>L2MU_ADE02 (P14269) Late L2 mu core protein precursor (pMu) (Protein X) (pX)|
           (11 kDa core protein)
          Length = 79

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +1

Query: 247 HHRQGRRGHAGLRARQQGHRPRRQALHRPVPPREAGAVQPGVRGRVGAVDGEA 405
           H R+G  GH      ++ H  RR+A HR +       + P +   +GAV G A
Sbjct: 18  HRRRGMAGHGLTGGMRRAHHRRRRASHRRMRGGILPLLIPLIAAAIGAVPGIA 70

>SRCH_RABIT (P16230) Sarcoplasmic reticulum histidine-rich calcium-binding|
           protein precursor
          Length = 852

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 23/66 (34%), Positives = 25/66 (37%), Gaps = 16/66 (24%)
 Frame = +1

Query: 229 QGHALQH---------HRQG------RRGHAGLRARQQGHRPRRQA-LHRPVPPREAGAV 360
           +GHA +H         HR G       RGH     RQQGH P      HR     E G  
Sbjct: 590 EGHAEEHQTEVPGHHQHRMGDTDTSAERGHPASSPRQQGHPPEDTVHHHRGSLKEEVGPE 649

Query: 361 QPGVRG 378
            PG  G
Sbjct: 650 SPGPAG 655

>GALT6_BOVIN (Q5EA41) Polypeptide N-acetylgalactosaminyltransferase 6 (EC|
           2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase
           6) (UDP-GalNAc:polypeptide
           N-acetylgalactosaminyltransferase 6) (Polypeptide GalNAc
           transferase 6) (GalNAc-T6) (pp-GaNTase 6)
          Length = 622

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 158 CLAVRDGEVVLAPVNPKDETQHWL 229
           CL  +D + V+A  NP D  QHWL
Sbjct: 597 CLTSKDKKPVMATCNPSDPHQHWL 620

>AFSK_STRGR (P54742) Serine/threonine protein kinase afsK (EC 2.7.11.1)|
          Length = 807

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +1

Query: 43  RSPRRQDVRVRAPPQGPGAG 102
           R PR +  R+RA PQGPGAG
Sbjct: 305 RPPRPRPRRLRAAPQGPGAG 324

>CUTI2_ASPOR (Q2TZY7) Probable cutinase 2 precursor (EC 3.1.1.74) (Cutin|
           hydrolase 2)
          Length = 221

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
 Frame = +2

Query: 35  IRHALLAAKMFGFGHHHKDQAPAASGPNQIFKIYCRASEDYCLAVRDGEVVLAPV----- 199
           ++  +    +FG+  + ++    A+ P    K+YC   +  C    DG +++ P      
Sbjct: 143 VKEKIKGVVLFGYTRNAQEHGQIANFPKDKVKVYCAVGDMVC----DGTLIVGPAHFTYL 198

Query: 200 -NPKDETQHWLKDMRF 244
            N  + TQ  L  +RF
Sbjct: 199 GNTGEATQFLLGYLRF 214

>YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'region of gyrA and|
           gyrB (ORF 3)
          Length = 437

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 22/58 (37%), Positives = 24/58 (41%)
 Frame = +1

Query: 232 GHALQHHRQGRRGHAGLRARQQGHRPRRQALHRPVPPREAGAVQPGVRGRVGAVDGEA 405
           GH   HH +GRRG    R R QG    R            GA  P VR R+    GEA
Sbjct: 230 GHGDGHHLEGRRG----RPRPQGREAGR------------GAHPPQVRARIYLAAGEA 271



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 22/49 (44%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = +1

Query: 244 QHHRQGRRGHAGLRARQQGHRPRRQALHRPVPPREAGAV---QPGVRGR 381
           Q H+  R  HA  R  Q G  PRRQ L     PR AG     QP  RGR
Sbjct: 134 QQHQHPRGRHASDRV-QDGAHPRRQRLRE--QPRHAGRPRRRQPPRRGR 179

>PLSX_DEIRA (Q46578) Fatty acid/phospholipid synthesis protein plsX|
          Length = 360

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 23/53 (43%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
 Frame = +1

