ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast15c06 |
|---|---|
| Clone Library Name | barley_pub |
>ACP2_HORVU (P08817) Acyl carrier protein 2, chloroplast precursor (Acyl| carrier protein II) (ACP II) Length = 129 Score = 125 bits (315), Expect(2) = 4e-31 Identities = 63/63 (100%), Positives = 63/63 (100%) Frame = +2 Query: 158 KAICVNSVSFSALRKDNVSFRLQPVPQRFSVCCAAKKETVEKVCDIVKSQLALSDDTEVS 337 KAICVNSVSFSALRKDNVSFRLQPVPQRFSVCCAAKKETVEKVCDIVKSQLALSDDTEVS Sbjct: 16 KAICVNSVSFSALRKDNVSFRLQPVPQRFSVCCAAKKETVEKVCDIVKSQLALSDDTEVS 75 Query: 338 GSS 346 GSS Sbjct: 76 GSS 78 Score = 26.6 bits (57), Expect(2) = 4e-31 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = +1 Query: 349 FADLGADSLDTDE 387 FADLGADSLDT E Sbjct: 80 FADLGADSLDTVE 92
>ACP3_HORVU (P15543) Acyl carrier protein 3, chloroplast precursor (Acyl| carrier protein III) (ACP III) Length = 132 Score = 83.6 bits (205), Expect(2) = 4e-18 Identities = 39/63 (61%), Positives = 50/63 (79%) Frame = +2 Query: 158 KAICVNSVSFSALRKDNVSFRLQPVPQRFSVCCAAKKETVEKVCDIVKSQLALSDDTEVS 337 KAI NS+SFS R+ N RLQPVP RF+VCC+AK++TVEKVC+IVK QLA+ + TEV Sbjct: 16 KAINTNSLSFSGARRGNAFLRLQPVPMRFAVCCSAKQDTVEKVCEIVKKQLAVPEGTEVC 75 Query: 338 GSS 346 G++ Sbjct: 76 GTT 78 Score = 25.4 bits (54), Expect(2) = 4e-18 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = +1 Query: 349 FADLGADSLDTDE 387 F+DLGADSLDT E Sbjct: 80 FSDLGADSLDTVE 92
>ACP1_CASGL (P93092) Acyl carrier protein 1, chloroplast precursor (ACP 1)| Length = 136 Score = 57.4 bits (137), Expect(2) = 5e-10 Identities = 33/64 (51%), Positives = 38/64 (59%) Frame = +2 Query: 170 VNSVSFSALRKDNVSFRLQPVPQRFSVCCAAKKETVEKVCDIVKSQLALSDDTEVSGSSH 349 + SVS K R++ RF VCCAAK ETVEKVC IVK QLAL DD+ V+G S Sbjct: 26 LRSVSLPIKGKSFAPLRMRSA--RFVVCCAAKPETVEKVCAIVKKQLALPDDSAVTGESK 83 Query: 350 LLIL 361 L Sbjct: 84 FATL 87 Score = 23.9 bits (50), Expect(2) = 5e-10 Identities = 11/13 (84%), Positives = 11/13 (84%) Frame = +1 Query: 349 FADLGADSLDTDE 387 FA LGADSLDT E Sbjct: 84 FATLGADSLDTVE 96
>ACP2_ARATH (P25701) Acyl carrier protein 2, chloroplast precursor (ACP)| Length = 136 Score = 56.6 bits (135), Expect(2) = 1e-09 Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 1/68 (1%) Frame = +2 Query: 161 AICVNSV-SFSALRKDNVSFRLQPVPQRFSVCCAAKKETVEKVCDIVKSQLALSDDTEVS 337 AI + V SFS R+ ++SF L+ +P R +V CAAK ETV+KVC +V+ QL+L + E++ Sbjct: 20 AIAASQVKSFSNGRRSSLSFNLRQLPTRLTVSCAAKPETVDKVCAVVRKQLSLKEADEIT 79 Query: 338 GSSHLLIL 361 ++ L Sbjct: 80 AATKFAAL 87 Score = 23.5 bits (49), Expect(2) = 1e-09 Identities = 11/13 (84%), Positives = 11/13 (84%) Frame = +1 Query: 349 FADLGADSLDTDE 387 FA LGADSLDT E Sbjct: 84 FAALGADSLDTVE 96
