>Y24K_STRGR (P12752) Hypothetical 24.7 kDa protein in photolyase 5'region|
          Length = 238

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -3

Query: 391 KKAISELRPTSSGLILSSMARSRATSAGAGTVPGPRKTARQAW 263
           K A SEL   + G ++ S +++RA    +G  P P     Q W
Sbjct: 136 KTASSELTGGAHGTVVVSQSQNRAVFLASGMAPPPSGKVYQIW 178

>DEND_MOUSE (Q80TS7) Dendrin|
          Length = 656

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = -2

Query: 98  RQQDRRRSSSKETRLIAQEREREQAGG 18
           R+Q++R+++S+E      ER+R +AGG
Sbjct: 54  REQEKRKAASQEREAKETERKRRKAGG 80

>DEND_HUMAN (O94850) Dendrin|
          Length = 657

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = -2

Query: 98  RQQDRRRSSSKETRLIAQEREREQAGG 18
           R+Q++R+++S+E      ER+R +AGG
Sbjct: 54  REQEKRKAASQEREAKETERKRRKAGG 80

>DEND_RAT (P50617) Dendrin|
          Length = 653

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = -2

Query: 98  RQQDRRRSSSKETRLIAQEREREQAGG 18
           R+Q++R+++S+E      ER+R +AGG
Sbjct: 54  REQEKRKAASQEREAKETERKRRKAGG 80

>HME2_CHICK (Q05917) Homeobox protein engrailed-2 (Gg-En-2)|
          Length = 288

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +2

Query: 2  HPHPHPHRL 28
          HPHPHPHR+
Sbjct: 40 HPHPHPHRI 48

>ODD_DROME (P23803) Protein odd-skipped|
          Length = 392

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 2   HPHPHPHRLAP 34
           HPHPHPH + P
Sbjct: 162 HPHPHPHHVRP 172

>TMM24_HUMAN (O14523) Transmembrane protein 24 (Protein DLNB23)|
          Length = 706

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 9/40 (22%)
 Frame = -3

Query: 340 SMARSRATSAGAGTVPGPR---------KTARQAWKSRWM 248
           S+ R RAT AGA   PG R         K+ R+ W+  W+
Sbjct: 68  SLLRLRATRAGAAEEPGVRGLLASLFAFKSFRENWQRAWV 107


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,846,991
Number of Sequences: 219361
Number of extensions: 306341
Number of successful extensions: 1902
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1891
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)