Query: 241 LQHHRQGRRGHAGLRARQQGHRPRRQ---ALHRPVPPREAG-AVQPGVRGRVG 387
           L+     R   AGL   +Q  RPRRQ   A  RP P   AG A   GVRG  G
Sbjct: 298 LRREHLDRGAGAGLYRPRQRRRPRRQKRRAACRPRPRSAAGRAPGSGVRGAAG 350

>RIMB1_MOUSE (Q7TNF8) Peripheral-type benzodiazepine receptor-associated protein 1|
            (PRAX-1) (Peripheral benzodiazepine receptor-interacting
            protein) (PBR-IP) (RIM-binding protein 1) (RIM-BP1)
          Length = 1846

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 10/34 (29%)
 Frame = +1

Query: 316  QALHRPVPPREAGAV----------QPGVRGRVG 387
            QA  RPVPPRE G++          +PG RGR G
Sbjct: 1429 QASARPVPPRERGSLPVIEGTRVGQEPGGRGRPG 1462

>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2424

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 17/50 (34%), Positives = 20/50 (40%)
 Frame = +1

Query: 232  GHALQHHRQGRRGHAGLRARQQGHRPRRQALHRPVPPREAGAVQPGVRGR 381
            G      R+  RG    R + + HRP     H   P R  G V PGV  R
Sbjct: 2197 GDLPSREREQERG----RPKDRKHRPHHHHHHHHHPGRGPGRVSPGVSAR 2242

>YLS6_CAEEL (P34391) Putative cuticle collagen F09G8.6|
          Length = 278

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 9/50 (18%)
 Frame = +1

Query: 283 RARQQGHRPRRQALHRPVPPREAG-------AVQPGVRGRVGA--VDGEA 405
           RAR+Q   P  QAL +  PP   G       A +PGV G  GA  +DG A
Sbjct: 71  RARRQAALPDCQALAKNCPPGPPGPPGAPGAAGEPGVDGDAGAAGIDGVA 120

>GALT6_MOUSE (Q8C7U7) Polypeptide N-acetylgalactosaminyltransferase 6 (EC|
           2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase
           6) (UDP-GalNAc:polypeptide
           N-acetylgalactosaminyltransferase 6) (Polypeptide GalNAc
           transferase 6) (GalNAc-T6) (pp-GaNTase 6)
          Length = 622

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 158 CLAVRDGEVVLAPVNPKDETQHWL 229
           CL  +D +  +AP NP+D  Q WL
Sbjct: 597 CLTSQDKKPAMAPCNPRDPYQLWL 620

>AXN2_BRARE (P57095) Axin-2 (Axis inhibition protein 2)|
          Length = 812

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 188 LAPVNPKDETQHWLKDMRFSTTVKDEEGM 274
           LA + PKD  +  + D+R ST  +DE+G+
Sbjct: 37  LAMMRPKDPVKTIMADLRCSTARRDEDGL 65

>BAB2_DROME (Q9W0K4) Protein bric-a-brac 2|
          Length = 1067

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = -1

Query: 375 SYAGLNGTSFTGWDWPMECLTARPVALLTSAKAGMPSSSLTVVLKRMSLSQ 223
           +Y G  GT+  G+        A   A L    AG P SS+T  L+R  LSQ
Sbjct: 751 TYIG-GGTTTNGYHSAAAAKLAAQNAALAPPDAGSPLSSMTETLRRQILSQ 800

>BMP4_DAMDA (Q29607) Bone morphogenetic protein 4 precursor (BMP-4)|
          Length = 408

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = +1

Query: 229 QGHALQHHRQGRRG--HAGLRARQQGHRPRRQALH 327
           +GHAL  HR+ +R   H   RAR++    RR +L+
Sbjct: 280 RGHALTRHRRAKRSPKHHPQRARKKNKNCRRHSLY 314

>TRPG_HALVO (P33974) Anthranilate synthase component II (EC 4.1.3.27)|
           (Glutamine amido-transferase)
          Length = 204

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -1

Query: 405 CFSVHST-DASSYAGLNGTSFTGWDWPMECLTARPVALLTSAKAGMPSSSLTVV 247
           CF V +T D    A + G      D+P+EC+   P ++LT +  G+  + LT V
Sbjct: 147 CFDVSATTDHDGEALVMGVRHR--DYPIECVQFHPESVLTGSGHGVVRNFLTAV 198

