ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast15h10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY103836.1| Zea mays PCO135053 mRNA sequence 92 2e-15
2ref|XM_468970.1| Oryza sativa (japonica cultivar-group), mRNA 88 3e-14
3gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome... 88 3e-14
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 88 3e-14
5gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genom... 88 3e-14
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
7dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
8dbj|AK068213.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 4e-13
9gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 84 4e-13
10emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb... 84 4e-13
11gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 44 0.35
12emb|AL606588.4|OSJN00023 Oryza sativa genomic DNA, chromosome 4,... 44 0.35
13dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
14dbj|AK071065.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.35
15gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.4
16emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.4
17gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.4
18gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.4
19ref|XM_483328.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
20gb|DQ356948.1| Crocodilepox virus, complete genome 40 5.5
21ref|XM_502857.1| Yarrowia lipolytica CLIB122, YALI0D15356g predi... 40 5.5
22emb|AL035689.26|HS187J11 Human DNA sequence from clone RP1-187J1... 40 5.5
23gb|AE005950.1| Caulobacter crescentus CB15 section 276 of 359 of... 40 5.5
24dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103 40 5.5
25dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.5
26gb|AC004821.3| Homo sapiens chromosome 5 clone RP1-98O22, comple... 40 5.5
27ref|XM_939144.1| PREDICTED: Homo sapiens similar to CG1550-PA (L... 40 5.5
28ref|XM_928636.1| PREDICTED: Homo sapiens similar to CG1550-PA (L... 40 5.5
29gb|DQ384280.1| Mastigamoeba balamuthi hydrolase-like protein mRN... 40 5.5
30dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
31gb|AC113403.4| Homo sapiens chromosome 5 clone RP11-461O14, comp... 40 5.5
32dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.5
33dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
34dbj|AK109868.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
35gb|AC007277.2|AC007277 Homo sapiens BAC clone RP11-244E6 from 2,... 40 5.5
36emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 5.5
37dbj|AB097116.1| Brassica rapa SRK-60, SLG-60 genes for S recepto... 40 5.5
38emb|BX005467.6| Mouse DNA sequence from clone RP23-74L11 on chro... 40 5.5
39emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 40 5.5 
>gb|AY103836.1| Zea mays PCO135053 mRNA sequence
          Length = 1519

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Plus

                                                                     
Query: 254 ctccggcaagaggggctacgccgagaccatcgacctcatgctgaagctggagccagcg 311
           ||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||
Sbjct: 291 ctccggcaagaggggcttcgccgagaccatcgacctgaagctgaagctggagccagcg 348
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>ref|XM_468970.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 707

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 56/60 (93%)
 Strand = Plus / Plus

                                                                       
Query: 248 gaggagctccggcaagaggggctacgccgagaccatcgacctcatgctgaagctggagcc 307
           ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| ||||
Sbjct: 74  gaggagctccggcaagaggggcttcgccgagaccatcgacctcaagctcaagctgcagcc 133



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                    
Query: 171 atggcgggcctcgggttcgaggagaccgagctgcggctcggcctgccaggcggcggc 227
           ||||| |||||||||||||| ||||||||||| ||||||||||| || |||| ||||
Sbjct: 6   atggctggcctcgggttcgacgagaccgagctccggctcggccttcccggcgccggc 62
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>gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBb0069P02 map near S13580, complete sequence
          Length = 88044

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 56/60 (93%)
 Strand = Plus / Plus

                                                                        
Query: 248  gaggagctccggcaagaggggctacgccgagaccatcgacctcatgctgaagctggagcc 307
            ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| ||||
Sbjct: 3342 gaggagctccggcaagaggggcttcgccgagaccatcgacctcaagctcaagctgcagcc 3401



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                     
Query: 171  atggcgggcctcgggttcgaggagaccgagctgcggctcggcctgccaggcggcggc 227
            ||||| |||||||||||||| ||||||||||| ||||||||||| || |||| ||||
Sbjct: 3274 atggctggcctcgggttcgacgagaccgagctccggctcggccttcccggcgccggc 3330
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 56/60 (93%)
 Strand = Plus / Minus

