ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast14b06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MUC2_RAT (Q62635) Mucin-2 precursor (Intestinal mucin 2) (Fragment) 32 0.95
2ACDE_METKA (Q8TXF6) Acetyl-CoA decarbonylase/synthase complex ep... 31 2.1
3NCA11_MOUSE (P13595) Neural cell adhesion molecule 1, 180 kDa is... 30 3.6
4PRY2_YEAST (P36110) Protein PRY2 precursor (Pathogen related in ... 30 4.7
5CRF1_ASPFU (Q8J0P4) Probable glycosidase crf1 precursor (EC 3.2.... 29 6.2
6TJAP1_HUMAN (Q5JTD0) Tight junction-associated protein 1 (Tight ... 29 8.1
7SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3... 29 8.1

>MUC2_RAT (Q62635) Mucin-2 precursor (Intestinal mucin 2) (Fragment)|
          Length = 1513

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 17/37 (45%), Positives = 19/37 (51%)
 Frame = +1

Query: 232  APATSKTSPRAWPTPSGTRSLTSTRSPAGSARRRATA 342
            +P TS TSP   PT S T   TST SP  S     T+
Sbjct: 1439 SPTTSTTSPTTSPTTSTTSPTTSTTSPTPSPTTSTTS 1475



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>ACDE_METKA (Q8TXF6) Acetyl-CoA decarbonylase/synthase complex epsilon subunit|
           (ACDS complex epsilon subunit)
          Length = 159

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 18/51 (35%), Positives = 28/51 (54%)
 Frame = -1

Query: 389 GLEHLRTLLPIDVQRTAVALLLADPAGERVEVSERVPEGVGHARGDVLEVA 237
           G+    TLL  D     V   L    G R +V++RV +G+ HAR D+++V+
Sbjct: 78  GIVEAATLLQRDAPVLGVHPDLVVFTGSRTDVTDRVLQGLRHARPDLVKVS 128



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>NCA11_MOUSE (P13595) Neural cell adhesion molecule 1, 180 kDa isoform precursor|
            (N-CAM 180) (NCAM-180)
          Length = 1115

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +1

Query: 229  KAPATSKTSPRAWPTPSGTRS-LTSTRSPAGSA 324
            KAP  SK SP   PTP+G  S L +  +PA  A
Sbjct: 938  KAPPASKASPAPTPTPAGAASPLAAVAAPATDA 970



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>PRY2_YEAST (P36110) Protein PRY2 precursor (Pathogen related in Sc 2)|
          Length = 329

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 235 PATSKTSPRAWPTPSGTRSLTSTRSPAGSARRRATA 342
           P T+ TSP    +P+ T S T+T SP  +   ++TA
Sbjct: 147 PTTTTTSPTTTTSPTTTASPTTTASPTTATTTQSTA 182



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>CRF1_ASPFU (Q8J0P4) Probable glycosidase crf1 precursor (EC 3.2.-.-) (Crh-like|
           protein) (Allergen Asp f 9)
          Length = 395

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +1

Query: 229 KAPATSK--TSPRAWPTPSGTRSLTSTRSPAGSARRRATAVRCTSMG 363
           K P+TS   TS +A PTPSGT S +++ S A       T    T  G
Sbjct: 294 KTPSTSTLATSTKATPTPSGTSSGSNSSSSAEPTTTGGTGSSNTGSG 340



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>TJAP1_HUMAN (Q5JTD0) Tight junction-associated protein 1 (Tight junction|
           protein 4) (Protein incorporated later into tight
           junctions)
          Length = 557

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 229 KAPATSKTSPRAWPTPSGTRSLTSTR 306
           + P TS T  RAWP PS +R   S +
Sbjct: 508 EGPGTSHTEGRAWPLPSSSRPQRSPK 533



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>SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3.1.150) (salAT)|
          Length = 474

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
 Frame = +3

Query: 159 LATFDLPYITFYYNQKLLLYRL----AEGAGDFQDVTARMADALGDALAYFYPLAGRI 320
           L+  D  +  +YY   +L Y      + G+ +  D    +  +L   L +FYP+AGR+
Sbjct: 32  LSLLDQCFPLYYYVPIILFYPATAANSTGSSNHHDDLDLLKSSLSKTLVHFYPMAGRM 89


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,003,317
Number of Sequences: 219361
Number of extensions: 446302
Number of successful extensions: 2385
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2382
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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