ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast14e01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_469323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1438 Score = 174 bits (88), Expect = 1e-40 Identities = 106/112 (94%) Strand = Plus / Plus Query: 260 ctggtgccgggcgtgatgatcttcggagactcggtggtggacgccggcaacaacaaccgg 319 ||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||||||| Sbjct: 148 ctggtgccgggggtgatgatattcggggactcggtggtggacgccgggaacaacaaccgg 207 Query: 320 ctggccacgctggtgcgcgccgacttccctccctacggccgcgacttcccgg 371 ||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 208 ctggcgacgctggtgcgcgccgacttcccgccctacggccgcgacttcccgg 259
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 174 bits (88), Expect = 1e-40 Identities = 106/112 (94%) Strand = Plus / Plus Query: 260 ctggtgccgggcgtgatgatcttcggagactcggtggtggacgccggcaacaacaaccgg 319 ||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||||||| Sbjct: 26960737 ctggtgccgggggtgatgatattcggggactcggtggtggacgccgggaacaacaaccgg 26960796 Query: 320 ctggccacgctggtgcgcgccgacttccctccctacggccgcgacttcccgg 371 ||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 26960797 ctggcgacgctggtgcgcgccgacttcccgccctacggccgcgacttcccgg 26960848 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 281 ttcggagactcggtggtggacgccggcaacaacaac 316 ||||| |||||| | || |||||||||||||||||| Sbjct: 11033265 ttcggtgactcgctcgtcgacgccggcaacaacaac 11033300
>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete sequence Length = 149303 Score = 174 bits (88), Expect = 1e-40 Identities = 106/112 (94%) Strand = Plus / Plus Query: 260 ctggtgccgggcgtgatgatcttcggagactcggtggtggacgccggcaacaacaaccgg 319 ||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||||||| Sbjct: 139737 ctggtgccgggggtgatgatattcggggactcggtggtggacgccgggaacaacaaccgg 139796 Query: 320 ctggccacgctggtgcgcgccgacttccctccctacggccgcgacttcccgg 371 ||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 139797 ctggcgacgctggtgcgcgccgacttcccgccctacggccgcgacttcccgg 139848
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 174 bits (88), Expect = 1e-40 Identities = 106/112 (94%) Strand = Plus / Plus Query: 260 ctggtgccgggcgtgatgatcttcggagactcggtggtggacgccggcaacaacaaccgg 319 ||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||||||| Sbjct: 27052060 ctggtgccgggggtgatgatattcggggactcggtggtggacgccgggaacaacaaccgg 27052119 Query: 320 ctggccacgctggtgcgcgccgacttccctccctacggccgcgacttcccgg 371 ||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 27052120 ctggcgacgctggtgcgcgccgacttcccgccctacggccgcgacttcccgg 27052171 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 281 ttcggagactcggtggtggacgccggcaacaacaac 316 ||||| |||||| | || |||||||||||||||||| Sbjct: 11030028 ttcggtgactcgctcgtcgacgccggcaacaacaac 11030063
>gb|AC087851.4|AC087851 Oryza sativa chromosome 3 BAC OSJNBb0072E24 genomic sequence, complete sequence Length = 111882 Score = 174 bits (88), Expect = 1e-40 Identities = 106/112 (94%) Strand = Plus / Minus Query: 260 ctggtgccgggcgtgatgatcttcggagactcggtggtggacgccggcaacaacaaccgg 319 ||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||||||| Sbjct: 98662 ctggtgccgggggtgatgatattcggggactcggtggtggacgccgggaacaacaaccgg 98603 Query: 320 ctggccacgctggtgcgcgccgacttccctccctacggccgcgacttcccgg 371 ||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 98602 ctggcgacgctggtgcgcgccgacttcccgccctacggccgcgacttcccgg 98551
>dbj|AK099266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013F22, full insert sequence Length = 1508 Score = 174 bits (88), Expect = 1e-40 Identities = 106/112 (94%) Strand = Plus / Plus Query: 260 ctggtgccgggcgtgatgatcttcggagactcggtggtggacgccggcaacaacaaccgg 319 ||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||||||| Sbjct: 161 ctggtgccgggggtgatgatattcggggactcggtggtggacgccgggaacaacaaccgg 220 Query: 320 ctggccacgctggtgcgcgccgacttccctccctacggccgcgacttcccgg 371 ||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 221 ctggcgacgctggtgcgcgccgacttcccgccctacggccgcgacttcccgg 272
>dbj|AK060516.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-A02, full insert sequence Length = 1482 Score = 174 bits (88), Expect = 1e-40 Identities = 106/112 (94%) Strand = Plus / Plus Query: 260 ctggtgccgggcgtgatgatcttcggagactcggtggtggacgccggcaacaacaaccgg 319 ||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||||||| Sbjct: 160 ctggtgccgggggtgatgatattcggggactcggtggtggacgccgggaacaacaaccgg 219 Query: 320 ctggccacgctggtgcgcgccgacttccctccctacggccgcgacttcccgg 371 ||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 220 ctggcgacgctggtgcgcgccgacttcccgccctacggccgcgacttcccgg 271
>ref|XM_475407.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1083 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 305 ggcaacaacaaccggctggccacgctggtgcgcgccgacttccctccctacggccgcgac 364 |||||||||||||| || ||||||||||||||||||||| | | ||||||||||||||| Sbjct: 160 ggcaacaacaaccgcctcgccacgctggtgcgcgccgaccacgcgccctacggccgcgac 219 Query: 365 ttccc 369 ||||| Sbjct: 220 ttccc 224
