ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast13g02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL672232.23| Mouse DNA sequence from clone RP23-367M14 on ch... 46 0.040
2ref|NM_104384.3| Arabidopsis thaliana nucleic acid binding / tra... 42 0.63
3gb|AY150421.1| Arabidopsis thaliana putative zinc finger protein... 42 0.63
4gb|AY090998.1| Arabidopsis thaliana putative zinc finger protein... 42 0.63
5gb|AC073944.6|AC073944 Arabidopsis thaliana chromosome 1 BAC T7N... 42 0.63
6dbj|AP001582.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 0.63
7gb|AC149347.2| Phakopsora pachyrhizi clone JGIAFNA-33E15, comple... 40 2.5
8gb|AC137110.11| Mus musculus chromosome 7, clone RP23-399P8, com... 40 2.5
9gb|AC158215.3| Mus musculus chromosome 7, clone RP24-180E12, com... 40 2.5
10gb|AC115940.11| Mus musculus chromosome 5, clone RP24-553D12, co... 40 2.5
11gb|AC127275.4| Mus musculus BAC clone RP24-207I8 from chromosome... 40 2.5
12gb|AC007035.3| Homo sapiens BAC clone RP11-104I19 from 7, comple... 40 2.5
13emb|AL159171.15| Human DNA sequence from clone RP11-280G19 on ch... 40 2.5
14emb|AL021453.1|HS821D11 Human DNA sequence from clone RP5-821D11... 40 2.5
15dbj|AK124515.1| Homo sapiens cDNA FLJ42524 fis, clone BRACE3001384 40 2.5
16gb|AY830526.1| Threnetes leucurus NADH dehydrogenase subunit 2 (... 40 2.5
17ref|NM_114999.2| Arabidopsis thaliana unknown protein AT3G51400 ... 38 9.8
18gb|AC149156.3| Xenopus tropicalis clone ISB-258L19, complete seq... 38 9.8
19gb|AC105324.11| Mus musculus chromosome 15, clone RP24-311E18, c... 38 9.8
20gb|AC108813.8| Mus musculus chromosome 1, clone RP23-320P13, com... 38 9.8
21gb|AC147171.3| Xenopus tropicalis clone CH216-162P3, complete se... 38 9.8
22gb|AC132371.2| Mus musculus BAC clone RP23-477D20 from chromosom... 38 9.8
23gb|AC146001.2| Pan troglodytes BAC clone RP43-148A6 from 7, comp... 38 9.8
24gb|AC124375.5| Mus musculus BAC clone RP24-572I2 from chromosome... 38 9.8
25gb|AC004926.2| Homo sapiens PAC clone RP5-910H9 from 7, complete... 38 9.8
26gb|AC007164.3| Homo sapiens BAC clone RP11-304A10 from 7, comple... 38 9.8
27gb|AC137644.3| Artibeus jamaicensis clone 25B10, complete sequence 38 9.8
28gb|AC157785.2| Mus musculus chromosome 19, clone RP24-272L14, co... 38 9.8
29emb|BX571657.1| Wolinella succinogenes, complete genome; segment... 38 9.8
30emb|AL133452.1|ATF26O13 Arabidopsis thaliana DNA chromosome 3, B... 38 9.8
31gb|AC087878.7| Homo sapiens chromosome 15, clone RP11-62C7, comp... 38 9.8
32gb|AC113146.2| Homo sapiens chromosome 15, clone RP11-265N7, com... 38 9.8
33dbj|AK132902.1| Mus musculus adult male testis cDNA, RIKEN full-... 38 9.8
34gb|AC021523.8| Homo sapiens chromosome 8, clone RP11-336N16, com... 38 9.8
35gb|AC008665.6| Homo sapiens chromosome 5 clone CTB-34L8, complet... 38 9.8
36gb|DP000001.1| Artibeus jamaicensis target 1 genomic scaffold 38 9.8
37gb|AC026742.3| Homo sapiens chromosome 5 clone CTD-3103E19, comp... 38 9.8
38gb|AC010218.7|AC010218 Homo sapiens chromosome 5 clone CTC-214C1... 38 9.8
39gb|AC099699.16| Mus musculus chromosome 7, clone RP23-32A8, comp... 38 9.8
40gb|AC079612.6| Homo sapiens BAC clone RP11-314A6 from 2, complet... 38 9.8
41gb|AC093633.3| Homo sapiens BAC clone RP11-157M22 from 2, comple... 38 9.8
42gb|AY085362.1| Arabidopsis thaliana clone 14797 mRNA, complete s... 38 9.8
43emb|AL974313.6| Zebrafish DNA sequence from clone CH211-281M5, c... 38 9.8
44emb|CR956419.6| Pig DNA sequence from clone CH242-148M18 on chro... 38 9.8
45dbj|AP004950.1| Lotus japonicus genomic DNA, chromosome 1, clone... 38 9.8
46emb|AL840626.7| Mouse DNA sequence from clone RP23-151M8 on chro... 38 9.8 
>emb|AL672232.23| Mouse DNA sequence from clone RP23-367M14 on chromosome X, complete
              sequence
          Length = 202689

