ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast15b01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190939.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1038 Score = 200 bits (101), Expect = 3e-48 Identities = 232/276 (84%), Gaps = 6/276 (2%) Strand = Plus / Plus Query: 144 acgaatggggctcctcctggtccaccggcatcaccaaggaccacttcgacgggtccgcct 203 ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||| | Sbjct: 140 acgaatggggctcgtcctggtccaccggcatcaccaaggaacacttcgacggctccgacg 199 Query: 204 ccgccgtcggccgccc------ctccccgtccgcccccgtctccaaggagctggcggccg 257 |||| ||||||||||| |||||||||| || |||||| ||||| ||||||| Sbjct: 200 ccgcggtcggccgcccggtcacctccccgtccaagccggtctcccctgagcttgcggccg 259 Query: 258 tacgcgccatggacgaggaggaagagatcctgcgctccgtggatcgcgacaacaaggaag 317 | || ||||||||||||||||| |||||| | ||| || |||| |||||||||| ||| | Sbjct: 260 tccgggccatggacgaggaggacgagatcttccgcgccatggagcgcgacaacagggagg 319 Query: 318 ggaaggagttcgtggactcgtgggacaagcggtttcaggagacgtgcgagctgctgaagc 377 |||| || |||||||||||||| | | ||| | | ||||||||||||||||||||||| Sbjct: 320 ccaaggcgtacgtggactcgtggggcgaccggatgcgggagacgtgcgagctgctgaagc 379 Query: 378 aggtgcgggagcccggatcccggggctcctacctca 413 ||||||| ||||| || |||||||| |||||||||| Sbjct: 380 aggtgcgcgagccgggctcccggggatcctacctca 415 Score = 79.8 bits (40), Expect = 6e-12 Identities = 57/62 (91%), Gaps = 3/62 (4%) Strand = Plus / Plus Query: 24 tcgccctccgcaaaaccctgctccacggccgcctcc---ccgcgccgccggccaccgccg 80 ||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||| Sbjct: 5 tcgccctccgcaaaaccctcctccacggccgcctccccgccgcgccgccggccgccgccg 64 Query: 81 cc 82 || Sbjct: 65 cc 66
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 200 bits (101), Expect = 3e-48 Identities = 232/276 (84%), Gaps = 6/276 (2%) Strand = Plus / Minus Query: 144 acgaatggggctcctcctggtccaccggcatcaccaaggaccacttcgacgggtccgcct 203 ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||| | Sbjct: 33953194 acgaatggggctcgtcctggtccaccggcatcaccaaggaacacttcgacggctccgacg 33953135 Query: 204 ccgccgtcggccgccc------ctccccgtccgcccccgtctccaaggagctggcggccg 257 |||| ||||||||||| |||||||||| || |||||| ||||| ||||||| Sbjct: 33953134 ccgcggtcggccgcccggtcacctccccgtccaagccggtctcccctgagcttgcggccg 33953075 Query: 258 tacgcgccatggacgaggaggaagagatcctgcgctccgtggatcgcgacaacaaggaag 317 | || ||||||||||||||||| |||||| | ||| || |||| |||||||||| ||| | Sbjct: 33953074 tccgggccatggacgaggaggacgagatcttccgcgccatggagcgcgacaacagggagg 33953015 Query: 318 ggaaggagttcgtggactcgtgggacaagcggtttcaggagacgtgcgagctgctgaagc 377 |||| || |||||||||||||| | | ||| | | ||||||||||||||||||||||| Sbjct: 33953014 ccaaggcgtacgtggactcgtggggcgaccggatgcgggagacgtgcgagctgctgaagc 33952955 Query: 378 aggtgcgggagcccggatcccggggctcctacctca 413 ||||||| ||||| || |||||||| |||||||||| Sbjct: 33952954 aggtgcgcgagccgggctcccggggatcctacctca 33952919 Score = 85.7 bits (43), Expect = 1e-13 Identities = 63/69 (91%), Gaps = 3/69 (4%) Strand = Plus / Minus Query: 17 aaaatgttcgccctccgcaaaaccctgctccacggccgcctcc---ccgcgccgccggcc 73 |||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 33953336 aaaatgctcgccctccgcaaaaccctcctccacggccgcctccccgccgcgccgccggcc 33953277 Query: 74 accgccgcc 82 |||||||| Sbjct: 33953276 gccgccgcc 33953268 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 115236 gccgtctccccgcgccgccggtcaccgccg 115265 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 106762 gccgtctccccgcgccgccggtcaccgccg 106791 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 cggccgcctccccgcgccgcc 69 ||||||||||||||||||||| Sbjct: 4975005 cggccgcctccccgcgccgcc 4974985 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 gtccgcctccgccgtcggccgccc 219 |||||||||||||| ||||||||| Sbjct: 7872770 gtccgcctccgccgccggccgccc 7872793
>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003D09 Length = 161970 Score = 200 bits (101), Expect = 3e-48 Identities = 232/276 (84%), Gaps = 6/276 (2%) Strand = Plus / Minus Query: 144 acgaatggggctcctcctggtccaccggcatcaccaaggaccacttcgacgggtccgcct 203 ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||| | Sbjct: 84637 acgaatggggctcgtcctggtccaccggcatcaccaaggaacacttcgacggctccgacg 84578 Query: 204 ccgccgtcggccgccc------ctccccgtccgcccccgtctccaaggagctggcggccg 257 |||| ||||||||||| |||||||||| || |||||| ||||| ||||||| Sbjct: 84577 ccgcggtcggccgcccggtcacctccccgtccaagccggtctcccctgagcttgcggccg 84518 Query: 258 tacgcgccatggacgaggaggaagagatcctgcgctccgtggatcgcgacaacaaggaag 317 | || ||||||||||||||||| |||||| | ||| || |||| |||||||||| ||| | Sbjct: 84517 tccgggccatggacgaggaggacgagatcttccgcgccatggagcgcgacaacagggagg 84458 Query: 318 ggaaggagttcgtggactcgtgggacaagcggtttcaggagacgtgcgagctgctgaagc 377 |||| || |||||||||||||| | | ||| | | ||||||||||||||||||||||| Sbjct: 84457 ccaaggcgtacgtggactcgtggggcgaccggatgcgggagacgtgcgagctgctgaagc 84398 Query: 378 aggtgcgggagcccggatcccggggctcctacctca 413 ||||||| ||||| || |||||||| |||||||||| Sbjct: 84397 aggtgcgcgagccgggctcccggggatcctacctca 84362 Score = 85.7 bits (43), Expect = 1e-13 Identities = 63/69 (91%), Gaps = 3/69 (4%) Strand = Plus / Minus Query: 17 aaaatgttcgccctccgcaaaaccctgctccacggccgcctcc---ccgcgccgccggcc 73 |||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 84779 aaaatgctcgccctccgcaaaaccctcctccacggccgcctccccgccgcgccgccggcc 84720 Query: 74 accgccgcc 82 |||||||| Sbjct: 84719 gccgccgcc 84711
>dbj|AK073813.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067K14, full insert sequence Length = 1531 Score = 200 bits (101), Expect = 3e-48 Identities = 232/276 (84%), Gaps = 6/276 (2%) Strand = Plus / Plus Query: 144 acgaatggggctcctcctggtccaccggcatcaccaaggaccacttcgacgggtccgcct 203 ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||| | Sbjct: 168 acgaatggggctcgtcctggtccaccggcatcaccaaggaacacttcgacggctccgacg 227 Query: 204 ccgccgtcggccgccc------ctccccgtccgcccccgtctccaaggagctggcggccg 257 |||| ||||||||||| |||||||||| || |||||| ||||| ||||||| Sbjct: 228 ccgcggtcggccgcccggtcacctccccgtccaagccggtctcccctgagcttgcggccg 287 Query: 258 tacgcgccatggacgaggaggaagagatcctgcgctccgtggatcgcgacaacaaggaag 317 | || ||||||||||||||||| |||||| | ||| || |||| |||||||||| ||| | Sbjct: 288 tccgggccatggacgaggaggacgagatcttccgcgccatggagcgcgacaacagggagg 347 Query: 318 ggaaggagttcgtggactcgtgggacaagcggtttcaggagacgtgcgagctgctgaagc 377 |||| || |||||||||||||| | | ||| | | ||||||||||||||||||||||| Sbjct: 348 ccaaggcgtacgtggactcgtggggcgaccggatgcgggagacgtgcgagctgctgaagc 407 Query: 378 aggtgcgggagcccggatcccggggctcctacctca 413 ||||||| ||||| || |||||||| |||||||||| Sbjct: 408 aggtgcgcgagccgggctcccggggatcctacctca 443 Score = 85.7 bits (43), Expect = 1e-13 Identities = 63/69 (91%), Gaps = 3/69 (4%) Strand = Plus / Plus Query: 17 aaaatgttcgccctccgcaaaaccctgctccacggccgcctcc---ccgcgccgccggcc 73 |||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 26 aaaatgctcgccctccgcaaaaccctcctccacggccgcctccccgccgcgccgccggcc 85 Query: 74 accgccgcc 82 |||||||| Sbjct: 86 gccgccgcc 94
