ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast14g08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_480435.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3294 Score = 353 bits (178), Expect = 3e-94 Identities = 238/258 (92%) Strand = Plus / Plus Query: 4 cagaacaagaggacccaaatgaagaaccagcacgagaggcacgagaactcgcagctgagg 63 ||||||||| | || || |||||||||||||||||||||||||||||| |||||||| || Sbjct: 884 cagaacaagcgcacacagatgaagaaccagcacgagaggcacgagaacgcgcagctgcgg 943 Query: 64 gcggacaacgacaagctgcgggcggagaacatgcgctacaaggaggcgctcagcagcgcg 123 ||||| |||||||||||||| |||||||||||||| ||||||||||| || ||||||||| Sbjct: 944 gcggagaacgacaagctgcgcgcggagaacatgcgatacaaggaggccctgagcagcgcg 1003 Query: 124 tcatgccccaactgcggcggcccggcggcgctcggcgagatgtcgttcgacgagcaccac 183 || |||||||||||||||||||| || || |||||||||||||| ||||||||||||||| Sbjct: 1004 tcgtgccccaactgcggcggccccgccgccctcggcgagatgtccttcgacgagcaccac 1063 Query: 184 ctccgcgtcgagaacgcgcgcctgcgcgacgagatcgaccgcatctccgccatcgccgcc 243 ||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 1064 ctccgcgtcgagaacgcccgcctccgcgacgagatcgaccgcatctccggcatcgccgcc 1123 Query: 244 aagtacgtcggcaagccc 261 ||| |||||||||||||| Sbjct: 1124 aagcacgtcggcaagccc 1141
>dbj|AB077993.1| Oryza sativa mRNA for Roc1, complete cds Length = 3196 Score = 353 bits (178), Expect = 3e-94 Identities = 238/258 (92%) Strand = Plus / Plus Query: 4 cagaacaagaggacccaaatgaagaaccagcacgagaggcacgagaactcgcagctgagg 63 ||||||||| | || || |||||||||||||||||||||||||||||| |||||||| || Sbjct: 780 cagaacaagcgcacacagatgaagaaccagcacgagaggcacgagaacgcgcagctgcgg 839 Query: 64 gcggacaacgacaagctgcgggcggagaacatgcgctacaaggaggcgctcagcagcgcg 123 ||||| |||||||||||||| |||||||||||||| ||||||||||| || ||||||||| Sbjct: 840 gcggagaacgacaagctgcgcgcggagaacatgcgatacaaggaggccctgagcagcgcg 899 Query: 124 tcatgccccaactgcggcggcccggcggcgctcggcgagatgtcgttcgacgagcaccac 183 || |||||||||||||||||||| || || |||||||||||||| ||||||||||||||| Sbjct: 900 tcgtgccccaactgcggcggccccgccgccctcggcgagatgtccttcgacgagcaccac 959 Query: 184 ctccgcgtcgagaacgcgcgcctgcgcgacgagatcgaccgcatctccgccatcgccgcc 243 ||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 960 ctccgcgtcgagaacgcccgcctccgcgacgagatcgaccgcatctccggcatcgccgcc 1019 Query: 244 aagtacgtcggcaagccc 261 ||| |||||||||||||| Sbjct: 1020 aagcacgtcggcaagccc 1037
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 341 bits (172), Expect = 1e-90 Identities = 220/236 (93%) Strand = Plus / Plus Query: 26 agaaccagcacgagaggcacgagaactcgcagctgagggcggacaacgacaagctgcggg 85 |||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||| | Sbjct: 5106781 agaaccagcacgagaggcacgagaacgcgcagctgcgggcggagaacgacaagctgcgcg 5106840 Query: 86 cggagaacatgcgctacaaggaggcgctcagcagcgcgtcatgccccaactgcggcggcc 145 ||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 5106841 cggagaacatgcgatacaaggaggccctgagcagcgcgtcgtgccccaactgcggcggcc 5106900 Query: 146 cggcggcgctcggcgagatgtcgttcgacgagcaccacctccgcgtcgagaacgcgcgcc 205 | || || |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 5106901 ccgccgccctcggcgagatgtccttcgacgagcaccacctccgcgtcgagaacgcccgcc 5106960 Query: 206 tgcgcgacgagatcgaccgcatctccgccatcgccgccaagtacgtcggcaagccc 261 | ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 5106961 tccgcgacgagatcgaccgcatctccggcatcgccgccaagcacgtcggcaagccc 5107016 Score = 230 bits (116), Expect = 3e-57 Identities = 173/192 (90%) Strand = Plus / Minus Query: 70 aacgacaagctgcgggcggagaacatgcgctacaaggaggcgctcagcagcgcgtcatgc 129 ||||| ||||||||||| ||||||||| | |||||||||||||| || |||||| ||| Sbjct: 2030564 aacgagaagctgcgggcagagaacatgaggtacaaggaggcgcttgccaacgcgtcctgc 2030505 Query: 130 cccaactgcggcggcccggcggcgctcggcgagatgtcgttcgacgagcaccacctccgc 189 |||||||||||||| ||||| || ||||||||||||| ||||||||||||||||||||| Sbjct: 2030504 cccaactgcggcggtccggccgccatcggcgagatgtccttcgacgagcaccacctccgc 2030445 Query: 190 gtcgagaacgcgcgcctgcgcgacgagatcgaccgcatctccgccatcgccgccaagtac 249 |||||||||||||||| ||||||||||| ||| | |||||||||||||||||||||||| Sbjct: 2030444 ctcgagaacgcgcgcctccgcgacgagattgacaggatctccgccatcgccgccaagtac 2030385 Query: 250 gtcggcaagccc 261 |||||||||||| Sbjct: 2030384 gtcggcaagccc 2030373
>dbj|AP004568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0547A06 Length = 150922 Score = 341 bits (172), Expect = 1e-90 Identities = 220/236 (93%) Strand = Plus / Plus Query: 26 agaaccagcacgagaggcacgagaactcgcagctgagggcggacaacgacaagctgcggg 85 |||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||| | Sbjct: 144338 agaaccagcacgagaggcacgagaacgcgcagctgcgggcggagaacgacaagctgcgcg 144397 Query: 86 cggagaacatgcgctacaaggaggcgctcagcagcgcgtcatgccccaactgcggcggcc 145 ||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 144398 cggagaacatgcgatacaaggaggccctgagcagcgcgtcgtgccccaactgcggcggcc 144457 Query: 146 cggcggcgctcggcgagatgtcgttcgacgagcaccacctccgcgtcgagaacgcgcgcc 205 | || || |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 144458 ccgccgccctcggcgagatgtccttcgacgagcaccacctccgcgtcgagaacgcccgcc 144517 Query: 206 tgcgcgacgagatcgaccgcatctccgccatcgccgccaagtacgtcggcaagccc 261 | ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 144518 tccgcgacgagatcgaccgcatctccggcatcgccgccaagcacgtcggcaagccc 144573
>dbj|AP004656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0020B10 Length = 136175 Score = 341 bits (172), Expect = 1e-90 Identities = 220/236 (93%) Strand = Plus / Plus Query: 26 agaaccagcacgagaggcacgagaactcgcagctgagggcggacaacgacaagctgcggg 85 |||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||| | Sbjct: 56545 agaaccagcacgagaggcacgagaacgcgcagctgcgggcggagaacgacaagctgcgcg 56604 Query: 86 cggagaacatgcgctacaaggaggcgctcagcagcgcgtcatgccccaactgcggcggcc 145 ||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 56605 cggagaacatgcgatacaaggaggccctgagcagcgcgtcgtgccccaactgcggcggcc 56664 Query: 146 cggcggcgctcggcgagatgtcgttcgacgagcaccacctccgcgtcgagaacgcgcgcc 205 | || || |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 56665 ccgccgccctcggcgagatgtccttcgacgagcaccacctccgcgtcgagaacgcccgcc 56724 Query: 206 tgcgcgacgagatcgaccgcatctccgccatcgccgccaagtacgtcggcaagccc 261 | ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 56725 tccgcgacgagatcgaccgcatctccggcatcgccgccaagcacgtcggcaagccc 56780