>gb|AC112159.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_C01, complete sequence Length = 114236 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 305 ggcaacaacaaccggctggccacgctggtgcgcgccgacttccctccctacggccgcgac 364 |||||||||||||| || ||||||||||||||||||||| | | ||||||||||||||| Sbjct: 47811 ggcaacaacaaccgcctcgccacgctggtgcgcgccgaccacgcgccctacggccgcgac 47752 Query: 365 ttccc 369 ||||| Sbjct: 47751 ttccc 47747
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 305 ggcaacaacaaccggctggccacgctggtgcgcgccgacttccctccctacggccgcgac 364 |||||||||||||| || ||||||||||||||||||||| | | ||||||||||||||| Sbjct: 22849107 ggcaacaacaaccgcctcgccacgctggtgcgcgccgaccacgcgccctacggccgcgac 22849048 Query: 365 ttccc 369 ||||| Sbjct: 22849047 ttccc 22849043 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 281 ttcggagactcggtggtggacgccggcaacaacaac 316 ||||| |||||| |||||||| ||||||||||||| Sbjct: 25484571 ttcggggactcgctggtggacaacggcaacaacaac 25484536
>dbj|AK064681.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-A05, full insert sequence Length = 1385 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 305 ggcaacaacaaccggctggccacgctggtgcgcgccgacttccctccctacggccgcgac 364 |||||||||||||| || ||||||||||||||||||||| | | ||||||||||||||| Sbjct: 200 ggcaacaacaaccgcctcgccacgctggtgcgcgccgaccacgcgccctacggccgcgac 259 Query: 365 ttccc 369 ||||| Sbjct: 260 ttccc 264
>emb|AJ276389.1|DOR276389 Dendrobium grex Madame Thong-IN mRNA for knotted1-like homeobox protein Length = 1400 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 250 ggggcaggcactggtgccgggcgtgatgatcttcggagactcggtggtggac 301 |||||| | ||||||||| | ||||||||||||||| ||||||||||||||| Sbjct: 200 ggggcaaggactggtgcccgccgtgatgatcttcggcgactcggtggtggac 149
>ref|NM_194799.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0029P06.17), mRNA Length = 351 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Plus Query: 342 acttccctccctacggccgcgacttccc 369 ||||||||||||||||||| |||||||| Sbjct: 188 acttccctccctacggccgagacttccc 215
>gb|AC112513.1| Oryza sativa chromosome 10 clone OSJNAa0029P06, complete sequence Length = 122319 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Plus Query: 342 acttccctccctacggccgcgacttccc 369 ||||||||||||||||||| |||||||| Sbjct: 37014 acttccctccctacggccgagacttccc 37041
>gb|AC090873.4| Oryza sativa chromosome 10 clone OSJNBa0029P06, complete sequence Length = 151533 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Plus Query: 342 acttccctccctacggccgcgacttccc 369 ||||||||||||||||||| |||||||| Sbjct: 128547 acttccctccctacggccgagacttccc 128574
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Plus Query: 342 acttccctccctacggccgcgacttccc 369 ||||||||||||||||||| |||||||| Sbjct: 2471815 acttccctccctacggccgagacttccc 2471842 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 296 gtggacgccggcaacaacaac 316 ||||||||||||||||||||| Sbjct: 15222559 gtggacgccggcaacaacaac 15222539
>dbj|AK100609.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107L07, full insert sequence Length = 1299 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Plus Query: 342 acttccctccctacggccgcgacttccc 369 ||||||||||||||||||| |||||||| Sbjct: 219 acttccctccctacggccgagacttccc 246
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Plus Query: 342 acttccctccctacggccgcgacttccc 369 ||||||||||||||||||| |||||||| Sbjct: 2471766 acttccctccctacggccgagacttccc 2471793 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 296 gtggacgccggcaacaacaac 316 ||||||||||||||||||||| Sbjct: 15230800 gtggacgccggcaacaacaac 15230780
>ref|NM_188437.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1119 Score = 46.1 bits (23), Expect = 0.083 Identities = 29/31 (93%) Strand = Plus / Plus Query: 280 cttcggagactcggtggtggacgccggcaac 310 |||||| |||||| ||||||||||||||||| Sbjct: 99 cttcggggactcgctggtggacgccggcaac 129
>ref|XM_465469.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1014 Score = 46.1 bits (23), Expect = 0.083 Identities = 74/91 (81%) Strand = Plus / Plus Query: 281 ttcggagactcggtggtggacgccggcaacaacaaccggctggccacgctggtgcgcgcc 340 ||||| |||||| |||||||||||| ||||||||| | || ||| ||||||| | Sbjct: 118 ttcggcgactcgacggtggacgccgggaacaacaacgcggtgcagacggtggtgcggagc 177 Query: 341 gacttccctccctacggccgcgacttcccgg 371 ||||||| ||||| |||||||||||||||| Sbjct: 178 aacttcccgccctatggccgcgacttcccgg 208
>ref|NM_190450.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1140 Score = 46.1 bits (23), Expect = 0.083 Identities = 59/71 (83%) Strand = Plus / Plus Query: 299 gacgccggcaacaacaaccggctggccacgctggtgcgcgccgacttccctccctacggc 358 ||||| |||||||||||||| || | ||| ||||||||||||| ||| ||||||||| Sbjct: 157 gacgcgggcaacaacaaccgcctcgtcaccgcggtgcgcgccgaccacccgccctacggc 216 Query: 359 cgcgacttccc 369 | |||||||| Sbjct: 217 caggacttccc 227
>ref|XM_655246.1| Aspergillus nidulans FGSC A4 60S acidic ribosomal protein P0 (AN2734.2), mRNA Length = 939 Score = 46.1 bits (23), Expect = 0.083 Identities = 23/23 (100%) Strand = Plus / Plus Query: 201 cgccgctgctggtggtgctgctc 223 ||||||||||||||||||||||| Sbjct: 837 cgccgctgctggtggtgctgctc 859
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.083 Identities = 35/39 (89%) Strand = Plus / Minus Query: 278 atcttcggagactcggtggtggacgccggcaacaacaac 316 |||||||| |||||| |||||||| ||||||||||||| Sbjct: 10070983 atcttcggcgactcgctggtggacagcggcaacaacaac 10070945
