ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast13g04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1KDSB_CHLCV (Q822T3) 3-deoxy-manno-octulosonate cytidylyltransfer... 81 9e-16
2KDSB_PSESM (Q87YF7) 3-deoxy-manno-octulosonate cytidylyltransfer... 81 1e-15
3KDSB_CHLTR (Q59320) 3-deoxy-manno-octulosonate cytidylyltransfer... 80 2e-15
4KDSB_CHLMU (Q9PKL1) 3-deoxy-manno-octulosonate cytidylyltransfer... 79 4e-15
5KDSB_CHLPN (Q9Z8U9) 3-deoxy-manno-octulosonate cytidylyltransfer... 78 1e-14
6KDSB_HAEIN (P44490) 3-deoxy-manno-octulosonate cytidylyltransfer... 74 2e-13
7KDSB_PSEPK (Q88LM7) 3-deoxy-manno-octulosonate cytidylyltransfer... 73 3e-13
8KDSB_PSEAE (Q9HZM5) 3-deoxy-manno-octulosonate cytidylyltransfer... 71 1e-12
9KDSB_PASMU (P57883) 3-deoxy-manno-octulosonate cytidylyltransfer... 71 1e-12
10KPSU1_ECOLI (P42215) 3-deoxy-manno-octulosonate cytidylyltransfe... 70 2e-12
11KDSB_VIBVY (Q7MJ10) 3-deoxy-manno-octulosonate cytidylyltransfer... 70 3e-12
12KDSB_VIBVU (Q8DAU9) 3-deoxy-manno-octulosonate cytidylyltransfer... 70 3e-12
13KPSU5_ECOLI (P42216) 3-deoxy-manno-octulosonate cytidylyltransfe... 70 3e-12
14KDSB_VIBCH (Q9KQX2) 3-deoxy-manno-octulosonate cytidylyltransfer... 69 4e-12
15KDSB_VIBPA (Q87R14) 3-deoxy-manno-octulosonate cytidylyltransfer... 69 4e-12
16KDSB_HAEDU (Q7VNY6) 3-deoxy-manno-octulosonate cytidylyltransfer... 65 7e-11
17KDSB_FUSNN (Q8RFA8) 3-deoxy-manno-octulosonate cytidylyltransfer... 64 2e-10
18KDSB_YERPE (Q8ZGA4) 3-deoxy-manno-octulosonate cytidylyltransfer... 64 2e-10
19KDSB_ECOL6 (Q8FJA9) 3-deoxy-manno-octulosonate cytidylyltransfer... 61 1e-09
20KDSB_ECOLI (P04951) 3-deoxy-manno-octulosonate cytidylyltransfer... 59 4e-09
21KDSB_ECO57 (Q8XDG6) 3-deoxy-manno-octulosonate cytidylyltransfer... 59 4e-09
22KDSB_SALTY (Q8ZQC0) 3-deoxy-manno-octulosonate cytidylyltransfer... 57 2e-08
23KDSB_SALTI (Q8Z800) 3-deoxy-manno-octulosonate cytidylyltransfer... 57 2e-08
24KDSB_HELPY (O25016) 3-deoxy-manno-octulosonate cytidylyltransfer... 52 6e-07
25KDSB_HELPJ (Q9ZMK4) 3-deoxy-manno-octulosonate cytidylyltransfer... 52 6e-07
26KDSB_RICCN (Q92I96) 3-deoxy-manno-octulosonate cytidylyltransfer... 47 2e-05
27KDSB_AQUAE (O66914) 3-deoxy-manno-octulosonate cytidylyltransfer... 45 6e-05
28NEUA_ECOLI (P13266) N-acylneuraminate cytidylyltransferase (EC 2... 43 3e-04
29KDSB_RICPR (Q9ZDF0) 3-deoxy-manno-octulosonate cytidylyltransfer... 42 5e-04
30NEUA_STRA3 (P0A4V0) N-acylneuraminate cytidylyltransferase (EC 2... 39 0.007
31NEUA_STRA1 (P0A4V1) N-acylneuraminate cytidylyltransferase (EC 2... 39 0.007
32NEUA_STRA5 (Q9AFG9) N-acylneuraminate cytidylyltransferase (EC 2... 38 0.009
33NEUA_NEIME (P0A0Z8) N-acylneuraminate cytidylyltransferase (EC 2... 32 0.50
34NEUA_NEIMB (P0A0Z7) N-acylneuraminate cytidylyltransferase (EC 2... 32 0.50
35TILS_AGRT5 (Q8U9L7) tRNA(Ile)-lysidine synthase (EC 6.3.4.-) (tR... 29 4.2
36KDPD_ECOLI (P21865) Sensor protein kdpD (EC 2.7.13.3) 29 4.2
37IXR1_YEAST (P33417) Intrastrand crosslink recognition protein (S... 29 5.5
38ISPD_MYCLE (Q9CCW6) 2-C-methyl-D-erythritol 4-phosphate cytidyly... 29 5.5
39HEM3_BRUSU (Q8FYI6) Porphobilinogen deaminase (EC 2.5.1.61) (PBG... 29 5.5
40HEM3_BRUME (Q8YJB0) Porphobilinogen deaminase (EC 2.5.1.61) (PBG... 29 5.5
41APOF_RAT (Q5M889) Apolipoprotein F precursor (Apo-F) (Liver rege... 29 5.5
42PYRB_LACPL (P77883) Aspartate carbamoyltransferase (EC 2.1.3.2) ... 29 5.5
43NEUA_ONCMY (Q90WG6) N-acylneuraminate cytidylyltransferase (EC 2... 28 7.2
44ZFHX2_HUMAN (Q9C0A1) Zinc finger homeobox protein 2 28 7.2
45ISPD_STAEQ (Q5HRJ7) 2-C-methyl-D-erythritol 4-phosphate cytidyly... 28 7.2
46SOCS4_MOUSE (Q91ZA6) Suppressor of cytokine signaling 4 (SOCS-4)... 28 9.4 
>KDSB_CHLCV (Q822T3) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 254