>gb|BT016767.1| Zea mays clone Contig600 mRNA sequence Length = 1334 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 144 acgaatggggctcctcctggtccaccggcatcaccaaggaccacttcgacgggtccgcct 203 |||||||| ||||| ||||||| |||||| ||||||||||||| |||||||| ||| | Sbjct: 173 acgaatggagctccacctggtctaccggcctcaccaaggaccatttcgacggatcctcgc 232 Query: 204 ccgccgtcggccg 216 || |||||||||| Sbjct: 233 cctccgtcggccg 245 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 367 gctgctgaagcaggtgcgggagcc 390 |||||||||||||||||||||||| Sbjct: 402 gctgctgaagcaggtgcgggagcc 425
>gb|AY104032.1| Zea mays PCO099184 mRNA sequence Length = 1242 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 144 acgaatggggctcctcctggtccaccggcatcaccaaggaccacttcgacgggtccgcct 203 |||||||| ||||| ||||||| |||||| ||||||||||||| |||||||| ||| | Sbjct: 181 acgaatggagctccacctggtctaccggcctcaccaaggaccatttcgacggatcctcgc 240 Query: 204 ccgccgtcggccg 216 || |||||||||| Sbjct: 241 cctccgtcggccg 253 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 367 gctgctgaagcaggtgcgggagcc 390 |||||||||||||||||||||||| Sbjct: 410 gctgctgaagcaggtgcgggagcc 433
>gb|AC131248.14| Medicago truncatula clone mth2-28n22, complete sequence Length = 136333 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 155 tcctcctggtccaccggcatcaccaaggaccacttcgacgg 195 |||||||||||||||||| | ||||| ||||||||| |||| Sbjct: 53965 tcctcctggtccaccggcttaaccaaagaccacttcaacgg 53925
>gb|AF520763.1| Homo sapiens fibroblast growth factor 8 (androgen-induced) (FGF8) gene, complete cds Length = 9714 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 207 ccgtcggccgcccctccccgtccgcccc 234 |||||||||||||||||||| ||||||| Sbjct: 1666 ccgtcggccgcccctccccggccgcccc 1693
>gb|AC010789.9|AC010789 Homo sapiens chromosome 10, clone RP11-190J1, complete sequence Length = 203842 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 207 ccgtcggccgcccctccccgtccgcccc 234 |||||||||||||||||||| ||||||| Sbjct: 105022 ccgtcggccgcccctccccggccgcccc 104995
>gb|AF079325.1|AF079325 Homo sapiens nucleophosmin/nucleoplasmin3 (NPM3) gene, complete cds and FGF8 gene exon 1 Length = 8510 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 207 ccgtcggccgcccctccccgtccgcccc 234 |||||||||||||||||||| ||||||| Sbjct: 7983 ccgtcggccgcccctccccggccgcccc 8010
>ref|XM_868696.1| PREDICTED: Bos taurus similar to ferritin, heavy polypeptide 1 (LOC512594), partial mRNA Length = 833 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 62 gcgccgccggccaccgccgcctc 84 ||||||||||||||||||||||| Sbjct: 109 gcgccgccggccaccgccgcctc 131
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Minus Query: 65 ccgccggccaccgccgcctccag 87 ||||||||||||||||||||||| Sbjct: 2862149 ccgccggccaccgccgcctccag 2862127
>ref|XM_549815.1| Oryza sativa (japonica cultivar-group), mRNA Length = 306 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 59 gccgtctccccgcgccgccggtcaccgccg 30
>ref|XM_549816.1| Oryza sativa (japonica cultivar-group), mRNA Length = 306 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 59 gccgtctccccgcgccgccggtcaccgccg 30
>ref|XM_481771.1| Oryza sativa (japonica cultivar-group), mRNA Length = 573 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 59 gccgtctccccgcgccgccggtcaccgccg 30
>ref|NM_195242.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0009C07.15), mRNA Length = 303 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 59 gccgtctccccgcgccgccggtcaccgccg 30
>ref|NM_195240.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0009C07.18), mRNA Length = 303 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 59 gccgtctccccgcgccgccggtcaccgccg 30
>ref|NM_196619.1| Oryza sativa (japonica cultivar-group) putative reverse transcriptase (OSJNBa0073D04.31), mRNA Length = 1320 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 197 tccgcctccgccgtcggccgcc 218 |||||||||||||||||||||| Sbjct: 439 tccgcctccgccgtcggccgcc 460
>ref|XM_468641.1| Oryza sativa (japonica cultivar-group), mRNA Length = 306 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 59 gccgtctccccgcgccgccggtcaccgccg 30
>gb|AC105744.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0009C07, complete sequence Length = 124266 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 92076 gccgtctccccgcgccgccggtcaccgccg 92047 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 83700 gccgtctccccgcgccgccggtcaccgccg 83671
>gb|AC092262.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C05 map C12819S, complete sequence Length = 113266 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 39401 gccgtctccccgcgccgccggtcaccgccg 39372 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 30929 gccgtctccccgcgccgccggtcaccgccg 30900
>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01, complete sequence Length = 146432 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 123208 gccgtctccccgcgccgccggtcaccgccg 123237 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 120118 gccgtctccccgcgccgccggtcaccgccg 120147 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 111649 gccgtctccccgcgccgccggtcaccgccg 111678
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 142144 gccgtctccccgcgccgccggtcaccgccg 142173 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 133672 gccgtctccccgcgccgccggtcaccgccg 133701
