ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast14d05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009289.1| Triticum aestivum clone wlm0.pk0023.h3:fis, full ... 410 e-111
2emb|AL662938.3|OSJN00138 Oryza sativa genomic DNA, chromosome 4,... 240 2e-60
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 240 2e-60
4emb|AL512542.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 240 2e-60
5emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4,... 240 2e-60
6dbj|AB001883.1| Oryza sativa (japonica cultivar-group) mRNA for ... 240 2e-60
7ref|XM_473004.1| Oryza sativa (japonica cultivar-group), predic... 234 1e-58
8gb|AY109441.1| Zea mays CL359_1 mRNA sequence 220 2e-54
9ref|XM_466630.1| Oryza sativa (japonica cultivar-group), mRNA 147 2e-32
10ref|XM_506858.1| PREDICTED Oryza sativa (japonica cultivar-group... 147 2e-32
11dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 147 2e-32
12dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic D... 147 2e-32
13dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic D... 147 2e-32
14dbj|AK104293.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 2e-32
15dbj|AK061044.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 2e-32
16dbj|AB001885.1| Oryza sativa (japonica cultivar-group) mRNA for ... 147 2e-32
17ref|XM_550653.1| Oryza sativa (japonica cultivar-group), mRNA 82 1e-12
18dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 82 1e-12
19dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic D... 82 1e-12
20dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic D... 82 1e-12
21dbj|AK104083.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 1e-12
22dbj|AK072231.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 1e-12
23dbj|AB001886.1| Oryza sativa (japonica cultivar-group) mRNA for ... 82 1e-12
24gb|AC135920.2| Oryza sativa (japonica cultivar-group) chromosome... 64 3e-07
25dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 64 3e-07
26dbj|AK106865.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 3e-07
27ref|NM_188312.1| Oryza sativa (japonica cultivar-group), predic... 48 0.016
28ref|XM_475953.1| Oryza sativa (japonica cultivar-group), predic... 48 0.016
29gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.016
30dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.016
31dbj|AP003105.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.016
32dbj|AK105906.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.016
33dbj|AP004513.1| Lotus japonicus genomic DNA, chromosome 5, clone... 48 0.016
34gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.016
35ref|NM_100484.3| Arabidopsis thaliana STO (SALT TOLERANCE); tran... 46 0.063
36ref|NM_179267.2| Arabidopsis thaliana STO (SALT TOLERANCE); tran... 46 0.063
37gb|AY079377.1| Arabidopsis thaliana putative salt-tolerance prot... 46 0.063
38gb|AY045794.1| Arabidopsis thaliana putative salt-tolerance prot... 46 0.063
39emb|X95572.1|ATSTO A.thaliana mRNA for salt-tolerance protein 46 0.063
40emb|BX817822.1|CNS0AEFO Arabidopsis thaliana Full-length cDNA Co... 46 0.063
41emb|BX816034.1|CNS0AD7C Arabidopsis thaliana Full-length cDNA Co... 46 0.063
42emb|BX815485.1|CNS0ACZA Arabidopsis thaliana Full-length cDNA Co... 46 0.063
43emb|BX814784.1|CNS0AAR4 Arabidopsis thaliana Full-length cDNA Co... 46 0.063
44gb|AC024174.2|T21E18 Sequence of BAC T21E18 from Arabidopsis tha... 46 0.063
45emb|AJ585192.1| Streptomyces resistomycificus remA-R gene cluster 44 0.25
46gb|AF052585.1|AF052585 Malus domestica cultivar Fuji CONSTANS-li... 44 0.25
47gb|DQ234265.1| Glycine max salt-tolerance protein mRNA, complete... 42 0.98
48gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 0.98
49gb|AC161371.4| Mus musculus BAC clone RP23-402N3 from chromosome... 42 0.98
50emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 0.98
51gb|CP000264.1| Jannaschia sp. CCS1, complete genome 42 0.98
52dbj|AK069785.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.98
53gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 3.9
54gb|AC145378.2| Pan troglodytes BAC clone RP43-56P12 from 7, comp... 40 3.9
55emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete ch... 40 3.9
56gb|AC003073.2| Homo sapiens PAC clone RP4-531J23 from 7, complet... 40 3.9
57gb|AC101883.6| Mus musculus chromosome 1, clone RP23-402F17, com... 40 3.9
58gb|AC145783.1| Pan troglodytes BAC clone RP43-27O9 from 7, compl... 40 3.9
59gb|AY330485.1| Saccharopolyspora erythraea amino acid permease g... 40 3.9
60emb|AL954342.10| Human DNA sequence from clone RP11-343L13 on ch... 40 3.9
61dbj|AB222675.1| Uncultured bacterium gene for chitinase, partial... 40 3.9
62gb|AE011675.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 3.9
63gb|AF336797.2|AF336797 Homo sapiens small-conductance calcium-ac... 40 3.9
64gb|AC154310.2| Mus musculus BAC clone RP23-358E14 from chromosom... 40 3.9
65gb|AY830922.1| Pisum sativum CONSTANS-LIKE b (COLb) mRNA, comple... 40 3.9
66dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 40 3.9
67emb|AJ250131.1|ASP250131 Nostoc sp. PCC 7120 hepB gene 40 3.9
68gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 3.9
69gb|AC174763.1| Gasterosteus aculeatus clone VMRC28-119C03, compl... 40 3.9
70emb|CT009728.8| Mouse DNA sequence from clone RP23-57I20 on chro... 40 3.9
71dbj|AP003071.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 3.9
72gb|U68035.1|ASU68035 Anabaena sp. strain PCC 7120 HepB (hepB) ge... 40 3.9 
>gb|BT009289.1| Triticum aestivum clone wlm0.pk0023.h3:fis, full insert mRNA
           sequence
          Length = 1225

