHAGEASKDQDPGLRRFCLFEISTAVLPDGQLHL 1262

Query: 74   NCEQSTNRREDGYKRVWL 21
             C  + N R  G  R+WL
Sbjct: 1263 TCSWNKNMRHQGRIRLWL 1280

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>AUX22_SOYBN (P13088) Auxin-induced protein AUX22|
          Length = 195

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +3

Query: 177 GLGFEETELRLGLPGGGNEAEEAVRSSGKRGYAETID 287
           GLG E TELRLGLP   ++     + + K+     ID
Sbjct: 5   GLGLEITELRLGLPDAEHQVSVVNKKNEKKRAFSEID 41

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>IYD1_PIG (Q6TA49) Iodotyrosine dehalogenase 1 precursor (EC 1.-.-.-) (IYD-1)|
          Length = 289

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -1

Query: 134 FLFAPCELAFACLLLLGVWLNCEQSTNRRED 42
           FL  P  +A  C+L++ ++ N + +T RRE+
Sbjct: 2   FLLTPVLVAVVCILMVWIFKNADGATKRREE 32

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>AX22E_PHAAU (O24543) Auxin-induced protein 22E (Indole-3-acetic acid-induced|
           protein ARG14)
          Length = 203

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 6/39 (15%)
 Frame = +3

Query: 180 LGFEETELRLGLPGGGNEAEE------AVRSSGKRGYAE 278
           L    TELRLGLPG     E+       VRSS KR   E
Sbjct: 8   LNLRATELRLGLPGSDEPQEKRPCSGSVVRSSNKRSSPE 46

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>OPSUV_APIME (O61303) Opsin, ultraviolet-sensitive (AMUVOP) (BUVOPS)|
          Length = 371

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
 Frame = -1

Query: 263 LAGAPHRLLSLVAAAWQAEPQLGLLEPEARHWSPAPMRQPPLGFLFAPCELAFACLLLLG 84
           L   P RLL      W    +  +  PE  HW   P   P L +L A   + F  L LLG
Sbjct: 13  LPAGPPRLLG-----WNVPAEELIHIPE--HWLVYPEPNPSLHYLLALLYILFTFLALLG 65

Query: 83  ----VWLNCEQSTNR 51
               +W+ C   + R
Sbjct: 66  NGLVIWIFCAAKSLR 80

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>FOLC_BACSU (Q05865) Folylpolyglutamate synthase (EC 6.3.2.17)|
           (Folylpoly-gamma-glutamate synthetase) (FPGS)
           (Tetrahydrofolate synthase)
           (Tetrahydrofolylpolyglutamate synthase)
          Length = 430

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +2

Query: 41  HPPVYLCSAHN*AKPQAAADTRKQ 112
           HPPVYL  AHN    +  A+T KQ
Sbjct: 309 HPPVYLDGAHNEEGVEKLAETMKQ 332

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>MUTS_PROMA (Q7V9M5) DNA mismatch repair protein mutS|
          Length = 914

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
 Frame = +3

Query: 54  ICALLTIKPNPKQQQ-----TRESKFTGSE*ETQGRLP-HWSRRPMAGLGFEETELRLGL 215
           IC  L +  + K Q      T++SK + S  E +  L  H++ + + GLG  ETEL L  
Sbjct: 266 ICEQLDVDISKKWQSNRIKITQQSKTSFSLQEAKAILKKHYNLKTINGLGLNETELALRA 325

Query: 216 PGG 224
            GG
Sbjct: 326 AGG 328

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>IAA21_ORYSA (Q5Z749) Auxin-responsive protein IAA21 (Indoleacetic acid-induced|
           protein 21)
          Length = 266

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 18/36 (50%), Positives = 20/36 (55%)
 Frame = +3

Query: 195 TELRLGLPGGGNEAEEAVRSSGKRGYAETIDLMLKL 302
           TELRLGLPG    AEEA    G  G  +   L L+L
Sbjct: 22  TELRLGLPG---TAEEAESEGGGGGGTDAAPLTLEL 54

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>IAA2_ARATH (P49678) Auxin-responsive protein IAA2 (Indoleacetic acid-induced|
           protein 2)
          Length = 174

