ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast15e06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Y14203.1|HVY14203 Hordeum vulgare mRNA for oxalate oxidase (HvOxOa) Length = 970 Score = 735 bits (371), Expect = 0.0 Identities = 371/371 (100%) Strand = Plus / Plus Query: 10 agcttagcagcaaccaccagtagtgcctcaaaggctcctgatcaacaaactctagctcat 69 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcttagcagcaaccaccagtagtgcctcaaaggctcctgatcaacaaactctagctcat 60 Query: 70 cagtggtagctaagcttgctacatagcaagcaatgggttactctaaaaacctaggggctg 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cagtggtagctaagcttgctacatagcaagcaatgggttactctaaaaacctaggggctg 120 Query: 130 gcctgttcaccatgctgctccttgctccggccatcatggctaccgaccctgaccctctac 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcctgttcaccatgctgctccttgctccggccatcatggctaccgaccctgaccctctac 180 Query: 190 aggacttctgcgtcgcggacctcgatggcaaggcggtctcggtgaacgggcatacgtgta 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aggacttctgcgtcgcggacctcgatggcaaggcggtctcggtgaacgggcatacgtgta 240 Query: 250 agcccatgtcggaggccggcgacgacttcctcttctcgtccaagctgaccaaggccggca 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 agcccatgtcggaggccggcgacgacttcctcttctcgtccaagctgaccaaggccggca 300 Query: 310 acacgtccaccccgaacggctcggccgtgacggagctcgacgtggccgagtggcccggta 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acacgtccaccccgaacggctcggccgtgacggagctcgacgtggccgagtggcccggta 360 Query: 370 cgaacacgctg 380 ||||||||||| Sbjct: 361 cgaacacgctg 371
>emb|Y09915.1|TAPSBGER1 T.aestivum mRNA for germin-like protein 1 Length = 856 Score = 464 bits (234), Expect = e-127 Identities = 335/368 (91%), Gaps = 3/368 (0%) Strand = Plus / Plus Query: 13 ttagcagcaaccaccagtagtgcctcaaaggctcctgatcaacaaactctagctcatcag 72 |||||||||||||||||| ||||||||| ||| ||||||||||||||||||| | ||| Sbjct: 1 ttagcagcaaccaccagt---gcctcaaagactcttgatcaacaaactctagctgaccag 57 Query: 73 tggtagctaagcttgctacatagcaagcaatgggttactctaaaaacctaggggctggcc 132 || |||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| Sbjct: 58 tgctagctaagcttgctgcatagcaagcaatggggtactctaaaaacctagcggctggcc 117 Query: 133 tgttcaccatgctgctccttgctccggccatcatggctaccgaccctgaccctctacagg 192 ||||| |||||||| |||| ||||||||| || |||| ||||||| || ||||| |||| Sbjct: 118 tgttcgccatgctgttcctagctccggccgtcctggcatccgaccccgatcctcttcagg 177 Query: 193 acttctgcgtcgcggacctcgatggcaaggcggtctcggtgaacgggcatacgtgtaagc 252 ||||||| || || ||||||||||||| ||| |||||||||||||||||| | || |||| Sbjct: 178 acttctgtgttgccgacctcgatggcagggcagtctcggtgaacgggcatccatgcaagc 237 Query: 253 ccatgtcggaggccggcgacgacttcctcttctcgtccaagctgaccaaggccggcaaca 312 ||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 238 ccatgtcggaggctggtgacgacttcctcttctcgtccaagctggccaaggccggcaaca 297 Query: 313 cgtccaccccgaacggctcggccgtgacggagctcgacgtggccgagtggcccggtacga 372 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 298 cgtccaccccgaatggctcggccgtgacggagctcgacgtggccgagtggcccggtacga 357 Query: 373 acacgctg 380 |||||||| Sbjct: 358 acacgctg 365
>emb|Y09917.1|TAPSBGER3 T.aestivum mRNA for germin-like protein 3 Length = 1027 Score = 440 bits (222), Expect = e-120 Identities = 303/330 (91%) Strand = Plus / Plus Query: 48 tgatcaacaaactctagctcatcagtggtagctaagcttgctacatagcaagcaatgggt 107 ||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||| Sbjct: 6 tgatcaacaaactctagctgatcagtgctagctaagcttgctacatagcaagccatgggt 65 Query: 108 tactctaaaaacctaggggctggcctgttcaccatgctgctccttgctccggccatcatg 167 ||||| ||||||||||||||||||||||| |||||||||||||||||||| | || || Sbjct: 66 tactccaaaaacctaggggctggcctgtttggcatgctgctccttgctccgggcgtcctg 125 Query: 168 gctaccgaccctgaccctctacaggacttctgcgtcgcggacctcgatggcaaggcggtc 227 || |||||||||||||||| |||||||||||||| || |||||||| |||||||||||| Sbjct: 126 gcctccgaccctgaccctctccaggacttctgcgttgctgacctcgacggcaaggcggtc 185 Query: 228 tcggtgaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcg 287 || |||||||||||| | || ||||| |||||||||||||| |||||||||||||||||| Sbjct: 186 tctgtgaacgggcatccatgcaagcctatgtcggaggccggtgacgacttcctcttctcg 245 Query: 288 tccaagctgaccaaggccggcaacacgtccaccccgaacggctcggccgtgacggagctc 347 ||||||||| ||||||| |||||||||||||||||||| ||||| || |||||||||||| Sbjct: 246 tccaagctggccaaggctggcaacacgtccaccccgaatggctctgctgtgacggagctc 305 Query: 348 gacgtggccgagtggcccggtacgaacacg 377 |||||||||||||||||||||||||||||| Sbjct: 306 gacgtggccgagtggcccggtacgaacacg 335
>gb|M21962.1|WHTGAMINA Triticum aestivum germin protein precursor, mRNA, complete cds Length = 1012 Score = 402 bits (203), Expect = e-109 Identities = 300/331 (90%), Gaps = 1/331 (0%) Strand = Plus / Plus Query: 50 atcaacaaactctagctcatcagtggtagctaagcttgctacatagcaagcaatgggtta 109 ||||||||||||||||| |||| | ||||||||||| ||||||||||||| |||| || Sbjct: 35 atcaacaaactctagctgatcaatcctagctaagcttattacatagcaagca-tggggta 93 Query: 110 ctctaaaaacctaggggctggcctgttcaccatgctgctccttgctccggccatcatggc 169 ||| |||| ||||| |||||||||||| | |||||| | || ||||||||| || |||| Sbjct: 94 ctccaaaaccctagtagctggcctgttcgcaatgctgttactagctccggccgtcttggc 153 Query: 170 taccgaccctgaccctctacaggacttctgcgtcgcggacctcgatggcaaggcggtctc 229 |||||||| |||||||| ||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 154 caccgacccagaccctctccaggacttctgtgtcgccgacctcgacggcaaggcggtctc 213 Query: 230 ggtgaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcgtc 289 |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 ggtgaacgggcacacgtgcaagcccatgtcggaggccggcgacgacttcctcttctcgtc 273 Query: 290 caagctgaccaaggccggcaacacgtccaccccgaacggctcggccgtgacggagctcga 349 |||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 274 caagttggccaaggccggcaacacgtccaccccgaacggctccgccgtgacggagctcga 333 Query: 350 cgtggccgagtggcccggtacgaacacgctg 380 ||||||||||||||||||||| ||||||||| Sbjct: 334 cgtggccgagtggcccggtaccaacacgctg 364