 Score =  410 bits (207), Expect = e-111
 Identities = 240/247 (97%), Gaps = 3/247 (1%)
 Strand = Plus / Plus

                                                                       
Query: 50  cttatctcttctccggctcaagcctagcaaa-gcgctctccggccagcgagaaagcaaga 108
           |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 8   cttatctcttctccggctca-gcctagcaaaagcgctctccggccagcgagaaagcaaga 66

                                                                       
Query: 109 aaagcagaggcatgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgt 168
           |  || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 67  ag-gcggaggcatgaagatccagtgcgactcgtgcggcgtcgcggcggccacggtggtgt 125

                                                                       
Query: 169 gctgcgcggacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaaca 228
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 126 gctgcgcggacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgctaaca 185

                                                                       
Query: 229 agctcgccagcaagcaccagaggctcccgctcgacgcgctcggcgccaagctcccgcgct 288
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 agctcgccagcaagcaccagaggctcccgctcgacgcgctcggcgccaagctcccgcgct 245

                  
Query: 289 gcgacat 295
           |||||||
Sbjct: 246 gcgacat 252
to top
>emb|AL662938.3|OSJN00138 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ990528_30,
             complete sequence
          Length = 88547

 Score =  240 bits (121), Expect = 2e-60
 Identities = 142/149 (95%)
 Strand = Plus / Minus

                                                                         
Query: 117   ggcatgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcg 176
             ||||||| ||||||||||||| |||||| || ||||||||||||||||||||||||||||
Sbjct: 79597 ggcatgaggatccagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcg 79538

                                                                         
Query: 177   gacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgcc 236
             |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 79537 gacgaggcggcgctgtgcgcgcgctgcgacgtcgagatccacgccgccaacaagctcgcc 79478

                                          
Query: 237   agcaagcaccagaggctcccgctcgacgc 265
             |||||||||||| | ||||||||||||||
Sbjct: 79477 agcaagcaccagcgcctcccgctcgacgc 79449
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  240 bits (121), Expect = 2e-60
 Identities = 142/149 (95%)
 Strand = Plus / Minus

                                                                            
Query: 117      ggcatgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcg 176
                ||||||| ||||||||||||| |||||| || ||||||||||||||||||||||||||||
Sbjct: 24624452 ggcatgaggatccagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcg 24624393

                                                                            
Query: 177      gacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgcc 236
                |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 24624392 gacgaggcggcgctgtgcgcgcgctgcgacgtcgagatccacgccgccaacaagctcgcc 24624333

                                             
Query: 237      agcaagcaccagaggctcccgctcgacgc 265
                |||||||||||| | ||||||||||||||
Sbjct: 24624332 agcaagcaccagcgcctcccgctcgacgc 24624304
to top
>emb|AL512542.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0522A01, complete
             sequence
          Length = 97077

 Score =  240 bits (121), Expect = 2e-60
 Identities = 142/149 (95%)
 Strand = Plus / Minus

                                                                         
Query: 117   ggcatgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcg 176
             ||||||| ||||||||||||| |||||| || ||||||||||||||||||||||||||||
Sbjct: 63246 ggcatgaggatccagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcg 63187

                                                                         
Query: 177   gacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgcc 236
             |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 63186 gacgaggcggcgctgtgcgcgcgctgcgacgtcgagatccacgccgccaacaagctcgcc 63127

                                          
Query: 237   agcaagcaccagaggctcccgctcgacgc 265
             |||||||||||| | ||||||||||||||
Sbjct: 63126 agcaagcaccagcgcctcccgctcgacgc 63098
to top
>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11,
             complete sequence
          Length = 133856

 Score =  240 bits (121), Expect = 2e-60
 Identities = 142/149 (95%)
 Strand = Plus / Minus

                                                                         
Query: 117   ggcatgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcg 176
             ||||||| ||||||||||||| |||||| || ||||||||||||||||||||||||||||
Sbjct: 13975 ggcatgaggatccagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcg 13916

                                                                         
Query: 177   gacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgcc 236
             |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 13915 gacgaggcggcgctgtgcgcgcgctgcgacgtcgagatccacgccgccaacaagctcgcc 13856

                                          
Query: 237   agcaagcaccagaggctcccgctcgacgc 265
             |||||||||||| | ||||||||||||||
Sbjct: 13855 agcaagcaccagcgcctcccgctcgacgc 13827
to top
>dbj|AB001883.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger
           protein, complete cds, clone:E10707
          Length = 987

 Score =  240 bits (121), Expect = 2e-60
 Identities = 142/149 (95%)
 Strand = Plus / Plus

                                                                       
Query: 117 ggcatgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcg 176
           ||||||| ||||||||||||| |||||| || ||||||||||||||||||||||||||||
Sbjct: 20  ggcatgaggatccagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcg 79

                                                                       
Query: 177 gacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgcc 236
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 80  gacgaggcggcgctgtgcgcgcgctgcgacgtcgagatccacgccgccaacaagctcgcc 139

