>POLG_LIV (P22338) Genome polyprotein [Contains: Capsid protein C (Core|
           protein); Envelope protein M (Matrix protein); Major
           envelope protein E; Nonstructural protein 1 (NS1)]
           (Fragment)
          Length = 980

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 23/86 (26%), Positives = 35/86 (40%)
 Frame = -1

Query: 303 PRREK*NTATREARPRMWYTNSPLHAAIVCCLCGVLGELFAVLARGEERHSEWGMEPLLQ 124
           PRR    TAT+  +PR+   N      ++  + G+L    A  AR     + W   PL Q
Sbjct: 15  PRRVSKETATKTRQPRVQMPN----GLVLMRMMGILWHAVAGTARNPALKAFWNSVPLRQ 70

Query: 123 EGGSEVGVGRTSGVGCLGWEAAAVRR 46
              +   + RT     +G +    RR
Sbjct: 71  ATAALRKIKRTVSALMVGLQRRGKRR 96

>POLG_TBEVW (P14336) Genome polyprotein [Contains: Capsid protein C (Core|
           protein); Envelope protein M (Matrix protein); Major
           envelope protein E; Nonstructural protein 1 (NS1);
           Nonstructural protein 2A (NS2A); Flavivirin protease
           NS2B regulatory subunit;
          Length = 3414

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 26/100 (26%), Positives = 39/100 (39%)
 Frame = -1

Query: 303 PRREK*NTATREARPRMWYTNSPLHAAIVCCLCGVLGELFAVLARGEERHSEWGMEPLLQ 124
           PRR    TAT+  +PR+   N      ++  + G+L    A  AR     + W   PL Q
Sbjct: 15  PRRVSKETATKTRQPRVQMPN----GLVLMRMMGILWHAVAGTARNPVLKAFWNSVPLKQ 70

Query: 123 EGGSEVGVGRTSGVGCLGWEAAAVRRDRVMQEGDLHTVTL 4
              +   + RT     +G +    RR        L  +TL
Sbjct: 71  ATAALRKIKRTVSALMVGLQKRGKRRSATDWMSWLLVITL 110

>POLG_TBEVH (Q01299) Genome polyprotein [Contains: Capsid protein C (Core|
           protein); Envelope protein M (Matrix protein); Major
           envelope protein E; Nonstructural protein 1 (NS1);
           Nonstructural protein 2A (NS2A); Flavivirin protease
           NS2B regulatory subunit;
          Length = 3414

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 26/100 (26%), Positives = 39/100 (39%)
 Frame = -1

Query: 303 PRREK*NTATREARPRMWYTNSPLHAAIVCCLCGVLGELFAVLARGEERHSEWGMEPLLQ 124
           PRR    TAT+  +PR+   N      ++  + G+L    A  AR     + W   PL Q
Sbjct: 15  PRRVSKETATKTRQPRVQMPN----GLVLMRMMGILWHAVAGTARNPVLKAFWNSVPLKQ 70

Query: 123 EGGSEVGVGRTSGVGCLGWEAAAVRRDRVMQEGDLHTVTL 4
              +   + RT     +G +    RR        L  +TL
Sbjct: 71  ATAALRKIKRTVSALMVGLQKRGKRRSATDWMSWLLVITL 110

>ERYA2_SACER (Q03132) Erythronolide synthase, modules 3 and 4 (EC 2.3.1.94) (ORF|
           2) (6-deoxyerythronolide B synthase II) (DEBS 2)
          Length = 3566

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
 Frame = -1

Query: 189 LFAVLARGEERHSEWGMEPLLQEGGSEVGVGRTSGVGCLGWEAAA---VRRDRVMQ---- 31
           LFAV+    E    +G+EP    G S+  +      G L  E AA   V R R+M+    
Sbjct: 625 LFAVMVSLAELWRSYGVEPAAVVGHSQGEIAAAHVAGALTLEDAAKLVVGRSRLMRSLSG 684

Query: 30  EGDLHTVTLG 1
           EG +  V LG
Sbjct: 685 EGGMAAVALG 694

>T1S_SALPO (P07990) Type I restriction enzyme StySPI specificity protein (S|
           protein) (S.StySPI)
          Length = 463

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -3

Query: 223 HCLLPVRCSWGAFCGA 176
           H  LP  CS+GAFCGA
Sbjct: 95  HQRLPFECSFGAFCGA 110

>K6PF1_YARLI (P59680) 6-phosphofructokinase alpha subunit (EC 2.7.1.11)|
           (Phosphofructokinase 1) (Phosphohexokinase) (6PF-1-K
           alpha subunit)
          Length = 953

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 27/93 (29%)
 Frame = -1

Query: 237 PLHAAIVCCLCGVLGELFAV-------LARGEER---HSEWG-----------------M 139
           PL  AIVC      G   A+       LARG +    H+ W                  +
Sbjct: 571 PLRVAIVCTGAPAGGMNAAIRSAVLYGLARGHQMFAIHNGWSGLVKNGDDAVRELTWLEV 630

Query: 138 EPLLQEGGSEVGVGRTSGVGCLGWEAAAVRRDR 40
           EPL Q+GG E+G  R+     LG  A   +R R
Sbjct: 631 EPLCQKGGCEIGTNRSLPECDLGMIAYHFQRQR 663

>DXS_SYNPX (Q7U6P6) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7)|
           (1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
           (DXPS)
          Length = 643

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = -1

Query: 186 FAVLARGEERHSEWGMEPLLQ-EGGSEVGVGRTSGVGCL----GWEAAAVRRDRVMQEGD 22
           F V+A  +E   +  +   L  +G + + + R SGVG      GWEA  + R  +++EGD
Sbjct: 446 FTVMAPKDEAELQRMLVTCLNHDGPTALRIPRGSGVGMPLMEEGWEALPIGRGELLREGD 505


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,585,732
Number of Sequences: 219361
Number of extensions: 669034
Number of successful extensions: 1992
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1992
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)