ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast13h01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472939.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1170 Score = 307 bits (155), Expect = 1e-80 Identities = 203/219 (92%) Strand = Plus / Plus Query: 89 aagggaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcagccag 148 ||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || | Sbjct: 23 aagggaagcagcagccgcacctggtgctggcgcacaagctgttcctgctctcgcacccgg 82 Query: 149 acgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaatccg 208 |||| ||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||| Sbjct: 83 acgtggacgacctcgccaaggtcgacctccgcgccgatgtcctcgccgcagtcaaatccg 142 Query: 209 atgacatggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggacgcgg 268 |||| |||||| | |||||||||||||||| ||||| |||||||||||||| |||||| | Sbjct: 143 atgatatggcgtctctgtacgagtcgctgggggccggcggcgtgctggagacggacgctg 202 Query: 269 cgctgctcgcggagatgcgcggcaggatcgaggaggaga 307 ||||||||||||||||||||||||||||||||||||||| Sbjct: 203 cgctgctcgcggagatgcgcggcaggatcgaggaggaga 241
>dbj|AK104327.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F11, full insert sequence Length = 1510 Score = 307 bits (155), Expect = 1e-80 Identities = 203/219 (92%) Strand = Plus / Plus Query: 89 aagggaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcagccag 148 ||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || | Sbjct: 144 aagggaagcagcagccgcacctggtgctggcgcacaagctgttcctgctctcgcacccgg 203 Query: 149 acgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaatccg 208 |||| ||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||| Sbjct: 204 acgtggacgacctcgccaaggtcgacctccgcgccgatgtcctcgccgcagtcaaatccg 263 Query: 209 atgacatggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggacgcgg 268 |||| |||||| | |||||||||||||||| ||||| |||||||||||||| |||||| | Sbjct: 264 atgatatggcgtctctgtacgagtcgctgggggccggcggcgtgctggagacggacgctg 323 Query: 269 cgctgctcgcggagatgcgcggcaggatcgaggaggaga 307 ||||||||||||||||||||||||||||||||||||||| Sbjct: 324 cgctgctcgcggagatgcgcggcaggatcgaggaggaga 362
>dbj|AK068887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002M12, full insert sequence Length = 1515 Score = 307 bits (155), Expect = 1e-80 Identities = 203/219 (92%) Strand = Plus / Plus Query: 89 aagggaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcagccag 148 ||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || | Sbjct: 149 aagggaagcagcagccgcacctggtgctggcgcacaagctgttcctgctctcgcacccgg 208 Query: 149 acgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaatccg 208 |||| ||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||| Sbjct: 209 acgtggacgacctcgccaaggtcgacctccgcgccgatgtcctcgccgcagtcaaatccg 268 Query: 209 atgacatggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggacgcgg 268 |||| |||||| | |||||||||||||||| ||||| |||||||||||||| |||||| | Sbjct: 269 atgatatggcgtctctgtacgagtcgctgggggccggcggcgtgctggagacggacgctg 328 Query: 269 cgctgctcgcggagatgcgcggcaggatcgaggaggaga 307 ||||||||||||||||||||||||||||||||||||||| Sbjct: 329 cgctgctcgcggagatgcgcggcaggatcgaggaggaga 367
>dbj|AB037149.1| Oryza sativa (japonica cultivar-group) OsRPN7 mRNA for 26S proteasome regulatory particle non-ATPase subunit7, complete cds Length = 1547 Score = 307 bits (155), Expect = 1e-80 Identities = 203/219 (92%) Strand = Plus / Plus Query: 89 aagggaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcagccag 148 ||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || | Sbjct: 107 aagggaagcagcagccgcacctggtgctggcgcacaagctgttcctgctctcgcacccgg 166 Query: 149 acgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaatccg 208 |||| ||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||| Sbjct: 167 acgtggacgacctcgccaaggtcgacctccgcgccgatgtcctcgccgcagtcaaatccg 226 Query: 209 atgacatggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggacgcgg 268 |||| |||||| | |||||||||||||||| ||||| |||||||||||||| |||||| | Sbjct: 227 atgatatggcgtctctgtacgagtcgctgggggccggcggcgtgctggagacggacgctg 286 Query: 269 cgctgctcgcggagatgcgcggcaggatcgaggaggaga 307 ||||||||||||||||||||||||||||||||||||||| Sbjct: 287 cgctgctcgcggagatgcgcggcaggatcgaggaggaga 325
>gb|AY107400.1| Zea mays PCO125916 mRNA sequence Length = 1443 Score = 248 bits (125), Expect = 9e-63 Identities = 194/217 (89%) Strand = Plus / Plus Query: 91 gggaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcagccagac 150 ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| || ||| Sbjct: 69 gggaagcagcagccgcacctggtactggcgcacaagctgttcctcctgtcgcaccccgac 128 Query: 151 gtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaatccgat 210 |||||||||||||||||||||| ||| |||| ||||| |||| ||||| ||||||||| Sbjct: 129 gtcgacgacctcgccaaggtcgacctacgcgctgacgtgttcgcagcagtcaaatccgat 188 Query: 211 gacatggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggacgcggcg 270 |||||||| || |||||||||||| ||||||| |||||||| ||||||| |||||||||| Sbjct: 189 gacatggcagctctgtacgagtcgttggcggcggacggcgtactggagacggacgcggcg 248 Query: 271 ctgctcgcggagatgcgcggcaggatcgaggaggaga 307 ||||| || |||||||||| ||||||||| ||||||| Sbjct: 249 ctgctggccgagatgcgcgccaggatcgacgaggaga 285
>emb|AL606998.3|OSJN00125 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000223_09, complete sequence Length = 120583 Score = 172 bits (87), Expect = 4e-40 Identities = 114/123 (92%) Strand = Plus / Plus Query: 89 aagggaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcagccag 148 ||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || | Sbjct: 38718 aagggaagcagcagccgcacctggtgctggcgcacaagctgttcctgctctcgcacccgg 38777 Query: 149 acgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaatccg 208 |||| ||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||| Sbjct: 38778 acgtggacgacctcgccaaggtcgacctccgcgccgatgtcctcgccgcagtcaaatccg 38837 Query: 209 atg 211 ||| Sbjct: 38838 atg 38840 Score = 139 bits (70), Expect = 6e-30 Identities = 88/94 (93%) Strand = Plus / Plus Query: 214 atggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggacgcggcgctg 273 |||||| | |||||||||||||||| ||||| |||||||||||||| |||||| |||||| Sbjct: 39045 atggcgtctctgtacgagtcgctgggggccggcggcgtgctggagacggacgctgcgctg 39104 Query: 274 ctcgcggagatgcgcggcaggatcgaggaggaga 307 |||||||||||||||||||||||||||||||||| Sbjct: 39105 ctcgcggagatgcgcggcaggatcgaggaggaga 39138
