ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast14c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_187456.1| Oryza sativa (japonica cultivar-group), predic... 343 3e-91
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 343 3e-91
3gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome... 343 3e-91
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 343 3e-91
5dbj|AK120527.1| Oryza sativa (japonica cultivar-group) cDNA clon... 343 3e-91
6dbj|AK104424.1| Oryza sativa (japonica cultivar-group) cDNA clon... 343 3e-91
7dbj|AK104116.1| Oryza sativa (japonica cultivar-group) cDNA clon... 343 3e-91
8dbj|AK061468.1| Oryza sativa (japonica cultivar-group) cDNA clon... 343 3e-91
9dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 58 3e-05
10gb|AY226165.1| Chlamydomonas reinhardtii ribosomal protein L4 ge... 54 4e-04
11ref|XM_545155.2| PREDICTED: Canis familiaris similar to leucine ... 44 0.40
12gb|AE012193.1| Xanthomonas campestris pv. campestris str. ATCC 3... 44 0.40
13gb|AC084884.2| Oryza sativa chromosome 10 clone OSJNBa0031A07, c... 44 0.40
14gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 44 0.40
15dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
16dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
17dbj|AP006343.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
18emb|Y14932.1|SORPL4 Spinacia oleracea rpL4 gene 44 0.40
19emb|X93160.1|SORPL4GEN S.oleracea mRNA for ribosomal protein L4 44 0.40
20gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.40
21gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 1.6
22emb|AJ862840.1| Streptomyces griseus subsp. griseus streptomycin... 42 1.6
23emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.6
24gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.6
25gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
26emb|AL844879.5|CNS08CB2 Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.6
27dbj|AB022095.1| Streptomyces griseus genes for MelC1 and MelC2, ... 42 1.6
28ref|XM_479551.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.2
29gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 6.2
30ref|XM_421231.1| PREDICTED: Gallus gallus similar to A-kinase an... 40 6.2
31emb|AL359085.14| Human DNA sequence from clone RP11-113J24 on ch... 40 6.2
32emb|AL356966.11| Human DNA sequence from clone RP11-237L12 on ch... 40 6.2
33gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 6.2
34dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
35dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
36gb|AF314182.2|AF314182 Triticum aestivum triose phosphate transl... 40 6.2
37dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.2
38dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
39dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.2
40emb|AL928757.3|CNS08CBU Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.2
41dbj|AP005009.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
42ref|XM_321902.2| Anopheles gambiae str. PEST ENSANGP00000025075 ... 40 6.2
43dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
44ref|NM_210055.1| Eremothecium gossypii AEL159Wp (AEL159W), mRNA 40 6.2
45dbj|AK069805.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
46dbj|AK064745.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
47dbj|AP000879.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 6.2
48gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 6.2
49emb|AM156932.1| Streptomyces steffisburgensis cluster for steffi... 40 6.2
50emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.2
51dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 6.2 
>ref|NM_187456.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1281

 Score =  343 bits (173), Expect = 3e-91
 Identities = 275/309 (88%)
 Strand = Plus / Plus

                                                                       
Query: 155 ctccatcctccgcgcgctgcgggccgaggccaccaccctcccggtcatcaacttcactgg 214
           |||| |||||||||| || || ||||||||  |||||||||||||  ||  |||||| ||
Sbjct: 162 ctccgtcctccgcgcccttcgcgccgaggcggccaccctcccggttctctccttcaccgg 221

                                                                       
Query: 215 ggagaaggtcggggaggtcgccctcgacatcaaggccgcgccgccctccaccgcgcgcgc 274
           |||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||
Sbjct: 222 ggagaaggtcggggaggtcgccctcgacctcaagtcggcgccgccctccaccgcgcgcgc 281

                                                                       
Query: 275 cgtcgtgcaccgcgccctcatcaccgaccgccagaacgcgcggcggggcacggcctccac 334
           |||||||||||||||| ||||||||||||||||||||  ||| || ||||||||||||||
Sbjct: 282 cgtcgtgcaccgcgccatcatcaccgaccgccagaacaagcgccgcggcacggcctccac 341