                                                                            
Query: 248      gaggagctccggcaagaggggctacgccgagaccatcgacctcatgctgaagctggagcc 307
                ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| ||||
Sbjct: 24088114 gaggagctccggcaagaggggcttcgccgagaccatcgacctcaagctcaagctgcagcc 24088055



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                         
Query: 171      atggcgggcctcgggttcgaggagaccgagctgcggctcggcctgccaggcggcggc 227
                ||||| |||||||||||||| ||||||||||| ||||||||||| || |||| ||||
Sbjct: 24088182 atggctggcctcgggttcgacgagaccgagctccggctcggccttcccggcgccggc 24088126
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>gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genomic sequence, complete
              sequence
          Length = 140980

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 56/60 (93%)
 Strand = Plus / Plus

                                                                          
Query: 248    gaggagctccggcaagaggggctacgccgagaccatcgacctcatgctgaagctggagcc 307
              ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| ||||
Sbjct: 134442 gaggagctccggcaagaggggcttcgccgagaccatcgacctcaagctcaagctgcagcc 134501



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                       
Query: 171    atggcgggcctcgggttcgaggagaccgagctgcggctcggcctgccaggcggcggc 227
              ||||| |||||||||||||| ||||||||||| ||||||||||| || |||| ||||
Sbjct: 134374 atggctggcctcgggttcgacgagaccgagctccggctcggccttcccggcgccggc 134430
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 56/60 (93%)
 Strand = Plus / Minus

                                                                            
Query: 248      gaggagctccggcaagaggggctacgccgagaccatcgacctcatgctgaagctggagcc 307
                ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| ||||
Sbjct: 24005583 gaggagctccggcaagaggggcttcgccgagaccatcgacctcaagctcaagctgcagcc 24005524



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                         
Query: 171      atggcgggcctcgggttcgaggagaccgagctgcggctcggcctgccaggcggcggc 227
                ||||| |||||||||||||| ||||||||||| ||||||||||| || |||| ||||
Sbjct: 24005651 atggctggcctcgggttcgacgagaccgagctccggctcggccttcccggcgccggc 24005595
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 51/54 (94%)
 Strand = Plus / Minus

                                                                      
Query: 254      ctccggcaagaggggctacgccgagaccatcgacctcatgctgaagctggagcc 307
                |||||| |||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 25349403 ctccgggaagaggggcttcgccgagaccatcgacctcaagctgaagctggagcc 25349350



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                          
Query: 186      ttcgaggagaccgagctgcggctcggcctgccaggcggcggc 227
                ||||||| ||||||||| |||||||||||||| |||||||||
Sbjct: 25349483 ttcgaggcgaccgagctccggctcggcctgcccggcggcggc 25349442
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>dbj|AK068213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149K13, full
           insert sequence
          Length = 1545

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 51/54 (94%)
 Strand = Plus / Plus

                                                                 
Query: 254 ctccggcaagaggggctacgccgagaccatcgacctcatgctgaagctggagcc 307
           |||||| |||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 351 ctccgggaagaggggcttcgccgagaccatcgacctcaagctgaagctggagcc 404



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 186 ttcgaggagaccgagctgcggctcggcctgccaggcggcggc 227
           ||||||| ||||||||| |||||||||||||| |||||||||
Sbjct: 271 ttcgaggcgaccgagctccggctcggcctgcccggcggcggc 312
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 51/54 (94%)
 Strand = Plus / Minus

                                                                      
Query: 254      ctccggcaagaggggctacgccgagaccatcgacctcatgctgaagctggagcc 307
                |||||| |||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 25277579 ctccgggaagaggggcttcgccgagaccatcgacctcaagctgaagctggagcc 25277526



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                          
Query: 186      ttcgaggagaccgagctgcggctcggcctgccaggcggcggc 227
                ||||||| ||||||||| |||||||||||||| |||||||||
Sbjct: 25277659 ttcgaggcgaccgagctccggctcggcctgcccggcggcggc 25277618
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>emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb0062H20 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152914