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.083 Identities = 35/39 (89%) Strand = Plus / Minus Query: 278 atcttcggagactcggtggtggacgccggcaacaacaac 316 |||||||| |||||| | || |||||||||||||||||| Sbjct: 28171055 atcttcggggactcgctcgtcgacgccggcaacaacaac 28171017 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 199 ggcgccgctgctggtggtgctgctctcggcggcggc 234 |||| |||||||| || ||||||| ||||||||||| Sbjct: 4062918 ggcggcgctgctgctgctgctgctgtcggcggcggc 4062883
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.083 Identities = 74/91 (81%) Strand = Plus / Plus Query: 281 ttcggagactcggtggtggacgccggcaacaacaaccggctggccacgctggtgcgcgcc 340 ||||| |||||| |||||||||||| ||||||||| | || ||| ||||||| | Sbjct: 15410485 ttcggcgactcgacggtggacgccgggaacaacaacgcggtgcagacggtggtgcggagc 15410544 Query: 341 gacttccctccctacggccgcgacttcccgg 371 ||||||| ||||| |||||||||||||||| Sbjct: 15410545 aacttcccgccctatggccgcgacttcccgg 15410575 Score = 44.1 bits (22), Expect = 0.33 Identities = 37/42 (88%) Strand = Plus / Minus Query: 281 ttcggagactcggtggtggacgccggcaacaacaaccggctg 322 ||||| |||||| |||||| |||||||||||||||||||| Sbjct: 547597 ttcggtgactcgacggtggatcccggcaacaacaaccggctg 547556 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 cgacttccctccctacggccgcgac 364 ||||||| ||||||||||||||||| Sbjct: 4942954 cgacttcgctccctacggccgcgac 4942978 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 cggtggtggacgccggcaac 310 |||||||||||||||||||| Sbjct: 29206814 cggtggtggacgccggcaac 29206833
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.083 Identities = 59/71 (83%) Strand = Plus / Plus Query: 299 gacgccggcaacaacaaccggctggccacgctggtgcgcgccgacttccctccctacggc 358 ||||| |||||||||||||| || | ||| ||||||||||||| ||| ||||||||| Sbjct: 35599164 gacgcgggcaacaacaaccgcctcgtcaccgcggtgcgcgccgaccacccgccctacggc 35599223 Query: 359 cgcgacttccc 369 | |||||||| Sbjct: 35599224 caggacttccc 35599234 Score = 46.1 bits (23), Expect = 0.083 Identities = 29/31 (93%) Strand = Plus / Plus Query: 280 cttcggagactcggtggtggacgccggcaac 310 |||||| |||||| ||||||||||||||||| Sbjct: 6277768 cttcggggactcgctggtggacgccggcaac 6277798 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 291 cggtggtggacgccggcaaca 311 ||||||||||||||||||||| Sbjct: 3278287 cggtggtggacgccggcaaca 3278267
>dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0446G04 Length = 143515 Score = 46.1 bits (23), Expect = 0.083 Identities = 59/71 (83%) Strand = Plus / Plus Query: 299 gacgccggcaacaacaaccggctggccacgctggtgcgcgccgacttccctccctacggc 358 ||||| |||||||||||||| || | ||| ||||||||||||| ||| ||||||||| Sbjct: 129351 gacgcgggcaacaacaaccgcctcgtcaccgcggtgcgcgccgaccacccgccctacggc 129410 Query: 359 cgcgacttccc 369 | |||||||| Sbjct: 129411 caggacttccc 129421
>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460C04 Length = 189043 Score = 46.1 bits (23), Expect = 0.083 Identities = 59/71 (83%) Strand = Plus / Plus Query: 299 gacgccggcaacaacaaccggctggccacgctggtgcgcgccgacttccctccctacggc 358 ||||| |||||||||||||| || | ||| ||||||||||||| ||| ||||||||| Sbjct: 2501 gacgcgggcaacaacaaccgcctcgtcaccgcggtgcgcgccgaccacccgccctacggc 2560 Query: 359 cgcgacttccc 369 | |||||||| Sbjct: 2561 caggacttccc 2571
>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0038J17 Length = 180186 Score = 46.1 bits (23), Expect = 0.083 Identities = 29/31 (93%) Strand = Plus / Plus Query: 280 cttcggagactcggtggtggacgccggcaac 310 |||||| |||||| ||||||||||||||||| Sbjct: 139966 cttcggggactcgctggtggacgccggcaac 139996
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 46.1 bits (23), Expect = 0.083 Identities = 29/31 (93%) Strand = Plus / Plus Query: 280 cttcggagactcggtggtggacgccggcaac 310 |||||| |||||| ||||||||||||||||| Sbjct: 48834 cttcggggactcgctggtggacgccggcaac 48864
>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0625E02 Length = 153921 Score = 46.1 bits (23), Expect = 0.083 Identities = 35/39 (89%) Strand = Plus / Minus Query: 278 atcttcggagactcggtggtggacgccggcaacaacaac 316 |||||||| |||||| | || |||||||||||||||||| Sbjct: 26600 atcttcggggactcgctcgtcgacgccggcaacaacaac 26562
>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0450A04 Length = 162545 Score = 46.1 bits (23), Expect = 0.083 Identities = 35/39 (89%) Strand = Plus / Minus Query: 278 atcttcggagactcggtggtggacgccggcaacaacaac 316 |||||||| |||||| | || |||||||||||||||||| Sbjct: 154351 atcttcggggactcgctcgtcgacgccggcaacaacaac 154313
>dbj|AP005650.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078K05 Length = 162901 Score = 46.1 bits (23), Expect = 0.083 Identities = 74/91 (81%) Strand = Plus / Plus Query: 281 ttcggagactcggtggtggacgccggcaacaacaaccggctggccacgctggtgcgcgcc 340 ||||| |||||| |||||||||||| ||||||||| | || ||| ||||||| | Sbjct: 81267 ttcggcgactcgacggtggacgccgggaacaacaacgcggtgcagacggtggtgcggagc 81326 Query: 341 gacttccctccctacggccgcgacttcccgg 371 ||||||| ||||| |||||||||||||||| Sbjct: 81327 aacttcccgccctatggccgcgacttcccgg 81357
>dbj|AK104740.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D10, full insert sequence Length = 1356 Score = 46.1 bits (23), Expect = 0.083 Identities = 29/31 (93%) Strand = Plus / Plus Query: 280 cttcggagactcggtggtggacgccggcaac 310 |||||| |||||| ||||||||||||||||| Sbjct: 158 cttcggggactcgctggtggacgccggcaac 188