>emb|AL606623.3|OSJN00053 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081L15, complete sequence Length = 150864 Score = 172 bits (87), Expect = 4e-40 Identities = 114/123 (92%) Strand = Plus / Plus Query: 89 aagggaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcagccag 148 ||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || | Sbjct: 105531 aagggaagcagcagccgcacctggtgctggcgcacaagctgttcctgctctcgcacccgg 105590 Query: 149 acgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaatccg 208 |||| ||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||| Sbjct: 105591 acgtggacgacctcgccaaggtcgacctccgcgccgatgtcctcgccgcagtcaaatccg 105650 Query: 209 atg 211 ||| Sbjct: 105651 atg 105653 Score = 139 bits (70), Expect = 6e-30 Identities = 88/94 (93%) Strand = Plus / Plus Query: 214 atggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggacgcggcgctg 273 |||||| | |||||||||||||||| ||||| |||||||||||||| |||||| |||||| Sbjct: 105858 atggcgtctctgtacgagtcgctgggggccggcggcgtgctggagacggacgctgcgctg 105917 Query: 274 ctcgcggagatgcgcggcaggatcgaggaggaga 307 |||||||||||||||||||||||||||||||||| Sbjct: 105918 ctcgcggagatgcgcggcaggatcgaggaggaga 105951
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 172 bits (87), Expect = 4e-40 Identities = 114/123 (92%) Strand = Plus / Plus Query: 89 aagggaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcagccag 148 ||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || | Sbjct: 24216306 aagggaagcagcagccgcacctggtgctggcgcacaagctgttcctgctctcgcacccgg 24216365 Query: 149 acgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaatccg 208 |||| ||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||| Sbjct: 24216366 acgtggacgacctcgccaaggtcgacctccgcgccgatgtcctcgccgcagtcaaatccg 24216425 Query: 209 atg 211 ||| Sbjct: 24216426 atg 24216428 Score = 139 bits (70), Expect = 6e-30 Identities = 88/94 (93%) Strand = Plus / Plus Query: 214 atggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggacgcggcgctg 273 |||||| | |||||||||||||||| ||||| |||||||||||||| |||||| |||||| Sbjct: 24216633 atggcgtctctgtacgagtcgctgggggccggcggcgtgctggagacggacgctgcgctg 24216692 Query: 274 ctcgcggagatgcgcggcaggatcgaggaggaga 307 |||||||||||||||||||||||||||||||||| Sbjct: 24216693 ctcgcggagatgcgcggcaggatcgaggaggaga 24216726
>emb|AL442114.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811E11, complete sequence Length = 59348 Score = 172 bits (87), Expect = 4e-40 Identities = 114/123 (92%) Strand = Plus / Plus Query: 89 aagggaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcagccag 148 ||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || | Sbjct: 10781 aagggaagcagcagccgcacctggtgctggcgcacaagctgttcctgctctcgcacccgg 10840 Query: 149 acgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaatccg 208 |||| ||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||| Sbjct: 10841 acgtggacgacctcgccaaggtcgacctccgcgccgatgtcctcgccgcagtcaaatccg 10900 Query: 209 atg 211 ||| Sbjct: 10901 atg 10903 Score = 139 bits (70), Expect = 6e-30 Identities = 88/94 (93%) Strand = Plus / Plus Query: 214 atggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggacgcggcgctg 273 |||||| | |||||||||||||||| ||||| |||||||||||||| |||||| |||||| Sbjct: 11091 atggcgtctctgtacgagtcgctgggggccggcggcgtgctggagacggacgctgcgctg 11150 Query: 274 ctcgcggagatgcgcggcaggatcgaggaggaga 307 |||||||||||||||||||||||||||||||||| Sbjct: 11151 ctcgcggagatgcgcggcaggatcgaggaggaga 11184
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 155 bits (78), Expect = 1e-34 Identities = 168/198 (84%) Strand = Plus / Plus Query: 109 ctggtgctggcgcacaagctgttcctcctctcgcagccagacgtcgacgacctcgccaag 168 ||||||||||| |||||||| ||||||||||| || || ||| ||||||||||||||||| Sbjct: 23480969 ctggtgctggcccacaagctcttcctcctctcccaccccgacctcgacgacctcgccaag 23481028 Query: 169 gtcggcctccgcgacgacgtcctcgccgcagtgaaatccgatgacatggcggcgctgtac 228 |||| ||||||| ||||| ||||| ||| || || ||||||| ||||||| |||||| | Sbjct: 23481029 gtcgccctccgctccgacgccctcgacgccgtcaagtccgatggcatggcgccgctgttc 23481088 Query: 229 gagtcgctggcggccgacggcgtgctggagatggacgcggcgctgctcgcggagatgcgc 288 ||||||||||| |||| ||||| |||||| ||||| ||||||||||| ||||||||| Sbjct: 23481089 gagtcgctggccgccgcgggcgtcctggagccggacgacgcgctgctcgccgagatgcgc 23481148 Query: 289 ggcaggatcgaggaggag 306 | ||||||| |||||| Sbjct: 23481149 gcgcggatcgacgaggag 23481166 Score = 93.7 bits (47), Expect = 3e-16 Identities = 110/131 (83%) Strand = Plus / Plus Query: 109 ctggtgctggcgcacaagctgttcctcctctcgcagccagacgtcgacgacctcgccaag 168 ||||||||||| ||| |||| ||||||||||| | || ||| |||||||||||||||| Sbjct: 23410925 ctggtgctggctcacgagctcttcctcctctcccgccccgacctcgacgacctcgccaat 23410984 Query: 169 gtcggcctccgcgacgacgtcctcgccgcagtgaaatccgatgacatggcggcgctgtac 228 |||| ||||||| ||| | ||||| ||| || || ||||||| ||||||| |||||| | Sbjct: 23410985 gtcgccctccgctccgatgccctcgacgccgtcaagtccgatggcatggcgccgctgttc 23411044 Query: 229 gagtcgctggc 239 ||||||||||| Sbjct: 23411045 gagtcgctggc 23411055 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 174 cctccgcgacgacgtcctcgccgc 197 |||||||||||||| ||||||||| Sbjct: 32437097 cctccgcgacgacgacctcgccgc 32437074
>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1791_B03 Length = 166214 Score = 155 bits (78), Expect = 1e-34 Identities = 168/198 (84%) Strand = Plus / Plus Query: 109 ctggtgctggcgcacaagctgttcctcctctcgcagccagacgtcgacgacctcgccaag 168 ||||||||||| |||||||| ||||||||||| || || ||| ||||||||||||||||| Sbjct: 46652 ctggtgctggcccacaagctcttcctcctctcccaccccgacctcgacgacctcgccaag 46711 Query: 169 gtcggcctccgcgacgacgtcctcgccgcagtgaaatccgatgacatggcggcgctgtac 228 |||| ||||||| ||||| ||||| ||| || || ||||||| ||||||| |||||| | Sbjct: 46712 gtcgccctccgctccgacgccctcgacgccgtcaagtccgatggcatggcgccgctgttc 46771 Query: 229 gagtcgctggcggccgacggcgtgctggagatggacgcggcgctgctcgcggagatgcgc 288 ||||||||||| |||| ||||| |||||| ||||| ||||||||||| ||||||||| Sbjct: 46772 gagtcgctggccgccgcgggcgtcctggagccggacgacgcgctgctcgccgagatgcgc 46831 Query: 289 ggcaggatcgaggaggag 306 | ||||||| |||||| Sbjct: 46832 gcgcggatcgacgaggag 46849
>dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1653_F07, complete sequence Length = 110109 Score = 155 bits (78), Expect = 1e-34 Identities = 168/198 (84%) Strand = Plus / Plus Query: 109 ctggtgctggcgcacaagctgttcctcctctcgcagccagacgtcgacgacctcgccaag 168 ||||||||||| |||||||| ||||||||||| || || ||| ||||||||||||||||| Sbjct: 99644 ctggtgctggcccacaagctcttcctcctctcccaccccgacctcgacgacctcgccaag 99703 Query: 169 gtcggcctccgcgacgacgtcctcgccgcagtgaaatccgatgacatggcggcgctgtac 228 |||| ||||||| ||||| ||||| ||| || || ||||||| ||||||| |||||| | Sbjct: 99704 gtcgccctccgctccgacgccctcgacgccgtcaagtccgatggcatggcgccgctgttc 99763 Query: 229 gagtcgctggcggccgacggcgtgctggagatggacgcggcgctgctcgcggagatgcgc 288 ||||||||||| |||| ||||| |||||| ||||| ||||||||||| ||||||||| Sbjct: 99764 gagtcgctggccgccgcgggcgtcctggagccggacgacgcgctgctcgccgagatgcgc 99823 Query: 289 ggcaggatcgaggaggag 306 | ||||||| |||||| Sbjct: 99824 gcgcggatcgacgaggag 99841 Score = 93.7 bits (47), Expect = 3e-16 Identities = 110/131 (83%) Strand = Plus / Plus Query: 109 ctggtgctggcgcacaagctgttcctcctctcgcagccagacgtcgacgacctcgccaag 168 ||||||||||| ||| |||| ||||||||||| | || ||| |||||||||||||||| Sbjct: 29600 ctggtgctggctcacgagctcttcctcctctcccgccccgacctcgacgacctcgccaat 29659 Query: 169 gtcggcctccgcgacgacgtcctcgccgcagtgaaatccgatgacatggcggcgctgtac 228 |||| ||||||| ||| | ||||| ||| || || ||||||| ||||||| |||||| | Sbjct: 29660 gtcgccctccgctccgatgccctcgacgccgtcaagtccgatggcatggcgccgctgttc 29719 Query: 229 gagtcgctggc 239 ||||||||||| Sbjct: 29720 gagtcgctggc 29730