>ACP_BRACM (P07088) Acyl carrier protein SF2, chloroplast precursor (ACP)| Length = 134 Score = 52.8 bits (125), Expect(2) = 2e-09 Identities = 27/44 (61%), Positives = 33/44 (75%), Gaps = 1/44 (2%) Frame = +2 Query: 206 NVSFRLQ-PVPQRFSVCCAAKKETVEKVCDIVKSQLALSDDTEV 334 N+SF L+ +P RFS+ CAAK ETVEKV IVK QL+L DD +V Sbjct: 34 NLSFNLRRSIPTRFSISCAAKPETVEKVSKIVKKQLSLKDDQKV 77 Score = 26.6 bits (57), Expect(2) = 2e-09 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = +1 Query: 349 FADLGADSLDTDE 387 FADLGADSLDT E Sbjct: 83 FADLGADSLDTVE 95
>ACP3_ARATH (P25702) Acyl carrier protein 3, chloroplast precursor (ACP)| Length = 136 Score = 55.5 bits (132), Expect(2) = 3e-09 Identities = 26/60 (43%), Positives = 40/60 (66%) Frame = +2 Query: 182 SFSALRKDNVSFRLQPVPQRFSVCCAAKKETVEKVCDIVKSQLALSDDTEVSGSSHLLIL 361 SFS + N+SF L+ +P R +V CAAK ETV+KVC +V+ QL+L + E++ ++ L Sbjct: 28 SFSYGSRSNLSFNLRQLPTRLTVYCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAAL 87 Score = 23.5 bits (49), Expect(2) = 3e-09 Identities = 11/13 (84%), Positives = 11/13 (84%) Frame = +1 Query: 349 FADLGADSLDTDE 387 FA LGADSLDT E Sbjct: 84 FAALGADSLDTVE 96
>ACP1_HORVU (P02902) Acyl carrier protein 1, chloroplast precursor (Acyl| carrier protein I) (ACP I) Length = 149 Score = 54.7 bits (130), Expect(2) = 3e-09 Identities = 31/64 (48%), Positives = 39/64 (60%), Gaps = 6/64 (9%) Frame = +2 Query: 173 NSVSFSALRKDNVSFRLQPVPQRFSVCCAA------KKETVEKVCDIVKSQLALSDDTEV 334 +SVSF + + VS +P RF +CCAA KKETV+KVC IVK QLA+ D T V Sbjct: 32 SSVSFHSRQMSFVSISSRPSSLRFKICCAAMGEAQAKKETVDKVCMIVKKQLAVPDGTPV 91 Query: 335 SGSS 346 + S Sbjct: 92 TAES 95 Score = 23.9 bits (50), Expect(2) = 3e-09 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = +1 Query: 349 FADLGADSLDTDE 387 F++LGADSLDT E Sbjct: 97 FSELGADSLDTVE 109
>ACP3_CUPLA (P52413) Acyl carrier protein 3, chloroplast precursor (ACP)| Length = 143 Score = 55.5 bits (132), Expect(2) = 4e-09 Identities = 30/59 (50%), Positives = 37/59 (62%) Frame = +2 Query: 170 VNSVSFSALRKDNVSFRLQPVPQRFSVCCAAKKETVEKVCDIVKSQLALSDDTEVSGSS 346 + SVS K S R P F VCC AK+ETV +VC+IVK QLAL +D+EV+G S Sbjct: 32 LRSVSLPISGKIFPSLRSSRGPLSFRVCCQAKQETVTRVCEIVKKQLALPEDSEVNGLS 90 Score = 22.7 bits (47), Expect(2) = 4e-09 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = +1 Query: 340 LLPFADLGADSLDTDE 387 L F+ LGADSLDT E Sbjct: 89 LSKFSALGADSLDTVE 104
>ACP2_BRANA (P17650) Acyl carrier protein, chloroplast precursor (ACP) (ACP09)| (Clone 22C01) Length = 134 Score = 51.2 bits (121), Expect(2) = 6e-09 Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%) Frame = +2 Query: 200 KDNVSFRLQ-PVPQRFSVCCAAKKETVEKVCDIVKSQLALSDDTEV 334 + N+SF L+ +P R SV CAAK ETVEKV IVK QL+L DD +V Sbjct: 32 RTNLSFNLRRSIPTRLSVSCAAKPETVEKVSKIVKKQLSLKDDQKV 77 Score = 26.6 bits (57), Expect(2) = 6e-09 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = +1 Query: 349 FADLGADSLDTDE 387 FADLGADSLDT E Sbjct: 83 FADLGADSLDTVE 95