>gb|AE009163.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 189 of 256 of the complete sequence Length = 10470 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 cgccgccggccaccgccgcctc 84 |||||||||||||||||||||| Sbjct: 10044 cgccgccggccaccgccgcctc 10065
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 55 cctccccgcgccgccggccaccgccgcctc 84 ||||| ||||||||||||| |||||||||| Sbjct: 31107064 cctcctcgcgccgccggccgccgccgcctc 31107093 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 16801551 gccgtctccccgcgccgccggtcaccgccg 16801522 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 16793079 gccgtctccccgcgccgccggtcaccgccg 16793050
>emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019J05, complete sequence Length = 185211 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 68992 gccgtctccccgcgccgccggtcaccgccg 68963 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 60481 gccgtctccccgcgccgccggtcaccgccg 60452
>emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060D06, complete sequence Length = 151506 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 97067 gccgtctccccgcgccgccggtcaccgccg 97096 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 93470 gccgtctccccgcgccgccggtcaccgccg 93499 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 85014 gccgtctccccgcgccgccggtcaccgccg 85043
>gb|AC144743.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0009H09, complete sequence Length = 148740 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 16839 gccgtctccccgcgccgccggtcaccgccg 16868 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 13749 gccgtctccccgcgccgccggtcaccgccg 13778 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 5280 gccgtctccccgcgccgccggtcaccgccg 5309
>gb|AC087542.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0073D04, complete sequence Length = 155372 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 tccgcctccgccgtcggccgcc 218 |||||||||||||||||||||| Sbjct: 103488 tccgcctccgccgtcggccgcc 103467
>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete sequence Length = 128017 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 55 cctccccgcgccgccggccaccgccgcctc 84 ||||| ||||||||||||| |||||||||| Sbjct: 27705 cctcctcgcgccgccggccgccgccgcctc 27734
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 cgccgccggccaccgccgcctc 84 |||||||||||||||||||||| Sbjct: 2101010 cgccgccggccaccgccgcctc 2101031
>gb|AC091749.8| Oryza sativa chromosome 10 BAC OSJNBb0008A05 genomic sequence, complete sequence Length = 150465 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 27867 gccgtctccccgcgccgccggtcaccgccg 27896 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 19366 gccgtctccccgcgccgccggtcaccgccg 19395
>gb|AC090054.2|AC090054 Oryza sativa chromosome 9 clone PAC0645D04, complete sequence Length = 139050 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 52155 gccgtctccccgcgccgccggtcaccgccg 52184
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 33324806 gccgtctccccgcgccgccggtcaccgccg 33324835 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 33321209 gccgtctccccgcgccgccggtcaccgccg 33321238 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 33312753 gccgtctccccgcgccgccggtcaccgccg 33312782 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 12244111 gccgtctccccgcgccgccggtcaccgccg 12244082 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 12235600 gccgtctccccgcgccgccggtcaccgccg 12235571 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 gcgccgccggccaccgccgc 81 |||||||||||||||||||| Sbjct: 18917832 gcgccgccggccaccgccgc 18917851 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 cgcgccgccggccaccgccgcctc 84 ||||| |||||||||||||||||| Sbjct: 10071446 cgcgcggccggccaccgccgcctc 10071469 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 307524 cgccgccggccaccgccgcc 307505
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 18275918 gccgtctccccgcgccgccggtcaccgccg 18275947 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 tccgcctccgccgtcggccgcc 218 |||||||||||||||||||||| Sbjct: 14109378 tccgcctccgccgtcggccgcc 14109357 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 11506499 gccgtctccccgcgccgccggtcaccgccg 11506528 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 11498057 gccgtctccccgcgccgccggtcaccgccg 11498086 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 24249107 cgccgccggccaccgccgcc 24249126 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 195 ggtccgcctccgccgtcggccgcc 218 ||||| |||||||||||||||||| Sbjct: 3819887 ggtccacctccgccgtcggccgcc 3819864
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 tccgcctccgccgtcggccgcc 218 |||||||||||||||||||||| Sbjct: 14778339 tccgcctccgccgtcggccgcc 14778318 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 8772795 gccgtctccccgcgccgccggtcaccgccg 8772824 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 8764294 gccgtctccccgcgccgccggtcaccgccg 8764323 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 5697699 gccgtctccccgcgccgccggtcaccgccg 5697728 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 5689323 gccgtctccccgcgccgccggtcaccgccg 5689352 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 tccgcctccgccgtcggccgc 217 ||||||||||||||||||||| Sbjct: 15186821 tccgcctccgccgtcggccgc 15186801
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 5953500 gccgtctccccgcgccgccggtcaccgccg 5953529 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 5944992 gccgtctccccgcgccgccggtcaccgccg 5945021
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 15407851 gccgtctccccgcgccgccggtcaccgccg 15407822 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 15399330 gccgtctccccgcgccgccggtcaccgccg 15399301 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 ctgctccacggccgcctcccc 61 ||||||||||||||||||||| Sbjct: 16163777 ctgctccacggccgcctcccc 16163797 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 ctgctccacggccgcctcccc 61 ||||||||||||||||||||| Sbjct: 16089751 ctgctccacggccgcctcccc 16089771 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 ccgccggccaccgccgcctc 84 |||||||||||||||||||| Sbjct: 12403420 ccgccggccaccgccgcctc 12403439 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 8379104 cgccgccggccaccgccgcc 8379085