                                        
Query: 237 agcaagcaccagaggctcccgctcgacgc 265
           |||||||||||| | ||||||||||||||
Sbjct: 140 agcaagcaccagcgcctcccgctcgacgc 168
to top
>ref|XM_473004.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 774

 Score =  234 bits (118), Expect = 1e-58
 Identities = 139/146 (95%)
 Strand = Plus / Plus

                                                                       
Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179
           |||| ||||||||||||| |||||| || |||||||||||||||||||||||||||||||
Sbjct: 1   atgaggatccagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcggac 60

                                                                       
Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61  gaggcggcgctgtgcgcgcgctgcgacgtcgagatccacgccgccaacaagctcgccagc 120

                                     
Query: 240 aagcaccagaggctcccgctcgacgc 265
           ||||||||| | ||||||||||||||
Sbjct: 121 aagcaccagcgcctcccgctcgacgc 146
to top
>gb|AY109441.1| Zea mays CL359_1 mRNA sequence
          Length = 1551

 Score =  220 bits (111), Expect = 2e-54
 Identities = 159/175 (90%)
 Strand = Plus / Plus

                                                                       
Query: 119 catgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcgga 178
           ||||||||||||||||||| |||||| || |||||| ||||| |||||||||||||| ||
Sbjct: 93  catgaagatccagtgcgacgcgtgcgagggcgcggctgccaccgtggtgtgctgcgccga 152

                                                                       
Query: 179 cgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccag 238
           |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 153 cgaggccgcgctgtgcgcgcgctgcgacgtcgagatccacgccgccaacaagctcgccag 212

                                                                  
Query: 239 caagcaccagaggctcccgctcgacgcgctcggcgccaagctcccgcgctgcgac 293
           |||||||||| | ||||||||||| || |||  |||||  |||||||||||||||
Sbjct: 213 caagcaccagcgcctcccgctcgaggctctctccgccagcctcccgcgctgcgac 267
to top
>ref|XM_466630.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1065

 Score =  147 bits (74), Expect = 2e-32
 Identities = 149/174 (85%)
 Strand = Plus / Plus

                                                                       
Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179
           |||||||||||||||||| |||||| |  |||||||||  ||||||||||||||||||||
Sbjct: 125 atgaagatccagtgcgacgcgtgcgagagcgcggcggcggcggtggtgtgctgcgcggac 184

                                                                       
Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239
           ||||||||||||||||||   |||||||||||| | ||||| || |||||||| ||| | 
Sbjct: 185 gaggcggcgctgtgcgcggcgtgcgacgtggaggtgcacgcggcgaacaagctggccggg 244

                                                                 
Query: 240 aagcaccagaggctcccgctcgacgcgctcggcgccaagctcccgcgctgcgac 293
           ||||||||| |||| ||||| || ||||||   || | ||||||||||||||||
Sbjct: 245 aagcaccagcggctgccgctggaggcgctctcggcgaggctcccgcgctgcgac 298
to top
>ref|XM_506858.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1058_F07.25
           mRNA
          Length = 1078

 Score =  147 bits (74), Expect = 2e-32
 Identities = 149/174 (85%)
 Strand = Plus / Plus

                                                                       
Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179
           |||||||||||||||||| |||||| |  |||||||||  ||||||||||||||||||||
Sbjct: 125 atgaagatccagtgcgacgcgtgcgagagcgcggcggcggcggtggtgtgctgcgcggac 184

                                                                       
Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239
           ||||||||||||||||||   |||||||||||| | ||||| || |||||||| ||| | 
Sbjct: 185 gaggcggcgctgtgcgcggcgtgcgacgtggaggtgcacgcggcgaacaagctggccggg 244

                                                                 
Query: 240 aagcaccagaggctcccgctcgacgcgctcggcgccaagctcccgcgctgcgac 293
           ||||||||| |||| ||||| || ||||||   || | ||||||||||||||||
Sbjct: 245 aagcaccagcggctgccgctggaggcgctctcggcgaggctcccgcgctgcgac 298
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  147 bits (74), Expect = 2e-32
 Identities = 149/174 (85%)
 Strand = Plus / Plus

                                                                            
Query: 120      atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179
                |||||||||||||||||| |||||| |  |||||||||  ||||||||||||||||||||
Sbjct: 23778769 atgaagatccagtgcgacgcgtgcgagagcgcggcggcggcggtggtgtgctgcgcggac 23778828

                                                                            
Query: 180      gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239
                ||||||||||||||||||   |||||||||||| | ||||| || |||||||| ||| | 
Sbjct: 23778829 gaggcggcgctgtgcgcggcgtgcgacgtggaggtgcacgcggcgaacaagctggccggg 23778888

                                                                      
Query: 240      aagcaccagaggctcccgctcgacgcgctcggcgccaagctcccgcgctgcgac 293
                ||||||||| |||| ||||| || ||||||   || | ||||||||||||||||
Sbjct: 23778889 aagcaccagcggctgccgctggaggcgctctcggcgaggctcccgcgctgcgac 23778942
to top
>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
           BAC clone:OSJNBa0030C08
          Length = 163423

 Score =  147 bits (74), Expect = 2e-32
 Identities = 149/174 (85%)
 Strand = Plus / Plus

                                                                       
Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179
           |||||||||||||||||| |||||| |  |||||||||  ||||||||||||||||||||
Sbjct: 435 atgaagatccagtgcgacgcgtgcgagagcgcggcggcggcggtggtgtgctgcgcggac 494