 Score = 46.1 bits (23), Expect = 0.040
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 167    tcccccacatcttcctccccttc 189
              |||||||||||||||||||||||
Sbjct: 120747 tcccccacatcttcctccccttc 120769
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>ref|NM_104384.3| Arabidopsis thaliana nucleic acid binding / transcription factor/
           zinc ion binding AT1G55110 mRNA, complete cds
          Length = 1580

 Score = 42.1 bits (21), Expect = 0.63
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 72  tttctcttcctcatctcaaaacatcatca 100
           ||||||||| ||||| |||||||||||||
Sbjct: 846 tttctcttcgtcatcccaaaacatcatca 874
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>gb|AY150421.1| Arabidopsis thaliana putative zinc finger protein (At1g55110) mRNA,
           complete cds
          Length = 1399

 Score = 42.1 bits (21), Expect = 0.63
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 72  tttctcttcctcatctcaaaacatcatca 100
           ||||||||| ||||| |||||||||||||
Sbjct: 756 tttctcttcgtcatcccaaaacatcatca 784
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>gb|AY090998.1| Arabidopsis thaliana putative zinc finger protein (At1g55110) mRNA,
           complete cds
          Length = 1596

 Score = 42.1 bits (21), Expect = 0.63
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 72  tttctcttcctcatctcaaaacatcatca 100
           ||||||||| ||||| |||||||||||||
Sbjct: 846 tttctcttcgtcatcccaaaacatcatca 874
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>gb|AC073944.6|AC073944 Arabidopsis thaliana chromosome 1 BAC T7N22 genomic sequence, complete
             sequence
          Length = 44540

 Score = 42.1 bits (21), Expect = 0.63
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 72    tttctcttcctcatctcaaaacatcatca 100
             ||||||||| ||||| |||||||||||||
Sbjct: 20956 tttctcttcgtcatcccaaaacatcatca 20928
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>dbj|AP001582.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-215H18, complete
             sequence
          Length = 90256

 Score = 42.1 bits (21), Expect = 0.63
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 68    tccatttctcttcctcatctc 88
             |||||||||||||||||||||
Sbjct: 16412 tccatttctcttcctcatctc 16432
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>gb|AC149347.2| Phakopsora pachyrhizi clone JGIAFNA-33E15, complete sequence
          Length = 44825

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    ccatttctcttcctcatctc 88
             ||||||||||||||||||||
Sbjct: 38945 ccatttctcttcctcatctc 38964



 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    ccatttctcttcctcatctc 88
             ||||||||||||||||||||
Sbjct: 37405 ccatttctcttcctcatctc 37424
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>gb|AC137110.11| Mus musculus chromosome 7, clone RP23-399P8, complete sequence
          Length = 199827

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   cccacatcttcctccccttc 189
             ||||||||||||||||||||
Sbjct: 81605 cccacatcttcctccccttc 81624
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>gb|AC158215.3| Mus musculus chromosome 7, clone RP24-180E12, complete sequence
          Length = 156342

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    cccacatcttcctccccttc 189
              ||||||||||||||||||||
Sbjct: 129918 cccacatcttcctccccttc 129937
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>gb|AC115940.11| Mus musculus chromosome 5, clone RP24-553D12, complete sequence
          Length = 189685

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 96    catcatcctaggcacaagcacaaa 119
             |||||||||||| |||||||||||
Sbjct: 36283 catcatcctaggtacaagcacaaa 36260
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>gb|AC127275.4| Mus musculus BAC clone RP24-207I8 from chromosome 5, complete sequence
          Length = 180919

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 96     catcatcctaggcacaagcacaaa 119
              |||||||||||| |||||||||||
Sbjct: 111217 catcatcctaggtacaagcacaaa 111194
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>gb|AC007035.3| Homo sapiens BAC clone RP11-104I19 from 7, complete sequence
          Length = 180397

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    atacctgcccatccatttct 76
             ||||||||||||||||||||
Sbjct: 64684 atacctgcccatccatttct 64665
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>emb|AL159171.15| Human DNA sequence from clone RP11-280G19 on chromosome 10 Contains a
             novel pseudogene (HSPC031) and a thyroid autoantigen 70kDa
             (Ku antigen)(G22P1) pseudogene, complete sequence
          Length = 168145