 Score = 81.3 bits (199), Expect = 9e-16
 Identities = 39/75 (52%), Positives = 54/75 (72%)
 Frame = +2

Query: 197 FRSLAVGIIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAEC 376
           F S  VG++PAR+ S+RF GKPLA ILGK +I+RT+E +  + +LD V+VATDD++I + 
Sbjct: 6   FASKKVGVLPARWGSARFTGKPLASILGKSLIRRTYENINQSIALDKVIVATDDQRIMDH 65

Query: 377 CRVFGADVVMTSVSC 421
              FG D V+TS  C
Sbjct: 66  VLDFGGDCVLTSPEC 80
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>KDSB_PSESM (Q87YF7) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 254

 Score = 80.9 bits (198), Expect = 1e-15
 Identities = 38/64 (59%), Positives = 47/64 (73%)
 Frame = +2

Query: 218 IIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRVFGAD 397
           +IPARY SSRF GKPL  I GKPM+Q  WE+    SS + VV+ATDD +I E CR FGA+
Sbjct: 8   VIPARYGSSRFPGKPLKTIAGKPMVQLVWEQAR-KSSAERVVIATDDARIVEACRAFGAE 66

Query: 398 VVMT 409
           V++T
Sbjct: 67  VLLT 70
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>KDSB_CHLTR (Q59320) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 254

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 41/73 (56%), Positives = 53/73 (72%)
 Frame = +2

Query: 203 SLAVGIIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCR 382
           S  VGI+P+R+ SSRF GKPLA ILGK ++QR++E  + + SLD VVVATDD++I +   
Sbjct: 7   SKKVGILPSRWGSSRFPGKPLAKILGKTLVQRSYENALSSQSLDCVVVATDDQRIFDHVV 66

Query: 383 VFGADVVMTSVSC 421
            FG   VMTS SC
Sbjct: 67  EFGGLCVMTSTSC 79
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>KDSB_CHLMU (Q9PKL1) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 254

 Score = 79.3 bits (194), Expect = 4e-15
 Identities = 42/73 (57%), Positives = 52/73 (71%)
 Frame = +2

Query: 203 SLAVGIIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCR 382
           S  VGI+PAR+ SSRF GKPLA ILGK +IQR++E  + + SLD VVVATDD++I +   
Sbjct: 7   SKRVGILPARWGSSRFPGKPLAKILGKTLIQRSYENALTSRSLDCVVVATDDQRIFDHVV 66