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
 Frame = +3

Query: 180 LGFEETELRLGLPGGGNEAEE-----AVRSSGKRGYAETID 287
           L  ++TEL LGLPG   + +E      V+S+ KR + ET D
Sbjct: 9   LNLKDTELCLGLPGRTEKIKEEQEVSCVKSNNKRLFEETRD 49

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>REC8L_MOUSE (Q8C5S7) Meiotic recombination protein REC8-like 1 (Cohesin Rec8p)|
          Length = 591

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 13/69 (18%)
 Frame = -1

Query: 218 WQAEPQLGL------LEPEARHWSPAPMRQPPLGFLFAPCELAFACLL-------LLGVW 78
           W  E Q+        L+  A  W   P+ QPP   L +P EL     L       LLG+W
Sbjct: 349 WDKETQISREKFEEQLQTGAHCWE-YPVAQPPKRMLTSPAELFRTPTLSGWLPPELLGLW 407

Query: 77  LNCEQSTNR 51
            +C Q   R
Sbjct: 408 THCAQVPQR 416

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>IAA3_ARATH (Q38822) Auxin-responsive protein IAA3 (Indoleacetic acid-induced|
           protein 3) (Short hypocotyl) (Suppressor of HY2)
          Length = 189

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +3

Query: 180 LGFEETELRLGLPGGGNEAEEAVRSS 257
           +  +ETELRLGLPG  N  E   R S
Sbjct: 5   VNLKETELRLGLPGTDNVCEAKERVS 30

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>INSRR_CAVPO (P14617) Insulin receptor-related protein precursor (EC 2.7.10.1)|
            (IRR) (IR-related receptor) [Contains: Insulin
            receptor-related protein alpha chain; Insulin
            receptor-related protein beta chain]
          Length = 1300

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -1

Query: 299  LQHEVDGLGVAPLAGAPHRLLSLVAAAWQAEPQL 198
            L+  +DG  +  L   PH+L  L+++ WQ  P+L
Sbjct: 1202 LKFVMDGGVLEELEDCPHQLQELMSSCWQQNPRL 1235

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>CXA12_HUMAN (Q5T442) Gap junction alpha-12 protein (Connexin-47) (Cx47)|
           (Connexin-46.6) (Cx46.6)
          Length = 439

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 16/27 (59%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +3

Query: 168 PMAGLGFEETELRLG-LPGGGNEAEEA 245
           PM GLG EE E   G   G G EAEEA
Sbjct: 146 PMLGLGEEEEEEETGAAEGAGEEAEEA 172

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>CLC4G_HUMAN (Q6UXB4) C-type lectin domain family 4 member G|
          Length = 293

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 4/29 (13%)
 Frame = +3

Query: 99  TRESKFTGSE*ETQG----RLPHWSRRPM 173
           TR SK+ GS  E  G    R  HWSRRP+
Sbjct: 4   TRYSKWGGSSEEVPGGPWGRWVHWSRRPL 32

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>AX22A_PHAAU (P32293) Auxin-induced protein 22A (Indole-3-acetic acid-induced|
           protein ARG3)
          Length = 194

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +3

Query: 177 GLGFEETELRLGLPGGGN--EAEEAVRSSGKRGYAETIDL 290
           GLG E TELRLGLP   +   A +      KR ++E  D+
Sbjct: 5   GLGLEITELRLGLPDAEHVAVANKNGEKKNKRVFSEIDDV 44

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>IF2_COREF (Q8FPA7) Translation initiation factor IF-2|
          Length = 964

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 133 KPKGGCRIGAGDQWRASGSRRPS 201
           +P+GG   GA  Q R  G RRPS
Sbjct: 251 RPQGGNAAGAASQERQGGGRRPS 273

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>CY553_DESVH (P04032) Cytochrome c-553 precursor (Cytochrome c553)|
           (Low-potential cytochrome c)
          Length = 103

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 118 VNLLSRVCCCLGFGLIVSRAQIDGRMVTK 32
           V LLS +C  L FGL VS    DG  + K
Sbjct: 4   VLLLSSLCAALSFGLAVSGVAADGAALYK 32

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>IAA4_PEA (P49679) Auxin-induced protein IAA4|
          Length = 189