>dbj|AK071215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084I15, full insert sequence Length = 1371 Score = 155 bits (78), Expect = 1e-34 Identities = 168/198 (84%) Strand = Plus / Plus Query: 109 ctggtgctggcgcacaagctgttcctcctctcgcagccagacgtcgacgacctcgccaag 168 ||||||||||| |||||||| ||||||||||| || || ||| ||||||||||||||||| Sbjct: 73 ctggtgctggcccacaagctcttcctcctctcccaccccgacctcgacgacctcgccaag 132 Query: 169 gtcggcctccgcgacgacgtcctcgccgcagtgaaatccgatgacatggcggcgctgtac 228 |||| ||||||| ||||| ||||| ||| || || ||||||| ||||||| |||||| | Sbjct: 133 gtcgccctccgctccgacgccctcgacgccgtcaagtccgatggcatggcgccgctgttc 192 Query: 229 gagtcgctggcggccgacggcgtgctggagatggacgcggcgctgctcgcggagatgcgc 288 ||||||||||| |||| ||||| |||||| ||||| ||||||||||| ||||||||| Sbjct: 193 gagtcgctggccgccgcgggcgtcctggagccggacgacgcgctgctcgccgagatgcgc 252 Query: 289 ggcaggatcgaggaggag 306 | ||||||| |||||| Sbjct: 253 gcgcggatcgacgaggag 270
>gb|BT016822.1| Zea mays clone Contig655 mRNA sequence Length = 1636 Score = 121 bits (61), Expect = 1e-24 Identities = 178/217 (82%) Strand = Plus / Plus Query: 91 gggaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcagccagac 150 ||||||||| ||| ||| ||||||||||| |||||||| ||||| || || || || | Sbjct: 148 gggaagcaggagcggcacctggtgctggcccacaagctcttccttctatcccacccctcc 207 Query: 151 gtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaatccgat 210 || || |||||| ||||||||| |||||||| ||| ||||||| | | |||||||||||| Sbjct: 208 gttgatgacctctccaaggtcgccctccgcgccgaagtcctcgacaccgtgaaatccgat 267 Query: 211 gacatggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggacgcggcg 270 || |||||| |||||| |||||||||| |||| || ||||||||| |||||| ||| Sbjct: 268 gatatggcgacgctgtttgagtcgctggtcgccgcgggtgtgctggagggggacgccgcg 327 Query: 271 ctgctcgcggagatgcgcggcaggatcgaggaggaga 307 ||||| || |||||||| || ||||| || ||||||| Sbjct: 328 ctgctggccgagatgcgtgggaggattgacgaggaga 364
>gb|AY104803.1| Zea mays PCO064157 mRNA sequence Length = 1631 Score = 121 bits (61), Expect = 1e-24 Identities = 178/217 (82%) Strand = Plus / Plus Query: 91 gggaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcagccagac 150 ||||||||| ||| ||| ||||||||||| |||||||| ||||| || || || || | Sbjct: 163 gggaagcaggagcggcacctggtgctggcccacaagctcttccttctatcccacccctcc 222 Query: 151 gtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaatccgat 210 || || |||||| ||||||||| |||||||| ||| ||||||| | | |||||||||||| Sbjct: 223 gttgatgacctctccaaggtcgccctccgcgccgaagtcctcgacaccgtgaaatccgat 282 Query: 211 gacatggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggacgcggcg 270 || |||||| |||||| |||||||||| |||| || ||||||||| |||||| ||| Sbjct: 283 gatatggcgacgctgtttgagtcgctggtcgccgcgggtgtgctggagggggacgccgcg 342 Query: 271 ctgctcgcggagatgcgcggcaggatcgaggaggaga 307 ||||| || |||||||| || ||||| || ||||||| Sbjct: 343 ctgctggccgagatgcgtgggaggattgacgaggaga 379
>ref|XM_466567.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2208 Score = 93.7 bits (47), Expect = 3e-16 Identities = 110/131 (83%) Strand = Plus / Plus Query: 109 ctggtgctggcgcacaagctgttcctcctctcgcagccagacgtcgacgacctcgccaag 168 ||||||||||| ||| |||| ||||||||||| | || ||| |||||||||||||||| Sbjct: 1984 ctggtgctggctcacgagctcttcctcctctcccgccccgacctcgacgacctcgccaat 2043 Query: 169 gtcggcctccgcgacgacgtcctcgccgcagtgaaatccgatgacatggcggcgctgtac 228 |||| ||||||| ||| | ||||| ||| || || ||||||| ||||||| |||||| | Sbjct: 2044 gtcgccctccgctccgatgccctcgacgccgtcaagtccgatggcatggcgccgctgttc 2103 Query: 229 gagtcgctggc 239 ||||||||||| Sbjct: 2104 gagtcgctggc 2114
>dbj|AP006457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0038P01 Length = 148506 Score = 93.7 bits (47), Expect = 3e-16 Identities = 110/131 (83%) Strand = Plus / Plus Query: 109 ctggtgctggcgcacaagctgttcctcctctcgcagccagacgtcgacgacctcgccaag 168 ||||||||||| ||| |||| ||||||||||| | || ||| |||||||||||||||| Sbjct: 124000 ctggtgctggctcacgagctcttcctcctctcccgccccgacctcgacgacctcgccaat 124059 Query: 169 gtcggcctccgcgacgacgtcctcgccgcagtgaaatccgatgacatggcggcgctgtac 228 |||| ||||||| ||| | ||||| ||| || || ||||||| ||||||| |||||| | Sbjct: 124060 gtcgccctccgctccgatgccctcgacgccgtcaagtccgatggcatggcgccgctgttc 124119 Query: 229 gagtcgctggc 239 ||||||||||| Sbjct: 124120 gagtcgctggc 124130
>ref|NM_189491.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 609 Score = 89.7 bits (45), Expect = 5e-15 Identities = 159/197 (80%) Strand = Plus / Plus Query: 93 gaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcagccagacgt 152 ||||||| ||| ||| | |||||| || |||||||| ||||||||||| || || ||| | Sbjct: 366 gaagcaggagcagcaccgggtgctagcccacaagctcttcctcctctcccaccccgacct 425 Query: 153 cgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaatccgatga 212 | |||||||||||||||| | ||||||| ||||| ||||| ||| || || ||||||| Sbjct: 426 caacgacctcgccaaggttgccctccgctccgacgccctcgacgccgtcaagtccgatgg 485 Query: 213 catggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggacgcggcgct 272 ||||||| ||| | |||||| |||| | | |||||||||||||| ||| | ||||| Sbjct: 486 catggcgctgctatttgagtcgttggccgtcaacggcgtgctggagccggatgacgcgct 545 Query: 273 gctcgcggagatgcgcg 289 ||||| |||||||||| Sbjct: 546 gctcgtcgagatgcgcg 562
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 89.7 bits (45), Expect = 5e-15 Identities = 159/197 (80%) Strand = Plus / Plus Query: 93 gaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcagccagacgt 152 ||||||| ||| ||| | |||||| || |||||||| ||||||||||| || || ||| | Sbjct: 43069764 gaagcaggagcagcaccgggtgctagcccacaagctcttcctcctctcccaccccgacct 43069823 Query: 153 cgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaatccgatga 212 | |||||||||||||||| | ||||||| ||||| ||||| ||| || || ||||||| Sbjct: 43069824 caacgacctcgccaaggttgccctccgctccgacgccctcgacgccgtcaagtccgatgg 43069883 Query: 213 catggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggacgcggcgct 272 ||||||| ||| | |||||| |||| | | |||||||||||||| ||| | ||||| Sbjct: 43069884 catggcgctgctatttgagtcgttggccgtcaacggcgtgctggagccggatgacgcgct 43069943 Query: 273 gctcgcggagatgcgcg 289 ||||| |||||||||| Sbjct: 43069944 gctcgtcgagatgcgcg 43069960 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 ctccgcgacgacgtcctcgcc 195 ||||||||||||||||||||| Sbjct: 35646719 ctccgcgacgacgtcctcgcc 35646739 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 gtcggcctccgcgacgacgtcctc 192 ||||||||||||| |||||||||| Sbjct: 40133092 gtcggcctccgcggcgacgtcctc 40133069 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgcgacgacgtcctcgccg 196 |||||||||||||||||||| Sbjct: 3958527 ccgcgacgacgtcctcgccg 3958546