Query: 383 VFGADVVMTSVSC 421
            FG   VMT  SC
Sbjct: 67  EFGGLCVMTCESC 79
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>KDSB_CHLPN (Q9Z8U9) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 254

 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 39/79 (49%), Positives = 52/79 (65%)
 Frame = +2

Query: 185 RPRGFRSLAVGIIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEK 364
           +P     L +G++PAR+ SSR+ GKPLA I GK +IQRT+E    +S LD +VVATDD+ 
Sbjct: 2   KPEESECLCIGVLPARWNSSRYPGKPLAKIHGKSLIQRTYENASQSSLLDKIVVATDDQH 61

Query: 365 IAECCRVFGADVVMTSVSC 421
           I +    FG   VMTS +C
Sbjct: 62  IIDHVTDFGGYAVMTSPTC 80
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>KDSB_HAEIN (P44490) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 253

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 38/67 (56%), Positives = 49/67 (73%)
 Frame = +2

Query: 218 IIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRVFGAD 397
           IIPAR+ASSR  GKPLA I GKPMIQ  +E+  L S    V++ATD+E +A+  + FGA+
Sbjct: 5   IIPARFASSRLPGKPLADIKGKPMIQHVFEKA-LQSGASRVIIATDNENVADVAKSFGAE 63

Query: 398 VVMTSVS 418
           V MTSV+
Sbjct: 64  VCMTSVN 70
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>KDSB_PSEPK (Q88LM7) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 254

 Score = 72.8 bits (177), Expect = 3e-13
 Identities = 35/64 (54%), Positives = 43/64 (67%)
 Frame = +2

Query: 218 IIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRVFGAD 397
           +IPAR  S+R  GKPL LI GKPM+Q  WE+    S    VV+ATDD  I E C+ FGA+
Sbjct: 8   VIPARLRSTRLPGKPLLLIAGKPMVQHVWEQAR-KSGASRVVIATDDTSILEACQAFGAE 66

Query: 398 VVMT 409
           V+MT
Sbjct: 67  VMMT 70
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>KDSB_PSEAE (Q9HZM5) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 254

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 35/64 (54%), Positives = 45/64 (70%)
 Frame = +2

Query: 218 IIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRVFGAD 397
           +IPARYAS+R  GKPL  I G+PMIQR W +    S+   VVVATDDE+I   C+ FGA+
Sbjct: 8   VIPARYASTRLPGKPLQDIAGQPMIQRVWNQAR-KSAASRVVVATDDERILAACQGFGAE 66

Query: 398 VVMT 409
            ++T
Sbjct: 67  ALLT 70
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>KDSB_PASMU (P57883) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 258

 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 39/69 (56%), Positives = 47/69 (68%)
 Frame = +2

Query: 218 IIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRVFGAD 397
           IIPARYAS+R  GKPLA I GKPMI   +E+ M  S    V+VATD E++A   R FGA+
Sbjct: 7   IIPARYASTRLPGKPLAEIAGKPMIAHVFEKAM-QSGAKRVIVATDHEQVATVARGFGAE 65

Query: 398 VVMTSVSCQ 424
           V MTS + Q
Sbjct: 66  VCMTSETHQ 74
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>KPSU1_ECOLI (P42215) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
           (Fragment)
          Length = 71

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 34/69 (49%), Positives = 46/69 (66%)
 Frame = +2

Query: 203 SLAVGIIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCR 382
           S AV +IPARY SSR  GKPL  I+GKPMIQ  +ER +  + +  V VATDD+++ +  +
Sbjct: 1   SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDQRVEKAVQ 60

Query: 383 VFGADVVMT 409
            FG   +MT
Sbjct: 61  AFGGKAIMT 69
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>KDSB_VIBVY (Q7MJ10) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 251

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 34/65 (52%), Positives = 47/65 (72%)
 Frame = +2

Query: 218 IIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRVFGAD 397
           +IPARY S+R  GKPLA I GKPM+Q  +E+ + A + D V++ATDD+++A+   VFG  
Sbjct: 6   VIPARYQSTRLPGKPLADIAGKPMVQWVYEQAIQAGAQD-VIIATDDQRVADAVAVFGGK 64