>ACP3_BRANA (P32887) Acyl carrier protein, chloroplast precursor (ACP) (Clones| 34C02 and 10C04) Length = 134 Score = 50.8 bits (120), Expect(2) = 7e-09 Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%) Frame = +2 Query: 200 KDNVSFRLQ-PVPQRFSVCCAAKKETVEKVCDIVKSQLALSDDTEV 334 + N+SF L+ +P R SV CAAK ET+EKV IVK QL+L DD +V Sbjct: 32 RTNLSFNLRRSIPTRLSVSCAAKPETIEKVSKIVKKQLSLKDDQKV 77 Score = 26.6 bits (57), Expect(2) = 7e-09 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = +1 Query: 349 FADLGADSLDTDE 387 FADLGADSLDT E Sbjct: 83 FADLGADSLDTVE 95
>ACP1_BRANA (P10352) Acyl carrier protein, chloroplast precursor (ACP) (ACP05)| (Clone 29C08) Length = 134 Score = 50.8 bits (120), Expect(2) = 7e-09 Identities = 27/46 (58%), Positives = 32/46 (69%), Gaps = 1/46 (2%) Frame = +2 Query: 200 KDNVSFRL-QPVPQRFSVCCAAKKETVEKVCDIVKSQLALSDDTEV 334 + N+SF L + +P R SV CAAK ETVEKV IVK QL+L DD V Sbjct: 32 RTNLSFNLSRSIPTRLSVSCAAKPETVEKVSKIVKKQLSLKDDQNV 77 Score = 26.6 bits (57), Expect(2) = 7e-09 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = +1 Query: 349 FADLGADSLDTDE 387 FADLGADSLDT E Sbjct: 83 FADLGADSLDTVE 95
>ACP1_CUPLA (P52411) Acyl carrier protein 1, chloroplast precursor (ACP)| Length = 140 Score = 51.2 bits (121), Expect(2) = 8e-08 Identities = 30/59 (50%), Positives = 36/59 (61%) Frame = +2 Query: 170 VNSVSFSALRKDNVSFRLQPVPQRFSVCCAAKKETVEKVCDIVKSQLALSDDTEVSGSS 346 V+ SF +L+ SF L+ V C AK ETV KVC IVK QLAL DD+EV+G S Sbjct: 35 VSRKSFPSLKSSKSSFALR-------VSCQAKPETVAKVCGIVKKQLALPDDSEVNGLS 86 Score = 22.7 bits (47), Expect(2) = 8e-08 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = +1 Query: 340 LLPFADLGADSLDTDE 387 L F+ LGADSLDT E Sbjct: 85 LSKFSALGADSLDTVE 100
>ACP5_BRANA (P08971) Acyl carrier protein, chloroplast precursor (ACP) (Clones| 28F10, 10H11/11D11, 34F12 and 04F05/05E01) Length = 134 Score = 48.5 bits (114), Expect(2) = 1e-07 Identities = 25/45 (55%), Positives = 32/45 (71%) Frame = +2 Query: 200 KDNVSFRLQPVPQRFSVCCAAKKETVEKVCDIVKSQLALSDDTEV 334 + N+SF L R S+ CAAK+ETVEKV +IVK QL+L DD +V Sbjct: 35 RTNLSFNLSRT--RLSISCAAKQETVEKVSEIVKKQLSLKDDQQV 77 Score = 25.0 bits (53), Expect(2) = 1e-07 Identities = 11/13 (84%), Positives = 11/13 (84%) Frame = +1 Query: 349 FADLGADSLDTDE 387 F DLGADSLDT E Sbjct: 83 FVDLGADSLDTVE 95
>ACP2_SPIOL (P23235) Acyl carrier protein 2, chloroplast precursor (Acyl| carrier protein II) (ACP II) Length = 130 Score = 50.1 bits (118), Expect(2) = 1e-07 Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 1/53 (1%) Frame = +2 Query: 191 ALRKDNVSFRLQPV-PQRFSVCCAAKKETVEKVCDIVKSQLALSDDTEVSGSS 346 AL+ +R PV P+ SV CAAK E V KV DIVKSQLAL++D +V+G + Sbjct: 26 ALKSSVTFWRRTPVMPRGLSVSCAAKPEMVTKVSDIVKSQLALAEDAKVTGET 78 Score = 23.1 bits (48), Expect(2) = 1e-07 Identities = 9/13 (69%), Positives = 12/13 (92%) Frame = +1 Query: 349 FADLGADSLDTDE 387 F+++GADSLDT E Sbjct: 80 FSEIGADSLDTVE 92