                                                                       
Query: 335 cctcacccgcggggaggtcaggggcggcgggaggaagccctacggccagaagaagaccgg 394
            ||||||||||| ||||||||||| ||||| ||||||||||||   ||||||||||| ||
Sbjct: 342 gctcacccgcggcgaggtcaggggaggcggcaggaagccctaccagcagaagaagacggg 401

                                                                       
Query: 395 gaaggcgcggcgcgggtcggtccgcacgccgctacgccccggcggtggtgtcatcttcgg 454
           ||||||||||||||||||| | ||||||||||| ||||||||||| || ||||| |||||
Sbjct: 402 gaaggcgcggcgcgggtcgatgcgcacgccgctccgccccggcggcggcgtcatattcgg 461

                    
Query: 455 ccccaagcc 463
            ||||||||
Sbjct: 462 gcccaagcc 470
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  343 bits (173), Expect = 3e-91
 Identities = 275/309 (88%)
 Strand = Plus / Plus

                                                                           
Query: 155     ctccatcctccgcgcgctgcgggccgaggccaccaccctcccggtcatcaacttcactgg 214
               |||| |||||||||| || || ||||||||  |||||||||||||  ||  |||||| ||
Sbjct: 8726098 ctccgtcctccgcgcccttcgcgccgaggcggccaccctcccggttctctccttcaccgg 8726157

                                                                           
Query: 215     ggagaaggtcggggaggtcgccctcgacatcaaggccgcgccgccctccaccgcgcgcgc 274
               |||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||
Sbjct: 8726158 ggagaaggtcggggaggtcgccctcgacctcaagtcggcgccgccctccaccgcgcgcgc 8726217

                                                                           
Query: 275     cgtcgtgcaccgcgccctcatcaccgaccgccagaacgcgcggcggggcacggcctccac 334
               |||||||||||||||| ||||||||||||||||||||  ||| || ||||||||||||||
Sbjct: 8726218 cgtcgtgcaccgcgccatcatcaccgaccgccagaacaagcgccgcggcacggcctccac 8726277

                                                                           
Query: 335     cctcacccgcggggaggtcaggggcggcgggaggaagccctacggccagaagaagaccgg 394
                ||||||||||| ||||||||||| ||||| ||||||||||||   ||||||||||| ||
Sbjct: 8726278 gctcacccgcggcgaggtcaggggaggcggcaggaagccctaccagcagaagaagacggg 8726337

                                                                           
Query: 395     gaaggcgcggcgcgggtcggtccgcacgccgctacgccccggcggtggtgtcatcttcgg 454
               ||||||||||||||||||| | ||||||||||| ||||||||||| || ||||| |||||
Sbjct: 8726338 gaaggcgcggcgcgggtcgatgcgcacgccgctccgccccggcggcggcgtcatattcgg 8726397

                        
Query: 455     ccccaagcc 463
                ||||||||
Sbjct: 8726398 gcccaagcc 8726406
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>gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1012B02,
             complete sequence
          Length = 115270

 Score =  343 bits (173), Expect = 3e-91
 Identities = 275/309 (88%)
 Strand = Plus / Plus

                                                                         
Query: 155   ctccatcctccgcgcgctgcgggccgaggccaccaccctcccggtcatcaacttcactgg 214
             |||| |||||||||| || || ||||||||  |||||||||||||  ||  |||||| ||
Sbjct: 69749 ctccgtcctccgcgcccttcgcgccgaggcggccaccctcccggttctctccttcaccgg 69808

                                                                         
Query: 215   ggagaaggtcggggaggtcgccctcgacatcaaggccgcgccgccctccaccgcgcgcgc 274
             |||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||
Sbjct: 69809 ggagaaggtcggggaggtcgccctcgacctcaagtcggcgccgccctccaccgcgcgcgc 69868