Query: 398 VVMTS 412
           V MTS
Sbjct: 65  VCMTS 69
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>KDSB_VIBVU (Q8DAU9) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 251

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 34/65 (52%), Positives = 47/65 (72%)
 Frame = +2

Query: 218 IIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRVFGAD 397
           +IPARY S+R  GKPLA I GKPM+Q  +E+ + A + D V++ATDD+++A+   VFG  
Sbjct: 6   VIPARYQSTRLPGKPLADIAGKPMVQWVYEQAIQAGAQD-VIIATDDQRVADAVAVFGGK 64

Query: 398 VVMTS 412
           V MTS
Sbjct: 65  VCMTS 69
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>KPSU5_ECOLI (P42216) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 245

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 34/69 (49%), Positives = 45/69 (65%)
 Frame = +2

Query: 203 SLAVGIIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCR 382
           S AV +IPARY SSR  GKPL  I+GKPMIQ  +ER +  + +  V VATDD ++ +  +
Sbjct: 1   SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEQAVQ 60

Query: 383 VFGADVVMT 409
            FG   +MT
Sbjct: 61  AFGGKAIMT 69
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>KDSB_VIBCH (Q9KQX2) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 252

 Score = 69.3 bits (168), Expect = 4e-12
 Identities = 36/69 (52%), Positives = 48/69 (69%)
 Frame = +2

Query: 218 IIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRVFGAD 397
           +IPARY S+R  GKPLA I GKPMIQ  +E+ M A + D V++ATDDE++ +  + FG  
Sbjct: 6   VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDERVEQAVQAFGGV 64

Query: 398 VVMTSVSCQ 424
           V MTS + Q
Sbjct: 65  VCMTSPNHQ 73
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>KDSB_VIBPA (Q87R14) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 251

 Score = 69.3 bits (168), Expect = 4e-12
 Identities = 35/65 (53%), Positives = 46/65 (70%)
 Frame = +2

Query: 218 IIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRVFGAD 397
           +IPARY+SSR  GKPLA I GKPM+Q  +E+ M A + D V++ATDDE+++     FG  
Sbjct: 6   VIPARYSSSRLPGKPLADIGGKPMVQWVYEQAMQAGA-DDVIIATDDERVSAAVEQFGGK 64

Query: 398 VVMTS 412
           V MTS
Sbjct: 65  VCMTS 69
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>KDSB_HAEDU (Q7VNY6) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 253

 Score = 65.1 bits (157), Expect = 7e-11
 Identities = 34/65 (52%), Positives = 43/65 (66%)
 Frame = +2

Query: 218 IIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRVFGAD 397
           IIPARYASSR  GKPL  I G PMIQ  W++   A + + V++ATD  +I    + FGA+
Sbjct: 6   IIPARYASSRLPGKPLLDINGYPMIQYVWQKAQQAGA-NRVIIATDHPQIQTVAKAFGAE 64

Query: 398 VVMTS 412
           V MTS
Sbjct: 65  VCMTS 69
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>KDSB_FUSNN (Q8RFA8) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 245

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 34/67 (50%), Positives = 46/67 (68%)
 Frame = +2

Query: 212 VGIIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRVFG 391
           +GIIPARY+S+R EGKPL +I G  MI+  ++R    S+LD ++VATDDE+I      FG
Sbjct: 4   LGIIPARYSSTRLEGKPLKMIEGHTMIEWVYKRAK-KSNLDSLIVATDDERIYNEVINFG 62

Query: 392 ADVVMTS 412
              +MTS
Sbjct: 63  GQAIMTS 69
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>KDSB_YERPE (Q8ZGA4) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 250

 Score = 63.5 bits (153), Expect = 2e-10
 Identities = 34/71 (47%), Positives = 42/71 (59%)
 Frame = +2

Query: 212 VGIIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRVFG 391
           + IIPARYAS+R  GKPLA I GKPM+    ER  LAS  D V+VATD   + +     G
Sbjct: 4   IAIIPARYASTRLPGKPLADIAGKPMVVHVMERA-LASGADRVIVATDHPDVVKAVEAAG 62

Query: 392 ADVVMTSVSCQ 424
            +V +T    Q
Sbjct: 63  GEVCLTRADHQ 73
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>KDSB_ECOL6 (Q8FJA9) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 247