                                                                       
Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239
           ||||||||||||||||||   |||||||||||| | ||||| || |||||||| ||| | 
Sbjct: 495 gaggcggcgctgtgcgcggcgtgcgacgtggaggtgcacgcggcgaacaagctggccggg 554

                                                                 
Query: 240 aagcaccagaggctcccgctcgacgcgctcggcgccaagctcccgcgctgcgac 293
           ||||||||| |||| ||||| || ||||||   || | ||||||||||||||||
Sbjct: 555 aagcaccagcggctgccgctggaggcgctctcggcgaggctcccgcgctgcgac 608
to top
>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1058_F07
          Length = 95841

 Score =  147 bits (74), Expect = 2e-32
 Identities = 149/174 (85%)
 Strand = Plus / Plus

                                                                         
Query: 120   atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179
             |||||||||||||||||| |||||| |  |||||||||  ||||||||||||||||||||
Sbjct: 89353 atgaagatccagtgcgacgcgtgcgagagcgcggcggcggcggtggtgtgctgcgcggac 89412

                                                                         
Query: 180   gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239
             ||||||||||||||||||   |||||||||||| | ||||| || |||||||| ||| | 
Sbjct: 89413 gaggcggcgctgtgcgcggcgtgcgacgtggaggtgcacgcggcgaacaagctggccggg 89472

                                                                   
Query: 240   aagcaccagaggctcccgctcgacgcgctcggcgccaagctcccgcgctgcgac 293
             ||||||||| |||| ||||| || ||||||   || | ||||||||||||||||
Sbjct: 89473 aagcaccagcggctgccgctggaggcgctctcggcgaggctcccgcgctgcgac 89526
to top
>dbj|AK104293.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G06, full
           insert sequence
          Length = 1065

 Score =  147 bits (74), Expect = 2e-32
 Identities = 149/174 (85%)
 Strand = Plus / Plus

                                                                       
Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179
           |||||||||||||||||| |||||| |  |||||||||  ||||||||||||||||||||
Sbjct: 125 atgaagatccagtgcgacgcgtgcgagagcgcggcggcggcggtggtgtgctgcgcggac 184

                                                                       
Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239
           ||||||||||||||||||   |||||||||||| | ||||| || |||||||| ||| | 
Sbjct: 185 gaggcggcgctgtgcgcggcgtgcgacgtggaggtgcacgcggcgaacaagctggccggg 244

                                                                 
Query: 240 aagcaccagaggctcccgctcgacgcgctcggcgccaagctcccgcgctgcgac 293
           ||||||||| |||| ||||| || ||||||   || | ||||||||||||||||
Sbjct: 245 aagcaccagcggctgccgctggaggcgctctcggcgaggctcccgcgctgcgac 298
to top
>dbj|AK061044.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-E01, full
           insert sequence
          Length = 1078

 Score =  147 bits (74), Expect = 2e-32
 Identities = 149/174 (85%)
 Strand = Plus / Plus

                                                                       
Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179
           |||||||||||||||||| |||||| |  |||||||||  ||||||||||||||||||||
Sbjct: 125 atgaagatccagtgcgacgcgtgcgagagcgcggcggcggcggtggtgtgctgcgcggac 184

                                                                       
Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239
           ||||||||||||||||||   |||||||||||| | ||||| || |||||||| ||| | 
Sbjct: 185 gaggcggcgctgtgcgcggcgtgcgacgtggaggtgcacgcggcgaacaagctggccggg 244

                                                                 
Query: 240 aagcaccagaggctcccgctcgacgcgctcggcgccaagctcccgcgctgcgac 293
           ||||||||| |||| ||||| || ||||||   || | ||||||||||||||||
Sbjct: 245 aagcaccagcggctgccgctggaggcgctctcggcgaggctcccgcgctgcgac 298
to top
>dbj|AB001885.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger
           protein, complete cds, clone:R1577
          Length = 1197

 Score =  147 bits (74), Expect = 2e-32
 Identities = 149/174 (85%)
 Strand = Plus / Plus

                                                                       
Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179
           |||||||||||||||||| |||||| |  |||||||||  ||||||||||||||||||||
Sbjct: 120 atgaagatccagtgcgacgcgtgcgagagcgcggcggcggcggtggtgtgctgcgcggac 179

                                                                       
Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239
           ||||||||||||||||||   |||||||||||| | ||||| || |||||||| ||| | 
Sbjct: 180 gaggcggcgctgtgcgcggcgtgcgacgtggaggtgcacgcggcgaacaagctggccggg 239

                                                                 
Query: 240 aagcaccagaggctcccgctcgacgcgctcggcgccaagctcccgcgctgcgac 293
           ||||||||| |||| ||||| || ||||||   || | ||||||||||||||||
Sbjct: 240 aagcaccagcggctgccgctggaggcgctctcggcgaggctcccgcgctgcgac 293
to top
>ref|XM_550653.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1339

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 107/129 (82%)
 Strand = Plus / Plus

                                                                       
Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179
           ||||||||||||||| || ||||||| |  |||| |||   |||| |||||||||| |||
Sbjct: 63  atgaagatccagtgcaacgcgtgcggcgcggcggaggcgcgggtgctgtgctgcgccgac 122

                                                                       
Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239
           ||||| ||||| ||| ||   ||||||| |||| | ||||||||||||||||||||| | 
Sbjct: 123 gaggcagcgctctgcacggcgtgcgacgaggaggtgcacgccgccaacaagctcgccggg 182