>ACP2_CUPLA (P52412) Acyl carrier protein 2, chloroplast precursor (ACP)| Length = 137 Score = 50.4 bits (119), Expect(2) = 2e-07 Identities = 33/75 (44%), Positives = 41/75 (54%), Gaps = 13/75 (17%) Frame = +2 Query: 161 AICVNSVSFSALRKDNVSFRLQ---PVPQR----------FSVCCAAKKETVEKVCDIVK 301 +IC+ S S SAL +S PV ++ V C AK ETV KVC+IVK Sbjct: 9 SICIKSASCSALAPGRISSLRSVSLPVSRKSFFSRRGSFSLRVNCQAKPETVTKVCNIVK 68 Query: 302 SQLALSDDTEVSGSS 346 QLAL DD++VSG S Sbjct: 69 KQLALPDDSDVSGVS 83 Score = 22.3 bits (46), Expect(2) = 2e-07 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = +1 Query: 349 FADLGADSLDTDE 387 F+ LGADSLDT E Sbjct: 85 FSALGADSLDTVE 97
>ACP1_ARATH (P11829) Acyl carrier protein 1, chloroplast precursor (ACP)| Length = 137 Score = 46.2 bits (108), Expect(2) = 2e-07 Identities = 26/47 (55%), Positives = 35/47 (74%), Gaps = 2/47 (4%) Frame = +2 Query: 200 KDNVSFRLQ-PVP-QRFSVCCAAKKETVEKVCDIVKSQLALSDDTEV 334 K N+SF L+ +P +R SV CAAK+ET+EKV IVK QL+L+ D +V Sbjct: 34 KTNLSFNLRRSIPSRRLSVSCAAKQETIEKVSAIVKKQLSLTPDKKV 80 Score = 26.6 bits (57), Expect(2) = 2e-07 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = +1 Query: 349 FADLGADSLDTDE 387 FADLGADSLDT E Sbjct: 86 FADLGADSLDTVE 98
>ACP4_CUPLA (P52414) Acyl carrier protein 4, chloroplast precursor (ACP)| Length = 139 Score = 48.9 bits (115), Expect(2) = 4e-07 Identities = 30/59 (50%), Positives = 34/59 (57%) Frame = +2 Query: 170 VNSVSFSALRKDNVSFRLQPVPQRFSVCCAAKKETVEKVCDIVKSQLALSDDTEVSGSS 346 V+ SF +LR SF V C AK ETV KVC IVK QLAL DD+EV+G S Sbjct: 35 VSRKSFPSLRSSKGSFA--------RVSCQAKPETVAKVCRIVKKQLALPDDSEVNGLS 85 Score = 22.7 bits (47), Expect(2) = 4e-07 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = +1 Query: 340 LLPFADLGADSLDTDE 387 L F+ LGADSLDT E Sbjct: 84 LSKFSALGADSLDTVE 99
>ACP1_SPIOL (P07854) Acyl carrier protein 1, chloroplast precursor (Acyl| carrier protein I) (ACP I) Length = 138 Score = 43.1 bits (100), Expect(2) = 2e-05 Identities = 23/45 (51%), Positives = 28/45 (62%) Frame = +2 Query: 212 SFRLQPVPQRFSVCCAAKKETVEKVCDIVKSQLALSDDTEVSGSS 346 SF +R S AAKKET++KVCDIVK +LAL D V+ S Sbjct: 41 SFPTLRTSRRRSFISAAKKETIDKVCDIVKEKLALGADVVVTADS 85 Score = 22.7 bits (47), Expect(2) = 2e-05 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = +1 Query: 349 FADLGADSLDTDE 387 F+ LGADSLDT E Sbjct: 87 FSKLGADSLDTVE 99
>AKR1_KLULA (Q875M2) Palmitoyltransferase AKR1 (EC 2.3.1.-) (Ankyrin| repeat-containing protein AKR1) Length = 752 Score = 32.0 bits (71), Expect = 0.37 Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Frame = +2 Query: 230 VPQR--FSVCCAAKKETVEKVCDIVKSQLALSDDTEVSGSSHLLILVPI 370 VPQR F+VCC ++K+ ++KS L L D S SSHL L I Sbjct: 647 VPQRTCFTVCCTLLG--LDKLVTMIKSVLRLKSDEPSSRSSHLSALARI 693