                                                                         
Query: 275   cgtcgtgcaccgcgccctcatcaccgaccgccagaacgcgcggcggggcacggcctccac 334
             |||||||||||||||| ||||||||||||||||||||  ||| || ||||||||||||||
Sbjct: 69869 cgtcgtgcaccgcgccatcatcaccgaccgccagaacaagcgccgcggcacggcctccac 69928

                                                                         
Query: 335   cctcacccgcggggaggtcaggggcggcgggaggaagccctacggccagaagaagaccgg 394
              ||||||||||| ||||||||||| ||||| ||||||||||||   ||||||||||| ||
Sbjct: 69929 gctcacccgcggcgaggtcaggggaggcggcaggaagccctaccagcagaagaagacggg 69988

                                                                         
Query: 395   gaaggcgcggcgcgggtcggtccgcacgccgctacgccccggcggtggtgtcatcttcgg 454
             ||||||||||||||||||| | ||||||||||| ||||||||||| || ||||| |||||
Sbjct: 69989 gaaggcgcggcgcgggtcgatgcgcacgccgctccgccccggcggcggcgtcatattcgg 70048

                      
Query: 455   ccccaagcc 463
              ||||||||
Sbjct: 70049 gcccaagcc 70057
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  343 bits (173), Expect = 3e-91
 Identities = 275/309 (88%)
 Strand = Plus / Plus

                                                                           
Query: 155     ctccatcctccgcgcgctgcgggccgaggccaccaccctcccggtcatcaacttcactgg 214
               |||| |||||||||| || || ||||||||  |||||||||||||  ||  |||||| ||
Sbjct: 8723933 ctccgtcctccgcgcccttcgcgccgaggcggccaccctcccggttctctccttcaccgg 8723992

                                                                           
Query: 215     ggagaaggtcggggaggtcgccctcgacatcaaggccgcgccgccctccaccgcgcgcgc 274
               |||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||
Sbjct: 8723993 ggagaaggtcggggaggtcgccctcgacctcaagtcggcgccgccctccaccgcgcgcgc 8724052

                                                                           
Query: 275     cgtcgtgcaccgcgccctcatcaccgaccgccagaacgcgcggcggggcacggcctccac 334
               |||||||||||||||| ||||||||||||||||||||  ||| || ||||||||||||||
Sbjct: 8724053 cgtcgtgcaccgcgccatcatcaccgaccgccagaacaagcgccgcggcacggcctccac 8724112

                                                                           
Query: 335     cctcacccgcggggaggtcaggggcggcgggaggaagccctacggccagaagaagaccgg 394
                ||||||||||| ||||||||||| ||||| ||||||||||||   ||||||||||| ||
Sbjct: 8724113 gctcacccgcggcgaggtcaggggaggcggcaggaagccctaccagcagaagaagacggg 8724172

                                                                           
Query: 395     gaaggcgcggcgcgggtcggtccgcacgccgctacgccccggcggtggtgtcatcttcgg 454
               ||||||||||||||||||| | ||||||||||| ||||||||||| || ||||| |||||
Sbjct: 8724173 gaaggcgcggcgcgggtcgatgcgcacgccgctccgccccggcggcggcgtcatattcgg 8724232

                        
Query: 455     ccccaagcc 463
                ||||||||
Sbjct: 8724233 gcccaagcc 8724241
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>dbj|AK120527.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127C20, full
           insert sequence
          Length = 1301

 Score =  343 bits (173), Expect = 3e-91
 Identities = 275/309 (88%)
 Strand = Plus / Plus

                                                                       
Query: 155 ctccatcctccgcgcgctgcgggccgaggccaccaccctcccggtcatcaacttcactgg 214
           |||| |||||||||| || || ||||||||  |||||||||||||  ||  |||||| ||
Sbjct: 275 ctccgtcctccgcgcccttcgcgccgaggcggccaccctcccggttctctccttcaccgg 334

                                                                       
Query: 215 ggagaaggtcggggaggtcgccctcgacatcaaggccgcgccgccctccaccgcgcgcgc 274
           |||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||
Sbjct: 335 ggagaaggtcggggaggtcgccctcgacctcaagtcggcgccgccctccaccgcgcgcgc 394