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 cgccgccggccaccgccgcctc 84 |||||||||||||||||||||| Sbjct: 28432408 cgccgccggccaccgccgcctc 28432387 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 10795256 gccgtctccccgcgccgccggtcaccgccg 10795285 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 10786737 gccgtctccccgcgccgccggtcaccgccg 10786766 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 3622254 gccgtctccccgcgccgccggtcaccgccg 3622225 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 3613745 gccgtctccccgcgccgccggtcaccgccg 3613716 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 26459738 cgccgccggccaccgccgcc 26459719
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 24073655 gccgtctccccgcgccgccggtcaccgccg 24073684 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 24065183 gccgtctccccgcgccgccggtcaccgccg 24065212 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 23191433 gccgtctccccgcgccgccggtcaccgccg 23191462 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 23188343 gccgtctccccgcgccgccggtcaccgccg 23188372 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 23179874 gccgtctccccgcgccgccggtcaccgccg 23179903 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 56 ctccccgcgccgccggccaccgccg 80 |||||||||||||||| |||||||| Sbjct: 9511598 ctccccgcgccgccggtcaccgccg 9511574 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 53 cgcctccccgcgccgccggccaccg 77 |||| |||||||||||||||||||| Sbjct: 7313490 cgccgccccgcgccgccggccaccg 7313514 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 tccgcctccgccgtcggccg 216 |||||||||||||||||||| Sbjct: 22525693 tccgcctccgccgtcggccg 22525674 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 22074395 cgccgccggccaccgccgcc 22074376
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 55 cctccccgcgccgccggccaccgccgcctc 84 ||||| ||||||||||||| |||||||||| Sbjct: 31197587 cctcctcgcgccgccggccgccgccgcctc 31197616 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 16795184 gccgtctccccgcgccgccggtcaccgccg 16795155 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 16786712 gccgtctccccgcgccgccggtcaccgccg 16786683
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 30268505 gccgtctccccgcgccgccggtcaccgccg 30268534 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 30259933 gccgtctccccgcgccgccggtcaccgccg 30259962 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 29068865 gccgtctccccgcgccgccggtcaccgccg 29068894 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 29060393 gccgtctccccgcgccgccggtcaccgccg 29060422 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 1214074 cgccgccggccaccgccgcc 1214093
>dbj|AP006528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0651G05 Length = 153258 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 144987 gccgtctccccgcgccgccggtcaccgccg 145016 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 136479 gccgtctccccgcgccgccggtcaccgccg 136508
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 cgccgccggccaccgccgcctc 84 |||||||||||||||||||||| Sbjct: 144986 cgccgccggccaccgccgcctc 144965
>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0014B15 Length = 158821 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 16482 gccgtctccccgcgccgccggtcaccgccg 16453 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 7973 gccgtctccccgcgccgccggtcaccgccg 7944
>dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0675A05 Length = 131972 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 114091 gccgtctccccgcgccgccggtcaccgccg 114062 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 105582 gccgtctccccgcgccgccggtcaccgccg 105553
>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0532H03 Length = 166128 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 cgccgccggccaccgccgcctc 84 |||||||||||||||||||||| Sbjct: 39441 cgccgccggccaccgccgcctc 39420
>dbj|AP003522.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036B02 Length = 168253 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 148319 gccgtctccccgcgccgccggtcaccgccg 148348 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 139800 gccgtctccccgcgccgccggtcaccgccg 139829
>dbj|AP005413.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0055N24 Length = 142702 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 21622 gccgtctccccgcgccgccggtcaccgccg 21651 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 13103 gccgtctccccgcgccgccggtcaccgccg 13132
>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672D08 Length = 173729 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 113038 gccgtctccccgcgccgccggtcaccgccg 113067 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 104564 gccgtctccccgcgccgccggtcaccgccg 104593
>dbj|AP006727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0645D04 Length = 142890 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 64431 gccgtctccccgcgccgccggtcaccgccg 64460 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 55923 gccgtctccccgcgccgccggtcaccgccg 55952
>dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1121A12 Length = 138796 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 69422 gccgtctccccgcgccgccggtcaccgccg 69451 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 60850 gccgtctccccgcgccgccggtcaccgccg 60879
>dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0724B10 Length = 169143 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 115030 gccgtctccccgcgccgccggtcaccgccg 115059 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 106558 gccgtctccccgcgccgccggtcaccgccg 106587
>dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1790_D02 Length = 162928 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 93427 gccgtctccccgcgccgccggtcaccgccg 93398 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 84906 gccgtctccccgcgccgccggtcaccgccg 84877
>dbj|AK068150.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129N20, full insert sequence Length = 3687 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 cgccgccggccaccgccgcctc 84 |||||||||||||||||||||| Sbjct: 84 cgccgccggccaccgccgcctc 105