>gb|M63223.1|WHTGERMIN Wheat germin 9f-2.8 gene, complete cds Length = 2822 Score = 402 bits (203), Expect = e-109 Identities = 300/331 (90%), Gaps = 1/331 (0%) Strand = Plus / Plus Query: 50 atcaacaaactctagctcatcagtggtagctaagcttgctacatagcaagcaatgggtta 109 ||||||||||||||||| |||| | ||||||||||| ||||||||||||| |||| || Sbjct: 1748 atcaacaaactctagctgatcaatcctagctaagcttattacatagcaagca-tggggta 1806 Query: 110 ctctaaaaacctaggggctggcctgttcaccatgctgctccttgctccggccatcatggc 169 ||| |||| ||||| |||||||||||| | |||||| | || ||||||||| || |||| Sbjct: 1807 ctccaaaaccctagtagctggcctgttcgcaatgctgttactagctccggccgtcttggc 1866 Query: 170 taccgaccctgaccctctacaggacttctgcgtcgcggacctcgatggcaaggcggtctc 229 |||||||| |||||||| ||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 1867 caccgacccagaccctctccaggacttctgtgtcgccgacctcgacggcaaggcggtctc 1926 Query: 230 ggtgaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcgtc 289 |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1927 ggtgaacgggcacacgtgcaagcccatgtcggaggccggcgacgacttcctcttctcgtc 1986 Query: 290 caagctgaccaaggccggcaacacgtccaccccgaacggctcggccgtgacggagctcga 349 |||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1987 caagttggccaaggccggcaacacgtccaccccgaacggctccgccgtgacggagctcga 2046 Query: 350 cgtggccgagtggcccggtacgaacacgctg 380 ||||||||||||||||||||| ||||||||| Sbjct: 2047 cgtggccgagtggcccggtaccaacacgctg 2077
>gb|L15737.1|BLYGERMIN Barley germin mRNA, partial cds Length = 603 Score = 391 bits (197), Expect = e-105 Identities = 206/209 (98%) Strand = Plus / Plus Query: 172 ccgaccctgaccctctacaggacttctgcgtcgcggacctcgatggcaaggcggtctcgg 231 ||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 ccgacccagacccactccaggacttctgcgtcgcggacctcgatggcaaggcggtctcgg 61 Query: 232 tgaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcgtcca 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 tgaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcgtcca 121 Query: 292 agctgaccaaggccggcaacacgtccaccccgaacggctcggccgtgacggagctcgacg 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 agctgaccaaggccggcaacacgtccaccccgaacggctcggccgtgacggagctcgacg 181 Query: 352 tggccgagtggcccggtacgaacacgctg 380 ||||||||||||||||||||||||||||| Sbjct: 182 tggccgagtggcccggtacgaacacgctg 210
>gb|U01963.1|HVU01963 Hordeum vulgare CM 72 germin subunit mRNA, complete cds Length = 1006 Score = 343 bits (173), Expect = 3e-91 Identities = 272/305 (89%) Strand = Plus / Plus Query: 76 tagctaagcttgctacatagcaagcaatgggttactctaaaaacctaggggctggcctgt 135 |||||||||||| | |||||||||||||||| ||||| |||| ||||| || | |||||| Sbjct: 67 tagctaagcttgttgcatagcaagcaatggggtactccaaaaccctagcggttagcctgt 126 Query: 136 tcaccatgctgctccttgctccggccatcatggctaccgaccctgaccctctacaggact 195 || || ||||||||||||| |||||| || |||| |||||||||||||||| ||||||| Sbjct: 127 tcgccgtgctgctccttgcaccggccgtcctggcatccgaccctgaccctctccaggact 186 Query: 196 tctgcgtcgcggacctcgatggcaaggcggtctcggtgaacgggcatacgtgtaagccca 255 |||| ||||| ||||| || ||||| |||||||| ||||| || ||| |||| ||||||| Sbjct: 187 tctgtgtcgccgaccttgacggcaaagcggtctcagtgaatggtcatccgtgcaagccca 246 Query: 256 tgtcggaggccggcgacgacttcctcttctcgtccaagctgaccaaggccggcaacacgt 315 |||||||||||||||| |||||||| |||||||| |||||| |||||||||||||||||| Sbjct: 247 tgtcggaggccggcgatgacttccttttctcgtcaaagctggccaaggccggcaacacgt 306 Query: 316 ccaccccgaacggctcggccgtgacggagctcgacgtggccgagtggcccggtacgaaca 375 | ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 307 ctacccccaacggctcggccgtgacggagctcgacgtggctgagtggcccggtacgaaca 366 Query: 376 cgctg 380 ||||| Sbjct: 367 cgctg 371
>gb|M63224.1|WHTGERMINA Wheat germin 9f-3.8 gene, complete cds Length = 3761 Score = 327 bits (165), Expect = 2e-86 Identities = 267/301 (88%) Strand = Plus / Plus Query: 76 tagctaagcttgctacatagcaagcaatgggttactctaaaaacctaggggctggcctgt 135 ||||||||| |||| |||||||||||||||| |||||||||||| ||| | | ||| ||| Sbjct: 1292 tagctaagcgtgctgcatagcaagcaatggggtactctaaaaacatagcgtccggcatgt 1351 Query: 136 tcaccatgctgctccttgctccggccatcatggctaccgaccctgaccctctacaggact 195 | ||||||||||||||||| | ||| || || | || ||||| ||||||| ||||||| Sbjct: 1352 ttgccatgctgctccttgcttcagccgtcctgtcctccaaccctcaccctctccaggact 1411 Query: 196 tctgcgtcgcggacctcgatggcaaggcggtctcggtgaacgggcatacgtgtaagccca 255 |||| ||||| ||||||||||||||||||||||||||||||||||| | ||| ||||||| Sbjct: 1412 tctgtgtcgccgacctcgatggcaaggcggtctcggtgaacgggcacatgtgcaagccca 1471 Query: 256 tgtcggaggccggcgacgacttcctcttctcgtccaagctgaccaaggccggcaacacgt 315 ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| | Sbjct: 1472 tgtcggaggccggcgacgacttcctcttctcttccaagcttgccaaggccggcaacacat 1531 Query: 316 ccaccccgaacggctcggccgtgacggagctcgacgtggccgagtggcccggtacgaaca 375 |||||||||||||||| || |||||||| ||| |||||||||||||||| |||||||||| Sbjct: 1532 ccaccccgaacggctccgctgtgacggatctcaacgtggccgagtggcctggtacgaaca 1591 Query: 376 c 376 | Sbjct: 1592 c 1592 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 1 atccaccacagcttagcagcaaccacca 28 |||||||| |||| |||||||||||||| Sbjct: 1221 atccaccatagctcagcagcaaccacca 1248