                    
Query: 240 aagcaccag 248
           |||||||||
Sbjct: 183 aagcaccag 191
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 107/129 (82%)
 Strand = Plus / Plus

                                                                           
Query: 120     atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179
               ||||||||||||||| || ||||||| |  |||| |||   |||| |||||||||| |||
Sbjct: 2694546 atgaagatccagtgcaacgcgtgcggcgcggcggaggcgcgggtgctgtgctgcgccgac 2694605

                                                                           
Query: 180     gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239
               ||||| ||||| ||| ||   ||||||| |||| | ||||||||||||||||||||| | 
Sbjct: 2694606 gaggcagcgctctgcacggcgtgcgacgaggaggtgcacgccgccaacaagctcgccggg 2694665

                        
Query: 240     aagcaccag 248
               |||||||||
Sbjct: 2694666 aagcaccag 2694674
to top
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0710H01
          Length = 187107

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 107/129 (82%)
 Strand = Plus / Plus

                                                                          
Query: 120    atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179
              ||||||||||||||| || ||||||| |  |||| |||   |||| |||||||||| |||
Sbjct: 149887 atgaagatccagtgcaacgcgtgcggcgcggcggaggcgcgggtgctgtgctgcgccgac 149946

                                                                          
Query: 180    gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239
              ||||| ||||| ||| ||   ||||||| |||| | ||||||||||||||||||||| | 
Sbjct: 149947 gaggcagcgctctgcacggcgtgcgacgaggaggtgcacgccgccaacaagctcgccggg 150006

                       
Query: 240    aagcaccag 248
              |||||||||
Sbjct: 150007 aagcaccag 150015
to top
>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0529C07
          Length = 174011

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 107/129 (82%)
 Strand = Plus / Plus

                                                                          
Query: 120    atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179
              ||||||||||||||| || ||||||| |  |||| |||   |||| |||||||||| |||
Sbjct: 106293 atgaagatccagtgcaacgcgtgcggcgcggcggaggcgcgggtgctgtgctgcgccgac 106352

                                                                          
Query: 180    gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239
              ||||| ||||| ||| ||   ||||||| |||| | ||||||||||||||||||||| | 
Sbjct: 106353 gaggcagcgctctgcacggcgtgcgacgaggaggtgcacgccgccaacaagctcgccggg 106412

                       
Query: 240    aagcaccag 248
              |||||||||
Sbjct: 106413 aagcaccag 106421
to top
>dbj|AK104083.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-D01, full
           insert sequence
          Length = 1339

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 107/129 (82%)
 Strand = Plus / Plus

                                                                       
Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179
           ||||||||||||||| || ||||||| |  |||| |||   |||| |||||||||| |||
Sbjct: 63  atgaagatccagtgcaacgcgtgcggcgcggcggaggcgcgggtgctgtgctgcgccgac 122

                                                                       
Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239
           ||||| ||||| ||| ||   ||||||| |||| | ||||||||||||||||||||| | 
Sbjct: 123 gaggcagcgctctgcacggcgtgcgacgaggaggtgcacgccgccaacaagctcgccggg 182

                    
Query: 240 aagcaccag 248
           |||||||||
Sbjct: 183 aagcaccag 191
to top
>dbj|AK072231.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001E21, full
           insert sequence
          Length = 1450

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 107/129 (82%)
 Strand = Plus / Plus

                                                                       
Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179
           ||||||||||||||| || ||||||| |  |||| |||   |||| |||||||||| |||
Sbjct: 96  atgaagatccagtgcaacgcgtgcggcgcggcggaggcgcgggtgctgtgctgcgccgac 155

                                                                       
Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239
           ||||| ||||| ||| ||   ||||||| |||| | ||||||||||||||||||||| | 
Sbjct: 156 gaggcagcgctctgcacggcgtgcgacgaggaggtgcacgccgccaacaagctcgccggg 215

                    
Query: 240 aagcaccag 248
           |||||||||
Sbjct: 216 aagcaccag 224
to top
>dbj|AB001886.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger
           protein, complete cds, clone:R2931
          Length = 1418

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 107/129 (82%)
 Strand = Plus / Plus

                                                                       
Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179
           ||||||||||||||| || ||||||| |  |||| |||   |||| |||||||||| |||
Sbjct: 71  atgaagatccagtgcaacgcgtgcggcgcggcggaggcgcgggtgctgtgctgcgccgac 130

                                                                       
Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239
           ||||| ||||| ||| ||   ||||||| |||| | ||||||||||||||||||||| | 
Sbjct: 131 gaggcagcgctctgcacggcgtgcgacgaggaggtgcacgccgccaacaagctcgccggg 190

                    
Query: 240 aagcaccag 248
           |||||||||
Sbjct: 191 aagcaccag 199
to top
>gb|AC135920.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0015G13,
              complete sequence
          Length = 143966

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                          
Query: 168    tgctgcgcggacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaac 227
              |||||||| |||||||| || ||||||||||||||||||   || |||||||||||||||
Sbjct: 134852 tgctgcgccgacgaggccgccctgtgcgcgcgctgcgaccgcgacatccacgccgccaac 134911
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                           
Query: 168     tgctgcgcggacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaac 227
               |||||||| |||||||| || ||||||||||||||||||   || |||||||||||||||
Sbjct: 6433113 tgctgcgccgacgaggccgccctgtgcgcgcgctgcgaccgcgacatccacgccgccaac 6433172