>emb|AJ250987.1|ZMA250987 Zea mays mRNA for OCL5 protein (ocl5 gene) Length = 3010 Score = 315 bits (159), Expect = 6e-83 Identities = 267/303 (88%) Strand = Plus / Plus Query: 1 ttccagaacaagaggacccaaatgaagaaccagcacgagaggcacgagaactcgcagctg 60 |||||||||||| | || || |||||||||||||||||| ||||||||||| |||||||| Sbjct: 556 ttccagaacaagcgcacacagatgaagaaccagcacgagcggcacgagaacgcgcagctg 615 Query: 61 agggcggacaacgacaagctgcgggcggagaacatgcgctacaaggaggcgctcagcagc 120 | ||||| |||||||||||||| || ||||||||||| |||||||||||||| ||| Sbjct: 616 cgcgcggagaacgacaagctgcgagccgagaacatgcggtacaaggaggcgctgggcacg 675 Query: 121 gcgtcatgccccaactgcggcggcccggcggcgctcggcgagatgtcgttcgacgagcac 180 || || ||||||| ||||||||||||||| || |||||||||||||| |||||||||||| Sbjct: 676 gcctcgtgccccagctgcggcggcccggctgccctcggcgagatgtccttcgacgagcac 735 Query: 181 cacctccgcgtcgagaacgcgcgcctgcgcgacgagatcgaccgcatctccgccatcgcc 240 ||||||||| |||||||||| ||||| || |||||||||||||| ||||| | ||||||| Sbjct: 736 cacctccgcctcgagaacgctcgcctccgtgacgagatcgaccggatctcgggcatcgcc 795 Query: 241 gccaagtacgtcggcaagcccatggtgcccttcccggtgctctccagccccctcgccgcc 300 |||||| |||| || ||||||||||| ||||||| |||||||||||||| ||||||||| Sbjct: 796 gccaagcacgtgggaaagcccatggtctccttccccgtgctctccagcccgctcgccgcc 855 Query: 301 gcc 303 ||| Sbjct: 856 gcc 858
>dbj|AB101645.1| Oryza sativa (japonica cultivar-group) Roc2 mRNA for GL2-type homeodomain protein, complete cds Length = 3063 Score = 287 bits (145), Expect = 1e-74 Identities = 247/281 (87%) Strand = Plus / Plus Query: 1 ttccagaacaagaggacccaaatgaagaaccagcacgagaggcacgagaactcgcagctg 60 |||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 710 ttccagaacaagcgcacccaaatgaagaaccagcatgagaggcacgagaactcgcagctg 769 Query: 61 agggcggacaacgacaagctgcgggcggagaacatgcgctacaaggaggcgctcagcagc 120 || |||| ||||| ||||| ||||| ||||||||||| ||||||||||| || |||||| Sbjct: 770 cggtcggataacgagaagctccgggccgagaacatgcggtacaaggaggccctgagcagc 829 Query: 121 gcgtcatgccccaactgcggcggcccggcggcgctcggcgagatgtcgttcgacgagcac 180 || || |||||||||||||||||||| || || |||||||||||||| |||||||||||| Sbjct: 830 gcctcctgccccaactgcggcggccccgccgccctcggcgagatgtccttcgacgagcac 889 Query: 181 cacctccgcgtcgagaacgcgcgcctgcgcgacgagatcgaccgcatctccgccatcgcc 240 ||||||||| |||||||||| ||||| ||||| |||||||| | || || || ||||| Sbjct: 890 cacctccgcatcgagaacgcccgcctccgcgaagagatcgataggatatcggcgatcgcg 949 Query: 241 gccaagtacgtcggcaagcccatggtgcccttcccggtgct 281 || |||||||| || ||||| |||||||| ||||||||||| Sbjct: 950 gcgaagtacgtggggaagccaatggtgccgttcccggtgct 990
>ref|XM_473974.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2346 Score = 280 bits (141), Expect = 3e-72 Identities = 246/281 (87%) Strand = Plus / Plus Query: 1 ttccagaacaagaggacccaaatgaagaaccagcacgagaggcacgagaactcgcagctg 60 |||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 445 ttccagaacaagcgcacccaaatgaagaaccagcatgagaggcacgagaactcgcagctg 504 Query: 61 agggcggacaacgacaagctgcgggcggagaacatgcgctacaaggaggcgctcagcagc 120 || |||| ||||| ||||| ||||| ||||||||||| ||||||||||| || |||||| Sbjct: 505 cggtcggataacgagaagctccgggccgagaacatgcggtacaaggaggccctgagcagc 564 Query: 121 gcgtcatgccccaactgcggcggcccggcggcgctcggcgagatgtcgttcgacgagcac 180 || || |||||||| ||||||||||| || || |||||||||||||| |||||||||||| Sbjct: 565 gcctcctgccccaattgcggcggccccgccgccctcggcgagatgtccttcgacgagcac 624 Query: 181 cacctccgcgtcgagaacgcgcgcctgcgcgacgagatcgaccgcatctccgccatcgcc 240 ||||||||| |||||||||| ||||| ||||| |||||||| | || || || ||||| Sbjct: 625 cacctccgcatcgagaacgcccgcctccgcgaagagatcgataggatatcggcgatcgcg 684 Query: 241 gccaagtacgtcggcaagcccatggtgcccttcccggtgct 281 || |||||||| || ||||| |||||||| ||||||||||| Sbjct: 685 gcgaagtacgtggggaagccaatggtgccgttcccggtgct 725
>ref|XM_479975.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2487 Score = 240 bits (121), Expect = 3e-60 Identities = 226/261 (86%) Strand = Plus / Plus Query: 1 ttccagaacaagaggacccaaatgaagaaccagcacgagaggcacgagaactcgcagctg 60 |||||||||||| | ||||| ||||||| ||||| ||||| ||||||||| |||| Sbjct: 643 ttccagaacaagcgcacccagatgaagacgcagcatgagagacacgagaacaatgcgctg 702 Query: 61 agggcggacaacgacaagctgcgggcggagaacatgcgctacaaggaggcgctcagcagc 120 | || || ||||| ||||||||||| ||||||||| | |||||||||||||| || | Sbjct: 703 cgcgcagagaacgagaagctgcgggcagagaacatgaggtacaaggaggcgcttgccaac 762 Query: 121 gcgtcatgccccaactgcggcggcccggcggcgctcggcgagatgtcgttcgacgagcac 180 ||||| ||||||||||||||||| ||||| || ||||||||||||| |||||||||||| Sbjct: 763 gcgtcctgccccaactgcggcggtccggccgccatcggcgagatgtccttcgacgagcac 822 Query: 181 cacctccgcgtcgagaacgcgcgcctgcgcgacgagatcgaccgcatctccgccatcgcc 240 ||||||||| |||||||||||||||| ||||||||||| ||| | ||||||||||||||| Sbjct: 823 cacctccgcctcgagaacgcgcgcctccgcgacgagattgacaggatctccgccatcgcc 882 Query: 241 gccaagtacgtcggcaagccc 261 ||||||||||||||||||||| Sbjct: 883 gccaagtacgtcggcaagccc 903
>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1613_G04 Length = 135357 Score = 230 bits (116), Expect = 3e-57 Identities = 173/192 (90%) Strand = Plus / Minus Query: 70 aacgacaagctgcgggcggagaacatgcgctacaaggaggcgctcagcagcgcgtcatgc 129 ||||| ||||||||||| ||||||||| | |||||||||||||| || |||||| ||| Sbjct: 24094 aacgagaagctgcgggcagagaacatgaggtacaaggaggcgcttgccaacgcgtcctgc 24035 Query: 130 cccaactgcggcggcccggcggcgctcggcgagatgtcgttcgacgagcaccacctccgc 189 |||||||||||||| ||||| || ||||||||||||| ||||||||||||||||||||| Sbjct: 24034 cccaactgcggcggtccggccgccatcggcgagatgtccttcgacgagcaccacctccgc 23975 Query: 190 gtcgagaacgcgcgcctgcgcgacgagatcgaccgcatctccgccatcgccgccaagtac 249 |||||||||||||||| ||||||||||| ||| | |||||||||||||||||||||||| Sbjct: 23974 ctcgagaacgcgcgcctccgcgacgagattgacaggatctccgccatcgccgccaagtac 23915 Query: 250 gtcggcaagccc 261 |||||||||||| Sbjct: 23914 gtcggcaagccc 23903