>dbj|AK069801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030G06, full insert sequence Length = 2935 Score = 46.1 bits (23), Expect = 0.083 Identities = 29/31 (93%) Strand = Plus / Plus Query: 280 cttcggagactcggtggtggacgccggcaac 310 |||||| |||||| ||||||||||||||||| Sbjct: 249 cttcggggactcgctggtggacgccggcaac 279
>dbj|AK065001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E04, full insert sequence Length = 1583 Score = 46.1 bits (23), Expect = 0.083 Identities = 29/31 (93%) Strand = Plus / Plus Query: 280 cttcggagactcggtggtggacgccggcaac 310 |||||| |||||| ||||||||||||||||| Sbjct: 251 cttcggggactcgctggtggacgccggcaac 281
>dbj|AK064727.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-A02, full insert sequence Length = 1381 Score = 46.1 bits (23), Expect = 0.083 Identities = 59/71 (83%) Strand = Plus / Plus Query: 299 gacgccggcaacaacaaccggctggccacgctggtgcgcgccgacttccctccctacggc 358 ||||| |||||||||||||| || | ||| ||||||||||||| ||| ||||||||| Sbjct: 201 gacgcgggcaacaacaaccgcctcgtcaccgcggtgcgcgccgaccacccgccctacggc 260 Query: 359 cgcgacttccc 369 | |||||||| Sbjct: 261 caggacttccc 271
>dbj|AK063071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-H02, full insert sequence Length = 987 Score = 46.1 bits (23), Expect = 0.083 Identities = 35/39 (89%) Strand = Plus / Plus Query: 278 atcttcggagactcggtggtggacgccggcaacaacaac 316 |||||||| |||||| |||||||| ||||||||||||| Sbjct: 173 atcttcggcgactcgctggtggacagcggcaacaacaac 211
>dbj|AK061122.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-G04, full insert sequence Length = 1666 Score = 46.1 bits (23), Expect = 0.083 Identities = 35/39 (89%) Strand = Plus / Plus Query: 278 atcttcggagactcggtggtggacgccggcaacaacaac 316 |||||||| |||||| | || |||||||||||||||||| Sbjct: 265 atcttcggggactcgctcgtcgacgccggcaacaacaac 303
>dbj|AK060120.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-F04, full insert sequence Length = 1356 Score = 46.1 bits (23), Expect = 0.083 Identities = 29/31 (93%) Strand = Plus / Plus Query: 280 cttcggagactcggtggtggacgccggcaac 310 |||||| |||||| ||||||||||||||||| Sbjct: 158 cttcggggactcgctggtggacgccggcaac 188
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.083 Identities = 35/39 (89%) Strand = Plus / Minus Query: 278 atcttcggagactcggtggtggacgccggcaacaacaac 316 |||||||| |||||| |||||||| ||||||||||||| Sbjct: 10070868 atcttcggcgactcgctggtggacagcggcaacaacaac 10070830
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 46.1 bits (23), Expect = 0.083 Identities = 35/39 (89%) Strand = Plus / Plus Query: 278 atcttcggagactcggtggtggacgccggcaacaacaac 316 |||||||| |||||| |||||||| ||||||||||||| Sbjct: 91638 atcttcggcgactcgctggtggacagcggcaacaacaac 91676
>ref|XM_463819.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1742 Score = 44.1 bits (22), Expect = 0.33 Identities = 37/42 (88%) Strand = Plus / Plus Query: 281 ttcggagactcggtggtggacgccggcaacaacaaccggctg 322 ||||| |||||| |||||| |||||||||||||||||||| Sbjct: 459 ttcggtgactcgacggtggatcccggcaacaacaaccggctg 500
>emb|AJ606032.1| Triticum aestivum partial mRNA for putative GDSL-motif lipase (at2G04570 gene) Length = 432 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Plus Query: 342 acttccctccctacggccgcgacttcccgg 371 ||||||| ||||||||||| |||||||||| Sbjct: 179 acttcccgccctacggccgggacttcccgg 208
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 176 atggccgcgaccgcggcggcatgggc 201 ||||||||||||||| |||||||||| Sbjct: 2244863 atggccgcgaccgcgtcggcatgggc 2244838
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Minus Query: 281 ttcggagactcggtggtggacgccggcaac 310 ||||| |||||| ||||||||||||||||| Sbjct: 19494537 ttcggggactcgctggtggacgccggcaac 19494508
>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0501G04 Length = 156603 Score = 44.1 bits (22), Expect = 0.33 Identities = 37/42 (88%) Strand = Plus / Minus Query: 281 ttcggagactcggtggtggacgccggcaacaacaaccggctg 322 ||||| |||||| |||||| |||||||||||||||||||| Sbjct: 25650 ttcggtgactcgacggtggatcccggcaacaacaaccggctg 25609
>dbj|AP004749.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0410C01 Length = 138424 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Minus Query: 281 ttcggagactcggtggtggacgccggcaac 310 ||||| |||||| ||||||||||||||||| Sbjct: 112946 ttcggggactcgctggtggacgccggcaac 112917
>dbj|AK106946.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-D11, full insert sequence Length = 1742 Score = 44.1 bits (22), Expect = 0.33 Identities = 37/42 (88%) Strand = Plus / Plus Query: 281 ttcggagactcggtggtggacgccggcaacaacaaccggctg 322 ||||| |||||| |||||| |||||||||||||||||||| Sbjct: 459 ttcggtgactcgacggtggatcccggcaacaacaaccggctg 500
>dbj|AK059898.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-F09, full insert sequence Length = 1432 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Plus Query: 281 ttcggagactcggtggtggacgccggcaac 310 ||||| |||||| ||||||||||||||||| Sbjct: 163 ttcggggactcgctggtggacgccggcaac 192
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 205 gctgctggtggtgctgctctcggcgg 230 ||||||||||| |||||||||||||| Sbjct: 900609 gctgctggtggggctgctctcggcgg 900584