 Score = 48.1 bits (24), Expect = 0.016
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 181      aggcggcgctgtgcgcgcgctgcgacgtggag 212
                ||||||||||| |||||||| |||||||||||
Sbjct: 28784766 aggcggcgctgggcgcgcgcggcgacgtggag 28784797
to top
>dbj|AK106865.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-C11, full
           insert sequence
          Length = 2055

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                       
Query: 168 tgctgcgcggacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaac 227
           |||||||| |||||||| || ||||||||||||||||||   || |||||||||||||||
Sbjct: 281 tgctgcgccgacgaggccgccctgtgcgcgcgctgcgaccgcgacatccacgccgccaac 340
to top
>ref|NM_188312.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1074

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                       
Query: 168 tgctgcgcggacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaac 227
           |||||||| ||||| || || || ||||||||||||||| |  |  ||||||||||||||
Sbjct: 49  tgctgcgccgacgacgccgccctctgcgcgcgctgcgacctccacgtccacgccgccaac 108

                               
Query: 228 aagctcgccagcaagcacca 247
              |||||| ||||||||||
Sbjct: 109 cgcctcgccggcaagcacca 128
to top
>ref|XM_475953.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1329

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 181 aggcggcgctgtgcgcgcgctgcgacgtggag 212
           ||||||||||| |||||||| |||||||||||
Sbjct: 899 aggcggcgctgggcgcgcgcggcgacgtggag 930
to top
>gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_G11,
              complete sequence
          Length = 112796

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 181    aggcggcgctgtgcgcgcgctgcgacgtggag 212
              ||||||||||| |||||||| |||||||||||
Sbjct: 103479 aggcggcgctgggcgcgcgcggcgacgtggag 103510
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                           
Query: 168     tgctgcgcggacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaac 227
               |||||||| ||||| || || || ||||||||||||||| |  |  ||||||||||||||
Sbjct: 5638875 tgctgcgccgacgacgccgccctctgcgcgcgctgcgacctccacgtccacgccgccaac 5638934

                                   
Query: 228     aagctcgccagcaagcacca 247
                  |||||| ||||||||||
Sbjct: 5638935 cgcctcgccggcaagcacca 5638954
to top
>dbj|AP003105.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0489A05
          Length = 158815

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                          
Query: 168    tgctgcgcggacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaac 227
              |||||||| ||||| || || || ||||||||||||||| |  |  ||||||||||||||
Sbjct: 104348 tgctgcgccgacgacgccgccctctgcgcgcgctgcgacctccacgtccacgccgccaac 104407

                                  
Query: 228    aagctcgccagcaagcacca 247
                 |||||| ||||||||||
Sbjct: 104408 cgcctcgccggcaagcacca 104427
to top
>dbj|AK105906.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-G02, full
           insert sequence
          Length = 1482

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 181 aggcggcgctgtgcgcgcgctgcgacgtggag 212
           ||||||||||| |||||||| |||||||||||
Sbjct: 933 aggcggcgctgggcgcgcgcggcgacgtggag 964
to top
>dbj|AP004513.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT01O22, TM0043a,
             complete sequence
          Length = 54726

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 213   atccacgccgccaacaagctcgcc 236
             ||||||||||||||||||||||||
Sbjct: 29438 atccacgccgccaacaagctcgcc 29461
to top
>gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0035N21, complete sequence
          Length = 128331

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 181   aggcggcgctgtgcgcgcgctgcgacgtggag 212
             ||||||||||| |||||||| |||||||||||
Sbjct: 88701 aggcggcgctgggcgcgcgcggcgacgtggag 88670
to top
>ref|NM_100484.3| Arabidopsis thaliana STO (SALT TOLERANCE); transcription factor/
           zinc ion binding AT1G06040 (STO) transcript variant
           AT1G06040.1 mRNA, complete cds
          Length = 1227

 Score = 46.1 bits (23), Expect = 0.063
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 201 tgcgacgtggagatccacgccgccaacaagctcgccagcaagcacca 247
           |||||| | ||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 313 tgcgacatcgagattcacgccgctaacaaactcgctagcaagcacca 359
to top
>ref|NM_179267.2| Arabidopsis thaliana STO (SALT TOLERANCE); transcription factor/
           zinc ion binding AT1G06040 (STO) transcript variant
           AT1G06040.2 mRNA, complete cds
          Length = 1309

 Score = 46.1 bits (23), Expect = 0.063
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 201 tgcgacgtggagatccacgccgccaacaagctcgccagcaagcacca 247
           |||||| | ||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 313 tgcgacatcgagattcacgccgctaacaaactcgctagcaagcacca 359
to top
>gb|AY079377.1| Arabidopsis thaliana putative salt-tolerance protein (At1g06040)
           mRNA, complete cds
          Length = 778

 Score = 46.1 bits (23), Expect = 0.063
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 201 tgcgacgtggagatccacgccgccaacaagctcgccagcaagcacca 247
           |||||| | ||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 82  tgcgacatcgagattcacgccgctaacaaactcgctagcaagcacca 128
to top
>gb|AY045794.1| Arabidopsis thaliana putative salt-tolerance protein (At1g06040)
           mRNA, complete cds
          Length = 1116

 Score = 46.1 bits (23), Expect = 0.063
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 201 tgcgacgtggagatccacgccgccaacaagctcgccagcaagcacca 247
           |||||| | ||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 272 tgcgacatcgagattcacgccgctaacaaactcgctagcaagcacca 318
to top
>emb|X95572.1|ATSTO A.thaliana mRNA for salt-tolerance protein
          Length = 1033