>emb|AJ556991.1|TAE556991 Triticum aestivum mRNA for oxalate oxidase precursor (OXO1 gene) Length = 675 Score = 325 bits (164), Expect = 6e-86 Identities = 248/276 (89%) Strand = Plus / Plus Query: 102 atgggttactctaaaaacctaggggctggcctgttcaccatgctgctccttgctccggcc 161 ||||| ||||| |||| ||||| ||||||||||| ||| ||||||||| ||||| | | Sbjct: 1 atggggtactccaaaaccctagtagctggcctgtttgccacgctgctcctagctccagtc 60 Query: 162 atcatggctaccgaccctgaccctctacaggacttctgcgtcgcggacctcgatggcaag 221 || |||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||| Sbjct: 61 gtcctggctaccgaccctgaccctctccaggacttctgtgtcgccgacctcgacggcaag 120 Query: 222 gcggtctcggtgaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctc 281 ||||||||||||||||||||| |||| |||||||||||| |||||||||| ||||||||| Sbjct: 121 gcggtctcggtgaacgggcatccgtgcaagcccatgtcgaaggccggcgatgacttcctc 180 Query: 282 ttctcgtccaagctgaccaaggccggcaacacgtccaccccgaacggctcggccgtgacg 341 ||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 181 ttctcgtccaagctggccaaggctggcaacacgtcgaccccgaacggctcggccgtgacg 240 Query: 342 gagctcgacgtggccgagtggcccggtacgaacacg 377 ||||| |||||||| |||||||| || ||||||||| Sbjct: 241 gagcttgacgtggctgagtggcctggaacgaacacg 276
>gb|AY864922.1| Triticum aestivum strain Yumai 18 germin-like protein 3 gene, promoter region, 5' UTR and partial cds Length = 1853 Score = 220 bits (111), Expect = 3e-54 Identities = 144/155 (92%) Strand = Plus / Plus Query: 48 tgatcaacaaactctagctcatcagtggtagctaagcttgctacatagcaagcaatgggt 107 ||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||| Sbjct: 1695 tgatcaacaaactctagctgatcagtgctagctaagcttgctacatagcaagccatgggt 1754 Query: 108 tactctaaaaacctaggggctggcctgttcaccatgctgctccttgctccggccatcatg 167 ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| || || Sbjct: 1755 tactccaaaaacctaggggctggcctgtttgccatgctgctccttgctccggccgtcctg 1814 Query: 168 gctaccgaccctgaccctctacaggacttctgcgt 202 || |||||||||||||||| |||||||||||||| Sbjct: 1815 gcctccgaccctgaccctctccaggacttctgcgt 1849 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1 atccaccacagcttagcagcaaccaccagt 30 ||||||||||||||||| |||||||||||| Sbjct: 1655 atccaccacagcttagctgcaaccaccagt 1684
>emb|AJ291825.1|LPE291825 Lolium perenne mRNA for oxalate oxidase (oxO1 gene) Length = 934 Score = 202 bits (102), Expect = 6e-49 Identities = 225/266 (84%) Strand = Plus / Plus Query: 114 aaaaacctaggggctggcctgttcaccatgctgctccttgctccggccatcatggctacc 173 |||| ||||| ||||||||| ||| || |||| |||||||||| |||||||| ||| Sbjct: 115 aaaaccctagcggctggcctcttcgccttgctattccttgctccatttatcatggccacc 174 Query: 174 gaccctgaccctctacaggacttctgcgtcgcggacctcgatggcaaggcggtctcggtg 233 || || ||||| || ||||| || ||||| || ||||| |||||||||| ||| || ||| Sbjct: 175 gatccggacccacttcaggatttttgcgtggctgaccttgatggcaaggaggtgtccgtg 234 Query: 234 aacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcgtccaag 293 |||||||| | || ||||||||||| ||||||||||| |||||||||||||| |||||| Sbjct: 235 aacgggcacccatgcaagcccatgtcagaggccggcgatgacttcctcttctcctccaag 294 Query: 294 ctgaccaaggccggcaacacgtccaccccgaacggctcggccgtgacggagctcgacgtg 353 || | |||||||||||||| || ||||||||||||||||||||||| ||||| || ||| Sbjct: 295 ctcgctaaggccggcaacacctctaccccgaacggctcggccgtgacagagctggatgtg 354 Query: 354 gccgagtggcccggtacgaacacgct 379 || |||||||||||||| |||||||| Sbjct: 355 gcagagtggcccggtaccaacacgct 380
>emb|AJ492380.1|LPE492380 Lolium perenne mRNA for oxalate oxidase 2 (oxO2 gene) Length = 867 Score = 194 bits (98), Expect = 1e-46 Identities = 206/242 (85%) Strand = Plus / Plus Query: 135 ttcaccatgctgctccttgctccggccatcatggctaccgaccctgaccctctacaggac 194 |||||||||||| |||||||||| | ||| |||| ||||||||||| || || |||||| Sbjct: 31 ttcaccatgctgttccttgctccatcaatcctggccaccgaccctgatcccctgcaggac 90 Query: 195 ttctgcgtcgcggacctcgatggcaaggcggtctcggtgaacgggcatacgtgtaagccc 254 ||||||||||| ||||| ||||| |||||| |||| ||||||||||| | || |||||| Sbjct: 91 ttctgcgtcgccgacctggatggaaaggcgatctcagtgaacgggcacgcatgcaagccc 150 Query: 255 atgtcggaggccggcgacgacttcctcttctcgtccaagctgaccaaggccggcaacacg 314 ||||| ||||| ||||| |||||||||||||| ||||||||| | | ||||||||||||| Sbjct: 151 atgtccgaggcaggcgaagacttcctcttctcatccaagctggcaatggccggcaacacg 210 Query: 315 tccaccccgaacggctcggccgtgacggagctcgacgtggccgagtggcccggtacgaac 374 ||||| |||||||| || |||||||| ||||| || || || || |||||||| || ||| Sbjct: 211 tccacgccgaacggatcagccgtgacagagcttgatgtagcagaatggcccggcaccaac 270 Query: 375 ac 376 || Sbjct: 271 ac 272
>emb|AJ504848.1|LPE504848 Lolium perenne mRNA for oxalate oxidase (oxo3 gene) Length = 868 Score = 190 bits (96), Expect = 2e-45 Identities = 210/248 (84%) Strand = Plus / Plus Query: 133 tgttcaccatgctgctccttgctccggccatcatggctaccgaccctgaccctctacagg 192 ||||||||||| ||||||||||||| ||||| |||| ||||||||||| ||| | |||| Sbjct: 29 tgttcaccatgttgctccttgctccatccatcctggccaccgaccctgatcctttgcagg 88 Query: 193 acttctgcgtcgcggacctcgatggcaaggcggtctcggtgaacgggcatacgtgtaagc 252 |||||||||| || |||||| | ||||||||| |||| ||||||||||| | || |||| Sbjct: 89 acttctgcgttgctgacctcaacggcaaggcgatctcagtgaacgggcacccttgcaagc 148 Query: 253 ccatgtcggaggccggcgacgacttcctcttctcgtccaagctgaccaaggccggcaaca 312 ||||||||||||| ||||| |||||||||||||| ||||||||| | | ||| ||||||| Sbjct: 149 ccatgtcggaggcaggcgatgacttcctcttctcatccaagctggcaatggctggcaaca 208 Query: 313 cgtccaccccgaacggctcggccgtgacggagctcgacgtggccgagtggcccggtacga 372 |||| || ||||| || |||||||| || ||||| || || || |||||||||| || | Sbjct: 209 cgtcgacaccgaatggatcggccgtcacagagctagatgttgcacagtggcccggcacca 268 Query: 373 acacgctg 380 |||||||| Sbjct: 269 acacgctg 276
>emb|AJ492381.1|LPE492381 Lolium perenne mRNA for oxalate oxidase 4 (oxO4 gene) Length = 828 Score = 190 bits (96), Expect = 2e-45 Identities = 183/212 (86%) Strand = Plus / Plus Query: 135 ttcaccatgctgctccttgctccggccatcatggctaccgaccctgaccctctacaggac 194 |||||||||||| |||||||||| | ||| |||| ||||||||||| || || |||||| Sbjct: 31 ttcaccatgctgttccttgctccatcaatcctggccaccgaccctgatcccctgcaggac 90 Query: 195 ttctgcgtcgcggacctcgatggcaaggcggtctcggtgaacgggcatacgtgtaagccc 254 ||||||||||| ||||| ||||| |||||| |||| ||||||||||| || || |||||| Sbjct: 91 ttctgcgtcgccgacctggatggaaaggcgatctcagtgaacgggcacacatgcaagccc 150 Query: 255 atgtcggaggccggcgacgacttcctcttctcgtccaagctgaccaaggccggcaacacg 314 ||||| ||||| ||||| |||||||||||||| ||||||||| | | ||||||||||||| Sbjct: 151 atgtccgaggcaggcgaagacttcctcttctcatccaagctggcaatggccggcaacacg 210 Query: 315 tccaccccgaacggctcggccgtgacggagct 346 | ||| |||||||| || |||||||| ||||| Sbjct: 211 ttcacgccgaacggatcagccgtgacagagct 242