>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0680F05 Length = 185495 Score = 230 bits (116), Expect = 3e-57 Identities = 173/192 (90%) Strand = Plus / Minus Query: 70 aacgacaagctgcgggcggagaacatgcgctacaaggaggcgctcagcagcgcgtcatgc 129 ||||| ||||||||||| ||||||||| | |||||||||||||| || |||||| ||| Sbjct: 155762 aacgagaagctgcgggcagagaacatgaggtacaaggaggcgcttgccaacgcgtcctgc 155703 Query: 130 cccaactgcggcggcccggcggcgctcggcgagatgtcgttcgacgagcaccacctccgc 189 |||||||||||||| ||||| || ||||||||||||| ||||||||||||||||||||| Sbjct: 155702 cccaactgcggcggtccggccgccatcggcgagatgtccttcgacgagcaccacctccgc 155643 Query: 190 gtcgagaacgcgcgcctgcgcgacgagatcgaccgcatctccgccatcgccgccaagtac 249 |||||||||||||||| ||||||||||| ||| | |||||||||||||||||||||||| Sbjct: 155642 ctcgagaacgcgcgcctccgcgacgagattgacaggatctccgccatcgccgccaagtac 155583 Query: 250 gtcggcaagccc 261 |||||||||||| Sbjct: 155582 gtcggcaagccc 155571
>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08, complete sequence Length = 166951 Score = 212 bits (107), Expect = 7e-52 Identities = 167/187 (89%) Strand = Plus / Minus Query: 26 agaaccagcacgagaggcacgagaactcgcagctgagggcggacaacgacaagctgcggg 85 |||||||||| |||||||||||||||||||||||| || |||| ||||| ||||| |||| Sbjct: 110580 agaaccagcatgagaggcacgagaactcgcagctgcggtcggataacgagaagctccggg 110521 Query: 86 cggagaacatgcgctacaaggaggcgctcagcagcgcgtcatgccccaactgcggcggcc 145 | ||||||||||| ||||||||||| || |||||||| || |||||||| |||||||||| Sbjct: 110520 ccgagaacatgcggtacaaggaggccctgagcagcgcctcctgccccaattgcggcggcc 110461 Query: 146 cggcggcgctcggcgagatgtcgttcgacgagcaccacctccgcgtcgagaacgcgcgcc 205 | || || |||||||||||||| ||||||||||||||||||||| |||||||||| |||| Sbjct: 110460 ccgccgccctcggcgagatgtccttcgacgagcaccacctccgcatcgagaacgcccgcc 110401 Query: 206 tgcgcga 212 | ||||| Sbjct: 110400 tccgcga 110394 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Minus Query: 235 atcgccgccaagtacgtcggcaagcccatggtgcccttcccggtgct 281 ||||| || |||||||| || ||||| |||||||| ||||||||||| Sbjct: 110278 atcgcggcgaagtacgtggggaagccaatggtgccgttcccggtgct 110232
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 212 bits (107), Expect = 7e-52 Identities = 167/187 (89%) Strand = Plus / Minus Query: 26 agaaccagcacgagaggcacgagaactcgcagctgagggcggacaacgacaagctgcggg 85 |||||||||| |||||||||||||||||||||||| || |||| ||||| ||||| |||| Sbjct: 31937714 agaaccagcatgagaggcacgagaactcgcagctgcggtcggataacgagaagctccggg 31937655 Query: 86 cggagaacatgcgctacaaggaggcgctcagcagcgcgtcatgccccaactgcggcggcc 145 | ||||||||||| ||||||||||| || |||||||| || |||||||| |||||||||| Sbjct: 31937654 ccgagaacatgcggtacaaggaggccctgagcagcgcctcctgccccaattgcggcggcc 31937595 Query: 146 cggcggcgctcggcgagatgtcgttcgacgagcaccacctccgcgtcgagaacgcgcgcc 205 | || || |||||||||||||| ||||||||||||||||||||| |||||||||| |||| Sbjct: 31937594 ccgccgccctcggcgagatgtccttcgacgagcaccacctccgcatcgagaacgcccgcc 31937535 Query: 206 tgcgcga 212 | ||||| Sbjct: 31937534 tccgcga 31937528 Score = 61.9 bits (31), Expect = 1e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 135 ctgcggcggcccggcggcgctcggcgagatgtcgttcgacgagcaccacctccgcgtcga 194 |||||||||||||||| |||||| ||| |||| | || ||||||||||| |||||||| Sbjct: 28579246 ctgcggcggcccggcgatgctcggggaggtgtccctggaggagcaccaccttcgcgtcga 28579187 Query: 195 gaacgcg 201 ||||||| Sbjct: 28579186 gaacgcg 28579180 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Minus Query: 235 atcgccgccaagtacgtcggcaagcccatggtgcccttcccggtgct 281 ||||| || |||||||| || ||||| |||||||| ||||||||||| Sbjct: 31937412 atcgcggcgaagtacgtggggaagccaatggtgccgttcccggtgct 31937366
>dbj|AB101650.1| Oryza sativa (japonica cultivar-group) Roc7 mRNA for GL2-type homeodomain protein, partial cds Length = 390 Score = 210 bits (106), Expect = 3e-51 Identities = 211/246 (85%) Strand = Plus / Plus Query: 1 ttccagaacaagaggacccaaatgaagaaccagcacgagaggcacgagaactcgcagctg 60 |||||||||||| | ||||| ||||||| ||||| ||||| ||||||||| |||| Sbjct: 145 ttccagaacaagcgcacccagatgaagacgcagcatgagagacacgagaacaatgcgctg 204 Query: 61 agggcggacaacgacaagctgcgggcggagaacatgcgctacaaggaggcgctcagcagc 120 | || || ||||| ||||||||||| ||||||||| | |||||||||||||| || | Sbjct: 205 cgcgcagagaacgagaagctgcgggcagagaacatgaggtacaaggaggcgcttgccaac 264 Query: 121 gcgtcatgccccaactgcggcggcccggcggcgctcggcgagatgtcgttcgacgagcac 180 ||||| ||||||||||||||||| ||||| || ||||||||||||| |||||||||||| Sbjct: 265 gcgtcctgccccaactgcggcggtccggccgccatcggcgagatgtccttcgacgagcac 324 Query: 181 cacctccgcgtcgagaacgcgcgcctgcgcgacgagatcgaccgcatctccgccatcgcc 240 ||||||||| |||||||||||||||| ||||||||||| ||| | ||||||||||||||| Sbjct: 325 cacctccgcctcgagaacgcgcgcctccgcgacgagattgacaggatctccgccatcgcc 384 Query: 241 gccaag 246 |||||| Sbjct: 385 gccaag 390
>dbj|AK120496.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120I03, full insert sequence Length = 3280 Score = 188 bits (95), Expect = 1e-44 Identities = 131/143 (91%) Strand = Plus / Plus Query: 4 cagaacaagaggacccaaatgaagaaccagcacgagaggcacgagaactcgcagctgagg 63 ||||||||| | || || |||||||||||||||||||||||||||||| |||||||| || Sbjct: 884 cagaacaagcgcacacagatgaagaaccagcacgagaggcacgagaacgcgcagctgcgg 943 Query: 64 gcggacaacgacaagctgcgggcggagaacatgcgctacaaggaggcgctcagcagcgcg 123 ||||| |||||||||||||| |||||||||||||| ||||||||||| || ||||||||| Sbjct: 944 gcggagaacgacaagctgcgcgcggagaacatgcgatacaaggaggccctgagcagcgcg 1003 Query: 124 tcatgccccaactgcggcggccc 146 || |||||||||||||||||||| Sbjct: 1004 tcgtgccccaactgcggcggccc 1026 Score = 153 bits (77), Expect = 5e-34 Identities = 89/93 (95%) Strand = Plus / Plus Query: 169 ttcgacgagcaccacctccgcgtcgagaacgcgcgcctgcgcgacgagatcgaccgcatc 228 |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 1035 ttcgacgagcaccacctccgcgtcgagaacgcccgcctccgcgacgagatcgaccgcatc 1094 Query: 229 tccgccatcgccgccaagtacgtcggcaagccc 261 |||| ||||||||||||| |||||||||||||| Sbjct: 1095 tccggcatcgccgccaagcacgtcggcaagccc 1127
>gb|AY555143.1| Zea may BAC clone c573L14, complete sequence Length = 144792 Score = 180 bits (91), Expect = 2e-42 Identities = 103/107 (96%) Strand = Plus / Plus Query: 155 tcggcgagatgtcgttcgacgagcaccacctccgcgtcgagaacgcgcgcctgcgcgacg 214 ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 68616 tcggcgagatgtccttcgacgagcaccacctccgcgtcgagaacgcgcgcctccgcgacg 68675 Query: 215 agatcgaccgcatctccgccatcgccgccaagtacgtcggcaagccc 261 || |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 68676 aggtcgaccgcatctccaccatcgccgccaagtacgtcggcaagccc 68722 Score = 79.8 bits (40), Expect = 6e-12 Identities = 94/112 (83%) Strand = Plus / Plus Query: 41 ggcacgagaactcgcagctgagggcggacaacgacaagctgcgggcggagaacatgcgct 100 ||||||||||| ||||||| ||||||| ||||| |||||||| || |||||| ||| | Sbjct: 68493 ggcacgagaacatgcagctgcgggcggagaacgagaagctgcgcgccgagaacgcgcggt 68552 Query: 101 acaaggaggcgctcagcagcgcgtcatgccccaactgcggcggcccggcggc 152 ||||||| |||||| || ||| || ||||| | |||||||||||||||||| Sbjct: 68553 acaaggacgcgctcgccaacgcctcgtgcccgagctgcggcggcccggcggc 68604
