ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast15e09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ATS9_HUMAN (Q9P2N4) ADAMTS-9 precursor (EC 3.4.24.-) (A disinteg... 28 4.7
2ZAN_MOUSE (O88799) Zonadhesin precursor 28 8.1

>ATS9_HUMAN (Q9P2N4) ADAMTS-9 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 9) (ADAM-TS
            9) (ADAM-TS9)
          Length = 1935

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 201  GRSAWTTAAWGASPCPCGGGAMR 133
            G + W T  WGA    C GG+ R
Sbjct: 1328 GGNQWRTGPWGACSSTCAGGSQR 1350



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>ZAN_MOUSE (O88799) Zonadhesin precursor|
          Length = 5376

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +2

Query: 32   TYIALQC-THARFASLLPSLLPLC 100
            T I LQC  H ++ S LPS LP C
Sbjct: 3411 TKITLQCPAHTQYTSCLPSCLPSC 3434



 Score = 27.7 bits (60), Expect = 8.1
 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +2

Query: 32   TYIALQC-THARFASLLPSLLPLC 100
            T I LQC  H+R+ + LPS  PLC
Sbjct: 3174 TNIPLQCPAHSRYTNCLPSCPPLC 3197


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,758,802
Number of Sequences: 219361
Number of extensions: 310635
Number of successful extensions: 1209
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 80,573,946
effective HSP length: 62
effective length of database: 66,973,564
effective search space used: 1607365536
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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