>emb|Y09916.1|TAPSBGER2 T.aestivum mRNA for germin-like protein 2, partial Length = 764 Score = 157 bits (79), Expect = 3e-35 Identities = 100/107 (93%) Strand = Plus / Plus Query: 271 acgacttcctcttctcgtccaagctgaccaaggccggcaacacgtccaccccgaacggct 330 |||||||||||||||| ||||||||| ||||||| ||||||||||| ||||| ||||||| Sbjct: 1 acgacttcctcttctcatccaagctggccaaggctggcaacacgtcgaccccaaacggct 60 Query: 331 cggccgtgacggagctcgacgtggccgagtggcccggtacgaacacg 377 || |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 61 cgaccgtgacggagctcgacgtggccgagtggcccggaacgaacacg 107
>ref|XM_469352.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 91.7 bits (46), Expect = 2e-15 Identities = 164/201 (81%), Gaps = 8/201 (3%) Strand = Plus / Plus Query: 171 accgaccctgaccctctacaggacttctgcgtcgcggacctcgatggcaaggcggtctcg 230 |||||| | |||||||| ||||||||||||||||| |||||||| |||| |||| || Sbjct: 221 accgacgcggaccctctccaggacttctgcgtcgccgacctcgacagcaa---ggtcacg 277 Query: 231 gtgaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcgtcc 290 ||||||||||| |||| ||||| ||||| ||||||||||| ||||||||||| ||| Sbjct: 278 gtgaacgggcacgcgtgcaagccggcgtcggccgccggcgacgagttcctcttctcctcc 337 Query: 291 aagctgaccaaggccggcaac----acgtccaccccgaacggctcggccgtgacggagct 346 ||| | ||| || |||| || ||| ||| |||||||||||| ||| |||||||| Sbjct: 338 aagattgccacgggcggcgacgtgaacg-ccaacccgaacggctccaacgtcacggagct 396 Query: 347 cgacgtggccgagtggcccgg 367 |||||| |||||||||||||| Sbjct: 397 cgacgtcgccgagtggcccgg 417
>ref|XM_469350.1| Oryza sativa (japonica cultivar-group), mRNA Length = 690 Score = 91.7 bits (46), Expect = 2e-15 Identities = 164/201 (81%), Gaps = 8/201 (3%) Strand = Plus / Plus Query: 171 accgaccctgaccctctacaggacttctgcgtcgcggacctcgatggcaaggcggtctcg 230 |||||| | |||||||| ||||||||||||||||| |||||||| |||| |||| || Sbjct: 85 accgacgcggaccctctccaggacttctgcgtcgccgacctcgacagcaa---ggtcacg 141 Query: 231 gtgaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcgtcc 290 ||||||||||| |||| ||||| |||| |||||||||||| |||||||||||||| Sbjct: 142 gtgaacgggcacgcgtgcaagccggcctcggcggccggcgacgagttcctcttctcgtct 201 Query: 291 aagctgaccaaggccggcaac----acgtccaccccgaacggctcggccgtgacggagct 346 ||| | ||| || |||| || ||| ||| |||||||||||| ||| |||||||| Sbjct: 202 aagatagccacgggcggcgacgtgaacg-ccaacccgaacggctccaacgtcacggagct 260 Query: 347 cgacgtggccgagtggcccgg 367 |||||| |||||||||||||| Sbjct: 261 cgacgtcgccgagtggcccgg 281
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 91.7 bits (46), Expect = 2e-15 Identities = 164/201 (81%), Gaps = 8/201 (3%) Strand = Plus / Minus Query: 171 accgaccctgaccctctacaggacttctgcgtcgcggacctcgatggcaaggcggtctcg 230 |||||| | |||||||| ||||||||||||||||| |||||||| |||| |||| || Sbjct: 27500457 accgacgcggaccctctccaggacttctgcgtcgccgacctcgacagcaa---ggtcacg 27500401 Query: 231 gtgaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcgtcc 290 ||||||||||| |||| ||||| ||||| ||||||||||| ||||||||||| ||| Sbjct: 27500400 gtgaacgggcacgcgtgcaagccggcgtcggccgccggcgacgagttcctcttctcctcc 27500341 Query: 291 aagctgaccaaggccggcaac----acgtccaccccgaacggctcggccgtgacggagct 346 ||| | ||| || |||| || ||| ||| |||||||||||| ||| |||||||| Sbjct: 27500340 aagattgccacgggcggcgacgtgaacg-ccaacccgaacggctccaacgtcacggagct 27500282 Query: 347 cgacgtggccgagtggcccgg 367 |||||| |||||||||||||| Sbjct: 27500281 cgacgtcgccgagtggcccgg 27500261 Score = 91.7 bits (46), Expect = 2e-15 Identities = 164/201 (81%), Gaps = 8/201 (3%) Strand = Plus / Minus Query: 171 accgaccctgaccctctacaggacttctgcgtcgcggacctcgatggcaaggcggtctcg 230 |||||| | |||||||| ||||||||||||||||| |||||||| |||| |||| || Sbjct: 27493137 accgacgcggaccctctccaggacttctgcgtcgccgacctcgacagcaa---ggtcacg 27493081 Query: 231 gtgaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcgtcc 290 ||||||||||| |||| ||||| |||| |||||||||||| |||||||||||||| Sbjct: 27493080 gtgaacgggcacgcgtgcaagccggcctcggcggccggcgacgagttcctcttctcgtct 27493021 Query: 291 aagctgaccaaggccggcaac----acgtccaccccgaacggctcggccgtgacggagct 346 ||| | ||| || |||| || ||| ||| |||||||||||| ||| |||||||| Sbjct: 27493020 aagatagccacgggcggcgacgtgaacg-ccaacccgaacggctccaacgtcacggagct 27492962 Query: 347 cgacgtggccgagtggcccgg 367 |||||| |||||||||||||| Sbjct: 27492961 cgacgtcgccgagtggcccgg 27492941 Score = 65.9 bits (33), Expect = 9e-08 Identities = 98/119 (82%), Gaps = 3/119 (2%) Strand = Plus / Minus Query: 173 cgaccctgaccctctacaggacttctgcgtcgcggacctcgatggcaaggcggtctcggt 232 ||||||||||||||| || |||||||||||||| |||||||| || | ||| || | Sbjct: 27488531 cgaccctgaccctctccaagacttctgcgtcgccgacctcga---cagcgaggtgacgtt 27488475 Query: 233 gaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcgtcca 291 ||||||| | |||| ||||||| | ||| |||||||||||| ||||||||||| |||| Sbjct: 27488474 gaacgggtacccgtgcaagcccacgccggcggccggcgacgagttcctcttctcctcca 27488416 Score = 60.0 bits (30), Expect = 5e-06 Identities = 160/201 (79%), Gaps = 8/201 (3%) Strand = Plus / Minus Query: 171 accgaccctgaccctctacaggacttctgcgtcgcggacctcgatggcaaggcggtctcg 230 |||||| | |||||||| ||||| ||||||||||| |||||| | || | ||| || Sbjct: 27497476 accgacgcggaccctctgcaggatttctgcgtcgctgacctcaa---cagcgaggtgacg 27497420 Query: 231 gtgaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcgtcc 290 ||||||||||| |||| ||||| ||||| ||||||||||| ||||||||||| ||| Sbjct: 27497419 gtgaacgggcacgcgtgcaagccggcgtcggccgccggcgacgagttcctcttctcctcc 27497360 Query: 291 aagctgaccaaggccggcaac----acgtccaccccgaacggctcggccgtgacggagct 346 ||| | ||| || |||| || ||| ||| |||||||||||| ||| |||||||| Sbjct: 27497359 aagattgccacgggcggcgacgtgaacg-ccaacccgaacggctccaacgtcacggagct 27497301 Query: 347 cgacgtggccgagtggcccgg 367 |||||| |||||||||||||| Sbjct: 27497300 cgacgtcgccgagtggcccgg 27497280 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 341 ggagctcgacgtggccgagtggcc 364 ||||||||||||||||||| |||| Sbjct: 30359714 ggagctcgacgtggccgaggggcc 30359691