                                                                       
Query: 275 cgtcgtgcaccgcgccctcatcaccgaccgccagaacgcgcggcggggcacggcctccac 334
           |||||||||||||||| ||||||||||||||||||||  ||| || ||||||||||||||
Sbjct: 395 cgtcgtgcaccgcgccatcatcaccgaccgccagaacaagcgccgcggcacggcctccac 454

                                                                       
Query: 335 cctcacccgcggggaggtcaggggcggcgggaggaagccctacggccagaagaagaccgg 394
            ||||||||||| ||||||||||| ||||| ||||||||||||   ||||||||||| ||
Sbjct: 455 gctcacccgcggcgaggtcaggggaggcggcaggaagccctaccagcagaagaagacggg 514

                                                                       
Query: 395 gaaggcgcggcgcgggtcggtccgcacgccgctacgccccggcggtggtgtcatcttcgg 454
           ||||||||||||||||||| | ||||||||||| ||||||||||| || ||||| |||||
Sbjct: 515 gaaggcgcggcgcgggtcgatgcgcacgccgctccgccccggcggcggcgtcatattcgg 574

                    
Query: 455 ccccaagcc 463
            ||||||||
Sbjct: 575 gcccaagcc 583
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>dbj|AK104424.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-F06, full
           insert sequence
          Length = 1212

 Score =  343 bits (173), Expect = 3e-91
 Identities = 275/309 (88%)
 Strand = Plus / Plus

                                                                       
Query: 155 ctccatcctccgcgcgctgcgggccgaggccaccaccctcccggtcatcaacttcactgg 214
           |||| |||||||||| || || ||||||||  |||||||||||||  ||  |||||| ||
Sbjct: 224 ctccgtcctccgcgcccttcgcgccgaggcggccaccctcccggttctctccttcaccgg 283

                                                                       
Query: 215 ggagaaggtcggggaggtcgccctcgacatcaaggccgcgccgccctccaccgcgcgcgc 274
           |||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||
Sbjct: 284 ggagaaggtcggggaggtcgccctcgacctcaagtcggcgccgccctccaccgcgcgcgc 343

                                                                       
Query: 275 cgtcgtgcaccgcgccctcatcaccgaccgccagaacgcgcggcggggcacggcctccac 334
           |||||||||||||||| ||||||||||||||||||||  ||| || ||||||||||||||
Sbjct: 344 cgtcgtgcaccgcgccatcatcaccgaccgccagaacaagcgccgcggcacggcctccac 403

                                                                       
Query: 335 cctcacccgcggggaggtcaggggcggcgggaggaagccctacggccagaagaagaccgg 394
            ||||||||||| ||||||||||| ||||| ||||||||||||   ||||||||||| ||
Sbjct: 404 gctcacccgcggcgaggtcaggggaggcggcaggaagccctaccagcagaagaagacggg 463

                                                                       
Query: 395 gaaggcgcggcgcgggtcggtccgcacgccgctacgccccggcggtggtgtcatcttcgg 454
           ||||||||||||||||||| | ||||||||||| ||||||||||| || ||||| |||||
Sbjct: 464 gaaggcgcggcgcgggtcgatgcgcacgccgctccgccccggcggcggcgtcatattcgg 523

                    
Query: 455 ccccaagcc 463
            ||||||||
Sbjct: 524 gcccaagcc 532
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>dbj|AK104116.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-A01, full
           insert sequence
          Length = 1227

 Score =  343 bits (173), Expect = 3e-91
 Identities = 275/309 (88%)
 Strand = Plus / Plus

                                                                       
Query: 155 ctccatcctccgcgcgctgcgggccgaggccaccaccctcccggtcatcaacttcactgg 214
           |||| |||||||||| || || ||||||||  |||||||||||||  ||  |||||| ||
Sbjct: 226 ctccgtcctccgcgcccttcgcgccgaggcggccaccctcccggttctctccttcaccgg 285