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    catctcaaaacatcatcatc 102
             ||||||||||||||||||||
Sbjct: 20861 catctcaaaacatcatcatc 20842
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>emb|AL021453.1|HS821D11 Human DNA sequence from clone RP5-821D11 on chromosome 22q12.3-13.1,
             complete sequence
          Length = 76727

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   cccacatcttcctccccttc 189
             ||||||||||||||||||||
Sbjct: 49063 cccacatcttcctccccttc 49082
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>dbj|AK124515.1| Homo sapiens cDNA FLJ42524 fis, clone BRACE3001384
          Length = 4587

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 170  cccacatcttcctccccttc 189
            ||||||||||||||||||||
Sbjct: 1626 cccacatcttcctccccttc 1645
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>gb|AY830526.1| Threnetes leucurus NADH dehydrogenase subunit 2 (ND2) gene,
           complete cds; mitochondrial
          Length = 1040

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 80  cctcatctcaaaacatcatcatcc 103
           |||||||||||||||||| |||||
Sbjct: 126 cctcatctcaaaacatcaccatcc 149
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>ref|NM_114999.2| Arabidopsis thaliana unknown protein AT3G51400 mRNA, complete cds
          Length = 1106

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 84  atctcaaaacatcatcatc 102
           |||||||||||||||||||
Sbjct: 17  atctcaaaacatcatcatc 35
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>gb|AC149156.3| Xenopus tropicalis clone ISB-258L19, complete sequence
          Length = 70067

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 60    cctgcccatccatttctcttcct 82
             |||||||||||||||| ||||||
Sbjct: 69184 cctgcccatccatttcacttcct 69162
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>gb|AC105324.11| Mus musculus chromosome 15, clone RP24-311E18, complete sequence
          Length = 171004

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 167    tcccccacatcttcctccccttc 189
              ||||||| |||||||||||||||
Sbjct: 114941 tcccccatatcttcctccccttc 114919
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>gb|AC108813.8| Mus musculus chromosome 1, clone RP23-320P13, complete sequence
          Length = 198759

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 153    tgagcaatggcagctcccc 171
              |||||||||||||||||||
Sbjct: 143392 tgagcaatggcagctcccc 143374
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>gb|AC147171.3| Xenopus tropicalis clone CH216-162P3, complete sequence
          Length = 156475

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 60    cctgcccatccatttctcttcct 82
             |||||||||||||||| ||||||
Sbjct: 69373 cctgcccatccatttcacttcct 69351
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>gb|AC132371.2| Mus musculus BAC clone RP23-477D20 from chromosome 5, complete sequence
          Length = 193291

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 25    ggccatctcatcgaccaga 43
             |||||||||||||||||||
Sbjct: 51635 ggccatctcatcgaccaga 51653
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>gb|AC146001.2| Pan troglodytes BAC clone RP43-148A6 from 7, complete sequence
          Length = 154218

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 70     catttctcttcctcatctc 88
              |||||||||||||||||||
Sbjct: 124381 catttctcttcctcatctc 124399
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>gb|AC124375.5| Mus musculus BAC clone RP24-572I2 from chromosome 1, complete sequence
          Length = 160443

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 153   tgagcaatggcagctcccc 171
             |||||||||||||||||||
Sbjct: 35601 tgagcaatggcagctcccc 35583
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>gb|AC004926.2| Homo sapiens PAC clone RP5-910H9 from 7, complete sequence
          Length = 153556

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 71    atttctcttcctcatctca 89
             |||||||||||||||||||
Sbjct: 99282 atttctcttcctcatctca 99264
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>gb|AC007164.3| Homo sapiens BAC clone RP11-304A10 from 7, complete sequence
          Length = 89862

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 70    catttctcttcctcatctc 88
             |||||||||||||||||||
Sbjct: 23427 catttctcttcctcatctc 23409
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>gb|AC137644.3| Artibeus jamaicensis clone 25B10, complete sequence
          Length = 120831

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 65     ccatccatttctcttcctc 83
              |||||||||||||||||||
Sbjct: 100910 ccatccatttctcttcctc 100928
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>gb|AC157785.2| Mus musculus chromosome 19, clone RP24-272L14, complete sequence
          Length = 159030

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 66    catccatttctcttcctca 84
             |||||||||||||||||||
Sbjct: 56289 catccatttctcttcctca 56307
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>emb|BX571657.1| Wolinella succinogenes, complete genome; segment 1/7
          Length = 347961

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 161    ggcagctcccccacatctt 179
              |||||||||||||||||||
Sbjct: 347867 ggcagctcccccacatctt 347849
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>emb|AL133452.1|ATF26O13 Arabidopsis thaliana DNA chromosome 3, BAC clone F26O13
          Length = 94349