>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0459B04 Length = 142475 Score = 89.7 bits (45), Expect = 5e-15 Identities = 159/197 (80%) Strand = Plus / Plus Query: 93 gaagcagcagccgcagctggtgctggcgcacaagctgttcctcctctcgcagccagacgt 152 ||||||| ||| ||| | |||||| || |||||||| ||||||||||| || || ||| | Sbjct: 66793 gaagcaggagcagcaccgggtgctagcccacaagctcttcctcctctcccaccccgacct 66852 Query: 153 cgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtgaaatccgatga 212 | |||||||||||||||| | ||||||| ||||| ||||| ||| || || ||||||| Sbjct: 66853 caacgacctcgccaaggttgccctccgctccgacgccctcgacgccgtcaagtccgatgg 66912 Query: 213 catggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatggacgcggcgct 272 ||||||| ||| | |||||| |||| | | |||||||||||||| ||| | ||||| Sbjct: 66913 catggcgctgctatttgagtcgttggccgtcaacggcgtgctggagccggatgacgcgct 66972 Query: 273 gctcgcggagatgcgcg 289 ||||| |||||||||| Sbjct: 66973 gctcgtcgagatgcgcg 66989
>ref|XM_483067.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1470 Score = 63.9 bits (32), Expect = 3e-07 Identities = 119/148 (80%) Strand = Plus / Minus Query: 142 cagccagacgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtg 201 ||||| ||| |||||||| | |||||||||| ||||| | ||||| ||||| | | || Sbjct: 467 cagcccgacctcgacgacattgccaaggtcgccctccactccgacgccctcgacaccgtc 408 Query: 202 aaatccgatgacatggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatg 261 || ||||||| ||||||| | ||| |||||||||||| ||| |||||||||||| | Sbjct: 407 aagtccgatggcatggcgctgttgttcgagtcgctggccgccacgggcgtgctggagccg 348 Query: 262 gacgcggcgctgctcgcggagatgcgcg 289 |||| ||||||||| | |||||||||| Sbjct: 347 gacgacgcgctgctcaccgagatgcgcg 320
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 63.9 bits (32), Expect = 3e-07 Identities = 119/148 (80%) Strand = Plus / Minus Query: 142 cagccagacgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtg 201 ||||| ||| |||||||| | |||||||||| ||||| | ||||| ||||| | | || Sbjct: 24130452 cagcccgacctcgacgacattgccaaggtcgccctccactccgacgccctcgacaccgtc 24130393 Query: 202 aaatccgatgacatggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatg 261 || ||||||| ||||||| | ||| |||||||||||| ||| |||||||||||| | Sbjct: 24130392 aagtccgatggcatggcgctgttgttcgagtcgctggccgccacgggcgtgctggagccg 24130333 Query: 262 gacgcggcgctgctcgcggagatgcgcg 289 |||| ||||||||| | |||||||||| Sbjct: 24130332 gacgacgcgctgctcaccgagatgcgcg 24130305
>dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0028A08 Length = 150818 Score = 63.9 bits (32), Expect = 3e-07 Identities = 119/148 (80%) Strand = Plus / Minus Query: 142 cagccagacgtcgacgacctcgccaaggtcggcctccgcgacgacgtcctcgccgcagtg 201 ||||| ||| |||||||| | |||||||||| ||||| | ||||| ||||| | | || Sbjct: 83938 cagcccgacctcgacgacattgccaaggtcgccctccactccgacgccctcgacaccgtc 83879 Query: 202 aaatccgatgacatggcggcgctgtacgagtcgctggcggccgacggcgtgctggagatg 261 || ||||||| ||||||| | ||| |||||||||||| ||| |||||||||||| | Sbjct: 83878 aagtccgatggcatggcgctgttgttcgagtcgctggccgccacgggcgtgctggagccg 83819 Query: 262 gacgcggcgctgctcgcggagatgcgcg 289 |||| ||||||||| | |||||||||| Sbjct: 83818 gacgacgcgctgctcaccgagatgcgcg 83791
>gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0027P09, complete sequence Length = 171861 Score = 48.1 bits (24), Expect = 0.017 Identities = 30/32 (93%) Strand = Plus / Minus Query: 234 gctggcggccgacggcgtgctggagatggacg 265 ||||||||| ||||||||||||| |||||||| Sbjct: 113122 gctggcggcggacggcgtgctggtgatggacg 113091
>gb|AF449411.1| Myxococcus xanthus cosmid pREG3E1, complete sequence Length = 36615 Score = 48.1 bits (24), Expect = 0.017 Identities = 30/32 (93%) Strand = Plus / Plus Query: 261 ggacgcggcgctgctcgcggagatgcgcggca 292 |||||||||| ||||||||||| ||||||||| Sbjct: 916 ggacgcggcggtgctcgcggagctgcgcggca 947
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 48.1 bits (24), Expect = 0.017 Identities = 30/32 (93%) Strand = Plus / Minus Query: 234 gctggcggccgacggcgtgctggagatggacg 265 ||||||||| ||||||||||||| |||||||| Sbjct: 15703441 gctggcggcggacggcgtgctggtgatggacg 15703410 Score = 46.1 bits (23), Expect = 0.066 Identities = 26/27 (96%) Strand = Plus / Minus Query: 152 tcgacgacctcgccaaggtcggcctcc 178 |||||||||||||||||| |||||||| Sbjct: 18930410 tcgacgacctcgccaaggacggcctcc 18930384
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 48.1 bits (24), Expect = 0.017 Identities = 30/32 (93%) Strand = Plus / Minus Query: 234 gctggcggccgacggcgtgctggagatggacg 265 ||||||||| ||||||||||||| |||||||| Sbjct: 15790818 gctggcggcggacggcgtgctggtgatggacg 15790787 Score = 46.1 bits (23), Expect = 0.066 Identities = 26/27 (96%) Strand = Plus / Minus Query: 152 tcgacgacctcgccaaggtcggcctcc 178 |||||||||||||||||| |||||||| Sbjct: 19089232 tcgacgacctcgccaaggacggcctcc 19089206
>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08, complete sequence Length = 197156 Score = 46.1 bits (23), Expect = 0.066 Identities = 26/27 (96%) Strand = Plus / Minus Query: 152 tcgacgacctcgccaaggtcggcctcc 178 |||||||||||||||||| |||||||| Sbjct: 194426 tcgacgacctcgccaaggacggcctcc 194400
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 46.1 bits (23), Expect = 0.066 Identities = 26/27 (96%) Strand = Plus / Minus Query: 152 tcgacgacctcgccaaggtcggcctcc 178 |||||||||||||||||| |||||||| Sbjct: 33781 tcgacgacctcgccaaggacggcctcc 33755
>gb|AY022264.1| Oryza sativa microsatellite MRG4589 containing (TG)X33, closest to marker S10585, genomic sequence Length = 266 Score = 44.1 bits (22), Expect = 0.26 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atggcggcgctgtacgagtcgctggcggccgacggcgt 251 |||||| | |||||||||||||||| ||||| |||||| Sbjct: 229 atggcgtctctgtacgagtcgctgggggccggcggcgt 266 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 tcctcgccgcagtgaaatccgatg 211 ||||||||||||| |||||||||| Sbjct: 1 tcctcgccgcagtcaaatccgatg 24