                                                                       
Query: 215 ggagaaggtcggggaggtcgccctcgacatcaaggccgcgccgccctccaccgcgcgcgc 274
           |||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||
Sbjct: 286 ggagaaggtcggggaggtcgccctcgacctcaagtcggcgccgccctccaccgcgcgcgc 345

                                                                       
Query: 275 cgtcgtgcaccgcgccctcatcaccgaccgccagaacgcgcggcggggcacggcctccac 334
           |||||||||||||||| ||||||||||||||||||||  ||| || ||||||||||||||
Sbjct: 346 cgtcgtgcaccgcgccatcatcaccgaccgccagaacaagcgccgcggcacggcctccac 405

                                                                       
Query: 335 cctcacccgcggggaggtcaggggcggcgggaggaagccctacggccagaagaagaccgg 394
            ||||||||||| ||||||||||| ||||| ||||||||||||   ||||||||||| ||
Sbjct: 406 gctcacccgcggcgaggtcaggggaggcggcaggaagccctaccagcagaagaagacggg 465

                                                                       
Query: 395 gaaggcgcggcgcgggtcggtccgcacgccgctacgccccggcggtggtgtcatcttcgg 454
           ||||||||||||||||||| | ||||||||||| ||||||||||| || ||||| |||||
Sbjct: 466 gaaggcgcggcgcgggtcgatgcgcacgccgctccgccccggcggcggcgtcatattcgg 525

                    
Query: 455 ccccaagcc 463
            ||||||||
Sbjct: 526 gcccaagcc 534
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>dbj|AK061468.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D01, full
           insert sequence
          Length = 1249

 Score =  343 bits (173), Expect = 3e-91
 Identities = 275/309 (88%)
 Strand = Plus / Plus

                                                                       
Query: 155 ctccatcctccgcgcgctgcgggccgaggccaccaccctcccggtcatcaacttcactgg 214
           |||| |||||||||| || || ||||||||  |||||||||||||  ||  |||||| ||
Sbjct: 224 ctccgtcctccgcgcccttcgcgccgaggcggccaccctcccggttctctccttcaccgg 283

                                                                       
Query: 215 ggagaaggtcggggaggtcgccctcgacatcaaggccgcgccgccctccaccgcgcgcgc 274
           |||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||
Sbjct: 284 ggagaaggtcggggaggtcgccctcgacctcaagtcggcgccgccctccaccgcgcgcgc 343

                                                                       
Query: 275 cgtcgtgcaccgcgccctcatcaccgaccgccagaacgcgcggcggggcacggcctccac 334
           |||||||||||||||| ||||||||||||||||||||  ||| || ||||||||||||||
Sbjct: 344 cgtcgtgcaccgcgccatcatcaccgaccgccagaacaagcgccgcggcacggcctccac 403

                                                                       
Query: 335 cctcacccgcggggaggtcaggggcggcgggaggaagccctacggccagaagaagaccgg 394
            ||||||||||| ||||||||||| ||||| ||||||||||||   ||||||||||| ||
Sbjct: 404 gctcacccgcggcgaggtcaggggaggcggcaggaagccctaccagcagaagaagacggg 463

                                                                       
Query: 395 gaaggcgcggcgcgggtcggtccgcacgccgctacgccccggcggtggtgtcatcttcgg 454
           ||||||||||||||||||| | ||||||||||| ||||||||||| || ||||| |||||
Sbjct: 464 gaaggcgcggcgcgggtcgatgcgcacgccgctccgccccggcggcggcgtcatattcgg 523

                    
Query: 455 ccccaagcc 463
            ||||||||
Sbjct: 524 gcccaagcc 532
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 327   gcctccaccctcacccgcggggaggtcaggggcggcgggaggaagccct 375
             |||||||||||||||||||| |||||  | |||||||| ||||||||||
Sbjct: 87131 gcctccaccctcacccgcggcgaggtgcgcggcggcggcaggaagccct 87179
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>gb|AY226165.1| Chlamydomonas reinhardtii ribosomal protein L4 gene, complete cds;
           nuclear gene for chloroplast product
          Length = 2536