>gb|AY110048.1| Zea mays CL1207_1 mRNA sequence Length = 2985 Score = 129 bits (65), Expect = 8e-27 Identities = 107/121 (88%) Strand = Plus / Plus Query: 162 gatgtcgttcgacgagcaccacctccgcgtcgagaacgcgcgcctgcgcgacgagatcga 221 |||||| ||||||||||||||||||||| |||||||||| ||||| || ||||||||||| Sbjct: 717 gatgtccttcgacgagcaccacctccgcctcgagaacgctcgcctccgtgacgagatcga 776 Query: 222 ccgcatctccgccatcgccgccaagtacgtcggcaagcccatggtgcccttcccggtgct 281 ||| ||||| | ||||||||||||| |||| || ||||||||||| ||||||| ||||| Sbjct: 777 ccggatctcgggcatcgccgccaagcacgtgggaaagcccatggtctccttccccgtgct 836 Query: 282 c 282 | Sbjct: 837 c 837 Score = 129 bits (65), Expect = 8e-27 Identities = 101/113 (89%) Strand = Plus / Plus Query: 1 ttccagaacaagaggacccaaatgaagaaccagcacgagaggcacgagaactcgcagctg 60 |||||||||||| | || || |||||||||||||||||| ||||||||||| |||||||| Sbjct: 556 ttccagaacaagcgcacacagatgaagaaccagcacgagcggcacgagaacgcgcagctg 615 Query: 61 agggcggacaacgacaagctgcgggcggagaacatgcgctacaaggaggcgct 113 | ||||| |||||||||||||| || ||||||||||| |||||||||||||| Sbjct: 616 cgcgcggagaacgacaagctgcgagccgagaacatgcggtacaaggaggcgct 668
>dbj|AK101563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050E18, full insert sequence Length = 2264 Score = 123 bits (62), Expect = 5e-25 Identities = 122/142 (85%) Strand = Plus / Plus Query: 140 gcggcccggcggcgctcggcgagatgtcgttcgacgagcaccacctccgcgtcgagaacg 199 ||||||| || || |||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct: 1 gcggccccgccgccctcggcgagatgtccttcgacgagcaccacctccgcatcgagaacg 60 Query: 200 cgcgcctgcgcgacgagatcgaccgcatctccgccatcgccgccaagtacgtcggcaagc 259 | ||||| ||||| |||||||| | || || || ||||| || |||||||| || |||| Sbjct: 61 cccgcctccgcgaagagatcgataggatatcggcgatcgcggcgaagtacgtggggaagc 120 Query: 260 ccatggtgcccttcccggtgct 281 | |||||||| ||||||||||| Sbjct: 121 caatggtgccgttcccggtgct 142
>gb|AF466200.2| Sorghum bicolor putative protein kinase gene, partial cds; putative Cf-2, fertilization-independent endosperm proteins, hypothetical protein, putative non-LTR retroelement reverse transcriptase, OCL5 protein, tryptophan synthase beta-subunit, hypothetical proteins, putative AP endonuclease, putative RNA polymerase II complex component SRB7, putative beta-1,3-glucanase, hypothetical protein, TNP2-like protein, hypothetical protein, putative phosphate/phosphoenolpyruvate translocator, putative protein, hypothetical proteins, putative galactosyltransferase family, hypothetical protein, putative cytochrome P450 family, putative lipid transfer protein, putative photoreceptor-interacting protein, and hypothetical protein genes, complete cds; and hypothetical protein gene, partial cds Length = 202197 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Plus Query: 160 gagatgtcgttcgacgagcaccacctccgcgtcgagaacgcgcgcctgcgcgacgagatc 219 |||||||| ||||| || |||||||| ||| | ||||| |||||||| || |||||| || Sbjct: 60823 gagatgtccttcgatgaacaccaccttcgcattgagaatgcgcgcctccgggacgaggtc 60882 Query: 220 gaccgcatctccgccatcgccgccaagtacgtcggcaagccc 261 || ||||||||| ||||||| ||||||||||| ||||||||| Sbjct: 60883 gatcgcatctccaccatcgctgccaagtacgttggcaagccc 60924
>gb|U34743.1|PSU34743 Phalaenopsis sp. 'hybrid SM9108' homeobox protein mRNA, complete cds Length = 3060 Score = 77.8 bits (39), Expect = 2e-11 Identities = 147/183 (80%) Strand = Plus / Plus Query: 4 cagaacaagaggacccaaatgaagaaccagcacgagaggcacgagaactcgcagctgagg 63 ||||||||| | || |||||||||| ||||| || || || ||||| || ||||| ||| Sbjct: 702 cagaacaagcgcacgcaaatgaagacacagcatgacagacaagagaattcacagcttagg 761 Query: 64 gcggacaacgacaagctgcgggcggagaacatgcgctacaaggaggcgctcagcagcgcg 123 || || ||||| ||||||||| || ||| |||| || ||||| || || |||| || Sbjct: 762 gcagagaacgataagctgcggaatgaaaacctgcggtataaggaagcactgagcaatgcc 821 Query: 124 tcatgccccaactgcggcggcccggcggcgctcggcgagatgtcgttcgacgagcaccac 183 |||||||| |||||||||||||| || | || || ||||||||||| |||||||||||| Sbjct: 822 tcatgccctaactgcggcggcccagctacacttggggagatgtcgtttgacgagcaccac 881 Query: 184 ctc 186 ||| Sbjct: 882 ctc 884
>emb|AJ250985.1|ZMA250985 Zea mays mRNA for OCL3 protein (ocl3 gene) Length = 3580 Score = 65.9 bits (33), Expect = 9e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 36 cgagaggcacgagaactcgcagctgagggcggacaacgacaagctgcgggcggagaacat 95 |||| ||||||||||| ||| ||||||| ||| |||||||||||| ||||||||||||| Sbjct: 1029 cgagcggcacgagaacgcgctgctgaggcaggagaacgacaagctgagggcggagaacat 1088 Query: 96 g 96 | Sbjct: 1089 g 1089 Score = 42.1 bits (21), Expect = 1.4 Identities = 60/73 (82%) Strand = Plus / Plus Query: 131 ccaactgcggcggcccggcggcgctcggcgagatgtcgttcgacgagcaccacctccgcg 190 ||||||| |||||| | || | |||||| ||| ||||| | || ||||| ||||||||| Sbjct: 1124 ccaactgtggcggcgccgccgtgctcggggaggtgtcgctggaggagcagcacctccgca 1183 Query: 191 tcgagaacgcgcg 203 | ||||||||||| Sbjct: 1184 tagagaacgcgcg 1196
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Minus Query: 135 ctgcggcggcccggcggcgctcggcgagatgtcgttcgacgagcaccacctccgcgtcga 194 |||||||||| |||||| |||||||||| ||||| | || ||||| ||||| ||| |||| Sbjct: 20271984 ctgcggcggcgcggcggtgctcggcgaggtgtcgctggaggagcagcacctgcgcatcga 20271925 Query: 195 gaacgcgcg 203 ||||||||| Sbjct: 20271924 gaacgcgcg 20271916 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Minus Query: 36 cgagaggcacgagaactcgcagctgagggcggacaacgacaagctgcgggcggagaacat 95 |||| |||| |||||| ||| |||| || ||| |||||||||||| ||||||||||||| Sbjct: 20272083 cgagcggcatgagaacgcgctgctgcggcaggagaacgacaagctgagggcggagaacat 20272024 Query: 96 g 96 | Sbjct: 20272023 g 20272023 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 tctccgccatcgccgccaag 246 |||||||||||||||||||| Sbjct: 7546475 tctccgccatcgccgccaag 7546456