 Score = 60.8 bits (146), Expect = 1e-09
 Identities = 35/71 (49%), Positives = 41/71 (57%)
 Frame = +2

Query: 212 VGIIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRVFG 391
           V IIPARYAS+R  GKPL  I GKPMI    ER    S  + ++VATD E +A    V G
Sbjct: 3   VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEVAG 61

Query: 392 ADVVMTSVSCQ 424
            +V MT    Q
Sbjct: 62  GEVCMTRADHQ 72
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>KDSB_ECOLI (P04951) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 247

 Score = 59.3 bits (142), Expect = 4e-09
 Identities = 34/71 (47%), Positives = 40/71 (56%)
 Frame = +2

Query: 212 VGIIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRVFG 391
           V IIPARYAS+R  GKPL  I GKPMI    ER    S  + ++VATD E +A      G
Sbjct: 3   VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 61

Query: 392 ADVVMTSVSCQ 424
            +V MT    Q
Sbjct: 62  GEVCMTRADHQ 72
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>KDSB_ECO57 (Q8XDG6) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 247

 Score = 59.3 bits (142), Expect = 4e-09
 Identities = 34/71 (47%), Positives = 40/71 (56%)
 Frame = +2

Query: 212 VGIIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRVFG 391
           V IIPARYAS+R  GKPL  I GKPMI    ER    S  + ++VATD E +A      G
Sbjct: 3   VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 61

Query: 392 ADVVMTSVSCQ 424
            +V MT    Q
Sbjct: 62  GEVCMTRADHQ 72
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>KDSB_SALTY (Q8ZQC0) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 247

 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 32/71 (45%), Positives = 40/71 (56%)
 Frame = +2

Query: 212 VGIIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRVFG 391
           V IIPAR++S+R  GKPL  I GKPMI    ER    S  + ++VATD E +A      G
Sbjct: 3   VVIIPARFSSTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 61

Query: 392 ADVVMTSVSCQ 424
            +V MT    Q
Sbjct: 62  GEVCMTRADHQ 72
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>KDSB_SALTI (Q8Z800) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 247

 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 32/71 (45%), Positives = 40/71 (56%)
 Frame = +2

Query: 212 VGIIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRVFG 391
           V IIPAR++S+R  GKPL  I GKPMI    ER    S  + ++VATD E +A      G
Sbjct: 3   VVIIPARFSSTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAG 61

Query: 392 ADVVMTSVSCQ 424
            +V MT    Q
Sbjct: 62  GEVCMTRADHQ 72
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>KDSB_HELPY (O25016) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 243

 Score = 52.0 bits (123), Expect = 6e-07
 Identities = 31/65 (47%), Positives = 38/65 (58%)
 Frame = +2

Query: 218 IIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRVFGAD 397
           IIPAR  SSRFE K L  I G PM+ R  +    A+ +D  VVA DDE I + C+ F   
Sbjct: 3   IIPARLKSSRFENKVLEDIFGLPMVVRCAKN---ANLVDECVVACDDESIMQTCQKFHIK 59

Query: 398 VVMTS 412
            V+TS
Sbjct: 60  AVLTS 64
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>KDSB_HELPJ (Q9ZMK4) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 243

 Score = 52.0 bits (123), Expect = 6e-07
 Identities = 31/65 (47%), Positives = 38/65 (58%)
 Frame = +2

Query: 218 IIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRVFGAD 397
           IIPAR  SSRFE K L  I G PM+ R  +    A+ +D  VVA DDE I + C+ F   
Sbjct: 3   IIPARLKSSRFENKMLEDIFGLPMVVRCAKN---ANLVDECVVACDDESIMKACQKFHIK 59

Query: 398 VVMTS 412
            V+TS
Sbjct: 60  AVLTS 64
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>KDSB_RICCN (Q92I96) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 246

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 27/64 (42%), Positives = 39/64 (60%)
 Frame = +2

Query: 218 IIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRVFGAD 397
           IIP+R +S+R + KPL LI    +I+R +++V  A  L+H  VATD E+IA      G  
Sbjct: 9   IIPSRLSSTRLKQKPLQLIGSITLIERVFKQVNQA-GLEHTYVATDSEEIASVITKVGGK 67

Query: 398 VVMT 409
           V+ T
Sbjct: 68  VIFT 71
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>KDSB_AQUAE (O66914) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 234