>gb|AY019832.1| Oryza sativa microsatellite MRG2157 containing (CA)X33, closest to marker S10585, genomic sequence Length = 266 Score = 44.1 bits (22), Expect = 0.26 Identities = 34/38 (89%) Strand = Plus / Minus Query: 214 atggcggcgctgtacgagtcgctggcggccgacggcgt 251 |||||| | |||||||||||||||| ||||| |||||| Sbjct: 38 atggcgtctctgtacgagtcgctgggggccggcggcgt 1 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 tcctcgccgcagtgaaatccgatg 211 ||||||||||||| |||||||||| Sbjct: 266 tcctcgccgcagtcaaatccgatg 243
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 gcagcagccgcagctggtgctg 117 |||||||||||||||||||||| Sbjct: 20713297 gcagcagccgcagctggtgctg 20713276
>dbj|AP003682.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427B07 Length = 172058 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 gcagcagccgcagctggtgctg 117 |||||||||||||||||||||| Sbjct: 135704 gcagcagccgcagctggtgctg 135683
>ref|NM_190458.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2334 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 ctccgcgacgacgtcctcgcc 195 ||||||||||||||||||||| Sbjct: 343 ctccgcgacgacgtcctcgcc 363
>gb|AY580296.1| Priapulus caudatus fructose-bisphosphate aldolase mRNA, partial cds Length = 588 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ctccgcgacgacgtcctcgcc 195 ||||||||||||||||||||| Sbjct: 117 ctccgcgacgacgtcctcgcc 97
>gb|AC146613.3| Mus musculus BAC clone RP23-36P1 from chromosome 18, complete sequence Length = 197939 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ctctctcttcccccatctctt 21 ||||||||||||||||||||| Sbjct: 19609 ctctctcttcccccatctctt 19589
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 239 cggccgacggcgtgctggagatggacgcg 267 |||||||||||||||||| ||| |||||| Sbjct: 292966 cggccgacggcgtgctggtgatcgacgcg 292994
>gb|AC131736.2| Mus musculus BAC clone RP23-104E2 from 18, complete sequence Length = 180201 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ctctctcttcccccatctctt 21 ||||||||||||||||||||| Sbjct: 151460 ctctctcttcccccatctctt 151440
>gb|AC162857.5| Mus musculus chromosome 15, clone RP23-333C11, complete sequence Length = 224913 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ctctctcttcccccatctctt 21 ||||||||||||||||||||| Sbjct: 150039 ctctctcttcccccatctctt 150059
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 acgacctcgccaaggtcggcc 175 ||||||||||||||||||||| Sbjct: 3123313 acgacctcgccaaggtcggcc 3123293
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 acgacctcgccaaggtcggcc 175 ||||||||||||||||||||| Sbjct: 991 acgacctcgccaaggtcggcc 1011
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cgtgctggagatggacgcggc 269 ||||||||||||||||||||| Sbjct: 5409982 cgtgctggagatggacgcggc 5409962
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 tccgcgacgacgtcctcgccg 196 ||||||||||||||||||||| Sbjct: 3291309 tccgcgacgacgtcctcgccg 3291289
>gb|AC102408.10| Mus musculus chromosome 15, clone RP24-351C14, complete sequence Length = 190773 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ctctctcttcccccatctctt 21 ||||||||||||||||||||| Sbjct: 135212 ctctctcttcccccatctctt 135192
>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460C04 Length = 189043 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 ctccgcgacgacgtcctcgcc 195 ||||||||||||||||||||| Sbjct: 50056 ctccgcgacgacgtcctcgcc 50076
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cgtgctggagatggacgcggc 269 ||||||||||||||||||||| Sbjct: 8908611 cgtgctggagatggacgcggc 8908591
>dbj|AK068489.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155B12, full insert sequence Length = 2694 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 ctccgcgacgacgtcctcgcc 195 ||||||||||||||||||||| Sbjct: 276 ctccgcgacgacgtcctcgcc 296
>emb|AM181565.1| Microbacterium arborescens partial rpoB gene for RNA polymerase subunit B, type strain DSM 20754 Length = 1080 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 acgacctcgccaaggtcggcc 175 ||||||||||||||||||||| Sbjct: 458 acgacctcgccaaggtcggcc 478
>emb|AM181564.1| Microbacterium aerolatum partial rpoB gene for RNA polymerase subunit B, type strain DSM 14217 Length = 1172 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 acgacctcgccaaggtcggcc 175 ||||||||||||||||||||| Sbjct: 465 acgacctcgccaaggtcggcc 485
>emb|AM181580.1| Microbacterium laevaniformans partial rpoB gene for RNA polymerase subunit B, type strain DSM 20140 Length = 1086 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 acgacctcgccaaggtcggcc 175 ||||||||||||||||||||| Sbjct: 462 acgacctcgccaaggtcggcc 482
>emb|AM181574.1| Microbacterium imperiale partial rpoB gene for RNA polymerase subunit B, type strain DSM 20530 Length = 1085 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 acgacctcgccaaggtcggcc 175 ||||||||||||||||||||| Sbjct: 461 acgacctcgccaaggtcggcc 481
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 gaagcagcagccgcagctggtgctg 117 |||||| |||||||||||||||||| Sbjct: 97932 gaagcaccagccgcagctggtgctg 97956
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 gcagccgcagctggtgctggc 119 ||||||||||||||||||||| Sbjct: 4431749 gcagccgcagctggtgctggc 4431729
>gb|AY623104.1| Nonomuraea sp. ATCC 39727 rifampicin-resistant RNA polymerase beta chain (rpoB) gene, rpoB-R allele, complete cds Length = 3450 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 acgacctcgccaaggtcggcc 175 ||||||||||||||||||||| Sbjct: 866 acgacctcgccaaggtcggcc 886
>emb|AL669910.15| Mouse DNA sequence from clone RP23-119H5 on chromosome 2, complete sequence Length = 158275 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 90 agggaagcagcagccgcagctggtg 114 |||||||||||||| |||||||||| Sbjct: 6177 agggaagcagcagcagcagctggtg 6153
>ref|XM_550315.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3282 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgcgacgacgtcctcgccg 196 |||||||||||||||||||| Sbjct: 906 ccgcgacgacgtcctcgccg 925
>ref|XM_467988.1| Oryza sativa (japonica cultivar-group), mRNA Length = 869 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 174 cctccgcgacgacgtcctcgccgc 197 |||||||||||||| ||||||||| Sbjct: 112 cctccgcgacgacgacctcgccgc 89
>ref|XM_463173.1| Oryza sativa (japonica cultivar-group), mRNA Length = 432 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 gcagccagacgtcgacgacctcgc 164 |||||| ||||||||||||||||| Sbjct: 284 gcagccggacgtcgacgacctcgc 307
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 4.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 265 gcggcgctgctcgcggagatgcgcggcaggatcgag 300 |||||||||||||||| || ||||| | |||||||| Sbjct: 3126016 gcggcgctgctcgcggtgacgcgcgcccggatcgag 3125981