>dbj|AK063449.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-F10, full insert sequence Length = 2080 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 55 cctccccgcgccgccggccaccgccgcctc 84 ||||| ||||||||||||| |||||||||| Sbjct: 103 cctcctcgcgccgccggccgccgccgcctc 132
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 tccgcctccgccgtcggccgcc 218 |||||||||||||||||||||| Sbjct: 14786580 tccgcctccgccgtcggccgcc 14786559 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 8777934 gccgtctccccgcgccgccggtcaccgccg 8777963 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 8769433 gccgtctccccgcgccgccggtcaccgccg 8769462 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 5698886 gccgtctccccgcgccgccggtcaccgccg 5698915 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 5690510 gccgtctccccgcgccgccggtcaccgccg 5690539 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 tccgcctccgccgtcggccgc 217 ||||||||||||||||||||| Sbjct: 15195062 tccgcctccgccgtcggccgc 15195042
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 18202239 gccgtctccccgcgccgccggtcaccgccg 18202268 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 tccgcctccgccgtcggccgcc 218 |||||||||||||||||||||| Sbjct: 14063658 tccgcctccgccgtcggccgcc 14063637 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 11506170 gccgtctccccgcgccgccggtcaccgccg 11506199 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 11497728 gccgtctccccgcgccgccggtcaccgccg 11497757 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 24177313 cgccgccggccaccgccgcc 24177332 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 195 ggtccgcctccgccgtcggccgcc 218 ||||| |||||||||||||||||| Sbjct: 3819861 ggtccacctccgccgtcggccgcc 3819838
>emb|AL732650.5|CNS08C9P Oryza sativa chromosome 12, . BAC OSJNBa0054O08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 167806 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 38907 gccgtctccccgcgccgccggtcaccgccg 38878 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 30465 gccgtctccccgcgccgccggtcaccgccg 30436
>emb|AL831799.3|CNS08CAC Oryza sativa chromosome 12, . BAC OSJNBa0087A02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 177034 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 95076 gccgtctccccgcgccgccggtcaccgccg 95047
>emb|AL732644.3|CNS08C9J Oryza sativa chromosome 12, . BAC OSJNBa0016A01 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 150703 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 tccgcctccgccgtcggccgcc 218 |||||||||||||||||||||| Sbjct: 35919 tccgcctccgccgtcggccgcc 35898
>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455C04 Length = 147940 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 63782 gccgtctccccgcgccgccggtcaccgccg 63811 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 55308 gccgtctccccgcgccgccggtcaccgccg 55337
>dbj|AP003610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0402A09 Length = 141966 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 100166 gccgtctccccgcgccgccggtcaccgccg 100195 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccgcctccccgcgccgccggccaccgccg 80 |||| |||||||||||||||| |||||||| Sbjct: 91692 gccgtctccccgcgccgccggtcaccgccg 91721
>ref|NM_031475.1| Homo sapiens espin (ESPN), mRNA Length = 3542 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 153 gctcctcctggtccaccggcatcaccaag 181 ||||||||| ||||||||||| ||||||| Sbjct: 2063 gctcctcctcgtccaccggcagcaccaag 2091
>gb|AC135916.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0088M06, from chromosome 5, complete sequence Length = 150099 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 56 ctccccgcgccgccggccaccgccg 80 |||||||||||||||| |||||||| Sbjct: 20281 ctccccgcgccgccggtcaccgccg 20257
>gb|AC135422.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0043H23, complete sequence Length = 134097 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 53 cgcctccccgcgccgccggccaccg 77 |||| |||||||||||||||||||| Sbjct: 16267 cgccgccccgcgccgccggccaccg 16291
>gb|AC146716.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1003C08, complete sequence Length = 152527 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 53 cgcctccccgcgccgccggccaccg 77 |||| |||||||||||||||||||| Sbjct: 51745 cgccgccccgcgccgccggccaccg 51769
>gb|AC133648.3| Mus musculus BAC clone RP23-291B1 from chromosome 7, complete sequence Length = 207234 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 213 gccgcccctccccgtccgcccccgt 237 ||||||||||||| ||||||||||| Sbjct: 128787 gccgcccctccccctccgcccccgt 128763
>gb|AY203958.1| Homo sapiens LP2654 mRNA, complete cds Length = 1363 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 153 gctcctcctggtccaccggcatcaccaag 181 ||||||||| ||||||||||| ||||||| Sbjct: 417 gctcctcctcgtccaccggcagcaccaag 445
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 cgtctccaaggagctggcggc 255 ||||||||||||||||||||| Sbjct: 2495769 cgtctccaaggagctggcggc 2495789
>emb|AL136880.1|HSM801848 Homo sapiens mRNA; cDNA DKFZp434A196 (from clone DKFZp434A196) Length = 3542 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 153 gctcctcctggtccaccggcatcaccaag 181 ||||||||| ||||||||||| ||||||| Sbjct: 2063 gctcctcctcgtccaccggcagcaccaag 2091
>emb|AJ575642.1|BAM575642 Bacillus amyloliquefaciens yciC gene, yx01 gene, yckc gene, yckD gene, yckE gene, nin gene, nuc gene, hxlB gene, hxlA gene, hxlR gene, xy02 gene, srfAA gene, srfAB gene, comS gene, srfAC gene, srfAD gene, aat gene, ycxc gene, ycxD gene, sfp gene, yczE gene, yckI gene and yckJ gene Length = 41884 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 67 gccggccaccgccgcctccaggatc 91 ||||||| ||||||||||||||||| Sbjct: 35509 gccggcctccgccgcctccaggatc 35485
>gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0016G17, complete sequence Length = 141041 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 tccgcctccgccgtcggccgc 217 ||||||||||||||||||||| Sbjct: 40520 tccgcctccgccgtcggccgc 40500