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 202 gccgctgctggtggtgctgctctcggcgg 230 |||||||||||||||| | |||||||||| Sbjct: 3792034 gccgctgctggtggtgttcctctcggcgg 3792062
>ref|XM_550233.1| Oryza sativa (japonica cultivar-group), mRNA Length = 543 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 291 cggtggtggacgccggcaaca 311 ||||||||||||||||||||| Sbjct: 81 cggtggtggacgccggcaaca 61
>ref|XM_464399.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1134 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 cgacttccctccctacggccgcgac 364 ||||||| ||||||||||||||||| Sbjct: 183 cgacttcgctccctacggccgcgac 207
>ref|NM_196683.1| Oryza sativa (japonica cultivar-group) putative anter-specific proline-rich protein (OSJNBb0016G17.12), mRNA Length = 1077 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 gtggacgccggcaacaacaac 316 ||||||||||||||||||||| Sbjct: 139 gtggacgccggcaacaacaac 159
>ref|XM_322510.1| Neurospora crassa OR74A predicted protein (NCU00425.1) partial mRNA Length = 678 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 acaccagtgccggtgccggtc 134 ||||||||||||||||||||| Sbjct: 500 acaccagtgccggtgccggtc 480
>ref|XM_951596.1| Neurospora crassa OR74A hypothetical protein (NCU00425.1) partial mRNA Length = 678 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 acaccagtgccggtgccggtc 134 ||||||||||||||||||||| Sbjct: 500 acaccagtgccggtgccggtc 480
>ref|XM_718047.1| Candida albicans SC5314 cytosolic ribosomal acidic protein P2B (CaO19_5928), mRNA Length = 336 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 gccgctgctggtggtgctgct 222 ||||||||||||||||||||| Sbjct: 241 gccgctgctggtggtgctgct 261
>ref|XM_717900.1| Candida albicans SC5314 cytosolic ribosomal acidic protein P2B (CaO19_13349), mRNA Length = 336 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 gccgctgctggtggtgctgct 222 ||||||||||||||||||||| Sbjct: 241 gccgctgctggtggtgctgct 261
>ref|XM_883637.1| Candida albicans SC5314 hypothetical protein (CaJ7.0118) partial mRNA Length = 939 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 gccgctgctggtggtgctgct 222 ||||||||||||||||||||| Sbjct: 841 gccgctgctggtggtgctgct 861
>ref|XM_715216.1| Candida albicans SC5314 cytosolic ribosomal acidic protein P0 (RPP0) partial mRNA Length = 939 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 gccgctgctggtggtgctgct 222 ||||||||||||||||||||| Sbjct: 841 gccgctgctggtggtgctgct 861
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 ggccacgctggtgcgcgccgacttc 346 ||||||||| ||||||||||||||| Sbjct: 3270216 ggccacgcttgtgcgcgccgacttc 3270192
>gb|AF430183.1| Synthetic construct ab initio DNA sequence TaqC6 synthesized by Taq DNA polymerase Length = 376 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 197 tgggcgccgctgctggtggtgctgc 221 |||||| |||||||||||||||||| Sbjct: 166 tgggcggcgctgctggtggtgctgc 190
>gb|AF424689.1| Phytophthora infestans clone MY-23-C-03 ribosomal protein mRNA, complete cds Length = 473 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 199 ggcgccgctgctggtggtgctgctc 223 ||||| ||||||||||||||||||| Sbjct: 245 ggcgctgctgctggtggtgctgctc 269
>emb|BX908807.1| Neurospora crassa DNA linkage group III BAC contig B13B7 Length = 93134 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 acaccagtgccggtgccggtc 134 ||||||||||||||||||||| Sbjct: 67160 acaccagtgccggtgccggtc 67180
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16 Length = 349142 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 gatggccgcgaccgcggcggc 195 ||||||||||||||||||||| Sbjct: 215759 gatggccgcgaccgcggcggc 215779
>gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0016G17, complete sequence Length = 141041 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 296 gtggacgccggcaacaacaac 316 ||||||||||||||||||||| Sbjct: 76258 gtggacgccggcaacaacaac 76238
>ref|NM_080356.2| Drosophila melanogaster outstretched CG5993-RA (os), mRNA Length = 2218 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 cgccgctgctggtggtgctgc 221 ||||||||||||||||||||| Sbjct: 329 cgccgctgctggtggtgctgc 309
>gb|AC099016.1| Drosophila melanogaster, chromosome 2R, region 56A-56A, BAC clone BACR27C21, complete sequence Length = 173373 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 gcaacaacaaccggctggcca 326 ||||||||||||||||||||| Sbjct: 131851 gcaacaacaaccggctggcca 131871
>gb|AC010708.10|AC010708 Drosophila melanogaster, chromosome X, region 17A-17B, BAC clone BACR10E05, complete sequence Length = 188766 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cgccgctgctggtggtgctgc 221 ||||||||||||||||||||| Sbjct: 25158 cgccgctgctggtggtgctgc 25178
>gb|AC022348.2|AC022348 Drosophila melanogaster, chromosome X, region 17E-18A, BAC clone BACR32F24, complete sequence Length = 162307 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cgccgctgctggtggtgctgc 221 ||||||||||||||||||||| Sbjct: 118512 cgccgctgctggtggtgctgc 118532
>gb|AF231684.1|AF231684 Drosophila melanogaster outstretched (os) gene, complete cds Length = 5792 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 cgccgctgctggtggtgctgc 221 ||||||||||||||||||||| Sbjct: 2354 cgccgctgctggtggtgctgc 2334
>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0031B09 Length = 132729 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 cgacttccctccctacggccgcgac 364 ||||||| ||||||||||||||||| Sbjct: 14080 cgacttcgctccctacggccgcgac 14104