>ref|XM_463623.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1182 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 gtcggcctccgcgacgacgtcctc 192 ||||||||||||| |||||||||| Sbjct: 901 gtcggcctccgcggcgacgtcctc 924
>gb|AC121363.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0036C12, complete sequence Length = 145517 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctcttcccccatctct 20 |||||||||||||||||||| Sbjct: 121766 ctctctcttcccccatctct 121785 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctcttcccccatctct 20 |||||||||||||||||||| Sbjct: 121702 ctctctcttcccccatctct 121721
>gb|AC104272.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1045_C06, complete sequence Length = 143130 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctcttcccccatctct 20 |||||||||||||||||||| Sbjct: 10152 ctctctcttcccccatctct 10171 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctcttcccccatctct 20 |||||||||||||||||||| Sbjct: 10088 ctctctcttcccccatctct 10107
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 acgcggcgctgctcgcggag 282 |||||||||||||||||||| Sbjct: 2449644 acgcggcgctgctcgcggag 2449625
>gb|AC102856.5| Mus musculus chromosome 8, clone RP24-500H8, complete sequence Length = 195286 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctctcttcccccatctct 20 |||||||||||||||||||| Sbjct: 191030 ctctctcttcccccatctct 191011
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 cgctggcggccgacggcgtgctgg 256 |||||||||||| ||||||||||| Sbjct: 1188387 cgctggcggccggcggcgtgctgg 1188410
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 ccgcgacgacgtcctcgccg 196 |||||||||||||||||||| Sbjct: 1992136 ccgcgacgacgtcctcgccg 1992117
>ref|XM_593416.2| PREDICTED: Bos taurus similar to stromal antigen 3 (LOC515399), partial mRNA Length = 3164 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gtgctggagatggacgcggc 269 |||||||||||||||||||| Sbjct: 1786 gtgctggagatggacgcggc 1805
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 acgcggcgctgctcgcggag 282 |||||||||||||||||||| Sbjct: 3734965 acgcggcgctgctcgcggag 3734984
>gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome Length = 1044459 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 agggaagcagcagccgcagctggtgctg 117 |||||||||||||| ||||| ||||||| Sbjct: 479149 agggaagcagcagctgcagcaggtgctg 479122
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 agcagccgcagctggtgctggcgc 121 ||||||||| |||||||||||||| Sbjct: 4778097 agcagccgctgctggtgctggcgc 4778120
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 gcagccagacgtcgacgacctcgc 164 |||||| ||||||||||||||||| Sbjct: 22935273 gcagccggacgtcgacgacctcgc 22935296
>gb|AC155946.7| Mus musculus 6 BAC RP24-483K3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 178502 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctcttcccccatctct 20 |||||||||||||||||||| Sbjct: 144013 ctctctcttcccccatctct 144032
>emb|CR730818.2|CNS0GQUF Tetraodon nigroviridis full-length cDNA Length = 1083 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 agcagcagccgcagctggtgctgg 118 ||||||||| |||||||||||||| Sbjct: 298 agcagcagcagcagctggtgctgg 321
>emb|CR730314.2|CNS0GQGF Tetraodon nigroviridis full-length cDNA Length = 1038 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 agcagcagccgcagctggtgctgg 118 ||||||||| |||||||||||||| Sbjct: 277 agcagcagcagcagctggtgctgg 300
>emb|CR727137.2|CNS0GO07 Tetraodon nigroviridis full-length cDNA Length = 1104 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 agcagcagccgcagctggtgctgg 118 ||||||||| |||||||||||||| Sbjct: 321 agcagcagcagcagctggtgctgg 344
>emb|CR726105.2|CNS0GN7J Tetraodon nigroviridis full-length cDNA Length = 1037 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 agcagcagccgcagctggtgctgg 118 ||||||||| |||||||||||||| Sbjct: 267 agcagcagcagcagctggtgctgg 290
>emb|CR724518.2|CNS0GLZG Tetraodon nigroviridis full-length cDNA Length = 1107 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 agcagcagccgcagctggtgctgg 118 ||||||||| |||||||||||||| Sbjct: 322 agcagcagcagcagctggtgctgg 345
>gb|AC136972.3| Oryza sativa chromosome 3 BAC OSJNBb0007E22 genomic sequence, complete sequence Length = 184783 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 gcagccagacgtcgacgacctcgc 164 |||||| ||||||||||||||||| Sbjct: 137803 gcagccggacgtcgacgacctcgc 137826
>emb|CR700026.2|CNS0G33A Tetraodon nigroviridis full-length cDNA Length = 1052 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 agcagcagccgcagctggtgctgg 118 ||||||||| |||||||||||||| Sbjct: 268 agcagcagcagcagctggtgctgg 291
>emb|CR692243.2|CNS0FX33 Tetraodon nigroviridis full-length cDNA Length = 1051 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 agcagcagccgcagctggtgctgg 118 ||||||||| |||||||||||||| Sbjct: 268 agcagcagcagcagctggtgctgg 291
>emb|CR677350.2|CNS0FLLU Tetraodon nigroviridis full-length cDNA Length = 1075 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 agcagcagccgcagctggtgctgg 118 ||||||||| |||||||||||||| Sbjct: 313 agcagcagcagcagctggtgctgg 336
>emb|CR675886.2|CNS0FKHG Tetraodon nigroviridis full-length cDNA Length = 1075 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 agcagcagccgcagctggtgctgg 118 ||||||||| |||||||||||||| Sbjct: 291 agcagcagcagcagctggtgctgg 314
>emb|CR670220.2|CNS0FG42 Tetraodon nigroviridis full-length cDNA Length = 1093 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 agcagcagccgcagctggtgctgg 118 ||||||||| |||||||||||||| Sbjct: 311 agcagcagcagcagctggtgctgg 334
>emb|CR666358.2|CNS0FD4S Tetraodon nigroviridis full-length cDNA Length = 1124 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 agcagcagccgcagctggtgctgg 118 ||||||||| |||||||||||||| Sbjct: 309 agcagcagcagcagctggtgctgg 332
>gb|AC110920.10| Mus musculus chromosome 12, clone RP23-328I23, complete sequence Length = 223308 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctctcttcccccatctct 20 |||||||||||||||||||| Sbjct: 220055 ctctctcttcccccatctct 220036
>gb|AC087063.20| Mus musculus strain C57BL/6J clone rp23-20o47 map 7, complete sequence Length = 241381 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctcttcccccatctct 20 |||||||||||||||||||| Sbjct: 106940 ctctctcttcccccatctct 106959
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 cgacgacgtcctcgccgcag 199 |||||||||||||||||||| Sbjct: 3402909 cgacgacgtcctcgccgcag 3402890
>gb|AC138435.2| Artibeus jamaicensis clone 21H16, complete sequence Length = 95559 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctcttcccccatctct 20 |||||||||||||||||||| Sbjct: 33345 ctctctcttcccccatctct 33364
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13 Length = 349306 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 cgctggcggccgacggcgtgctgg 256 |||||||||||| ||||||||||| Sbjct: 154554 cgctggcggccggcggcgtgctgg 154577