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 91.7 bits (46), Expect = 2e-15 Identities = 164/201 (81%), Gaps = 8/201 (3%) Strand = Plus / Minus Query: 171 accgaccctgaccctctacaggacttctgcgtcgcggacctcgatggcaaggcggtctcg 230 |||||| | |||||||| ||||||||||||||||| |||||||| |||| |||| || Sbjct: 27591780 accgacgcggaccctctccaggacttctgcgtcgccgacctcgacagcaa---ggtcacg 27591724 Query: 231 gtgaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcgtcc 290 ||||||||||| |||| ||||| ||||| ||||||||||| ||||||||||| ||| Sbjct: 27591723 gtgaacgggcacgcgtgcaagccggcgtcggccgccggcgacgagttcctcttctcctcc 27591664 Query: 291 aagctgaccaaggccggcaac----acgtccaccccgaacggctcggccgtgacggagct 346 ||| | ||| || |||| || ||| ||| |||||||||||| ||| |||||||| Sbjct: 27591663 aagattgccacgggcggcgacgtgaacg-ccaacccgaacggctccaacgtcacggagct 27591605 Query: 347 cgacgtggccgagtggcccgg 367 |||||| |||||||||||||| Sbjct: 27591604 cgacgtcgccgagtggcccgg 27591584 Score = 91.7 bits (46), Expect = 2e-15 Identities = 164/201 (81%), Gaps = 8/201 (3%) Strand = Plus / Minus Query: 171 accgaccctgaccctctacaggacttctgcgtcgcggacctcgatggcaaggcggtctcg 230 |||||| | |||||||| ||||||||||||||||| |||||||| |||| |||| || Sbjct: 27584460 accgacgcggaccctctccaggacttctgcgtcgccgacctcgacagcaa---ggtcacg 27584404 Query: 231 gtgaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcgtcc 290 ||||||||||| |||| ||||| |||| |||||||||||| |||||||||||||| Sbjct: 27584403 gtgaacgggcacgcgtgcaagccggcctcggcggccggcgacgagttcctcttctcgtct 27584344 Query: 291 aagctgaccaaggccggcaac----acgtccaccccgaacggctcggccgtgacggagct 346 ||| | ||| || |||| || ||| ||| |||||||||||| ||| |||||||| Sbjct: 27584343 aagatagccacgggcggcgacgtgaacg-ccaacccgaacggctccaacgtcacggagct 27584285 Query: 347 cgacgtggccgagtggcccgg 367 |||||| |||||||||||||| Sbjct: 27584284 cgacgtcgccgagtggcccgg 27584264 Score = 65.9 bits (33), Expect = 9e-08 Identities = 98/119 (82%), Gaps = 3/119 (2%) Strand = Plus / Minus Query: 173 cgaccctgaccctctacaggacttctgcgtcgcggacctcgatggcaaggcggtctcggt 232 ||||||||||||||| || |||||||||||||| |||||||| || | ||| || | Sbjct: 27579854 cgaccctgaccctctccaagacttctgcgtcgccgacctcga---cagcgaggtgacgtt 27579798 Query: 233 gaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcgtcca 291 ||||||| | |||| ||||||| | ||| |||||||||||| ||||||||||| |||| Sbjct: 27579797 gaacgggtacccgtgcaagcccacgccggcggccggcgacgagttcctcttctcctcca 27579739 Score = 60.0 bits (30), Expect = 5e-06 Identities = 160/201 (79%), Gaps = 8/201 (3%) Strand = Plus / Minus Query: 171 accgaccctgaccctctacaggacttctgcgtcgcggacctcgatggcaaggcggtctcg 230 |||||| | |||||||| ||||| ||||||||||| |||||| | || | ||| || Sbjct: 27588799 accgacgcggaccctctgcaggatttctgcgtcgctgacctcaa---cagcgaggtgacg 27588743 Query: 231 gtgaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcgtcc 290 ||||||||||| |||| ||||| ||||| ||||||||||| ||||||||||| ||| Sbjct: 27588742 gtgaacgggcacgcgtgcaagccggcgtcggccgccggcgacgagttcctcttctcctcc 27588683 Query: 291 aagctgaccaaggccggcaac----acgtccaccccgaacggctcggccgtgacggagct 346 ||| | ||| || |||| || ||| ||| |||||||||||| ||| |||||||| Sbjct: 27588682 aagattgccacgggcggcgacgtgaacg-ccaacccgaacggctccaacgtcacggagct 27588624 Query: 347 cgacgtggccgagtggcccgg 367 |||||| |||||||||||||| Sbjct: 27588623 cgacgtcgccgagtggcccgg 27588603 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 341 ggagctcgacgtggccgagtggcc 364 ||||||||||||||||||| |||| Sbjct: 30451136 ggagctcgacgtggccgaggggcc 30451113
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete sequence Length = 123406 Score = 91.7 bits (46), Expect = 2e-15 Identities = 164/201 (81%), Gaps = 8/201 (3%) Strand = Plus / Plus Query: 171 accgaccctgaccctctacaggacttctgcgtcgcggacctcgatggcaaggcggtctcg 230 |||||| | |||||||| ||||||||||||||||| |||||||| |||| |||| || Sbjct: 57377 accgacgcggaccctctccaggacttctgcgtcgccgacctcgacagcaa---ggtcacg 57433 Query: 231 gtgaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcgtcc 290 ||||||||||| |||| ||||| |||| |||||||||||| |||||||||||||| Sbjct: 57434 gtgaacgggcacgcgtgcaagccggcctcggcggccggcgacgagttcctcttctcgtct 57493 Query: 291 aagctgaccaaggccggcaac----acgtccaccccgaacggctcggccgtgacggagct 346 ||| | ||| || |||| || ||| ||| |||||||||||| ||| |||||||| Sbjct: 57494 aagatagccacgggcggcgacgtgaacg-ccaacccgaacggctccaacgtcacggagct 57552 Query: 347 cgacgtggccgagtggcccgg 367 |||||| |||||||||||||| Sbjct: 57553 cgacgtcgccgagtggcccgg 57573 Score = 91.7 bits (46), Expect = 2e-15 Identities = 164/201 (81%), Gaps = 8/201 (3%) Strand = Plus / Plus Query: 171 accgaccctgaccctctacaggacttctgcgtcgcggacctcgatggcaaggcggtctcg 230 |||||| | |||||||| ||||||||||||||||| |||||||| |||| |||| || Sbjct: 50057 accgacgcggaccctctccaggacttctgcgtcgccgacctcgacagcaa---ggtcacg 50113 Query: 231 gtgaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcgtcc 290 ||||||||||| |||| ||||| ||||| ||||||||||| ||||||||||| ||| Sbjct: 50114 gtgaacgggcacgcgtgcaagccggcgtcggccgccggcgacgagttcctcttctcctcc 50173 Query: 291 aagctgaccaaggccggcaac----acgtccaccccgaacggctcggccgtgacggagct 346 ||| | ||| || |||| || ||| ||| |||||||||||| ||| |||||||| Sbjct: 50174 