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 431 ccccggcggtggtgtcatcttcggccccaag 461
           ||||||||||||||||| |||||||||||||
Sbjct: 702 ccccggcggtggtgtcaccttcggccccaag 732
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>ref|XM_545155.2| PREDICTED: Canis familiaris similar to leucine rich repeat containing
            33 (LOC488032), mRNA
          Length = 2232

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 166  gcgcgctgcgggccgaggccaccaccctcc 195
            ||||||||||||||| |||| |||||||||
Sbjct: 1667 gcgcgctgcgggccgtggccgccaccctcc 1696
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>gb|AE012193.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 101
            of 460 of the complete genome
          Length = 13054

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 270  cgcgccgtcgtgcaccgcgccc 291
            ||||||||||||||||||||||
Sbjct: 4547 cgcgccgtcgtgcaccgcgccc 4526
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>gb|AC084884.2| Oryza sativa chromosome 10 clone OSJNBa0031A07, complete sequence
          Length = 134553

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 314   gcggcggggcacggcctccacc 335
             ||||||||||||||||||||||
Sbjct: 60659 gcggcggggcacggcctccacc 60680
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 270     cgcgccgtcgtgcaccgcgccc 291
               ||||||||||||||||||||||
Sbjct: 3936890 cgcgccgtcgtgcaccgcgccc 3936911
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 314     gcggcggggcacggcctccacc 335
               ||||||||||||||||||||||
Sbjct: 2972237 gcggcggggcacggcctccacc 2972258
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 342      cgcggggaggtcaggggcggcgggaggaag 371
                |||||||||| | |||||||||||||||||
Sbjct: 11831353 cgcggggaggacgggggcggcgggaggaag 11831324



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 249      gccgcgccgccctccaccgc 268
                ||||||||||||||||||||
Sbjct: 28823764 gccgcgccgccctccaccgc 28823745
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>dbj|AP006343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1032F05
          Length = 151412

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 342   cgcggggaggtcaggggcggcgggaggaag 371
             |||||||||| | |||||||||||||||||
Sbjct: 63653 cgcggggaggacgggggcggcgggaggaag 63624
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>emb|Y14932.1|SORPL4 Spinacia oleracea rpL4 gene
          Length = 3003

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 270 cgcgccgtcgtgcaccgcgccctcatcaccgaccgccagaacgcgcggcggggcacggcc 329
           ||||||||||| ||||| | |||||||||| ||| |||||||   || || || || || 
Sbjct: 307 cgcgccgtcgtccaccgtggcctcatcacccacctccagaacaaacgtcgtgggactgct 366

                         
Query: 330 tccaccctcacccg 343
           ||||||||||||||
Sbjct: 367 tccaccctcacccg 380
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>emb|X93160.1|SORPL4GEN S.oleracea mRNA for ribosomal protein L4
          Length = 1028

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 270 cgcgccgtcgtgcaccgcgccctcatcaccgaccgccagaacgcgcggcggggcacggcc 329
           ||||||||||| ||||| | |||||||||| ||| |||||||   || || || || || 
Sbjct: 325 cgcgccgtcgtccaccgtggcctcatcacccacctccagaacaaacgtcgtgggactgct 384

                         
Query: 330 tccaccctcacccg 343
           ||||||||||||||
Sbjct: 385 tccaccctcacccg 398
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 314     gcggcggggcacggcctccacc 335
               ||||||||||||||||||||||
Sbjct: 2972158 gcggcggggcacggcctccacc 2972179
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 250     ccgcgccgccctccaccgcgcgcgc 274
               |||||||| ||||||||||||||||
Sbjct: 2370430 ccgcgccggcctccaccgcgcgcgc 2370406
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>emb|AJ862840.1| Streptomyces griseus subsp. griseus streptomycin gene cluster, strain
             DSM 40236
          Length = 90600