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 51/54 (94%)
 Strand = Plus / Minus

                                                                   
Query: 254   ctccggcaagaggggctacgccgagaccatcgacctcatgctgaagctggagcc 307
             |||||| |||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 16213 ctccgggaagaggggcttcgccgagaccatcgacctcaagctgaagctggagcc 16160



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                       
Query: 186   ttcgaggagaccgagctgcggctcggcctgccaggcggcggc 227
             ||||||| ||||||||| |||||||||||||| |||||||||
Sbjct: 16293 ttcgaggcgaccgagctccggctcggcctgcccggcggcggc 16252
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 313     cggcggccgcgccgccgtccga 334
               ||||||||||||||||||||||
Sbjct: 1889967 cggcggccgcgccgccgtccga 1889988
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>emb|AL606588.4|OSJN00023 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016O02,
              complete sequence
          Length = 167988

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 309    gcgtcggcggccgcgccgccgt 330
              ||||||||||||||||||||||
Sbjct: 156170 gcgtcggcggccgcgccgccgt 156149
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 309      gcgtcggcggccgcgccgccgt 330
                ||||||||||||||||||||||
Sbjct: 23438849 gcgtcggcggccgcgccgccgt 23438828
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>dbj|AK071065.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080M03, full
           insert sequence
          Length = 1779

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 309 gcgtcggcggccgcgccgccgt 330
           ||||||||||||||||||||||
Sbjct: 164 gcgtcggcggccgcgccgccgt 143
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 313     cggcggccgcgccgccgtccg 333
               |||||||||||||||||||||
Sbjct: 2441561 cggcggccgcgccgccgtccg 2441541
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 313    cggcggccgcgccgccgtccg 333
              |||||||||||||||||||||
Sbjct: 621548 cggcggccgcgccgccgtccg 621528
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 351     gccgacggtgccgcggaggcgcagc 375
               ||||||||||||||| |||||||||
Sbjct: 4050208 gccgacggtgccgcgcaggcgcagc 4050184



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 194     gaccgagctgcggctcggcctgcc 217
               ||||||||| ||||||||||||||
Sbjct: 3396216 gaccgagctacggctcggcctgcc 3396193
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 309     gcgtcggcggccgcgccgccg 329
               |||||||||||||||||||||
Sbjct: 2210252 gcgtcggcggccgcgccgccg 2210272
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>ref|XM_483328.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2369

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 310 cgtcggcggccgcgccgccg 329
           ||||||||||||||||||||
Sbjct: 487 cgtcggcggccgcgccgccg 506
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>gb|DQ356948.1| Crocodilepox virus, complete genome
          Length = 190054

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 310   cgtcggcggccgcgccgccg 329
             ||||||||||||||||||||
Sbjct: 78929 cgtcggcggccgcgccgccg 78948
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>ref|XM_502857.1| Yarrowia lipolytica CLIB122, YALI0D15356g predicted mRNA
          Length = 3297

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   aaaccccaagcagcagcaga 99
            ||||||||||||||||||||
Sbjct: 2562 aaaccccaagcagcagcaga 2581
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>emb|AL035689.26|HS187J11 Human DNA sequence from clone RP1-187J11 on chromosome 6q11.1-22.33
              Contains the 3' part of the gene for endoplasmic reticulum
              associated protein 140 kDa (ERAP140) (similar to nucleolar
              protein C7B), the gene for a novel protein similar to
              protein kinase C inhibitors, the gene for MDS024 protein
              and two putative CpG islands, complete sequence
          Length = 144364

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     agccatactcttttgtaacc 41
              ||||||||||||||||||||
Sbjct: 125954 agccatactcttttgtaacc 125935
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>gb|AE005950.1| Caulobacter crescentus CB15 section 276 of 359 of the complete genome
          Length = 12754

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 309  gcgtcggcggccgcgccgcc 328
            ||||||||||||||||||||
Sbjct: 1549 gcgtcggcggccgcgccgcc 1568
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>dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103
          Length = 1282697