 Score = 46.1 bits (23), Expect = 0.063
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 201 tgcgacgtggagatccacgccgccaacaagctcgccagcaagcacca 247
           |||||| | ||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 203 tgcgacatcgagattcacgccgctaacaaactcgctagcaagcacca 249
to top
>emb|BX817822.1|CNS0AEFO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL43ZF03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 978

 Score = 46.1 bits (23), Expect = 0.063
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 201 tgcgacgtggagatccacgccgccaacaagctcgccagcaagcacca 247
           |||||| | ||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 105 tgcgacatcgagattcacgccgctaacaaactcgctagcaagcacca 151
to top
>emb|BX816034.1|CNS0AD7C Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH24ZA08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1041

 Score = 46.1 bits (23), Expect = 0.063
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 201 tgcgacgtggagatccacgccgccaacaagctcgccagcaagcacca 247
           |||||| | ||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 212 tgcgacatcgagattcacgccgctaacaaactcgctagcaagcacca 258
to top
>emb|BX815485.1|CNS0ACZA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS65ZG02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1076

 Score = 46.1 bits (23), Expect = 0.063
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 201 tgcgacgtggagatccacgccgccaacaagctcgccagcaagcacca 247
           |||||| | ||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 262 tgcgacatcgagattcacgccgctaacaaactcgctagcaagcacca 308
to top
>emb|BX814784.1|CNS0AAR4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB94ZA09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1080

 Score = 46.1 bits (23), Expect = 0.063
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 201 tgcgacgtggagatccacgccgccaacaagctcgccagcaagcacca 247
           |||||| | ||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 289 tgcgacatcgagattcacgccgctaacaaactcgctagcaagcacca 335
to top
>gb|AC024174.2|T21E18 Sequence of BAC T21E18 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 74316

 Score = 46.1 bits (23), Expect = 0.063
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 201   tgcgacgtggagatccacgccgccaacaagctcgccagcaagcacca 247
             |||||| | ||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 28725 tgcgacatcgagattcacgccgctaacaaactcgctagcaagcacca 28679
to top
>emb|AJ585192.1| Streptomyces resistomycificus remA-R gene cluster
          Length = 16662

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 252   ctcccgctcgacgcgctcggcg 273
             ||||||||||||||||||||||
Sbjct: 12743 ctcccgctcgacgcgctcggcg 12764
to top
>gb|AF052585.1|AF052585 Malus domestica cultivar Fuji CONSTANS-like protein 2 (Col2) mRNA,
           complete cds
          Length = 1233

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 211 agatccacgccgccaacaagctcgcc 236
           |||||||||| |||||||||||||||
Sbjct: 149 agatccacgcggccaacaagctcgcc 174
to top
>gb|DQ234265.1| Glycine max salt-tolerance protein mRNA, complete cds
          Length = 1353

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 225 aacaagctcgccagcaagcaccagaggct 253
           |||||||| || |||||||||||||||||
Sbjct: 378 aacaagcttgcaagcaagcaccagaggct 406
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 250     ggctcccgctcgacgcgctcggcgc 274
               ||||| |||||||||||||||||||
Sbjct: 1997289 ggctcgcgctcgacgcgctcggcgc 1997265



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 256     cgctcgacgcgctcggcgcc 275
               ||||||||||||||||||||
Sbjct: 2279922 cgctcgacgcgctcggcgcc 2279941
to top
>gb|AC161371.4| Mus musculus BAC clone RP23-402N3 from chromosome 9, complete sequence
          Length = 203708

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 106    agaaaagcagaggcatgaagatcca 130
              ||||| |||||||||||||||||||
Sbjct: 195178 agaaatgcagaggcatgaagatcca 195202
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 250     ggctcccgctcgacgcgctcggcgc 274
               ||||| |||||||||||||||||||
Sbjct: 2379478 ggctcgcgctcgacgcgctcggcgc 2379502



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 256     cgctcgacgcgctcggcgcc 275
               ||||||||||||||||||||
Sbjct: 2094785 cgctcgacgcgctcggcgcc 2094766
to top
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 143     cggggtcgcggcggccacggt 163
               |||||||||||||||||||||
Sbjct: 1276236 cggggtcgcggcggccacggt 1276256
to top
>dbj|AK069785.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031H02, full
            insert sequence
          Length = 1705

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 184  cggcgctgtgcgcgcgctgcgacgtggag 212
            |||||||| |||||||| |||||||||||
Sbjct: 972  cggcgctgggcgcgcgcggcgacgtggag 1000
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 256     cgctcgacgcgctcggcgcc 275
               ||||||||||||||||||||
Sbjct: 1225470 cgctcgacgcgctcggcgcc 1225451
to top
>gb|AC145378.2| Pan troglodytes BAC clone RP43-56P12 from 7, complete sequence
          Length = 186835

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    gaaagcaagaaaagcagagg 118
             ||||||||||||||||||||
Sbjct: 63199 gaaagcaagaaaagcagagg 63180
to top
>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12
          Length = 333800

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 255    ccgctcgacgcgctcggcgccaag 278
              ||||||||||||||||||| ||||
Sbjct: 205277 ccgctcgacgcgctcggcgtcaag 205300
to top
>gb|AC003073.2| Homo sapiens PAC clone RP4-531J23 from 7, complete sequence
          Length = 26347