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_F01 Length = 113755 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 cgacttccctccctacggccgcgac 364 ||||||| ||||||||||||||||| Sbjct: 87693 cgacttcgctccctacggccgcgac 87717
>dbj|AP003209.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1189A09 Length = 167761 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 291 cggtggtggacgccggcaaca 311 ||||||||||||||||||||| Sbjct: 95916 cggtggtggacgccggcaaca 95896
>dbj|AK108567.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-C12, full insert sequence Length = 1426 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 cgacttccctccctacggccgcgac 364 ||||||| ||||||||||||||||| Sbjct: 196 cgacttcgctccctacggccgcgac 220
>gb|BT023994.1| Zea mays clone EL01N0408C01 mRNA sequence Length = 1673 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 191 gcggcatgggcgccgctgctggtgg 215 ||||||| ||||||||||||||||| Sbjct: 1252 gcggcattggcgccgctgctggtgg 1228
>dbj|AK065583.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034G20, full insert sequence Length = 1505 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 gtggacgccggcaacaacaac 316 ||||||||||||||||||||| Sbjct: 183 gtggacgccggcaacaacaac 203
>gb|AY111758.1| Zea mays CL9639_1 mRNA sequence Length = 1119 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 191 gcggcatgggcgccgctgctggtgg 215 ||||||| ||||||||||||||||| Sbjct: 393 gcggcattggcgccgctgctggtgg 417
>gb|DQ327779.1| Drosophila melanogaster clone 135 mRNA sequence Length = 1302 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 cgccgctgctggtggtgctgc 221 ||||||||||||||||||||| Sbjct: 423 cgccgctgctggtggtgctgc 403
>gb|AE003797.3| Drosophila melanogaster chromosome 2R, section 53 of 73 of the complete sequence Length = 306854 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 gcaacaacaaccggctggcca 326 ||||||||||||||||||||| Sbjct: 30510 gcaacaacaaccggctggcca 30530
>gb|AE003508.4| Drosophila melanogaster chromosome X, section 60 of 74 of the complete sequence Length = 290619 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cgccgctgctggtggtgctgc 221 ||||||||||||||||||||| Sbjct: 155106 cgccgctgctggtggtgctgc 155126
>gb|AF072823.1|AF072823 Drosophila melanogaster unpaired protein mRNA, complete cds Length = 2221 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 cgccgctgctggtggtgctgc 221 ||||||||||||||||||||| Sbjct: 329 cgccgctgctggtggtgctgc 309
>gb|AC004322.1|AC004322 Drosophila melanogaster DNA sequence (P1 DS01962 (D216)), complete sequence Length = 32480 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 gcaacaacaaccggctggcca 326 ||||||||||||||||||||| Sbjct: 3449 gcaacaacaaccggctggcca 3469
>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence Length = 949626 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 gccgctgctggtggtgctgct 222 ||||||||||||||||||||| Sbjct: 212642 gccgctgctggtggtgctgct 212662
>ref|XM_475723.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1098 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 281 ttcggagactcggtggtggacgccggcaacaacaac 316 ||||| |||||| |||||||| ||||||||||||| Sbjct: 106 ttcggggactcgctggtggacaacggcaacaacaac 141
>ref|XM_476821.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1301 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 199 ggcgccgctgctggtggtgctgctctcggcggcggc 234 |||| |||||||| || ||||||| ||||||||||| Sbjct: 88 ggcggcgctgctgctgctgctgctgtcggcggcggc 123
>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04, complete sequence Length = 169073 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 281 ttcggagactcggtggtggacgccggcaacaacaac 316 ||||| |||||| |||||||| ||||||||||||| Sbjct: 980 ttcggggactcgctggtggacaacggcaacaacaac 945
>gb|DQ145223.1| Drosophila miranda neo-Y CG8181 gene, partial sequence Length = 1272 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 cgctgctggtggtgctgctc 223 |||||||||||||||||||| Sbjct: 641 cgctgctggtggtgctgctc 622
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 gggcgccgctgctggtggtg 217 |||||||||||||||||||| Sbjct: 4234811 gggcgccgctgctggtggtg 4234830
>ref|XM_958987.1| Neurospora crassa OR74A hypothetical protein (NCU00528.1) partial mRNA Length = 2286 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cgccgctgctggtggtgctg 220 |||||||||||||||||||| Sbjct: 154 cgccgctgctggtggtgctg 135
>ref|XM_324707.1| Neurospora crassa OR74A hypothetical protein (NCU00528.1) partial mRNA Length = 2286 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cgccgctgctggtggtgctg 220 |||||||||||||||||||| Sbjct: 154 cgccgctgctggtggtgctg 135
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 281 ttcggagactcggtggtggacgccggcaacaacaac 316 ||||| |||||| |||||||| ||||||||||||| Sbjct: 124932 ttcggggactcgctggtggacaacggcaacaacaac 124897
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 tggccgcgaccgcggcggca 196 |||||||||||||||||||| Sbjct: 2571647 tggccgcgaccgcggcggca 2571628
>ref|XM_846178.1| PREDICTED: Canis familiaris hypothetical protein LOC609000 (LOC609000), mRNA Length = 1326 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gctgctggtggtgctgctct 224 |||||||||||||||||||| Sbjct: 951 gctgctggtggtgctgctct 970