>MURG_PSYAR (Q4FQV9) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 361 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = -1 Query: 323 HQTAQAGSSQYHKPSLLSPFWLHSKQKISGELAANGRIHCLSL 195 HQTA A + HK ++L P + +++S ELA R CL + Sbjct: 295 HQTANARTLTLHKAAILLPQNELTPKRLSDELALLDRAACLEM 337
>FIN1_SCHPO (O13839) G2-specific protein kinase fin1 (EC 2.7.11.1)| Length = 722 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/54 (29%), Positives = 27/54 (50%) Frame = -1 Query: 350 NGRSQKLQCHQTAQAGSSQYHKPSLLSPFWLHSKQKISGELAANGRIHCLSLEQ 189 N RS ++ A Y PSL SP+ +H+++KI+ E +G + + Q Sbjct: 578 NIRSDEVSKPSKASKTLHGYALPSLASPYDVHAEEKIARENEMDGNFKTMKINQ 631
>ASZ1_PANTR (Q8WMX6) Ankyrin repeat, SAM and basic leucine zipper| domain-containing protein 1 (Germ cell-specific ankyrin, SAM and basic leucine zipper domain-containing protein) Length = 475 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = -3 Query: 336 ETSVSSDSASWLFTISQTFSTVSFLAAQQTENLWGTGCKRKDTLSFLRAEKETELTQIAL 157 E V+S + + Q F++V E+L CK KD + L+ E+E++ T I L Sbjct: 380 ELPVNSQKITLEWASPQNFTSVCEELVNNVEDLSEKVCKLKDLIQKLQNERESDPTHIQL 439
>K1043_HUMAN (Q96AY4) TPR repeat-containing protein KIAA1043| Length = 1716 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = -3 Query: 381 RIQRIGTKISKWEEPETSVSSDSASWLFTISQT 283 R+QR G ++SK PE V + S++ +F S+T Sbjct: 1414 RLQRSGGQVSKSNNPEDGVQAPSSTAVFRASET 1446
>ASNO_BACSU (O05272) Asparagine synthetase [glutamine-hydrolyzing] 3 (EC| 6.3.5.4) Length = 614 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/57 (33%), Positives = 27/57 (47%) Frame = -2 Query: 382 PYPKNRHQDQQMGGARNFSVIRQRKLALHNITNLLYCLLFGCTANRKSLGNWLQTEG 212 PYPK H + G + IR +K ++L+ LL +RK L L+TEG Sbjct: 531 PYPKTHHPEYTKGVSEWLKTIRSQK------DSVLHTLL-----DRKQLDQLLETEG 576
>ASZ1_HUMAN (Q8WWH4) Ankyrin repeat, SAM and basic leucine zipper| domain-containing protein 1 (Germ cell-specific ankyrin, SAM and basic leucine zipper domain-containing protein) Length = 475 Score = 28.5 bits (62), Expect = 4.1 Identities = 18/60 (30%), Positives = 28/60 (46%) Frame = -3 Query: 336 ETSVSSDSASWLFTISQTFSTVSFLAAQQTENLWGTGCKRKDTLSFLRAEKETELTQIAL 157 E V+S + + Q F++V E+L CK KD + L+ E+E + T I L Sbjct: 380 ELPVNSQKITLEWASPQNFTSVCEELVNNVEDLSEKVCKLKDLIQKLQNERENDPTHIQL 439
>Y2375_PSEHT (Q3II24) UPF0168 protein PSHAa2375| Length = 149 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/29 (51%), Positives = 21/29 (72%) Frame = +2 Query: 269 ETVEKVCDIVKSQLALSDDTEVSGSSHLL 355 E VE+V +I+KSQL + + EV SSHL+ Sbjct: 82 EQVEEVVNIIKSQLRATGEREV--SSHLV 108 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,837,124 Number of Sequences: 219361 Number of extensions: 551554 Number of successful extensions: 1894 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 1851 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1893 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 1380984984 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