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 314   gcggcggggcacggcctccaccctc 338
             ||||||||||||||| |||||||||
Sbjct: 63949 gcggcggggcacggcgtccaccctc 63925
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 250     ccgcgccgccctccaccgcgcgcgc 274
               |||||||| ||||||||||||||||
Sbjct: 2014135 ccgcgccggcctccaccgcgcgcgc 2014159
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 165     cgcgcgctgcgggccgaggcc 185
               |||||||||||||||||||||
Sbjct: 4721290 cgcgcgctgcgggccgaggcc 4721270



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 163     tccgcgcgctgcgggccgag 182
               ||||||||||||||||||||
Sbjct: 4620055 tccgcgcgctgcgggccgag 4620036
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 342      cgcggggaggtcaggggcggcggga 366
                |||||||||| ||||||||||||||
Sbjct: 12748923 cgcggggaggacaggggcggcggga 12748899



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 144      aggccgtccgcctccatcct 163
                ||||||||||||||||||||
Sbjct: 20823707 aggccgtccgcctccatcct 20823688
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>emb|AL844879.5|CNS08CB2 Oryza sativa chromosome 12, . BAC OSJNBa0036H15 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 156724

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 342    cgcggggaggtcaggggcggcggga 366
              |||||||||| ||||||||||||||
Sbjct: 124578 cgcggggaggacaggggcggcggga 124602
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>dbj|AB022095.1| Streptomyces griseus genes for MelC1 and MelC2, complete and
           partial cds
          Length = 6100

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 277 tcgtgcaccgcgccctcatcaccgaccgc 305
           |||||| |||||||||| |||||||||||
Sbjct: 389 tcgtgccccgcgccctcgtcaccgaccgc 417
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>ref|XM_479551.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 852

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 249 gccgcgccgccctccaccgc 268
           ||||||||||||||||||||
Sbjct: 80  gccgcgccgccctccaccgc 61
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                              
Query: 249    gccgcgccgccctcca-ccgcgcgcgccgtcg 279
              ||||||||||| |||| |||||||||||||||
Sbjct: 786263 gccgcgccgccatccagccgcgcgcgccgtcg 786232
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>ref|XM_421231.1| PREDICTED: Gallus gallus similar to A-kinase anchor protein 6;
            A-kinase anchor protein 100; protein kinase A anchoring
            protein 6 (LOC423314), mRNA
          Length = 9419

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 311  cgcgcggcggggcacggcct 330
            ||||||||||||||||||||
Sbjct: 3728 cgcgcggcggggcacggcct 3747
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>emb|AL359085.14| Human DNA sequence from clone RP11-113J24 on chromosome 13 Contains
            the 5' end of a novel gene, a novel gene (FLJ14624
            FLJ31847), the 5' end of a novel gene (FLJ22153), COX5B
            (cytochrome c oxidase subunit Vb) pseudogene and two CpG
            islands, complete sequence
          Length = 152794

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 326  ggcctccaccctcacccgcgggga 349
            ||||||| ||||||||||||||||
Sbjct: 1644 ggcctcctccctcacccgcgggga 1667
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>emb|AL356966.11| Human DNA sequence from clone RP11-237L12 on chromosome 13 Contains the
             5' end of two novel genes and a CpG island, complete
             sequence
          Length = 32387

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 326   ggcctccaccctcacccgcgggga 349
             ||||||| ||||||||||||||||
Sbjct: 32031 ggcctcctccctcacccgcgggga 32054
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>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V,
              complete sequence
          Length = 1519138

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    cgccgccctccaccgcgcgc 272
              ||||||||||||||||||||
Sbjct: 333593 cgccgccctccaccgcgcgc 333574
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 144      aggccgtccgcctccatcct 163
                ||||||||||||||||||||
Sbjct: 20897493 aggccgtccgcctccatcct 20897474
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 248      ggccgcgccgccctccaccg 267
                ||||||||||||||||||||
Sbjct: 11875930 ggccgcgccgccctccaccg 11875949
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>gb|AF314182.2|AF314182 Triticum aestivum triose phosphate translocator (tpt1) mRNA,
           complete cds
          Length = 1484