>emb|CT033771.1| Medicago truncatula chromosome 5 clone mth2-15i14, COMPLETE SEQUENCE Length = 116146 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 gggcgccgctgctggtggtg 217 |||||||||||||||||||| Sbjct: 10943 gggcgccgctgctggtggtg 10962
>emb|Z54206.1|BVH1LFT31 Bovine herpesvirus type 1 31-kb DNA (left genome end) Length = 31444 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 agatggccgcgaccgcggcg 193 |||||||||||||||||||| Sbjct: 18274 agatggccgcgaccgcggcg 18293
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 agatggccgcgaccgcggcg 193 |||||||||||||||||||| Sbjct: 18274 agatggccgcgaccgcggcg 18293
>ref|XM_804332.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511909.50) partial mRNA Length = 1209 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cgccgctgctggtggtgctg 220 |||||||||||||||||||| Sbjct: 207 cgccgctgctggtggtgctg 188
>emb|Z77659.1|CEF23B12 Caenorhabditis elegans Cosmid F23B12, complete sequence Length = 27797 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 cggttctcctccgaaaccac 107 |||||||||||||||||||| Sbjct: 20326 cggttctcctccgaaaccac 20307
>gb|AC142526.5| Medicago truncatula clone mth2-34h20, complete sequence Length = 113622 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 gggcgccgctgctggtggtg 217 |||||||||||||||||||| Sbjct: 96881 gggcgccgctgctggtggtg 96900
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 ccggcgcctggccggttctc 95 |||||||||||||||||||| Sbjct: 2747338 ccggcgcctggccggttctc 2747319
>gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, complete sequence Length = 167588 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 281 ttcggagactcggtggtggacgccggcaacaacaac 316 ||||| |||||| | || |||||||||||||||||| Sbjct: 99857 ttcggtgactcgctcgtcgacgccggcaacaacaac 99822
>ref|XM_968594.1| PREDICTED: Tribolium castaneum similar to CG17838-PE, isoform E (LOC662503), mRNA Length = 2556 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gccggcaacaacaaccggctggcc 325 ||||||||| |||||||||||||| Sbjct: 1577 gccggcaaccacaaccggctggcc 1600
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 tgccggtgccggtcgaagcg 140 |||||||||||||||||||| Sbjct: 1625171 tgccggtgccggtcgaagcg 1625190
>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13 Length = 244800 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 gggcgccgctgctggtggtg 217 |||||||||||||||||||| Sbjct: 75766 gggcgccgctgctggtggtg 75785
>emb|BX294156.1| Pirellula sp. strain 1 complete genome; segment 24/24 Length = 179576 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 tcggcggcggcaacgcggct 243 |||||||||||||||||||| Sbjct: 10719 tcggcggcggcaacgcggct 10700
>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 14/14 Length = 278492 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 gggcgccgctgctggtggtg 217 |||||||||||||||||||| Sbjct: 111793 gggcgccgctgctggtggtg 111812
>gb|AE012435.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 343 of 460 of the complete genome Length = 11282 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 ccaccggccgcgcgcgtctg 28 |||||||||||||||||||| Sbjct: 598 ccaccggccgcgcgcgtctg 617
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 gcgaccgcggcggcatgggcgccg 205 |||||||| ||||||||||||||| Sbjct: 2384578 gcgaccgccgcggcatgggcgccg 2384555
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ccaccggccgcgcgcgtctg 28 |||||||||||||||||||| Sbjct: 1181715 ccaccggccgcgcgcgtctg 1181696
>ref|NM_074179.2| Caenorhabditis elegans Temporarily Assigned Gene name family member (tag-114) (tag-114) mRNA, complete cds Length = 1375 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 cggttctcctccgaaaccac 107 |||||||||||||||||||| Sbjct: 739 cggttctcctccgaaaccac 720
>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence Length = 158050 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 cggtggtggacgccggcaac 310 |||||||||||||||||||| Sbjct: 155817 cggtggtggacgccggcaac 155798
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 atggccgcgaccgcggcggc 195 |||||||||||||||||||| Sbjct: 602819 atggccgcgaccgcggcggc 602800
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 281 ttcggagactcggtggtggacgccggcaacaacaac 316 ||||| |||||| ||| |||||||||||||||||| Sbjct: 2405758 ttcggggactcgacggtcgacgccggcaacaacaac 2405793
>ref|XM_624628.1| PREDICTED: Apis mellifera similar to CG11081-PA, isoform A (LOC552252), mRNA Length = 1407 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 cgctgctggtggtgctgctctcgg 227 |||||||||||||| ||||||||| Sbjct: 1042 cgctgctggtggtgttgctctcgg 1019
>gb|AF317662.1|AF317662 Candida albicans 60S acidic ribosomal protein type P2-B (p2B) gene, complete cds Length = 481 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 gccgctgctggtggtgctgc 221 |||||||||||||||||||| Sbjct: 248 gccgctgctggtggtgctgc 267
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gctgctggtggtgctgctct 224 |||||||||||||||||||| Sbjct: 6240729 gctgctggtggtgctgctct 6240748
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 accggctggccacgctggtg 334 |||||||||||||||||||| Sbjct: 3180036 accggctggccacgctggtg 3180055