aagattgccacgggcggcgacgtgaacg-ccaacccgaacggctccaacgtcacggagct 50232 Query: 347 cgacgtggccgagtggcccgg 367 |||||| |||||||||||||| Sbjct: 50233 cgacgtcgccgagtggcccgg 50253 Score = 65.9 bits (33), Expect = 9e-08 Identities = 98/119 (82%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 173 cgaccctgaccctctacaggacttctgcgtcgcggacctcgatggcaaggcggtctcggt 232 ||||||||||||||| || |||||||||||||| |||||||| || | ||| || | Sbjct: 61983 cgaccctgaccctctccaagacttctgcgtcgccgacctcga---cagcgaggtgacgtt 62039 Query: 233 gaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcgtcca 291 ||||||| | |||| ||||||| | ||| |||||||||||| ||||||||||| |||| Sbjct: 62040 gaacgggtacccgtgcaagcccacgccggcggccggcgacgagttcctcttctcctcca 62098 Score = 60.0 bits (30), Expect = 5e-06 Identities = 160/201 (79%), Gaps = 8/201 (3%) Strand = Plus / Plus Query: 171 accgaccctgaccctctacaggacttctgcgtcgcggacctcgatggcaaggcggtctcg 230 |||||| | |||||||| ||||| ||||||||||| |||||| | || | ||| || Sbjct: 53038 accgacgcggaccctctgcaggatttctgcgtcgctgacctcaa---cagcgaggtgacg 53094 Query: 231 gtgaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcgtcc 290 ||||||||||| |||| ||||| ||||| ||||||||||| ||||||||||| ||| Sbjct: 53095 gtgaacgggcacgcgtgcaagccggcgtcggccgccggcgacgagttcctcttctcctcc 53154 Query: 291 aagctgaccaaggccggcaac----acgtccaccccgaacggctcggccgtgacggagct 346 ||| | ||| || |||| || ||| ||| |||||||||||| ||| |||||||| Sbjct: 53155 aagattgccacgggcggcgacgtgaacg-ccaacccgaacggctccaacgtcacggagct 53213 Query: 347 cgacgtggccgagtggcccgg 367 |||||| |||||||||||||| Sbjct: 53214 cgacgtcgccgagtggcccgg 53234
>dbj|AK059872.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F02, full insert sequence Length = 1028 Score = 91.7 bits (46), Expect = 2e-15 Identities = 164/201 (81%), Gaps = 8/201 (3%) Strand = Plus / Plus Query: 171 accgaccctgaccctctacaggacttctgcgtcgcggacctcgatggcaaggcggtctcg 230 |||||| | |||||||| ||||||||||||||||| |||||||| |||| |||| || Sbjct: 232 accgacgcggaccctctccaggacttctgcgtcgccgacctcgacagcaa---ggtcacg 288 Query: 231 gtgaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcgtcc 290 ||||||||||| |||| ||||| ||||| ||||||||||| ||||||||||| ||| Sbjct: 289 gtgaacgggcacgcgtgcaagccggcgtcggccgccggcgacgagttcctcttctcctcc 348 Query: 291 aagctgaccaaggccggcaac----acgtccaccccgaacggctcggccgtgacggagct 346 ||| | ||| || |||| || ||| ||| |||||||||||| ||| |||||||| Sbjct: 349 aagattgccacgggcggcgacgtgaacg-ccaacccgaacggctccaacgtcacggagct 407 Query: 347 cgacgtggccgagtggcccgg 367 |||||| |||||||||||||| Sbjct: 408 cgacgtcgccgagtggcccgg 428
>ref|XM_469349.1| Oryza sativa (japonica cultivar-group), mRNA Length = 684 Score = 65.9 bits (33), Expect = 9e-08 Identities = 98/119 (82%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 173 cgaccctgaccctctacaggacttctgcgtcgcggacctcgatggcaaggcggtctcggt 232 ||||||||||||||| || |||||||||||||| |||||||| || | ||| || | Sbjct: 81 cgaccctgaccctctccaagacttctgcgtcgccgacctcga---cagcgaggtgacgtt 137 Query: 233 gaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcgtcca 291 ||||||| | |||| ||||||| | ||| |||||||||||| ||||||||||| |||| Sbjct: 138 gaacgggtacccgtgcaagcccacgccggcggccggcgacgagttcctcttctcctcca 196
>dbj|AK103716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033137P21, full insert sequence Length = 998 Score = 65.9 bits (33), Expect = 9e-08 Identities = 98/119 (82%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 173 cgaccctgaccctctacaggacttctgcgtcgcggacctcgatggcaaggcggtctcggt 232 ||||||||||||||| || |||||||||||||| |||||||| || | ||| || | Sbjct: 207 cgaccctgaccctctccaagacttctgcgtcgccgacctcga---cagcgaggtgacgtt 263 Query: 233 gaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcgtcca 291 ||||||| | |||| ||||||| | ||| |||||||||||| ||||||||||| |||| Sbjct: 264 gaacgggtacccgtgcaagcccacgccggcggccggcgacgagttcctcttctcctcca 322
>ref|XM_469351.1| Oryza sativa (japonica cultivar-group), mRNA Length = 684 Score = 60.0 bits (30), Expect = 5e-06 Identities = 160/201 (79%), Gaps = 8/201 (3%) Strand = Plus / Plus Query: 171 accgaccctgaccctctacaggacttctgcgtcgcggacctcgatggcaaggcggtctcg 230 |||||| | |||||||| ||||| ||||||||||| |||||| | || | ||| || Sbjct: 79 accgacgcggaccctctgcaggatttctgcgtcgctgacctcaa---cagcgaggtgacg 135 Query: 231 gtgaacgggcatacgtgtaagcccatgtcggaggccggcgacgacttcctcttctcgtcc 290 ||||||||||| |||| ||||| ||||| ||||||||||| ||||||||||| ||| Sbjct: 136 gtgaacgggcacgcgtgcaagccggcgtcggccgccggcgacgagttcctcttctcctcc 195 Query: 291 aagctgaccaaggccggcaac----acgtccaccccgaacggctcggccgtgacggagct 346 ||| | ||| || |||| || ||| ||| |||||||||||| ||| |||||||| Sbjct: 196 aagattgccacgggcggcgacgtgaacg-ccaacccgaacggctccaacgtcacggagct 254 Query: 347 cgacgtggccgagtggcccgg 367 |||||| |||||||||||||| Sbjct: 255 cgacgtcgccgagtggcccgg 275
>ref|XM_476095.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 693 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 181 accctctacaggacttctgcgtcgcggacc 210 ||||||| ||||||||||||||||| |||| Sbjct: 95 accctctccaggacttctgcgtcgccgacc 124
>gb|AC135427.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617H07, complete sequence Length = 114135 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 181 accctctacaggacttctgcgtcgcggacc 210 ||||||| ||||||||||||||||| |||| Sbjct: 111027 accctctccaggacttctgcgtcgccgacc 111056
>gb|AC132493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636E04, complete sequence Length = 141171 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 181 accctctacaggacttctgcgtcgcggacc 210 ||||||| ||||||||||||||||| |||| Sbjct: 41837 accctctccaggacttctgcgtcgccgacc 41866