>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1439_F07 Length = 153743 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Minus Query: 135 ctgcggcggcccggcggcgctcggcgagatgtcgttcgacgagcaccacctccgcgtcga 194 |||||||||| |||||| |||||||||| ||||| | || ||||| ||||| ||| |||| Sbjct: 51111 ctgcggcggcgcggcggtgctcggcgaggtgtcgctggaggagcagcacctgcgcatcga 51052 Query: 195 gaacgcgcg 203 ||||||||| Sbjct: 51051 gaacgcgcg 51043 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Minus Query: 36 cgagaggcacgagaactcgcagctgagggcggacaacgacaagctgcgggcggagaacat 95 |||| |||| |||||| ||| |||| || ||| |||||||||||| ||||||||||||| Sbjct: 51210 cgagcggcatgagaacgcgctgctgcggcaggagaacgacaagctgagggcggagaacat 51151 Query: 96 g 96 | Sbjct: 51150 g 51150
>dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0047P18 Length = 169128 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Minus Query: 135 ctgcggcggcccggcggcgctcggcgagatgtcgttcgacgagcaccacctccgcgtcga 194 |||||||||| |||||| |||||||||| ||||| | || ||||| ||||| ||| |||| Sbjct: 165484 ctgcggcggcgcggcggtgctcggcgaggtgtcgctggaggagcagcacctgcgcatcga 165425 Query: 195 gaacgcgcg 203 ||||||||| Sbjct: 165424 gaacgcgcg 165416 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Minus Query: 36 cgagaggcacgagaactcgcagctgagggcggacaacgacaagctgcgggcggagaacat 95 |||| |||| |||||| ||| |||| || ||| |||||||||||| ||||||||||||| Sbjct: 165583 cgagcggcatgagaacgcgctgctgcggcaggagaacgacaagctgagggcggagaacat 165524 Query: 96 g 96 | Sbjct: 165523 g 165523
>gb|AY110994.1| Zea mays CL1209_1 mRNA sequence Length = 3550 Score = 65.9 bits (33), Expect = 9e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 36 cgagaggcacgagaactcgcagctgagggcggacaacgacaagctgcgggcggagaacat 95 |||| ||||||||||| ||| ||||||| ||| |||||||||||| ||||||||||||| Sbjct: 1029 cgagcggcacgagaacgcgctgctgaggcaggagaacgacaagctgagggcggagaacat 1088 Query: 96 g 96 | Sbjct: 1089 g 1089
>dbj|AB101649.1| Oryza sativa (japonica cultivar-group) Roc6 mRNA for GL2-type homeodomain protein, partial cds Length = 393 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 135 ctgcggcggcccggcggcgctcggcgagatgtcgttcgacgagcaccacctccgcgtcga 194 |||||||||| |||||| |||||||||| ||||| | || ||||| ||||| ||| |||| Sbjct: 282 ctgcggcggcgcggcggtgctcggcgaggtgtcgctggaggagcagcacctgcgcatcga 341 Query: 195 gaacgcgcg 203 ||||||||| Sbjct: 342 gaacgcgcg 350 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Plus Query: 36 cgagaggcacgagaactcgcagctgagggcggacaacgacaagctgcgggcggagaacat 95 |||| |||| |||||| ||| |||| || ||| |||||||||||| ||||||||||||| Sbjct: 183 cgagcggcatgagaacgcgctgctgcggcaggagaacgacaagctgagggcggagaacat 242 Query: 96 g 96 | Sbjct: 243 g 243
>ref|XM_473543.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2421 Score = 61.9 bits (31), Expect = 1e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 135 ctgcggcggcccggcggcgctcggcgagatgtcgttcgacgagcaccacctccgcgtcga 194 |||||||||||||||| |||||| ||| |||| | || ||||||||||| |||||||| Sbjct: 588 ctgcggcggcccggcgatgctcggggaggtgtccctggaggagcaccaccttcgcgtcga 647 Query: 195 gaacgcg 201 ||||||| Sbjct: 648 gaacgcg 654
>emb|AL663003.2|OSJN00203 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032E06, complete sequence Length = 125196 Score = 61.9 bits (31), Expect = 1e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 135 ctgcggcggcccggcggcgctcggcgagatgtcgttcgacgagcaccacctccgcgtcga 194 |||||||||||||||| |||||| ||| |||| | || ||||||||||| |||||||| Sbjct: 70036 ctgcggcggcccggcgatgctcggggaggtgtccctggaggagcaccaccttcgcgtcga 69977 Query: 195 gaacgcg 201 ||||||| Sbjct: 69976 gaacgcg 69970
>dbj|AK112099.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-E06, full insert sequence Length = 3089 Score = 61.9 bits (31), Expect = 1e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 135 ctgcggcggcccggcggcgctcggcgagatgtcgttcgacgagcaccacctccgcgtcga 194 |||||||||||||||| |||||| ||| |||| | || ||||||||||| |||||||| Sbjct: 725 ctgcggcggcccggcgatgctcggggaggtgtccctggaggagcaccaccttcgcgtcga 784 Query: 195 gaacgcg 201 ||||||| Sbjct: 785 gaacgcg 791
>dbj|AK111914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128F17, full insert sequence Length = 3052 Score = 61.9 bits (31), Expect = 1e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 135 ctgcggcggcccggcggcgctcggcgagatgtcgttcgacgagcaccacctccgcgtcga 194 |||||||||||||||| |||||| ||| |||| | || ||||||||||| |||||||| Sbjct: 708 ctgcggcggcccggcgatgctcggggaggtgtccctggaggagcaccaccttcgcgtcga 767 Query: 195 gaacgcg 201 ||||||| Sbjct: 768 gaacgcg 774
>dbj|AB101647.1| Oryza sativa (japonica cultivar-group) Roc4 mRNA for GL2-type homeodomain protein, complete cds Length = 2957 Score = 61.9 bits (31), Expect = 1e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 135 ctgcggcggcccggcggcgctcggcgagatgtcgttcgacgagcaccacctccgcgtcga 194 |||||||||||||||| |||||| ||| |||| | || ||||||||||| |||||||| Sbjct: 588 ctgcggcggcccggcgatgctcggggaggtgtccctggaggagcaccaccttcgcgtcga 647 Query: 195 gaacgcg 201 ||||||| Sbjct: 648 gaacgcg 654
>emb|AJ250986.2|ZMA250986 Zea mays mRNA for OCL4 protein Length = 3217 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 154 ctcggcgagatgtcgttcgacgagcaccacctccgcgtcgagaacgc 200 |||||||||||||||| ||| ||||| || |||||| |||||||||| Sbjct: 507 ctcggcgagatgtcgtacgaggagcagcagctccgcatcgagaacgc 553
>gb|AY109766.1| Zea mays CL1208_1 mRNA sequence Length = 3968 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 154 ctcggcgagatgtcgttcgacgagcaccacctccgcgtcgagaacgc 200 |||||||||||||||| ||| ||||| || |||||| |||||||||| Sbjct: 1267 ctcggcgagatgtcgtacgaggagcagcagctccgcatcgagaacgc 1313
>ref|NM_100402.2| Arabidopsis thaliana DNA binding / transcription factor AT1G05230 transcript variant AT1G05230.1 mRNA, complete cds Length = 2679 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 16 acccaaatgaagaaccagcacgagaggcacgagaactcgcagctgagggcggacaacgac 75 |||||||||||||| || |||||| |||| |||||||| || || ||||||| ||||| Sbjct: 455 acccaaatgaagaatcatcacgagcggcatgagaactcacatcttcgggcggagaacgaa 514 Query: 76 aagct 80 ||||| Sbjct: 515 aagct 519
>ref|NM_179265.1| Arabidopsis thaliana DNA binding / transcription factor AT1G05230 transcript variant AT1G05230.2 mRNA, complete cds Length = 2888 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 16 acccaaatgaagaaccagcacgagaggcacgagaactcgcagctgagggcggacaacgac 75 |||||||||||||| || |||||| |||| |||||||| || || ||||||| ||||| Sbjct: 664 acccaaatgaagaatcatcacgagcggcatgagaactcacatcttcgggcggagaacgaa 723 Query: 76 aagct 80 ||||| Sbjct: 724 aagct 728