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    gaaagcaagaaaagcagagg 118
             ||||||||||||||||||||
Sbjct: 17712 gaaagcaagaaaagcagagg 17693
to top
>gb|AC101883.6| Mus musculus chromosome 1, clone RP23-402F17, complete sequence
          Length = 191721

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     gagaaagcaagaaaagcaga 116
              ||||||||||||||||||||
Sbjct: 143537 gagaaagcaagaaaagcaga 143518
to top
>gb|AC145783.1| Pan troglodytes BAC clone RP43-27O9 from 7, complete sequence
          Length = 175651

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    gaaagcaagaaaagcagagg 118
             ||||||||||||||||||||
Sbjct: 32043 gaaagcaagaaaagcagagg 32024
to top
>gb|AY330485.1| Saccharopolyspora erythraea amino acid permease gene, partial cds;
             transport protein, helix-turn-helix regulator (pkeRI),
             P450 monooxygenase (pkePI), P450 monooxygenase (pkePII),
             P450 monooxygenase (pkePIII), type I PKS (pkeAI), type I
             PKS (pkeAII), and type I PKS (pkeAIII) genes, complete
             cds; pkeAIV gene, complete sequence; type I PKS,
             monooxygenases, transporter, ketoacyl-ACP synthase
             (typeII), acyl carrier protien, amino transferase, and
             DNA-binding protein genes, complete cds; and unknown genes
          Length = 68451

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   ccgctcgacgcgctcggcgc 274
             ||||||||||||||||||||
Sbjct: 52593 ccgctcgacgcgctcggcgc 52612
to top
>emb|AL954342.10| Human DNA sequence from clone RP11-343L13 on chromosome 1 Contains part
             of the KCNN3 gene for potassium intermediate/small
             conductance calcium-activated channel, subfamily N, member
             3, complete sequence
          Length = 28342

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    cccgcctccctttcttcctc 41
             ||||||||||||||||||||
Sbjct: 23185 cccgcctccctttcttcctc 23166
to top
>dbj|AB222675.1| Uncultured bacterium gene for chitinase, partial cds, clone:RCC92
          Length = 400

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 257 gctcgacgcgctcggcgcca 276
           ||||||||||||||||||||
Sbjct: 85  gctcgacgcgctcggcgcca 104
to top
>gb|AE011675.1| Xanthomonas axonopodis pv. citri str. 306,  section 53 of 469 of the
            complete genome
          Length = 10189

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 263  cgcgctcggcgccaagctcc 282
            ||||||||||||||||||||
Sbjct: 2262 cgcgctcggcgccaagctcc 2243
to top
>gb|AF336797.2|AF336797 Homo sapiens small-conductance calcium-activated potassium channel
             (KCNN3) gene, complete cds
          Length = 163217

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    cccgcctccctttcttcctc 41
             ||||||||||||||||||||
Sbjct: 89917 cccgcctccctttcttcctc 89936
to top
>gb|AC154310.2| Mus musculus BAC clone RP23-358E14 from chromosome 13, complete
             sequence
          Length = 176209

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    gagaaagcaagaaaagcaga 116
             ||||||||||||||||||||
Sbjct: 85794 gagaaagcaagaaaagcaga 85813
to top
>gb|AY830922.1| Pisum sativum CONSTANS-LIKE b (COLb) mRNA, complete cds
          Length = 1275

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 213 atccacgccgccaacaagctcgcc 236
           ||||||||||||||||| ||||||
Sbjct: 158 atccacgccgccaacaaactcgcc 181
to top
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 221     cgccaacaagctcgccagca 240
               ||||||||||||||||||||
Sbjct: 4466425 cgccaacaagctcgccagca 4466444
to top
>emb|AJ250131.1|ASP250131 Nostoc sp. PCC 7120 hepB gene
          Length = 1506

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 221 cgccaacaagctcgccagca 240
           ||||||||||||||||||||
Sbjct: 923 cgccaacaagctcgccagca 942
to top
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 256     cgctcgacgcgctcggcgcc 275
               ||||||||||||||||||||
Sbjct: 2748569 cgctcgacgcgctcggcgcc 2748550
to top
>gb|AC174763.1| Gasterosteus aculeatus clone VMRC28-119C03, complete sequence
          Length = 138567

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    agaaagcaagaaaagcagag 117
             ||||||||||||||||||||
Sbjct: 39889 agaaagcaagaaaagcagag 39908
to top
>emb|CT009728.8| Mouse DNA sequence from clone RP23-57I20 on chromosome 13, complete
             sequence
          Length = 202072

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    gagaaagcaagaaaagcaga 116
             ||||||||||||||||||||
Sbjct: 12109 gagaaagcaagaaaagcaga 12090
to top
>dbj|AP003071.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-554A11, complete
             sequence
          Length = 191898

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   aagctcgccagcaagcacca 247
             ||||||||||||||||||||
Sbjct: 90260 aagctcgccagcaagcacca 90241
to top
>gb|U68035.1|ASU68035 Anabaena sp. strain PCC 7120 HepB (hepB) gene, complete cds
          Length = 2256

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 221  cgccaacaagctcgccagca 240
            ||||||||||||||||||||
Sbjct: 1538 cgccaacaagctcgccagca 1557


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,259,470
Number of Sequences: 3902068
Number of extensions: 2259470
Number of successful extensions: 57669
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 56434
Number of HSP's gapped (non-prelim): 1218
length of query: 295
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 273
effective length of database: 17,147,199,772
effective search space: 4681185537756
effective search space used: 4681185537756
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top