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 197    cgagctgcggctcggcctgc 216
              ||||||||||||||||||||
Sbjct: 139424 cgagctgcggctcggcctgc 139443
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 307     cagcgtcggcggccgcgccg 326
               ||||||||||||||||||||
Sbjct: 2291197 cagcgtcggcggccgcgccg 2291216
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>gb|AC004821.3| Homo sapiens chromosome 5 clone RP1-98O22, complete sequence
          Length = 163332

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 280   ccatcgacctcatgctgaag 299
             ||||||||||||||||||||
Sbjct: 27089 ccatcgacctcatgctgaag 27108
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>ref|XM_939144.1| PREDICTED: Homo sapiens similar to CG1550-PA (LOC650058), mRNA
          Length = 198

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 280 ccatcgacctcatgctgaag 299
           ||||||||||||||||||||
Sbjct: 8   ccatcgacctcatgctgaag 27
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>ref|XM_928636.1| PREDICTED: Homo sapiens similar to CG1550-PA (LOC645623), mRNA
          Length = 198

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 280 ccatcgacctcatgctgaag 299
           ||||||||||||||||||||
Sbjct: 8   ccatcgacctcatgctgaag 27
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>gb|DQ384280.1| Mastigamoeba balamuthi hydrolase-like protein mRNA, partial cds
          Length = 420

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 217 caggcggcggcaacgaggctgagg 240
           ||||||||||| ||||||||||||
Sbjct: 335 caggcggcggcgacgaggctgagg 312
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 310      cgtcggcggccgcgccgccg 329
                ||||||||||||||||||||
Sbjct: 25491476 cgtcggcggccgcgccgccg 25491495
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>gb|AC113403.4| Homo sapiens chromosome 5 clone RP11-461O14, complete sequence
          Length = 167159

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 280   ccatcgacctcatgctgaag 299
             ||||||||||||||||||||
Sbjct: 84213 ccatcgacctcatgctgaag 84194
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 310     cgtcggcggccgcgccgccg 329
               ||||||||||||||||||||
Sbjct: 2052168 cgtcggcggccgcgccgccg 2052187
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>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0711H09
          Length = 185858

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 310    cgtcggcggccgcgccgccg 329
              ||||||||||||||||||||
Sbjct: 122792 cgtcggcggccgcgccgccg 122811
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>dbj|AK109868.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-A07, full
           insert sequence
          Length = 2369

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 310 cgtcggcggccgcgccgccg 329
           ||||||||||||||||||||
Sbjct: 487 cgtcggcggccgcgccgccg 506
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>gb|AC007277.2|AC007277 Homo sapiens BAC clone RP11-244E6 from 2, complete sequence
          Length = 180221

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tgtaaccatcctcccgtcta 54
             ||||||||||||||||||||
Sbjct: 39590 tgtaaccatcctcccgtcta 39571
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 198     gagctgcggctcggcctgcc 217
               ||||||||||||||||||||
Sbjct: 2848287 gagctgcggctcggcctgcc 2848268
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>dbj|AB097116.1| Brassica rapa SRK-60, SLG-60 genes for S receptor kinase, S-locus
             glycoprotein, partial cds
          Length = 86379

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    atactcttttgtaaccatcc 45
             ||||||||||||||||||||
Sbjct: 41016 atactcttttgtaaccatcc 40997
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>emb|BX005467.6| Mouse DNA sequence from clone RP23-74L11 on chromosome X, complete
              sequence
          Length = 233590

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 286    acctcatgctgaagctggag 305
              ||||||||||||||||||||
Sbjct: 155549 acctcatgctgaagctggag 155530
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 80      aaaccccaagcagcagcaga 99
               ||||||||||||||||||||
Sbjct: 1879111 aaaccccaagcagcagcaga 1879130


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,287,373
Number of Sequences: 3902068
Number of extensions: 3287373
Number of successful extensions: 72303
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70788
Number of HSP's gapped (non-prelim): 1515
length of query: 410
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 388
effective length of database: 17,147,199,772
effective search space: 6653113511536
effective search space used: 6653113511536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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