>GALT6_BOVIN (Q5EA41) Polypeptide N-acetylgalactosaminyltransferase 6 (EC|
           2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase
           6) (UDP-GalNAc:polypeptide
           N-acetylgalactosaminyltransferase 6) (Polypeptide GalNAc
           transferase 6) (GalNAc-T6) (pp-GaNTase 6)
          Length = 622

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 78  GYCLSVRDGNVVLAPSNPRDEHQHW 152
           G CL+ +D   V+A  NP D HQHW
Sbjct: 595 GTCLTSKDKKPVMATCNPSDPHQHW 619

>GALT6_MOUSE (Q8C7U7) Polypeptide N-acetylgalactosaminyltransferase 6 (EC|
           2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase
           6) (UDP-GalNAc:polypeptide
           N-acetylgalactosaminyltransferase 6) (Polypeptide GalNAc
           transferase 6) (GalNAc-T6) (pp-GaNTase 6)
          Length = 622

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 78  GYCLSVRDGNVVLAPSNPRDEHQHW 152
           G CL+ +D    +AP NPRD +Q W
Sbjct: 595 GTCLTSQDKKPAMAPCNPRDPYQLW 619

>GALT6_HUMAN (Q8NCL4) Polypeptide N-acetylgalactosaminyltransferase 6 (EC|
           2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase
           6) (UDP-GalNAc:polypeptide
           N-acetylgalactosaminyltransferase 6) (Polypeptide GalNAc
           transferase 6) (GalNAc-T6) (pp-GaNTase 6)
          Length = 622

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 78  GYCLSVRDGNVVLAPSNPRDEHQHW 152
           G CL+ +D    +AP NP D HQ W
Sbjct: 595 GTCLTSQDKKPAMAPCNPSDPHQLW 619

>RBL1_HUMAN (P28749) Retinoblastoma-like protein 1 (107 kDa|
           retinoblastoma-associated protein) (PRB1) (P107)
          Length = 1068

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
 Frame = -2

Query: 421 PPWSLSPL---RASKLRRMLFTMRMQRKPLPTSPLSVHITDSSRNSGLNGTSFTGWDWPR 251
           P   +SPL   R  ++R    ++R   +PL  SP+SVH   SS  +G       G D P+
Sbjct: 610 PLMPMSPLMHPRVKEVRTDSGSLRRDMQPL--SPISVHERYSSPTAGSAKRRLFGEDPPK 667

Query: 250 ECLTARPVALLTMAKAGLPSSSL 182
           E L  + +   T  K   PSSS+
Sbjct: 668 EMLMDKIITEGTKLKIA-PSSSI 689

>CAZA1_CHICK (P13127) F-actin capping protein alpha-1 subunit (CapZ 36/32)|
           (Beta-actinin subunit I)
          Length = 286

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = +3

Query: 246 HSLGQSHPVKLVPFNPEFLDESVMWTESGDVGKGFRCIRMVNNIRLNFDAL 398
           H+  Q +  +  P   E  D+ V+ TE GD+G G R +   N I   FD L
Sbjct: 52  HAFAQYNMDQFTPVKIEGYDDQVLITEHGDLGNG-RFLDPRNKISFKFDHL 101

>VMSA_HPBDC (P30029) Major surface antigen precursor|
          Length = 365

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -2

Query: 445 TTVVPSCTPPWSLSPLRASKL--RRMLFTMRMQRKPLPTSPL 326
           TT+ PS TPPW L P     L  + +L T  + + P P  P+
Sbjct: 148 TTIPPSSTPPWKLQPGDDPLLESKSLLETHPLYQNPEPAVPV 189

>CAZA2_CHICK (P28497) F-actin capping protein alpha-2 subunit (CapZ 36/32)|
           (Beta-actinin subunit I)
          Length = 286

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = +3

Query: 246 HSLGQSHPVKLVPFNPEFLDESVMWTESGDVGKGFRCIRMVNNIRLNFDALNGDKDHGGV 425
           H+  Q +  +  P   +  DE V+ TE GD+G G + +   N I   FD L  +      
Sbjct: 52  HAFAQYNLDQFTPVKIDGYDEQVLITEHGDLGNG-KFLDPKNKISFKFDHLRKEATDPRP 110

Query: 426 HD 431
           H+
Sbjct: 111 HE 112

>CAZA2_MONDO (Q2QL99) F-actin capping protein alpha-2 subunit (CapZ alpha-2)|
          Length = 285

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 17/67 (25%), Positives = 30/67 (44%)
 Frame = +3