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
 Frame = +2

Query: 218 IIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAE----CCRV 385
           IIPAR  S+R + KPL  +LGKP+I+  W    L  + + V++ATD E++ E     C V
Sbjct: 6   IIPARLGSTRLKEKPLKNLLGKPLIR--WVVEGLVKTGERVILATDSERVKEVVEDLCEV 63

Query: 386 F 388
           F
Sbjct: 64  F 64
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>NEUA_ECOLI (P13266) N-acylneuraminate cytidylyltransferase (EC 2.7.7.43)|
           (CMP-N-acetylneuraminic acid synthetase) (CMP-NeuNAc
           synthetase)
          Length = 419

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = +2

Query: 200 RSLAVGIIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECC 379
           R+  + IIPAR  S     K   +++ KP++  T E  + +   + V+V TD E+     
Sbjct: 2   RTKIIAIIPARSGSKGLRNKNALMLIDKPLLAYTIEAALQSEMFEKVIVTTDSEQYGAIA 61

Query: 380 RVFGADVVM 406
             +GAD ++
Sbjct: 62  ESYGADFLL 70
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>KDSB_RICPR (Q9ZDF0) 3-deoxy-manno-octulosonate cytidylyltransferase (EC|
           2.7.7.38) (CMP-KDO synthetase)
           (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS)
          Length = 246

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 25/64 (39%), Positives = 37/64 (57%)
 Frame = +2

Query: 218 IIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRVFGAD 397
           IIP+R  S+R   KPL LI    +I+R +++V  A ++ H  VATD E+IA   +     
Sbjct: 9   IIPSRLNSTRLIQKPLQLIGSITLIERVFQQVNKA-NIHHTYVATDSEEIANVIKKISGK 67

Query: 398 VVMT 409
           V+ T
Sbjct: 68  VIFT 71
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>NEUA_STRA3 (P0A4V0) N-acylneuraminate cytidylyltransferase (EC 2.7.7.43)|
           (CMP-N-acetylneuraminic acid synthetase) (CMP-NeuNAc
           synthetase) (CMP-sialic acid synthetase)
          Length = 413

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
 Frame = +2

Query: 218 IIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLD--HVVVATDDEKIAECCRVFG 391
           IIPAR  S     K +  + GKPMI  T +  + +   D   + V+TD E   E C   G
Sbjct: 6   IIPARSGSKGLPDKNMLFLAGKPMIFHTIDAAIESGMFDKKDIFVSTDSELYREICLERG 65

Query: 392 ADVVMTSVSCQMD 430
             VVM       D
Sbjct: 66  ISVVMRKPELSTD 78
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>NEUA_STRA1 (P0A4V1) N-acylneuraminate cytidylyltransferase (EC 2.7.7.43)|
           (CMP-N-acetylneuraminic acid synthetase) (CMP-NeuNAc
           synthetase) (CMP-sialic acid synthetase)
          Length = 413

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
 Frame = +2

Query: 218 IIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLD--HVVVATDDEKIAECCRVFG 391
           IIPAR  S     K +  + GKPMI  T +  + +   D   + V+TD E   E C   G
Sbjct: 6   IIPARSGSKGLPDKNMLFLAGKPMIFHTIDAAIESGMFDKKDIFVSTDSELYREICLERG 65

Query: 392 ADVVMTSVSCQMD 430
             VVM       D
Sbjct: 66  ISVVMRKPELSTD 78
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>NEUA_STRA5 (Q9AFG9) N-acylneuraminate cytidylyltransferase (EC 2.7.7.43)|
           (CMP-N-acetylneuraminic acid synthetase) (CMP-NeuNAc
           synthetase) (CMP-sialic acid synthetase)
          Length = 413

 Score = 38.1 bits (87), Expect = 0.009
 Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
 Frame = +2

Query: 218 IIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLD--HVVVATDDEKIAECCRVFG 391
           IIPAR  S     K +  + GKPMI  T +  + +   D   + V+TD E   E C   G
Sbjct: 6   IIPARSGSKGLPDKNMLFLSGKPMIFHTIDAAIESGMFDKKDIFVSTDSELYREICLERG 65