>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16 Length = 349737 Score = 40.1 bits (20), Expect = 4.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 270 gctgctcgcggagatgcgcggcaggatcgaggagga 305 |||| |||| |||||||||||| ||||| ||||||| Sbjct: 349447 gctggtcgccgagatgcgcggccggatcaaggagga 349412
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 acgcggcgctgctcgcggag 282 |||||||||||||||||||| Sbjct: 3475284 acgcggcgctgctcgcggag 3475303
>emb|BX571870.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 12/17 Length = 348505 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 250 gtgctggagatggacgcggcgctg 273 |||||||||||||| ||||||||| Sbjct: 9031 gtgctggagatggaggcggcgctg 9008
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 cgctggcggccgacggcgtgctgg 256 |||||||||||| ||||||||||| Sbjct: 201789 cgctggcggccggcggcgtgctgg 201812
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 cgcagccagacgtcgacgacctcg 163 ||||||||| |||||||||||||| Sbjct: 273575 cgcagccagccgtcgacgacctcg 273552 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 cgtcgacgacctcgccaagg 169 |||||||||||||||||||| Sbjct: 270855 cgtcgacgacctcgccaagg 270836
>gb|AC156608.10| Mus musculus chromosome 8, clone RP23-303A11, complete sequence Length = 229633 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctcttcccccatctct 20 |||||||||||||||||||| Sbjct: 216304 ctctctcttcccccatctct 216323
>gb|AE012498.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 406 of 460 of the complete genome Length = 12898 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 gccgacggcgtgctggagat 260 |||||||||||||||||||| Sbjct: 7724 gccgacggcgtgctggagat 7743
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 acgcggcgctgctcgcggag 282 |||||||||||||||||||| Sbjct: 2155116 acgcggcgctgctcgcggag 2155135
>gb|DP000001.1| Artibeus jamaicensis target 1 genomic scaffold Length = 584809 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctcttcccccatctct 20 |||||||||||||||||||| Sbjct: 522595 ctctctcttcccccatctct 522614
>gb|AF165627.1|AF165627 Lama glama tumor necrosis factor-alpha gene, partial sequence Length = 486 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctctcttcccccatctct 20 |||||||||||||||||||| Sbjct: 121 ctctctcttcccccatctct 102
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 gccgacggcgtgctggagat 260 |||||||||||||||||||| Sbjct: 4548245 gccgacggcgtgctggagat 4548264
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 tcggcctccgcgacgacgtcctcg 193 |||||||| ||||||||||||||| Sbjct: 2460419 tcggcctctgcgacgacgtcctcg 2460396
>emb|CR378098.1| Pinus pinaster SSR, clone PPB2E08 Length = 400 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctctcttcccccatctct 20 |||||||||||||||||||| Sbjct: 185 ctctctcttcccccatctct 166
>emb|CR378038.1| Pinus pinaster SSR, clone PPB1F06 Length = 563 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctcttcccccatctct 20 |||||||||||||||||||| Sbjct: 459 ctctctcttcccccatctct 478
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctcttcccccatctct 20 |||||||||||||||||||| Sbjct: 249909 ctctctcttcccccatctct 249928
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctcttcccccatctct 20 |||||||||||||||||||| Sbjct: 16797656 ctctctcttcccccatctct 16797675 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctcttcccccatctct 20 |||||||||||||||||||| Sbjct: 16797592 ctctctcttcccccatctct 16797611
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 gcagccagacgtcgacgacctcgc 164 |||||| ||||||||||||||||| Sbjct: 22928301 gcagccggacgtcgacgacctcgc 22928324
>gb|AC158651.12| Mus musculus BAC RP24-68I7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 190089 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctcttcccccatctct 20 |||||||||||||||||||| Sbjct: 44935 ctctctcttcccccatctct 44954
>gb|AC154582.2| Mus musculus BAC clone RP23-381N7 from chromosome 12, complete sequence Length = 194302 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctcttcccccatctct 20 |||||||||||||||||||| Sbjct: 163367 ctctctcttcccccatctct 163386
>gb|AC110926.5| Homo sapiens BAC clone RP11-313N8 from 2, complete sequence Length = 193648 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gcagccgcagctggtgctgg 118 |||||||||||||||||||| Sbjct: 81266 gcagccgcagctggtgctgg 81247
>gb|AC092207.4| Homo sapiens BAC clone RP11-321M15 from 2, complete sequence Length = 89871 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gcagccgcagctggtgctgg 118 |||||||||||||||||||| Sbjct: 49454 gcagccgcagctggtgctgg 49435
>gb|AC019206.4| Homo sapiens BAC clone RP11-401N16 from 2, complete sequence Length = 207818 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctctcttcccccatctct 20 |||||||||||||||||||| Sbjct: 149190 ctctctcttcccccatctct 149171
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0678F11 Length = 154292 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 gtcggcctccgcgacgacgtcctc 192 ||||||||||||| |||||||||| Sbjct: 76176 gtcggcctccgcggcgacgtcctc 76153
>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0013F10 Length = 163095 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgcgacgacgtcctcgccg 196 |||||||||||||||||||| Sbjct: 80431 ccgcgacgacgtcctcgccg 80450
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 gcagcagccgcagctggtgctggc 119 |||||||||| ||||||||||||| Sbjct: 231732 gcagcagccggagctggtgctggc 231755
>gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome Length = 1042519 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 agggaagcagcagccgcagctggtgctg 117 |||||||||||||| ||||| ||||||| Sbjct: 476791 agggaagcagcagctgcagcaggtgctg 476764
>dbj|AP006058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0066B16 Length = 190143 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctcttcccccatctct 20 |||||||||||||||||||| Sbjct: 145407 ctctctcttcccccatctct 145426
>dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1767_D02 Length = 139145 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 174 cctccgcgacgacgtcctcgccgc 197 |||||||||||||| ||||||||| Sbjct: 98610 cctccgcgacgacgacctcgccgc 98587
>dbj|AP004080.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1079_F11 Length = 122402 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 174 cctccgcgacgacgtcctcgccgc 197 |||||||||||||| ||||||||| Sbjct: 40490 cctccgcgacgacgacctcgccgc 40467
>dbj|AK107987.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-F02, full insert sequence Length = 869 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 174 cctccgcgacgacgtcctcgccgc 197 |||||||||||||| ||||||||| Sbjct: 112 cctccgcgacgacgacctcgccgc 89