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 181 accctctacaggacttctgcgtcgcggacc 210 ||||||| ||||||||||||||||| |||| Sbjct: 5904263 accctctccaggacttctgcgtcgccgacc 5904292 Score = 40.1 bits (20), Expect = 5.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 173 cgaccctgaccctctacaggacttctgcgtcgcggacctc 212 ||||||||||| || |||||| |||||||||| |||||| Sbjct: 11366905 cgaccctgacctgctccaggacatctgcgtcgctgacctc 11366944 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 ggagctcgacgtggccgagtggcc 364 ||||||||||||||||||| |||| Sbjct: 1538113 ggagctcgacgtggccgaggggcc 1538136
>gb|AY098510.1| Ananas comosus germin-like protein mRNA, complete cds Length = 783 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 180 gaccctctacaggacttctgcgtcgc 205 |||||||| ||||||||||||||||| Sbjct: 105 gaccctctgcaggacttctgcgtcgc 130
>ref|XM_482868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1811 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 ctcgacgtggccgagtggccc 365 ||||||||||||||||||||| Sbjct: 482 ctcgacgtggccgagtggccc 502
>ref|XM_482867.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2751 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 ctcgacgtggccgagtggccc 365 ||||||||||||||||||||| Sbjct: 2298 ctcgacgtggccgagtggccc 2278
>ref|XM_482864.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1811 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 ctcgacgtggccgagtggccc 365 ||||||||||||||||||||| Sbjct: 482 ctcgacgtggccgagtggccc 502
>ref|XM_482863.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3147 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 ctcgacgtggccgagtggccc 365 ||||||||||||||||||||| Sbjct: 2418 ctcgacgtggccgagtggccc 2398
>gb|AY207498.1| Chlamydomonas reinhardtii CR061 protein gene, complete cds Length = 5837 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 196 tctgcgtcgcggacctcgatggcaa 220 |||||| |||||||||||||||||| Sbjct: 5249 tctgcgccgcggacctcgatggcaa 5273
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 ccgaacggctcggccgtgacg 341 ||||||||||||||||||||| Sbjct: 1835404 ccgaacggctcggccgtgacg 1835424
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 196 tctgcgtcgcggacctcgatggcaa 220 |||||| |||||||||||||||||| Sbjct: 41624 tctgcgccgcggacctcgatggcaa 41600
>gb|AC090433.10| Chlamydomonas reinhardtii clone cr-19b23, complete sequence Length = 118183 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 196 tctgcgtcgcggacctcgatggcaa 220 |||||| |||||||||||||||||| Sbjct: 101607 tctgcgccgcggacctcgatggcaa 101583
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 cgaacggctcggccgtgacgg 342 ||||||||||||||||||||| Sbjct: 1102815 cgaacggctcggccgtgacgg 1102835
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 ctcgacgtggccgagtggccc 365 ||||||||||||||||||||| Sbjct: 23045161 ctcgacgtggccgagtggccc 23045181 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 ctcgacgtggccgagtggccc 365 ||||||||||||||||||||| Sbjct: 23030536 ctcgacgtggccgagtggccc 23030516
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 ctcgacgtggccgagtggccc 365 ||||||||||||||||||||| Sbjct: 22329235 ctcgacgtggccgagtggccc 22329215
>dbj|AP002908.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0013G02 Length = 163419 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 ctcgacgtggccgagtggccc 365 ||||||||||||||||||||| Sbjct: 26505 ctcgacgtggccgagtggccc 26485
>dbj|AP003310.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0022F12 Length = 137716 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 ctcgacgtggccgagtggccc 365 ||||||||||||||||||||| Sbjct: 111714 ctcgacgtggccgagtggccc 111694
>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470B03 Length = 163371 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 ctcgacgtggccgagtggccc 365 ||||||||||||||||||||| Sbjct: 104889 ctcgacgtggccgagtggccc 104909 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 ctcgacgtggccgagtggccc 365 ||||||||||||||||||||| Sbjct: 90264 ctcgacgtggccgagtggccc 90244
>dbj|AK121810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098A20, full insert sequence Length = 3147 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 ctcgacgtggccgagtggccc 365 ||||||||||||||||||||| Sbjct: 2418 ctcgacgtggccgagtggccc 2398
>dbj|AK107363.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-A08, full insert sequence Length = 1811 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 ctcgacgtggccgagtggccc 365 ||||||||||||||||||||| Sbjct: 482 ctcgacgtggccgagtggccc 502
>dbj|AK102363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091J17, full insert sequence Length = 2361 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 ctcgacgtggccgagtggccc 365 ||||||||||||||||||||| Sbjct: 1675 ctcgacgtggccgagtggccc 1655
>dbj|AK101662.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057L03, full insert sequence Length = 1970 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 ctcgacgtggccgagtggccc 365 ||||||||||||||||||||| Sbjct: 1162 ctcgacgtggccgagtggccc 1142
>emb|X15820.1|OSNIA134 Oryza sativa partial nia1 gene for nitrate reductase apoenzyme, exons 3-4 Length = 2000 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 ctcgacgtggccgagtggccc 365 ||||||||||||||||||||| Sbjct: 1332 ctcgacgtggccgagtggccc 1312
>gb|AF082100.1|AF082100 Streptomyces sp. MA6548 FK506 peptide synthetase (fkbP), FK506 oxidase (fkbO), and FK506 polyketide synthase (fkbB) genes, complete cds Length = 28732 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 ccgaacggctcggccgtgacg 341 ||||||||||||||||||||| Sbjct: 3374 ccgaacggctcggccgtgacg 3394
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 gccggcgacgacttcctcttc 284 ||||||||||||||||||||| Sbjct: 770989 gccggcgacgacttcctcttc 771009