Query: 392 ADVVMTSVSCQMD 430
             VVM       D
Sbjct: 66  ISVVMRKPELSTD 78
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>NEUA_NEIME (P0A0Z8) N-acylneuraminate cytidylyltransferase (EC 2.7.7.43)|
           (CMP-N-acetylneuraminic acid synthetase) (CMP-NeuNAc
           synthetase) (CMP-sialic acid synthetase)
          Length = 228

 Score = 32.3 bits (72), Expect = 0.50
 Identities = 20/73 (27%), Positives = 33/73 (45%)
 Frame = +2

Query: 212 VGIIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRVFG 391
           + +I AR  S     K L  + G  ++  T    + +   D ++V+TD   IAE  + FG
Sbjct: 6   IAVILARQNSKGLPLKNLRKMNGISLLGHTINAAISSKCFDRIIVSTDGGLIAEEAKNFG 65

Query: 392 ADVVMTSVSCQMD 430
            +VV+       D
Sbjct: 66  VEVVLRPAELASD 78
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>NEUA_NEIMB (P0A0Z7) N-acylneuraminate cytidylyltransferase (EC 2.7.7.43)|
           (CMP-N-acetylneuraminic acid synthetase) (CMP-NeuNAc
           synthetase) (CMP-sialic acid synthetase)
          Length = 228

 Score = 32.3 bits (72), Expect = 0.50
 Identities = 20/73 (27%), Positives = 33/73 (45%)
 Frame = +2

Query: 212 VGIIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRVFG 391
           + +I AR  S     K L  + G  ++  T    + +   D ++V+TD   IAE  + FG
Sbjct: 6   IAVILARQNSKGLPLKNLRKMNGISLLGHTINAAISSKCFDRIIVSTDGGLIAEEAKNFG 65

Query: 392 ADVVMTSVSCQMD 430
            +VV+       D
Sbjct: 66  VEVVLRPAELASD 78
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>TILS_AGRT5 (Q8U9L7) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 443

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
 Frame = +2

Query: 194 GFRSLAVGIIPARYASSRFEGKPLALI---LGKPMIQRTWERVMLASSLDHVVVATDDEK 364
           G R  AV +  A    S  E + +A++   LG P   R W+    AS L           
Sbjct: 59  GLRLSAVTVDHALRPESADEARKVAMLCAELGIPHTTRRWDGPKPASGLSEASRLARYRL 118

Query: 365 IAECCRVFGADVVMT 409
           IA+  R  GAD+V++
Sbjct: 119 IADVAREIGADLVVS 133
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>KDPD_ECOLI (P21865) Sensor protein kdpD (EC 2.7.13.3)|
          Length = 894

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
 Frame = +2

Query: 230 RYASSRFEGKPLALILGKPMIQRTWER-------VMLASSLDHVVVATDD 358
           RYA     GK   +ILG+P  +R W R         +A  LD V+VA D+
Sbjct: 330 RYAREHNLGK---IILGRPASRRWWRRETFADRLARIAPDLDQVLVALDE 376
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>IXR1_YEAST (P33417) Intrastrand crosslink recognition protein|
           (Structure-specific recognition protein) (SSRP)
          Length = 597

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
 Frame = -2

Query: 401 QHQLQKLYNTQQFSHH----RSPQQHGLTKKLA 315
           QHQLQ+    QQ  HH    +  QQH + KKL+
Sbjct: 312 QHQLQQQQQLQQQHHHLQQQQQQQQHPVVKKLS 344
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>ISPD_MYCLE (Q9CCW6) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase|
           (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol
           synthase) (MEP cytidylyltransferase) (MCT)
          Length = 241

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = +2

Query: 212 VGIIPARYASSRFEG---KPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAE 373
           V ++PA  A  R      K    + G+ +++R    ++ +  +DHVVVA   ++IA+
Sbjct: 9   VAVVPAAGAGKRLAAGIPKAFCELDGRTLVERAVVGLLESGVVDHVVVAVPADRIAQ 65
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>HEM3_BRUSU (Q8FYI6) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)|
           (Hydroxymethylbilane synthase) (HMBS)
           (Pre-uroporphyrinogen synthase)
          Length = 314