>gb|AY052397.1| Bovine herpesvirus 1 glycoprotein C gene, partial cds Length = 845 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 agatggccgcgaccgcggcg 193 |||||||||||||||||||| Sbjct: 28 agatggccgcgaccgcggcg 9
>dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0095O23 Length = 159792 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 281 ttcggagactcggtggtggacgccggcaacaacaac 316 ||||| |||||| ||| |||||||||||||||||| Sbjct: 84168 ttcggggactcgacggtcgacgccggcaacaacaac 84203
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 acccacaccaccggccgcgc 21 |||||||||||||||||||| Sbjct: 4484363 acccacaccaccggccgcgc 4484382
>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534H07 Length = 144689 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 199 ggcgccgctgctggtggtgctgctctcggcggcggc 234 |||| |||||||| || ||||||| ||||||||||| Sbjct: 55776 ggcggcgctgctgctgctgctgctgtcggcggcggc 55741
>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0060O16 Length = 164373 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 cggtggtggacgccggcaac 310 |||||||||||||||||||| Sbjct: 4159 cggtggtggacgccggcaac 4178
>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0680A05 Length = 168092 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 cggtggtggacgccggcaac 310 |||||||||||||||||||| Sbjct: 96782 cggtggtggacgccggcaac 96801
>dbj|AK062887.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-D11, full insert sequence Length = 1302 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 199 ggcgccgctgctggtggtgctgctctcggcggcggc 234 |||| |||||||| || ||||||| ||||||||||| Sbjct: 88 ggcggcgctgctgctgctgctgctgtcggcggcggc 123
>dbj|AK061147.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-D08, full insert sequence Length = 1315 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 281 ttcggagactcggtggtggacgccggcaacaacaac 316 ||||| |||||| |||||||| ||||||||||||| Sbjct: 170 ttcggggactcgctggtggacaacggcaacaacaac 205
>dbj|AK061026.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-F09, full insert sequence Length = 1248 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 281 ttcggagactcggtggtggacgccggcaacaacaac 316 ||||| |||||| ||| |||||||||||||||||| Sbjct: 127 ttcggggactcgacggtcgacgccggcaacaacaac 162
>dbj|AK060625.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-G08, full insert sequence Length = 1443 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 281 ttcggagactcggtggtggacgccggcaacaacaac 316 ||||| |||||| | || |||||||||||||||||| Sbjct: 289 ttcggtgactcgctcgtcgacgccggcaacaacaac 324
>dbj|AK060124.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-H03, full insert sequence Length = 1077 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 281 ttcggagactcggtggtggacgccggcaacaacaac 316 ||||| |||||| ||| |||||||||||||||||| Sbjct: 127 ttcggggactcgacggtcgacgccggcaacaacaac 162
>emb|AM110698.1| Propionibacterium freudenreichii subsp. freudenreichii proW for ABC-type glycine betaine transport protein Length = 1045 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gccgctgctggtggtgctgc 221 |||||||||||||||||||| Sbjct: 503 gccgctgctggtggtgctgc 484
>gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042B10, from chromosome 3, complete sequence Length = 144205 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 281 ttcggagactcggtggtggacgccggcaacaacaac 316 ||||| |||||| | || |||||||||||||||||| Sbjct: 76750 ttcggtgactcgctcgtcgacgccggcaacaacaac 76785
>gb|U68480.1|MTU68480 Mycobacterium tuberculosis putative arabinosyl transferase (embC, embA and embB) genes, complete cds Length = 10249 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 gggcgccgctgctggtggtg 217 |||||||||||||||||||| Sbjct: 2940 gggcgccgctgctggtggtg 2959
>gb|AD000012.1|MSGY126 Mycobacterium tuberculosis sequence from clone y126 Length = 37164 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 gggcgccgctgctggtggtg 217 |||||||||||||||||||| Sbjct: 29142 gggcgccgctgctggtggtg 29161
>gb|AF440523.1| Pseudomonas aeruginosa strain C genomic sequence, gene island PAGI-2(C) Length = 158230 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 tggccgcgaccgcggcggca 196 |||||||||||||||||||| Sbjct: 69223 tggccgcgaccgcggcggca 69242
>gb|M27491.1|HSBGPG3A Bovine herpesvirus type 1 glycoprotein gIII gene, complete cds Length = 1829 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 agatggccgcgaccgcggcg 193 |||||||||||||||||||| Sbjct: 95 agatggccgcgaccgcggcg 76
>dbj|AB069723.1| Rhizobium sp. AC100 plasmid pAC200 transposon Tnceh, complete sequence Length = 10525 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ggcggcatgggcgccgctgc 209 |||||||||||||||||||| Sbjct: 2933 ggcggcatgggcgccgctgc 2952 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,433,363 Number of Sequences: 3902068 Number of extensions: 2433363 Number of successful extensions: 59051 Number of sequences better than 10.0: 137 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 55788 Number of HSP's gapped (non-prelim): 3263 length of query: 383 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 361 effective length of database: 17,147,199,772 effective search space: 6190139117692 effective search space used: 6190139117692 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