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 271 gcgccgtcgtgcaccgcgcc 290
           ||||||||||||||||||||
Sbjct: 134 gcgccgtcgtgcaccgcgcc 115
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 230     ggtcgccctcgacatcaagg 249
               ||||||||||||||||||||
Sbjct: 7104251 ggtcgccctcgacatcaagg 7104232
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>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0008J01
          Length = 159900

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 249   gccgcgccgccctccaccgc 268
             ||||||||||||||||||||
Sbjct: 81450 gccgcgccgccctccaccgc 81431
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 253     cgccgccctccaccgcgcgcgccg 276
               |||||||||| |||||||||||||
Sbjct: 3527714 cgccgccctcgaccgcgcgcgccg 3527737



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 327     gcctccaccctcacccgcgg 346
               ||||||||||||||||||||
Sbjct: 2840095 gcctccaccctcacccgcgg 2840076
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>emb|AL928757.3|CNS08CBU Oryza sativa chromosome 12, . BAC OSJNBb0046O08 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 101075

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   aggccgtccgcctccatcct 163
             ||||||||||||||||||||
Sbjct: 99220 aggccgtccgcctccatcct 99201
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>dbj|AP005009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0572A04
          Length = 132018

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   ggccgcgccgccctccaccg 267
             ||||||||||||||||||||
Sbjct: 73703 ggccgcgccgccctccaccg 73722
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>ref|XM_321902.2| Anopheles gambiae str. PEST ENSANGP00000025075
           (ENSANGG00000011368), partial mRNA
          Length = 852

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 433 ccggcggtggtgtcatcttc 452
           ||||||||||||||||||||
Sbjct: 308 ccggcggtggtgtcatcttc 327
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>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full
            insert sequence
          Length = 2509

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 144  aggccgtccgcctccatcct 163
            ||||||||||||||||||||
Sbjct: 1258 aggccgtccgcctccatcct 1239
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>ref|NM_210055.1| Eremothecium gossypii AEL159Wp (AEL159W), mRNA
          Length = 552

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 cgccgccctccaccgcgcgc 272
           ||||||||||||||||||||
Sbjct: 397 cgccgccctccaccgcgcgc 378
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>dbj|AK069805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030L10, full
           insert sequence
          Length = 1829

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 144 aggccgtccgcctccatcct 163
           ||||||||||||||||||||
Sbjct: 537 aggccgtccgcctccatcct 518
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>dbj|AK064745.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-E04, full
           insert sequence
          Length = 852

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 249 gccgcgccgccctccaccgc 268
           ||||||||||||||||||||
Sbjct: 80  gccgcgccgccctccaccgc 61
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>dbj|AP000879.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-805J14, complete
             sequence
          Length = 169725

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 180   gaggccaccaccctcccggt 199
             ||||||||||||||||||||
Sbjct: 32866 gaggccaccaccctcccggt 32847
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 263    caccgcgcgcgccgtcgtgcaccg 286
              ||||||||||||||||| ||||||
Sbjct: 410729 caccgcgcgcgccgtcgagcaccg 410706
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>emb|AM156932.1| Streptomyces steffisburgensis cluster for steffimycin biosynthesis,
           strain NRRL 3193
          Length = 42877

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 cgccgctacgccccggcggt 440
           ||||||||||||||||||||
Sbjct: 959 cgccgctacgccccggcggt 940
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>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 107819

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   aggccgtccgcctccatcct 163
             ||||||||||||||||||||
Sbjct: 61502 aggccgtccgcctccatcct 61521
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 241     acatcaaggccgcgccgccc 260
               ||||||||||||||||||||
Sbjct: 2658528 acatcaaggccgcgccgccc 2658547


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,140,319
Number of Sequences: 3902068
Number of extensions: 2140319
Number of successful extensions: 53127
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 51069
Number of HSP's gapped (non-prelim): 2084
length of query: 463
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 441
effective length of database: 17,147,199,772
effective search space: 7561915099452
effective search space used: 7561915099452
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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