>gb|AY091690.1| Arabidopsis thaliana At1g05230/YUP8H12_16 mRNA, complete cds Length = 2166 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 16 acccaaatgaagaaccagcacgagaggcacgagaactcgcagctgagggcggacaacgac 75 |||||||||||||| || |||||| |||| |||||||| || || ||||||| ||||| Sbjct: 349 acccaaatgaagaatcatcacgagcggcatgagaactcacatcttcgggcggagaacgaa 408 Query: 76 aagct 80 ||||| Sbjct: 409 aagct 413
>gb|AY037177.1| Arabidopsis thaliana At1g05230/YUP8H12_16 mRNA, complete cds Length = 2677 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 16 acccaaatgaagaaccagcacgagaggcacgagaactcgcagctgagggcggacaacgac 75 |||||||||||||| || |||||| |||| |||||||| || || ||||||| ||||| Sbjct: 453 acccaaatgaagaatcatcacgagcggcatgagaactcacatcttcgggcggagaacgaa 512 Query: 76 aagct 80 ||||| Sbjct: 513 aagct 517
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 198 cgcgcgcctgcgcgacgagatcga 221 |||||||||||||||||||||||| Sbjct: 3292246 cgcgcgcctgcgcgacgagatcga 3292269 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 209 gcgacgagatcgaccgcatct 229 ||||||||||||||||||||| Sbjct: 1932454 gcgacgagatcgaccgcatct 1932434
>emb|AJ748731.1| Zea mays OCL1 gene for homeobox protein OCL1, exons 1-9 Length = 9947 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Plus Query: 70 aacgacaagctgcgggcggagaacatg 96 ||||||||||||||||| ||||||||| Sbjct: 4242 aacgacaagctgcgggccgagaacatg 4268 Score = 44.1 bits (22), Expect = 0.35 Identities = 46/54 (85%) Strand = Plus / Plus Query: 211 gacgagatcgaccgcatctccgccatcgccgccaagtacgtcggcaagcccatg 264 |||||| || ||||| ||| |||| ||||| |||||| | |||||||||||||| Sbjct: 4383 gacgagctcaaccgcgtctacgccctcgccaccaagttcctcggcaagcccatg 4436
>emb|Y17898.1|ZMA17898 Zea mays mRNA for encoding homeobox protein Length = 3092 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Plus Query: 70 aacgacaagctgcgggcggagaacatg 96 ||||||||||||||||| ||||||||| Sbjct: 729 aacgacaagctgcgggccgagaacatg 755 Score = 44.1 bits (22), Expect = 0.35 Identities = 46/54 (85%) Strand = Plus / Plus Query: 211 gacgagatcgaccgcatctccgccatcgccgccaagtacgtcggcaagcccatg 264 |||||| || ||||| ||| |||| ||||| |||||| | |||||||||||||| Sbjct: 870 gacgagctcaaccgcgtctacgccctcgccaccaagttcctcggcaagcccatg 923
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 209 gcgacgagatcgaccgcatctcc 231 ||||||||||||||||||||||| Sbjct: 809621 gcgacgagatcgaccgcatctcc 809599
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 202 cgcctgcgcgacgagatcgacc 223 |||||||||||||||||||||| Sbjct: 740910 cgcctgcgcgacgagatcgacc 740931 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 ctgcgcgacgagatcgaccgcatc 228 ||||||| |||||||||||||||| Sbjct: 2870895 ctgcgcggcgagatcgaccgcatc 2870918
>gb|AC127457.3| Homo sapiens chromosome 16 clone RP11-100F10, complete sequence Length = 86390 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 287 gccccctcgccgccgccccggg 308 |||||||||||||||||||||| Sbjct: 77991 gccccctcgccgccgccccggg 77970
>gb|AC106782.5| Homo sapiens chromosome 16 clone RP11-347C12, complete sequence Length = 181001 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 287 gccccctcgccgccgccccggg 308 |||||||||||||||||||||| Sbjct: 179168 gccccctcgccgccgccccggg 179147
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 294 cgccgccgccccgggcgcctcc 315 |||||||||||||||||||||| Sbjct: 3803391 cgccgccgccccgggcgcctcc 3803412
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 373 cagcagggcgtcgtggtcgagc 394 |||||||||||||||||||||| Sbjct: 2908505 cagcagggcgtcgtggtcgagc 2908484 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 371 agcagcagggcgtcgtggtcgagc 394 |||||||||||||||| ||||||| Sbjct: 595501 agcagcagggcgtcgtagtcgagc 595524
>emb|BX294146.1| Pirellula sp. strain 1 complete genome; segment 14/24 Length = 324450 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 tgccccaactgcggcggcccg 147 ||||||||||||||||||||| Sbjct: 18031 tgccccaactgcggcggcccg 18051
>emb|BX294143.1| Pirellula sp. strain 1 complete genome; segment 11/24 Length = 303250 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 tgccccaactgcggcggcccg 147 ||||||||||||||||||||| Sbjct: 208678 tgccccaactgcggcggcccg 208698
>emb|BX294134.1| Pirellula sp. strain 1 complete genome; segment 2/24 Length = 304450 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 tgccccaactgcggcggcccg 147 ||||||||||||||||||||| Sbjct: 192851 tgccccaactgcggcggcccg 192831 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 tgccccaactgcggcggcccg 147 ||||||||||||||||||||| Sbjct: 182162 tgccccaactgcggcggcccg 182142 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 tgccccaactgcggcggcccg 147 ||||||||||||||||||||| Sbjct: 179111 tgccccaactgcggcggcccg 179091
>gb|AE005091.1| Halobacterium sp. NRC-1 section 122 of 170 of the complete genome Length = 12431 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 ccacctccgcgtcgagaacgc 200 ||||||||||||||||||||| Sbjct: 2453 ccacctccgcgtcgagaacgc 2433
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 gcccggcggcgctcggcgaga 163 ||||||||||||||||||||| Sbjct: 8982 gcccggcggcgctcggcgaga 8962
>gb|AC167243.3| Mus musculus BAC clone RP24-144E2 from chromosome 9, complete sequence Length = 193364 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cgccgccgccccgggcgcct 313 |||||||||||||||||||| Sbjct: 153671 cgccgccgccccgggcgcct 153652
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 cgagatgtcgttcgacgagc 178 |||||||||||||||||||| Sbjct: 1031108 cgagatgtcgttcgacgagc 1031127
>gb|AC137848.31| Mus musculus chromosome 9, clone RP24-118I23, complete sequence Length = 190317 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cgccgccgccccgggcgcct 313 |||||||||||||||||||| Sbjct: 16839 cgccgccgccccgggcgcct 16858
>ref|XM_418619.1| PREDICTED: Gallus gallus similar to signal transducing adaptor molecule 1 (LOC420517), mRNA Length = 3069 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 gcccggcggcgctcggcgag 162 |||||||||||||||||||| Sbjct: 595 gcccggcggcgctcggcgag 576
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 gccccgggcgcctccgcctacgac 324 ||||||||||| |||||||||||| Sbjct: 1346488 gccccgggcgcttccgcctacgac 1346511