>dbj|AK066552.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074K05, full insert sequence Length = 1419 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 gtcggcctccgcgacgacgtcctc 192 ||||||||||||| |||||||||| Sbjct: 1017 gtcggcctccgcggcgacgtcctc 1040
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 acgcggcgctgctcgcggag 282 |||||||||||||||||||| Sbjct: 1387645 acgcggcgctgctcgcggag 1387626
>gb|AY884127.1| Chlamydia trachomatis strain 404 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5250 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 agggaagcagcagccgcagctggtgctg 117 |||||||||||||| ||||| ||||||| Sbjct: 2453 agggaagcagcagctgcagcaggtgctg 2426
>gb|AY884126.1| Chlamydia trachomatis strain TW-396 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5259 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 agggaagcagcagccgcagctggtgctg 117 |||||||||||||| ||||| ||||||| Sbjct: 2453 agggaagcagcagctgcagcaggtgctg 2426
>gb|AY884125.1| Chlamydia trachomatis strain 434 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5250 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 agggaagcagcagccgcagctggtgctg 117 |||||||||||||| ||||| ||||||| Sbjct: 2453 agggaagcagcagctgcagcaggtgctg 2426
>gb|AY884124.1| Chlamydia trachomatis strain 440 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5250 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 agggaagcagcagccgcagctggtgctg 117 |||||||||||||| ||||| ||||||| Sbjct: 2453 agggaagcagcagctgcagcaggtgctg 2426
>gb|AY884123.1| Chlamydia trachomatis strain UW-31 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5256 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 agggaagcagcagccgcagctggtgctg 117 |||||||||||||| ||||| ||||||| Sbjct: 2450 agggaagcagcagctgcagcaggtgctg 2423
>gb|AY884122.1| Chlamydia trachomatis strain UW-92 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5256 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 agggaagcagcagccgcagctggtgctg 117 |||||||||||||| ||||| ||||||| Sbjct: 2450 agggaagcagcagctgcagcaggtgctg 2423
>gb|AY884121.1| Chlamydia trachomatis strain UW-36 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5256 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 agggaagcagcagccgcagctggtgctg 117 |||||||||||||| ||||| ||||||| Sbjct: 2450 agggaagcagcagctgcagcaggtgctg 2423
>gb|AY884119.1| Chlamydia trachomatis strain UW-12 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5256 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 agggaagcagcagccgcagctggtgctg 117 |||||||||||||| ||||| ||||||| Sbjct: 2450 agggaagcagcagctgcagcaggtgctg 2423
>gb|AY884118.1| Chlamydia trachomatis strain UW-4 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5256 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 agggaagcagcagccgcagctggtgctg 117 |||||||||||||| ||||| ||||||| Sbjct: 2450 agggaagcagcagctgcagcaggtgctg 2423
>gb|AY884117.1| Chlamydia trachomatis strain UW-57 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5256 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 agggaagcagcagccgcagctggtgctg 117 |||||||||||||| ||||| ||||||| Sbjct: 2450 agggaagcagcagctgcagcaggtgctg 2423
>gb|AY884116.1| Chlamydia trachomatis strain IC-Cal3 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5259 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 agggaagcagcagccgcagctggtgctg 117 |||||||||||||| ||||| ||||||| Sbjct: 2453 agggaagcagcagctgcagcaggtgctg 2426
>gb|AY884115.1| Chlamydia trachomatis strain Bour polymorphic membrane protein B (pmpB) gene, complete cds Length = 5259 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 agggaagcagcagccgcagctggtgctg 117 |||||||||||||| ||||| ||||||| Sbjct: 2453 agggaagcagcagctgcagcaggtgctg 2426
>gb|AY884114.1| Chlamydia trachomatis strain TW-448 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5259 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 agggaagcagcagccgcagctggtgctg 117 |||||||||||||| ||||| ||||||| Sbjct: 2453 agggaagcagcagctgcagcaggtgctg 2426
>gb|AY884113.1| Chlamydia trachomatis strain UW-3 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5256 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 agggaagcagcagccgcagctggtgctg 117 |||||||||||||| ||||| ||||||| Sbjct: 2450 agggaagcagcagctgcagcaggtgctg 2423
>gb|AY884112.1| Chlamydia trachomatis strain TW-3 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5256 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 agggaagcagcagccgcagctggtgctg 117 |||||||||||||| ||||| ||||||| Sbjct: 2450 agggaagcagcagctgcagcaggtgctg 2423
>gb|AY884111.1| Chlamydia trachomatis strain Apache-2 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5256 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 agggaagcagcagccgcagctggtgctg 117 |||||||||||||| ||||| ||||||| Sbjct: 2450 agggaagcagcagctgcagcaggtgctg 2423
>gb|AY884110.1| Chlamydia trachomatis strain TW-5 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5256 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 agggaagcagcagccgcagctggtgctg 117 |||||||||||||| ||||| ||||||| Sbjct: 2450 agggaagcagcagctgcagcaggtgctg 2423
>gb|AY884109.1| Chlamydia trachomatis strain HAR-13 polymorphic membrane protein B (pmpB) gene, complete cds Length = 5256 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 agggaagcagcagccgcagctggtgctg 117 |||||||||||||| ||||| ||||||| Sbjct: 2450 agggaagcagcagctgcagcaggtgctg 2423
>emb|CR974484.9| Mouse DNA sequence from clone RP23-1D11 on chromosome 12, complete sequence Length = 203805 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctcttcccccatctct 20 |||||||||||||||||||| Sbjct: 168905 ctctctcttcccccatctct 168924
>emb|AL606922.5| Mouse DNA sequence from clone RP23-149E24 on chromosome 4, complete sequence Length = 191957 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctcttcccccatctct 20 |||||||||||||||||||| Sbjct: 134472 ctctctcttcccccatctct 134491 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,862,384 Number of Sequences: 3902068 Number of extensions: 1862384 Number of successful extensions: 53857 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 144 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 50779 Number of HSP's gapped (non-prelim): 3076 length of query: 311 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 289 effective length of database: 17,147,199,772 effective search space: 4955540734108 effective search space used: 4955540734108 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