Query: 246 HSLGQSHPVKLVPFNPEFLDESVMWTESGDVGKGFRCIRMVNNIRLNFDALNGDKDHGGV 425
           H+  Q +  +  P   E  +E V+ TE GD+G G + +   N +   FD L  +      
Sbjct: 51  HAFAQYNLDQFTPVKIEGYEEQVLITEHGDLGNG-KFLDPKNRVSFKFDHLRKEATDPRP 109

Query: 426 HDGTTVV 446
           ++G   +
Sbjct: 110 YEGENAI 116

>CAZA2_DIDMA (Q2QL78) F-actin capping protein alpha-2 subunit (CapZ alpha-2)|
          Length = 285

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 17/67 (25%), Positives = 30/67 (44%)
 Frame = +3

Query: 246 HSLGQSHPVKLVPFNPEFLDESVMWTESGDVGKGFRCIRMVNNIRLNFDALNGDKDHGGV 425
           H+  Q +  +  P   E  +E V+ TE GD+G G + +   N +   FD L  +      
Sbjct: 51  HAFAQYNLDQFTPVKIEGYEEQVLITEHGDLGNG-KFLDPKNRVSFKFDHLRKEATDPRP 109

Query: 426 HDGTTVV 446
           ++G   +
Sbjct: 110 YEGENAI 116

>SYK_HAEDU (Q7VLU5) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)|
           (LysRS)
          Length = 498

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 11/81 (13%)
 Frame = +3

Query: 210 AIVNKATGLAVRHSLGQ-----SHPVKLVPF------NPEFLDESVMWTESGDVGKGFRC 356
           A+VN        H L Q     +HP ++ P       NPE  D   ++    ++G GF  
Sbjct: 364 AVVNAIFEEVAEHQLIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSE 423

Query: 357 IRMVNNIRLNFDALNGDKDHG 419
           +    +    FDA    KD G
Sbjct: 424 LNDAEDQAARFDAQVAAKDAG 444

>RBL1_MOUSE (Q64701) Retinoblastoma-like protein 1 (107 kDa|
           retinoblastoma-associated protein) (PRB1) (P107)
          Length = 1063

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 6/113 (5%)
 Frame = -2

Query: 421 PPWSLSPL---RASKLRRMLFTMRMQRKPLPTSPLSVHITDSSRNSGLNGTSFTGWDWPR 251
           P   +SP+   R  ++R    ++R   +PL  SP+SVH   SS  +G       G D P+
Sbjct: 610 PMMPMSPIIHPRVKEVRTDSGSLRQDMQPL--SPISVHERYSSPAAGSAKRRLFGDDPPK 667

Query: 250 ECLTARPVA---LLTMAKAGLPSSSLIWVLKRMSLNQCWCSSRGLEGARTTLP 101
           + L  + +A    L +A + + + SL     +  L     +  G  G + T+P
Sbjct: 668 DTLMDKIMAEGTKLKIAPSSVTAESLSISPGQALLTMATTTVTGTTGRKVTVP 720

>CATA_YERPE (Q9X6B0) Peroxidase/catalase (EC 1.11.1.6) (Catalase-peroxidase)|
           (Antigen 5)
          Length = 737

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 22/58 (37%), Positives = 26/58 (44%)
 Frame = -2

Query: 256 PRECLTARPVALLTMAKAGLPSSSLIWVLKRMSLNQCWCSSRGLEGARTTLPSRTERQ 83
           P +CL A P       +AGL    L W  K  S N     + GLEGA TT P+    Q
Sbjct: 275 PEKCLGAAP------GEAGLEQQGLGWANKCGSGNGKDTITSGLEGAWTTDPTHFTMQ 326

>Y2972_PSEAE (Q9HZN2) Maf-like protein PA2972|
          Length = 192

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
 Frame = +3

Query: 87  LSVRDGNVVLAPSNPRDEHQHWFKDMRFSTQIKDEEGNPAFAIVNKATGLAVRHSLGQSH 266
           ++V DGN++  P  P           R   Q++D  G      V   TGLA+ +S  +  
Sbjct: 71  VAVLDGNILGKPHTPE----------RAIQQLRDASGKS----VTFLTGLALLNSASRRI 116

Query: 267 PVKLVPFNPEF--LDES 311
            V  VPF   F  LDES
Sbjct: 117 QVACVPFTVHFRHLDES 133


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,832,027
Number of Sequences: 219361
Number of extensions: 840317
Number of successful extensions: 3382
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3382
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)