>ref|XM_957589.1| Neurospora crassa OR74A hypothetical protein (NCU08012.1) partial mRNA Length = 1935 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 tgcccttcccggtgctctcc 285 |||||||||||||||||||| Sbjct: 533 tgcccttcccggtgctctcc 552
>ref|XM_328717.1| Neurospora crassa OR74A hypothetical protein (NCU08012.1) partial mRNA Length = 1935 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 tgcccttcccggtgctctcc 285 |||||||||||||||||||| Sbjct: 533 tgcccttcccggtgctctcc 552
>ref|NM_031419.2| Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta (NFKBIZ), transcript variant 1, mRNA Length = 3938 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cgccgccgccccgggcgcct 313 |||||||||||||||||||| Sbjct: 238 cgccgccgccccgggcgcct 257
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 199 gcgcgcctgcgcgacgagatcgac 222 ||||| |||||||||||||||||| Sbjct: 453312 gcgcggctgcgcgacgagatcgac 453289
>gb|AC146145.3| Pan troglodytes BAC clone RP43-37L16 from 7, complete sequence Length = 209347 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 actgcggcggcccggcggcg 153 |||||||||||||||||||| Sbjct: 76264 actgcggcggcccggcggcg 76245
>ref|NM_014296.2| Homo sapiens calpain 7 (CAPN7), mRNA Length = 4385 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 actgcggcggcccggcggcg 153 |||||||||||||||||||| Sbjct: 209 actgcggcggcccggcggcg 190
>ref|XM_983710.1| PREDICTED: Mus musculus hypothetical protein LOC670872 (LOC670872), mRNA Length = 705 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cgccgccgccccgggcgcct 313 |||||||||||||||||||| Sbjct: 468 cgccgccgccccgggcgcct 449
>ref|XM_981150.1| PREDICTED: Mus musculus hypothetical protein LOC666039 (LOC666039), mRNA Length = 705 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cgccgccgccccgggcgcct 313 |||||||||||||||||||| Sbjct: 468 cgccgccgccccgggcgcct 449
>gb|AC118009.7| Mus musculus chromosome 8, clone RP23-442H2, complete sequence Length = 208458 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gacccaaatgaagaaccagc 34 |||||||||||||||||||| Sbjct: 35166 gacccaaatgaagaaccagc 35185
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 gcgacgagatcgaccgcatc 228 |||||||||||||||||||| Sbjct: 552046 gcgacgagatcgaccgcatc 552065
>ref|XM_801641.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507073.30) partial mRNA Length = 2217 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 gcacgagaactcgcagctga 61 |||||||||||||||||||| Sbjct: 2151 gcacgagaactcgcagctga 2170
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 ctgcgcgacgagatcgaccgcatc 228 ||||||| |||||||||||||||| Sbjct: 1156575 ctgcgcggcgagatcgaccgcatc 1156552
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 gcgcctgcgcgacgagatcg 220 |||||||||||||||||||| Sbjct: 128925 gcgcctgcgcgacgagatcg 128944
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 gcgacgagatcgaccgcatc 228 |||||||||||||||||||| Sbjct: 626128 gcgacgagatcgaccgcatc 626147
>emb|BX897674.1| Neurospora crassa DNA linkage group IV BAC clone B2N18 Length = 113778 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 tgcccttcccggtgctctcc 285 |||||||||||||||||||| Sbjct: 59581 tgcccttcccggtgctctcc 59562
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 199 gcgcgcctgcgcgacgagatcgac 222 ||||| |||||||||||||||||| Sbjct: 1772657 gcgcggctgcgcgacgagatcgac 1772634
>gb|BC060800.1| Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta, transcript variant 1, mRNA (cDNA clone MGC:71609 IMAGE:30344780), complete cds Length = 3937 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cgccgccgccccgggcgcct 313 |||||||||||||||||||| Sbjct: 238 cgccgccgccccgggcgcct 257
>gb|BC056202.1| Homo sapiens calpain 7, mRNA (cDNA clone MGC:51000 IMAGE:5274889), complete cds Length = 3750 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 actgcggcggcccggcggcg 153 |||||||||||||||||||| Sbjct: 187 actgcggcggcccggcggcg 168
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cgtcgtggtcgagctggccg 400 |||||||||||||||||||| Sbjct: 56438 cgtcgtggtcgagctggccg 56419
>emb|AL662875.14| Mouse DNA sequence from clone RP23-67E18 on chromosome 11 Contains the 3' end of the gene for the likely ortholog of H. sapiens C/EBP-induced protein (5730593F17Rik), the Ugalt2 gene for UDP-galactose translocator 2, the Spop gene for speckle-type POZ protein, the Nxph3 gene for neurexophilin 3, the Ngfr gene for nerve growth factor receptor (TNFR superfamily, member 16), the 5' end of a novel gene and a CpG island, complete sequence Length = 255199 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 cggtgctctccagccccctc 294 |||||||||||||||||||| Sbjct: 50056 cggtgctctccagccccctc 50037
>gb|AC020651.19| Homo sapiens 3 BAC RP11-49I4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152649 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cgccgccgccccgggcgcct 313 |||||||||||||||||||| Sbjct: 93003 cgccgccgccccgggcgcct 92984
>emb|BX571771.5| Zebrafish DNA sequence from clone CH211-160F8 in linkage group 21, complete sequence Length = 162245 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 aacaagaggacccaaatgaa 26 |||||||||||||||||||| Sbjct: 120176 aacaagaggacccaaatgaa 120195
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ggcggcccggcggcgctcgg 158 |||||||||||||||||||| Sbjct: 3477608 ggcggcccggcggcgctcgg 3477589
>dbj|AK091782.1| Homo sapiens cDNA FLJ34463 fis, clone HLUNG2003042, moderately similar to Mus musculus mRNA for MAIL Length = 2058 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cgccgccgccccgggcgcct 313 |||||||||||||||||||| Sbjct: 238 cgccgccgccccgggcgcct 257
>dbj|AB037925.1| Homo sapiens MAIL mRNA, complete cds Length = 3869 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cgccgccgccccgggcgcct 313 |||||||||||||||||||| Sbjct: 171 cgccgccgccccgggcgcct 190
>dbj|AK143858.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430209B22 product:unclassifiable, full insert sequence Length = 2921 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 cggtgctctccagccccctc 294 |||||||||||||||||||| Sbjct: 1381 cggtgctctccagccccctc 1362