>ref|XM_476264.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 666 Score = 40.1 bits (20), Expect = 5.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 173 cgaccctgaccctctacaggacttctgcgtcgcggacctc 212 ||||||||||| || |||||| |||||||||| |||||| Sbjct: 78 cgaccctgacctgctccaggacatctgcgtcgctgacctc 117
>ref|XM_469713.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3150 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 341 ggagctcgacgtggccgagtggcc 364 ||||||||||||||||||| |||| Sbjct: 1576 ggagctcgacgtggccgaggggcc 1553
>ref|XM_472672.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1827 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 341 ggagctcgacgtggccgagtggcc 364 ||||||||||||||||||| |||| Sbjct: 1438 ggagctcgacgtggccgaggggcc 1415
>gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0019D02, complete sequence Length = 154692 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 ccggcgacgacttcctcttc 284 |||||||||||||||||||| Sbjct: 75563 ccggcgacgacttcctcttc 75544
>gb|AC145273.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0055E23, complete sequence Length = 156572 Score = 40.1 bits (20), Expect = 5.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 173 cgaccctgaccctctacaggacttctgcgtcgcggacctc 212 ||||||||||| || |||||| |||||||||| |||||| Sbjct: 92182 cgaccctgacctgctccaggacatctgcgtcgctgacctc 92221
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gacttctgcgtcgcggacct 211 |||||||||||||||||||| Sbjct: 1968731 gacttctgcgtcgcggacct 1968750
>emb|AL353789.18| Human DNA sequence from clone RP11-570F6 on chromosome 13 Contains the 5' end of the WASF3 gene for WAS protein family, member 3 (WASP family Verprolin-homologous protein 3(SCAR3, Scar3, WAVE3, KIAA0900)), a ribosomal protein S3A (RPS3A)(FTE1) pseudogene and a CpG island, complete sequence Length = 166787 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 aaaaacctaggggctggcct 133 |||||||||||||||||||| Sbjct: 90208 aaaaacctaggggctggcct 90189
>gb|AY321087.1| Pinus pinaster chalcone synthase (chs3) mRNA, complete cds Length = 1486 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 gacgacttcctcttctcgtccaag 293 |||||||||||| ||||||||||| Sbjct: 1151 gacgacttcctcatctcgtccaag 1128
>emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086B14, complete sequence Length = 175698 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 341 ggagctcgacgtggccgagtggcc 364 ||||||||||||||||||| |||| Sbjct: 69131 ggagctcgacgtggccgaggggcc 69108
>gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic sequence, complete sequence Length = 149380 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 ggagctcgacgtggccgagtggcc 364 ||||||||||||||||||| |||| Sbjct: 117301 ggagctcgacgtggccgaggggcc 117324
>gb|DQ371806.1| Picea abies chalcone synthase (CHS) gene, CHS-A1 allele, complete cds Length = 1294 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 gacgacttcctcttctcgtccaag 293 |||||||||||| ||||||||||| Sbjct: 1179 gacgacttcctcatctcgtccaag 1156
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 341 ggagctcgacgtggccgagtggcc 364 ||||||||||||||||||| |||| Sbjct: 22465376 ggagctcgacgtggccgaggggcc 22465353
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 ccggcgacgacttcctcttc 284 |||||||||||||||||||| Sbjct: 19030299 ccggcgacgacttcctcttc 19030280
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 341 ggagctcgacgtggccgagtggcc 364 ||||||||||||||||||| |||| Sbjct: 11327399 ggagctcgacgtggccgaggggcc 11327376
>gb|AY168851.1| Pinus pinaster chalcone synthase (chs2) mRNA, complete cds Length = 1476 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 gacgacttcctcttctcgtccaag 293 |||||||||||| ||||||||||| Sbjct: 1141 gacgacttcctcatctcgtccaag 1118
>gb|AC093576.3| Homo sapiens chromosome 1 clone RP11-359C24, complete sequence Length = 185461 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 ctaaaaacctaggggctggcctgt 135 ||||||||||||| |||||||||| Sbjct: 80608 ctaaaaacctaggagctggcctgt 80585
>dbj|AP005414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073G17 Length = 162391 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 341 ggagctcgacgtggccgagtggcc 364 ||||||||||||||||||| |||| Sbjct: 130214 ggagctcgacgtggccgaggggcc 130191
>gb|AE005104.1| Halobacterium sp. NRC-1 section 135 of 170 of the complete genome Length = 13848 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 ggcggtctcggtgaacgggc 240 |||||||||||||||||||| Sbjct: 6998 ggcggtctcggtgaacgggc 7017
>dbj|AK105351.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-A07, full insert sequence Length = 840 Score = 40.1 bits (20), Expect = 5.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 173 cgaccctgaccctctacaggacttctgcgtcgcggacctc 212 ||||||||||| || |||||| |||||||||| |||||| Sbjct: 107 cgaccctgacctgctccaggacatctgcgtcgctgacctc 146
>gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683F12, complete sequence Length = 144455 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 ggagctcgacgtggccgagtggcc 364 ||||||||||||||||||| |||| Sbjct: 132193 ggagctcgacgtggccgaggggcc 132216 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,293,691 Number of Sequences: 3902068 Number of extensions: 2293691 Number of successful extensions: 39075 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 74 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 38553 Number of HSP's gapped (non-prelim): 505 length of query: 380 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 358 effective length of database: 17,147,199,772 effective search space: 6138697518376 effective search space used: 6138697518376 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