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 84    atctcaaaacatcatcatc 102
             |||||||||||||||||||
Sbjct: 24660 atctcaaaacatcatcatc 24642
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>gb|AC087878.7| Homo sapiens chromosome 15, clone RP11-62C7, complete sequence
          Length = 166485

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 64   cccatccatttctcttcct 82
            |||||||||||||||||||
Sbjct: 5142 cccatccatttctcttcct 5124
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>gb|AC113146.2| Homo sapiens chromosome 15, clone RP11-265N7, complete sequence
          Length = 178395

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 64    cccatccatttctcttcct 82
             |||||||||||||||||||
Sbjct: 48018 cccatccatttctcttcct 48036
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>dbj|AK132902.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930505M21 product:unclassifiable, full
           insert sequence
          Length = 1161

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 25  ggccatctcatcgaccaga 43
           |||||||||||||||||||
Sbjct: 881 ggccatctcatcgaccaga 899
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>gb|AC021523.8| Homo sapiens chromosome 8, clone RP11-336N16, complete sequence
          Length = 170299

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 68     tccatttctcttcctcatctcaaaaca 94
              ||||||||  |||||||||||||||||
Sbjct: 120382 tccatttcatttcctcatctcaaaaca 120356
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>gb|AC008665.6| Homo sapiens chromosome 5 clone CTB-34L8, complete sequence
          Length = 133329

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 84    atctcaaaacatcatcatc 102
             |||||||||||||||||||
Sbjct: 56369 atctcaaaacatcatcatc 56387
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>gb|DP000001.1| Artibeus jamaicensis target 1 genomic scaffold
          Length = 584809

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 65     ccatccatttctcttcctc 83
              |||||||||||||||||||
Sbjct: 100910 ccatccatttctcttcctc 100928
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>gb|AC026742.3| Homo sapiens chromosome 5 clone CTD-3103E19, complete sequence
          Length = 149710

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 68     tccatttctcttcctcatc 86
              |||||||||||||||||||
Sbjct: 116924 tccatttctcttcctcatc 116942
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>gb|AC010218.7|AC010218 Homo sapiens chromosome 5 clone CTC-214C18, complete sequence
          Length = 97391

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 84    atctcaaaacatcatcatc 102
             |||||||||||||||||||
Sbjct: 86206 atctcaaaacatcatcatc 86224
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>gb|AC099699.16| Mus musculus chromosome 7, clone RP23-32A8, complete sequence
          Length = 195263

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 85    tctcaaaacatcatcatcc 103
             |||||||||||||||||||
Sbjct: 45157 tctcaaaacatcatcatcc 45139
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>gb|AC079612.6| Homo sapiens BAC clone RP11-314A6 from 2, complete sequence
          Length = 118368

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 161   ggcagctcccccacatcttcctc 183
             |||| ||||||||||||||||||
Sbjct: 35485 ggcatctcccccacatcttcctc 35463
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>gb|AC093633.3| Homo sapiens BAC clone RP11-157M22 from 2, complete sequence
          Length = 173066

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 68     tccatttctcttcctcatc 86
              |||||||||||||||||||
Sbjct: 126883 tccatttctcttcctcatc 126901
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>gb|AY085362.1| Arabidopsis thaliana clone 14797 mRNA, complete sequence
          Length = 939

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 84  atctcaaaacatcatcatc 102
           |||||||||||||||||||
Sbjct: 18  atctcaaaacatcatcatc 36
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>emb|AL974313.6| Zebrafish DNA sequence from clone CH211-281M5, complete sequence
          Length = 185165

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 65    ccatccatttctcttcctc 83
             |||||||||||||||||||
Sbjct: 30249 ccatccatttctcttcctc 30267
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>emb|CR956419.6| Pig DNA sequence from clone CH242-148M18 on chromosome 17, complete
             sequence
          Length = 90759

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 68    tccatttctcttcctcatc 86
             |||||||||||||||||||
Sbjct: 69538 tccatttctcttcctcatc 69556
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>dbj|AP004950.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT42E10, TM0123,
             complete sequence
          Length = 79601

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 95    tcatcatcctaggcacaag 113
             |||||||||||||||||||
Sbjct: 76616 tcatcatcctaggcacaag 76634
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>emb|AL840626.7| Mouse DNA sequence from clone RP23-151M8 on chromosome 2, complete
             sequence
          Length = 181014

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 166   ctcccccacatcttcctcccctt 188
             ||||||||||||| |||||||||
Sbjct: 28685 ctcccccacatctacctcccctt 28663


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,708,121
Number of Sequences: 3902068
Number of extensions: 1708121
Number of successful extensions: 130998
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 130910
Number of HSP's gapped (non-prelim): 88
length of query: 198
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 176
effective length of database: 17,147,199,772
effective search space: 3017907159872
effective search space used: 3017907159872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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