>dbj|AK080232.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530086D01 product:unclassifiable, full insert sequence Length = 1997 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 cggtgctctccagccccctc 294 |||||||||||||||||||| Sbjct: 1292 cggtgctctccagccccctc 1273
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 295 gccgccgccccgggcgcctccgcc 318 ||||||||||| |||||||||||| Sbjct: 2685233 gccgccgcccccggcgcctccgcc 2685256
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 199 gcgcgcctgcgcgacgagatcgac 222 ||||| |||||||||||||||||| Sbjct: 1011424 gcgcggctgcgcgacgagatcgac 1011447
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 ctgcgcgacgagatcgaccgcatc 228 |||||||||| ||||||||||||| Sbjct: 251641 ctgcgcgacgcgatcgaccgcatc 251618
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 tctccgccatcgccgccaag 246 |||||||||||||||||||| Sbjct: 18133666 tctccgccatcgccgccaag 18133647 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 tctccgccatcgccgccaag 246 |||||||||||||||||||| Sbjct: 18126153 tctccgccatcgccgccaag 18126134
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 tctccgccatcgccgccaag 246 |||||||||||||||||||| Sbjct: 9688216 tctccgccatcgccgccaag 9688235
>emb|BX640583.7| Zebrafish DNA sequence from clone CH211-186C22 in linkage group 21, complete sequence Length = 130141 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aacaagaggacccaaatgaa 26 |||||||||||||||||||| Sbjct: 13319 aacaagaggacccaaatgaa 13300
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cggcccggcggcgctcggcg 160 |||||||||||||||||||| Sbjct: 8801073 cggcccggcggcgctcggcg 8801054
>dbj|AB074898.1| Homo sapiens IkappaB-zeta mRNA, 5' untranslated region Length = 1229 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cgccgccgccccgggcgcct 313 |||||||||||||||||||| Sbjct: 1129 cgccgccgccccgggcgcct 1148
>gb|AC090949.2| Homo sapiens chromosome 3 clone RP11-421B21 map 3p, complete sequence Length = 176751 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 actgcggcggcccggcggcg 153 |||||||||||||||||||| Sbjct: 75167 actgcggcggcccggcggcg 75148
>gb|AC087590.2| Homo sapiens chromosome 3 clone RP11-321I9 map 3p, complete sequence Length = 188132 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 actgcggcggcccggcggcg 153 |||||||||||||||||||| Sbjct: 161743 actgcggcggcccggcggcg 161762
>gb|AF235504.1|AF235504 Streptomyces hygroscopicus var. ascomyceticus FK520 biosynthetic gene cluster, partial sequence Length = 77534 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 ccgcctacgacgtcttcgcc 333 |||||||||||||||||||| Sbjct: 31876 ccgcctacgacgtcttcgcc 31857
>dbj|AP005190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0477A12 Length = 138141 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 tctccgccatcgccgccaag 246 |||||||||||||||||||| Sbjct: 68972 tctccgccatcgccgccaag 68953 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 tctccgccatcgccgccaag 246 |||||||||||||||||||| Sbjct: 61459 tctccgccatcgccgccaag 61440
>dbj|AP005428.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0693E08 Length = 157969 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 tctccgccatcgccgccaag 246 |||||||||||||||||||| Sbjct: 152434 tctccgccatcgccgccaag 152453
>dbj|AP005916.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0066M12 Length = 162198 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 tctccgccatcgccgccaag 246 |||||||||||||||||||| Sbjct: 54890 tctccgccatcgccgccaag 54871
>dbj|AP005837.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0024K20 Length = 165041 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 tctccgccatcgccgccaag 246 |||||||||||||||||||| Sbjct: 150279 tctccgccatcgccgccaag 150260
>emb|AL929512.14| Zebrafish DNA sequence from clone CH211-1L10, complete sequence Length = 197232 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 tccagaacaagaggacccaaatga 25 ||||||| |||||||||||||||| Sbjct: 18620 tccagaaaaagaggacccaaatga 18597
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 gcgacgagatcgaccgcatc 228 |||||||||||||||||||| Sbjct: 1518655 gcgacgagatcgaccgcatc 1518636
>gb|AY707080.1| Streptomyces turgidiscabies pathogenicity island putative transposase, hypothetical protein, putative transposase (IS1629), and negrogenic protein (nec1) genes, putative transposase pseudogene, and putative resolvase/invertase gene, complete cds Length = 11000 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 tctccgccatcgccgccaagtacg 250 |||||||||||||||| ||||||| Sbjct: 6457 tctccgccatcgccgcgaagtacg 6480
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 cgcctgcgcgacgagatcga 221 |||||||||||||||||||| Sbjct: 1979906 cgcctgcgcgacgagatcga 1979925
>emb|AL807828.14| Mouse DNA sequence from clone RP23-184N11 on chromosome 4, complete sequence Length = 174593 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tccagaacaagaggacccaa 21 |||||||||||||||||||| Sbjct: 90095 tccagaacaagaggacccaa 90114
>dbj|AB028639.1| Homo sapiens CAPN7 mRNA for PalBH, complete cds Length = 2813 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 actgcggcggcccggcggcg 153 |||||||||||||||||||| Sbjct: 190 actgcggcggcccggcggcg 171
>dbj|D37878.1|STMBCPE Streptomyces hygroscopicus bcpE gene for carboxyphosphonoenolpyruvate synthase, complete cds Length = 2095 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 cggcggcccggcggcgctcg 157 |||||||||||||||||||| Sbjct: 103 cggcggcccggcggcgctcg 84
>dbj|AB029917.1| Streptomyces hygroscopicus orfZZ gene, complete cds Length = 1360 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 cggcggcccggcggcgctcg 157 |||||||||||||||||||| Sbjct: 734 cggcggcccggcggcgctcg 715 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,700,669 Number of Sequences: 3902068 Number of extensions: 2700669 Number of successful extensions: 72573 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 109 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 69059 Number of HSP's gapped (non-prelim): 3507 length of query: 405 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 383 effective length of database: 17,147,199,772 effective search space: 6567377512676 effective search space used: 6567377512676 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