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 72 ccaccgccgcctccaggatctcctc 96 ||||||||||||||| ||||||||| Sbjct: 12828035 ccaccgccgcctccacgatctcctc 12828011 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 24567617 cgccgccggccaccgccgcc 24567636 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 cgccggccaccgccgcctcc 85 |||||||||||||||||||| Sbjct: 8099393 cgccggccaccgccgcctcc 8099374 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 cgccggccaccgccgcctcc 85 |||||||||||||||||||| Sbjct: 3353401 cgccggccaccgccgcctcc 3353420
>gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0040I11, complete sequence Length = 129420 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 tccgcctccgccgtcggccgc 217 ||||||||||||||||||||| Sbjct: 95434 tccgcctccgccgtcggccgc 95414
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 gcgagctgctgaagcaggtgc 383 ||||||||||||||||||||| Sbjct: 1259376 gcgagctgctgaagcaggtgc 1259356 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 ccccgcgccgccggccaccgccgc 81 |||||||||| ||||||||||||| Sbjct: 1916724 ccccgcgccggcggccaccgccgc 1916747
>dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671B11 Length = 168372 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 cggccgcctccccgcgccgcc 69 ||||||||||||||||||||| Sbjct: 75458 cggccgcctccccgcgccgcc 75438
>dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0710F09 Length = 198867 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 72 ccaccgccgcctccaggatctcctc 96 ||||||||||||||| ||||||||| Sbjct: 86159 ccaccgccgcctccacgatctcctc 86135
>dbj|AP005726.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0028A18 Length = 151080 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 ctgctccacggccgcctcccc 61 ||||||||||||||||||||| Sbjct: 101857 ctgctccacggccgcctcccc 101877 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 ctgctccacggccgcctcccc 61 ||||||||||||||||||||| Sbjct: 27831 ctgctccacggccgcctcccc 27851
>gb|AY105414.1| Zea mays PCO079032 mRNA sequence Length = 2077 Score = 42.1 bits (21), Expect = 1.4 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 59 cccgcgccgccggccaccgccgcctccag 87 |||||||| |||||||||||||||||||| Sbjct: 320 cccgcgcc-ccggccaccgccgcctccag 293
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 ccgcctccgccgtcggccgcc 218 ||||||||||||||||||||| Sbjct: 2178131 ccgcctccgccgtcggccgcc 2178151
>gb|AC147720.1| Gallus gallus BAC clone CH261-46I14 from chromosome unknown, complete sequence Length = 204711 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 49 cggccgcctccccgcgccgccggcc 73 ||||||||||||| ||||||||||| Sbjct: 28963 cggccgcctccccccgccgccggcc 28939
>ref|XM_481428.1| Oryza sativa (japonica cultivar-group), mRNA Length = 537 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 ccgccggccaccgccgcctc 84 |||||||||||||||||||| Sbjct: 452 ccgccggccaccgccgcctc 471
>ref|XM_470970.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1065 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 415 cgccgccggccaccgccgcc 396
>ref|XM_526885.1| PREDICTED: Pan troglodytes similar to zinc finger, BED domain containing 3; hypothetical protein MGC15435; 2610005H11Rik (LOC471507), mRNA Length = 474 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 ccctgctccacggccgcctc 58 |||||||||||||||||||| Sbjct: 248 ccctgctccacggccgcctc 229
>ref|XM_479065.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3665 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 135 cgccgccggccaccgccgcc 154
>ref|XM_477241.1| Oryza sativa (japonica cultivar-group), mRNA Length = 864 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 cgccggccaccgccgcctcc 85 |||||||||||||||||||| Sbjct: 403 cgccggccaccgccgcctcc 384
>ref|NM_186415.1| Oryza sativa (japonica cultivar-group), mRNA Length = 858 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 cgccggccaccgccgcctcc 85 |||||||||||||||||||| Sbjct: 742 cgccggccaccgccgcctcc 723
>ref|XM_472267.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1188 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 gcgccgccggccaccgccgc 81 |||||||||||||||||||| Sbjct: 128 gcgccgccggccaccgccgc 109
>gb|AY360393.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0096K16, complete sequence Length = 164501 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 ccgccggccaccgccgcctc 84 |||||||||||||||||||| Sbjct: 72735 ccgccggccaccgccgcctc 72754
>gb|AY023104.1| Oryza sativa microsatellite MRG5429 containing (GAG)X9, genomic sequence Length = 227 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 101 cgccgccggccaccgccgcc 82
>gb|AC148880.2| Chlamydomonas reinhardtii clone cr-40F11, complete sequence Length = 56458 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 cccgcgccgccggccaccgccgcctcca 86 ||||||||||||||| ||||| |||||| Sbjct: 23866 cccgcgccgccggccgccgcctcctcca 23893
>gb|AC093919.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_D01, complete sequence Length = 112761 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 28376 cgccgccggccaccgccgcc 28357
>gb|AC108876.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1525_A02, complete sequence Length = 93826 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 tccgcctccgccgtcggccg 216 |||||||||||||||||||| Sbjct: 20743 tccgcctccgccgtcggccg 20724
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05, complete sequence Length = 163130 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 tccgcctccgccgtcggccg 216 |||||||||||||||||||| Sbjct: 115100 tccgcctccgccgtcggccg 115081
>ref|XM_991594.1| PREDICTED: Mus musculus RIKEN cDNA 6330417G02 gene (6330417G02Rik), mRNA Length = 3678 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 gctgaagcaggtgcgggagc 389 |||||||||||||||||||| Sbjct: 1515 gctgaagcaggtgcgggagc 1534
>ref|XM_916631.2| PREDICTED: Mus musculus RIKEN cDNA 6330417G02 gene (6330417G02Rik), mRNA Length = 2889 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 gctgaagcaggtgcgggagc 389 |||||||||||||||||||| Sbjct: 540 gctgaagcaggtgcgggagc 559
>ref|XM_355952.4| PREDICTED: Mus musculus RIKEN cDNA 6330417G02 gene (6330417G02Rik), mRNA Length = 2016 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 gctgaagcaggtgcgggagc 389 |||||||||||||||||||| Sbjct: 576 gctgaagcaggtgcgggagc 595