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = +2

Query: 176 LYRRPRGFRSLAVGIIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATD 355
           L +   G    A+ I+P   A  R + +PL+ + GK +     E+ +    +D  V +T 
Sbjct: 31  LLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFTEEIEQALKDGRIDIAVHSTK 90

Query: 356 D 358
           D
Sbjct: 91  D 91
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>HEM3_BRUME (Q8YJB0) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)|
           (Hydroxymethylbilane synthase) (HMBS)
           (Pre-uroporphyrinogen synthase)
          Length = 314

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = +2

Query: 176 LYRRPRGFRSLAVGIIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATD 355
           L +   G    A+ I+P   A  R + +PL+ + GK +     E+ +    +D  V +T 
Sbjct: 31  LLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFTEEIEQALKDGRIDIAVHSTK 90

Query: 356 D 358
           D
Sbjct: 91  D 91
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>APOF_RAT (Q5M889) Apolipoprotein F precursor (Apo-F) (Liver|
           regeneration-related protein LRRG151)
          Length = 308

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -1

Query: 423 WHDTDVITTSAPKTLQHSAIFSSSVATTTWSN 328
           +HD + +TTS P+T + +  +   V  TT SN
Sbjct: 250 YHDEEGVTTSQPETRKDAPTYRDDVEETTMSN 281
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>PYRB_LACPL (P77883) Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate|
           transcarbamylase) (ATCase)
          Length = 311

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -2

Query: 419 MILMSLQHQLQKLYNTQQFSHHRSPQQHGLTKKLA*LFPRFSV 291
           M+L+ +QH+     N Q F      QQ+GLT + A   P+ ++
Sbjct: 212 MMLLRVQHERLSQVNNQTFDASAYHQQYGLTAERAARMPKHAI 254
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>NEUA_ONCMY (Q90WG6) N-acylneuraminate cytidylyltransferase (EC 2.7.7.43)|
           (CMP-N-acetylneuraminic acid synthetase) (CMP-NeuNAc
           synthetase)
          Length = 432

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 19/71 (26%), Positives = 31/71 (43%)
 Frame = +2

Query: 218 IIPARYASSRFEGKPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKIAECCRVFGAD 397
           +I AR  S     K + ++ G P+I       + +   D V V+TD + I +  + +GA 
Sbjct: 35  LILARGGSKGIPLKNIKVLAGVPLIGWVLRAAVDSKQFDSVWVSTDHDDIEKVAKTWGAQ 94

Query: 398 VVMTSVSCQMD 430
           V   S     D
Sbjct: 95  VHRRSPEVSKD 105
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>ZFHX2_HUMAN (Q9C0A1) Zinc finger homeobox protein 2|
          Length = 1427

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
 Frame = -1

Query: 276 RMRASG-LPSKREEA*RAGMMPTARLRNPRGRRYRXXXXXXXXXXXXXXPWKTHARPPEP 100
           R RA G  P + EE+ R  + P      P GRR+                ++T A P + 
Sbjct: 423 RSRAGGHWPIEEEESSRGNLPPLV----PAGRRFSRTKFTEFQTQALQSFFETSAYPKDG 478

Query: 99  EDSDGAGQIGIAT--AVAWIRRRR 34
           E    A  +G+A+   V W +  R
Sbjct: 479 EVERLASLLGLASRVVVVWFQNAR 502
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>ISPD_STAEQ (Q5HRJ7) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase|
           (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol
           synthase) (MEP cytidylyltransferase) (MCT)
          Length = 238

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 257 KPLALILGKPMIQRTWERVMLASSLDHVVVATDDEKI 367
           K   L+ GKP+I  T E+ ++    D +++AT  + I
Sbjct: 22  KQFLLLQGKPIIIHTVEKFLMYKDFDEIIIATPQKWI 58
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>SOCS4_MOUSE (Q91ZA6) Suppressor of cytokine signaling 4 (SOCS-4) (Suppressor of|
           cytokine signaling 7) (SOCS-7)
          Length = 436

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 17  HSPGSLRRRRIHATAVAMPICPAPSES 97
           HSPG   +R+IH + + +  CP P  S
Sbjct: 109 HSPGLPSKRKIHISELMLDKCPFPPRS 135


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,516,656
Number of Sequences: 219361
Number of extensions: 762446
Number of successful extensions: 2721
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 2660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2703
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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