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 7/39 (17%)
 Frame = +3

Query: 186 FEETELRLGLPGGGNEAEE-------AVRSSGKRGYAET 281
           F+ TELRLGLPG   E E+        V+++ KR   +T
Sbjct: 3   FKATELRLGLPGITEEEEKKIIHGSSVVKNNNKRQLPQT 41

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>IAA15_ORYSA (Q6AT10) Auxin-responsive protein IAA15 (Indoleacetic acid-induced|
           protein 15)
          Length = 212

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 174 AGLGFEETELRLGLPGGGNEAEEAVRSSGKRGYAE 278
           +GL FE+T L L LPG  + +  +  SS     +E
Sbjct: 16  SGLDFEDTALTLRLPGSSSSSSSSSSSSSSSSPSE 50

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>GCSP_BRUSU (Q8FVU9) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)|
           (Glycine decarboxylase) (Glycine cleavage system
           P-protein)
          Length = 932

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 7/42 (16%)
 Frame = -1

Query: 266 PLAGAPHRLLSLVAAAW-------QAEPQLGLLEPEARHWSP 162
           PLA APH     +A  W       +A    G  +P A++W P
Sbjct: 867 PLANAPHTASDTLATEWKHPYTREEAVFPGGAFDPTAKYWPP 908

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>GCSP_BRUME (P62921) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)|
           (Glycine decarboxylase) (Glycine cleavage system
           P-protein)
          Length = 932

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 7/42 (16%)
 Frame = -1

Query: 266 PLAGAPHRLLSLVAAAW-------QAEPQLGLLEPEARHWSP 162
           PLA APH     +A  W       +A    G  +P A++W P
Sbjct: 867 PLANAPHTASDTLATEWKHPYTREEAVFPGGAFDPTAKYWPP 908

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>GCSP_BRUAB (P62920) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)|
           (Glycine decarboxylase) (Glycine cleavage system
           P-protein)
          Length = 932

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 7/42 (16%)
 Frame = -1

Query: 266 PLAGAPHRLLSLVAAAW-------QAEPQLGLLEPEARHWSP 162
           PLA APH     +A  W       +A    G  +P A++W P
Sbjct: 867 PLANAPHTASDTLATEWKHPYTREEAVFPGGAFDPTAKYWPP 908

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>GCSP_BRUA2 (Q2YKX9) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)|
           (Glycine decarboxylase) (Glycine cleavage system
           P-protein)
          Length = 932

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 7/42 (16%)
 Frame = -1

Query: 266 PLAGAPHRLLSLVAAAW-------QAEPQLGLLEPEARHWSP 162
           PLA APH     +A  W       +A    G  +P A++W P
Sbjct: 867 PLANAPHTASDTLATEWKHPYTREEAVFPGGAFDPTAKYWPP 908

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>VE2_HPV23 (P50769) Regulatory protein E2|
          Length = 431

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +1

Query: 106 KASSQGANKKPKGGCRIGAGDQWRA-SGSRRP 198
           ++SS+GA+K P+ G R G G   R+ S SR P
Sbjct: 279 RSSSRGASKSPRRGGRSGGGPLTRSRSRSRSP 310

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>CLPX_HUMAN (O76031) ATP-dependent Clp protease ATP-binding subunit ClpX-like,|
           mitochondrial precursor
          Length = 633

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 73  LSQTPSSSRHAKASSQGANKKPKGGCRIGAGDQWRASGSRRPSCGSAC 216
           +S+  S   + K++S+G++KK   G     G+Q R      P CG  C
Sbjct: 70  ISKDGSGDGNKKSASEGSSKKSGSGNSGKGGNQLRC-----PKCGDLC 112

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>FILA_HUMAN (P20930) Filaggrin|
          Length = 4061

 Score = 24.3 bits (51), Expect(2) = 9.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 222  GGNEAEEAVRSSGKRGYA 275
            G  +A  AVR SG RGY+
Sbjct: 2023 GHGQASSAVRDSGHRGYS 2040



 Score = 21.2 bits (43), Expect(2) = 9.1
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 76   SQTPSSSRHAKASSQGANKKPKGGCRIGAGDQ 171
            S   S +RH ++SS+G         R  AG++
Sbjct: 1973 SSRQSGTRHTESSSRGQAASSHEQARSSAGER 2004


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,443,867
Number of Sequences: 219361
Number of extensions: 843215
Number of successful extensions: 2991
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 2924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2985
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result