>gb|AC130550.4| Mus musculus BAC clone RP24-463N15 from chromosome 7, complete sequence Length = 152908 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 gctgaagcaggtgcgggagc 389 |||||||||||||||||||| Sbjct: 132729 gctgaagcaggtgcgggagc 132748
>gb|AC125187.4| Mus musculus BAC clone RP23-302N11 from chromosome 7, complete sequence Length = 247402 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 95 tcattcctccgctccctctgcacatctc 122 |||||||||| |||||||||||||||| Sbjct: 102884 tcattcctccattccctctgcacatctc 102857
>emb|Z97634.26|HS367G8 Human DNA sequence from clone LA16c-367G8 on chromosome 16 Contains the MRPL28 gene for mitochondrial ribosomal protein L28, the TMEM8 gene for transmembrane protein 8 (five membrane-spanning domains), a novel gene, a ribosomal protein L23a (RPL23A) pseudogene, the NME4 gene for non-metastatic cells 4 protein expressed in and six CpG islands, complete sequence Length = 34971 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 cccgcgccgccggccaccgccgcc 82 ||||||||||||||| |||||||| Sbjct: 15975 cccgcgccgccggcccccgccgcc 15998
>emb|AL354740.29| Human DNA sequence from clone RP11-513I15 on chromosome 6 Contains the 5' end of the GRM4 gene for glutamate receptor metabotropic 4, keratin 18 pseudogene 1 (KRT18P1), a cytochrome c, somatic (CYCS) pseudogene, the HMGA1 gene for high mobility group AT-hook 1, a ribosomal protein L35 (RPL35) pseudogene, part of a novel gene and CpG islands, complete sequence Length = 151828 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 55 cctccccgcgccgccggccaccgccgcc 82 ||||||||||||||||| | |||||||| Sbjct: 104857 cctccccgcgccgccgggccccgccgcc 104830
>emb|AL110115.38|HSJ324O17 Human DNA sequence from clone RP3-324O17 on chromosome 20 Contains the 5' end of the ID1 gene for inhibitor of DNA binding 1, dominant negative helix-loop-helix protein, two novel genes, the 3' end of the HM13 gene for histocompatibility (minor) 13 an MCT-1 (multiple copies in a T-cell malignancies) pseudogene and five CpG islands, complete sequence Length = 79419 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 ggccgcctccccgcgccgcc 69 |||||||||||||||||||| Sbjct: 46799 ggccgcctccccgcgccgcc 46818
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 cggccgcctccccgcgccgccggc 72 ||||||||||||||||| |||||| Sbjct: 153922 cggccgcctccccgcgcggccggc 153899
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ccgcgccgccggccaccgcc 79 |||||||||||||||||||| Sbjct: 149840 ccgcgccgccggccaccgcc 149859
>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29 Length = 291000 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ccacggccgcctccccgcgc 65 |||||||||||||||||||| Sbjct: 211616 ccacggccgcctccccgcgc 211597
>emb|AL731619.3|OSJN00267 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084N21, complete sequence Length = 143093 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 gcgccgccggccaccgccgc 81 |||||||||||||||||||| Sbjct: 133742 gcgccgccggccaccgccgc 133761
>emb|AL731601.3|OSJN00245 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044M19, complete sequence Length = 188317 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 gcgccgccggccaccgccgc 81 |||||||||||||||||||| Sbjct: 9754 gcgccgccggccaccgccgc 9773
>emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0094O15, complete sequence Length = 144778 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 103344 cgccgccggccaccgccgcc 103325
>emb|AL607007.3|OSJN00118 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0018J12, complete sequence Length = 120004 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 cgcgccgccggccaccgccgcctc 84 ||||| |||||||||||||||||| Sbjct: 51930 cgcgcggccggccaccgccgcctc 51953
>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome Length = 156789 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 cgcctccgccgtcggccgcc 218 |||||||||||||||||||| Sbjct: 143656 cgcctccgccgtcggccgcc 143675
>gb|AE006463.1| Homo sapiens 16p13.3 sequence section 2 of 8 Length = 260418 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 cccgcgccgccggccaccgccgcc 82 ||||||||||||||| |||||||| Sbjct: 114451 cccgcgccgccggcccccgccgcc 114474
>dbj|AK220482.1| Mus musculus mRNA for mKIAA4091 protein Length = 5967 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 gctgaagcaggtgcgggagc 389 |||||||||||||||||||| Sbjct: 327 gctgaagcaggtgcgggagc 346
>gb|AC126794.15| Medicago truncatula clone mth2-24j7, complete sequence Length = 129513 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gacgtgcgagctgctgaagc 377 |||||||||||||||||||| Sbjct: 121382 gacgtgcgagctgctgaagc 121401
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 gccaccgccgcctccaggatctcc 94 ||||||||| |||||||||||||| Sbjct: 800196 gccaccgccacctccaggatctcc 800219
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 gccgccggccaccgccgcct 83 |||||||||||||||||||| Sbjct: 3680543 gccgccggccaccgccgcct 3680524
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 cgcgccgccggccaccgccg 80 |||||||||||||||||||| Sbjct: 2687506 cgcgccgccggccaccgccg 2687487 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 cgccggccaccgccgcctcc 85 |||||||||||||||||||| Sbjct: 233402 cgccggccaccgccgcctcc 233383
>dbj|AK018189.2| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330417G02 product:hypothetical protein, full insert sequence Length = 1492 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 gctgaagcaggtgcgggagc 389 |||||||||||||||||||| Sbjct: 349 gctgaagcaggtgcgggagc 368
>ref|NM_021259.1| Homo sapiens transmembrane protein 8 (five membrane-spanning domains) (TMEM8), mRNA Length = 2561 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 cccgcgccgccggccaccgccgcc 82 ||||||||||||||| |||||||| Sbjct: 50 cccgcgccgccggcccccgccgcc 27
>dbj|AK223624.1| Homo sapiens mRNA for zinc finger, BED domain containing 3 variant, clone: FCC134F04 Length = 1031 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 ccctgctccacggccgcctc 58 |||||||||||||||||||| Sbjct: 740 ccctgctccacggccgcctc 721
>dbj|AB074432.1| Cercopithecine herpesvirus 1 US1, US2, US3, US4, US5, US6, US7, US8, US8.5, US9, US10, US11, US12 genes, complete and partial cds Length = 14447 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 cgcctccgccgtcggccgcc 218 |||||||||||||||||||| Sbjct: 9553 cgcctccgccgtcggccgcc 9572
>dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1066G12 Length = 136263 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 gtccgcctccgccgtcggccgccc 219 |||||||||||||| ||||||||| Sbjct: 67716 gtccgcctccgccgccggccgccc 67739
>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0575F10 Length = 150462 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 45165 cgccgccggccaccgccgcc 45184
>dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0709F06 Length = 170964 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 71777 cgccgccggccaccgccgcc 71758
>dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0039M16 Length = 133229 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 23684 cgccgccggccaccgccgcc 23703
>dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_C08 Length = 117923 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 cgccggccaccgccgcctcc 85 |||||||||||||||||||| Sbjct: 33165 cgccggccaccgccgcctcc 33146
>dbj|AP004041.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1115_A07 Length = 165126 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 ccgccggccaccgccgcctc 84 |||||||||||||||||||| Sbjct: 7449 ccgccggccaccgccgcctc 7468
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 119213 cgccgccggccaccgccgcc 119194
>dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018H10 Length = 135879 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 60911 cgccgccggccaccgccgcc 60930
>dbj|AK110147.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-161-E01, full insert sequence Length = 3748 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 ccgccgcctccaggatctcctcat 98 |||||||||||||| ||||||||| Sbjct: 770 ccgccgcctccaggctctcctcat 747
>dbj|AK104063.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-C09, full insert sequence Length = 1628 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 72 cgccgccggccaccgccgcc 91
>dbj|AK102589.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098F13, full insert sequence Length = 916 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 56 cgccgccggccaccgccgcc 75
>dbj|AK100000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134N21, full insert sequence Length = 3666 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 135 cgccgccggccaccgccgcc 154
>gb|L17131.1|HUMHMGIY Homo sapiens high mobility group protein (HMG-I(Y)) gene exons 1-8, complete cds Length = 10144 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 55 cctccccgcgccgccggccaccgccgcc 82 ||||||||||||||||| | |||||||| Sbjct: 1271 cctccccgcgccgccgggccccgccgcc 1244
>dbj|AK069960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037K22, full insert sequence Length = 1233 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 425 cgccgccggccaccgccgcc 406
>dbj|AK069695.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026O17, full insert sequence Length = 1602 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 78 cgccgccggccaccgccgcc 97
>dbj|AK065876.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047J07, full insert sequence Length = 3499 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 69 cgccgccggccaccgccgcc 88
>dbj|AK064665.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-B07, full insert sequence Length = 1424 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 68 cgccgccggccaccgccgcc 87
>dbj|AK063393.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-H05, full insert sequence Length = 1312 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 77 cgccgccggccaccgccgcc 96
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 cgccggccaccgccgcctcc 85 |||||||||||||||||||| Sbjct: 163094 cgccggccaccgccgcctcc 163113
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 cgccgccggccaccgccgcctcca 86 ||||||||||||||||| |||||| Sbjct: 4267047 cgccgccggccaccgccacctcca 4267070
>emb|AL772427.4|CNS08CA5 Oryza sativa chromosome 12, . BAC OJ1260_B01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135793 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgccgccggccaccgccgcc 82 |||||||||||||||||||| Sbjct: 25881 cgccgccggccaccgccgcc 25900
>emb|AL732638.6|CNS08C9D Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0010K22 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 92728 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 ggtccgcctccgccgtcggccgcc 218 ||||| |||||||||||||||||| Sbjct: 20158 ggtccacctccgccgtcggccgcc 20181
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 ccgccggccaccgccgcctc 84 |||||||||||||||||||| Sbjct: 1242236 ccgccggccaccgccgcctc 1242255 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 tccccgcgccgccggccaccgccg 80 ||||||| |||||||||||||||| Sbjct: 934482 tccccgctccgccggccaccgccg 934505 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 cgccgccggccaccgccgcctcca 86 ||||||||| |||||||||||||| Sbjct: 189949 cgccgccgggcaccgccgcctcca 189926
>emb|AL805950.11| Mouse DNA sequence from clone RP23-134I15 on chromosome 2, complete sequence Length = 237337 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ccgcccctccccgtccgccc 233 |||||||||||||||||||| Sbjct: 177140 ccgcccctccccgtccgccc 177121
>dbj|AB045292.1| Homo sapiens mRNA for M83 protein, complete cds Length = 2561 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 cccgcgccgccggccaccgccgcc 82 ||||||||||||||| |||||||| Sbjct: 50 cccgcgccgccggcccccgccgcc 27 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,343,077 Number of Sequences: 3902068 Number of extensions: 3343077 Number of successful extensions: 89917 Number of sequences better than 10.0: 146 Number of HSP's better than 10.0 without gapping: 173 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85390 Number of HSP's gapped (non-prelim): 4523 length of query: 414 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 392 effective length of database: 17,147,199,772 effective search space: 6721702310624 effective search space used: 6721702310624 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