>CUTI1_ASPOR (P52956) Cutinase 1 precursor (EC 3.1.1.74) (Cutin hydrolase 1)|
           (L1)
          Length = 213

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = +2

Query: 62  MFGFGHHHKDQAPAASGPNQIFKIYCRASEDYCLAVRDGEVVLAP 196
           +FG+  + +++   A+ P    K+YC   +  CL    G +++AP
Sbjct: 152 LFGYTRNAQERGQIANFPKDKVKVYCAVGDLVCL----GTLIVAP 192

>RL1_PHOLL (Q7N9A7) 50S ribosomal protein L1|
          Length = 233

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = -1

Query: 366 GLNGTSFTGWDWPMECLTARPVALLTSAKAGMPSSSLTVVLKRMSLS 226
           G+  T+    D+  + L     ALL + K G PSS+  + +K++SLS
Sbjct: 169 GIIHTTIGKVDFDADKLKENLEALLVALKKGKPSSAKGIYIKKVSLS 215

>GALT6_HUMAN (Q8NCL4) Polypeptide N-acetylgalactosaminyltransferase 6 (EC|
           2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase
           6) (UDP-GalNAc:polypeptide
           N-acetylgalactosaminyltransferase 6) (Polypeptide GalNAc
           transferase 6) (GalNAc-T6) (pp-GaNTase 6)
          Length = 622

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 158 CLAVRDGEVVLAPVNPKDETQHWL 229
           CL  +D +  +AP NP D  Q WL
Sbjct: 597 CLTSQDKKPAMAPCNPSDPHQLWL 620

>LACE_AGRRD (P29822) Lactose-binding protein precursor (LBP)|
          Length = 422

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -1

Query: 111 PDAAGAWSLWWCPNPNILAARRACLIG*TGW 19
           PD AG W+L   P  NI  A  A  +G + W
Sbjct: 275 PDQAGKWALTAIPKLNIEGATAASNLGGSSW 305

>HLX1_HUMAN (Q14774) Homeobox protein HLX1 (Homeobox protein HB24)|
          Length = 488

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 271 HAGLRARQQGHRPRRQALHRPVPPREAGAVQPGVRG 378
           H   + +QQ  +P++Q   +P PP  AGA+QP   G
Sbjct: 121 HHHPQQQQQQQQPQQQ---QPPPPPRAGALQPPASG 153

>ILR1_ARATH (P54968) IAA-amino acid hydrolase ILR1 precursor (EC 3.5.1.-)|
          Length = 442

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 1/92 (1%)
 Frame = +2

Query: 68  GFGHHHKDQAPAASGPNQIFKI-YCRASEDYCLAVRDGEVVLAPVNPKDETQHWLKDMRF 244
           G   H K  A A  G N           ED+    +  +  +  +  K+ET    K +  
Sbjct: 343 GLYEHGKKVAEAMIGKNNFHDFPVTMGGEDFSFFTQKTKAAIFVLGVKNETLGAGKPLHS 402

Query: 245 STTVKDEEGMPAFALVNKATGLAVKHSIGQSH 340
                DEE +P  A ++ A  ++     G SH
Sbjct: 403 PYFFVDEEALPVGAALHAAMAVSYLDEHGHSH 434

>SYV_YEAST (P07806) Valyl-tRNA synthetase, mitochondrial precursor (EC|
           6.1.1.9) (Valine--tRNA ligase) (ValRS)
          Length = 1104

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +2

Query: 146 SEDYCLAVRDGEVVLAPVNPKDETQHWLKDMR 241
           ++D    VRDG++ + P + + E  HWL +++
Sbjct: 532 AKDAIKVVRDGQITITPKSSEAEYFHWLGNIQ 563

>PHSA_PHAVU (P07219) Phaseolin, alpha-type precursor|
          Length = 436

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +2

Query: 140 RASEDYCLAVRDGEVVLAPVNPKDETQHWLKDMRFSTTVKDEEGMPA---FALVN 295
           +A  +  L VR G  +L  V P D  +++      +    D + +PA   F LVN
Sbjct: 93  QADAELLLVVRSGSAILVLVKPDDRREYFFLTQGDNPIFSDNQKIPAGTIFYLVN 147


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,973,759
Number of Sequences: 219361
Number of extensions: 844979
Number of successful extensions: 3619
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3617
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 1354661664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)