>ANT_ARATH (Q38914) Protein AINTEGUMENTA (Complementing a protein kinase C|
           mutant protein 1) (Protein Dragon) (Protein ovule
           mutant)
          Length = 555

 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 9/67 (13%)
 Frame = +1

Query: 106 GDVATGAYYSQLASMPLKSDGSLCIMEALRRTDQQDHH---GPKLEDFLG------AGQP 258
           G    G  YS ++ MPL+SDGSLC+MEAL R+   +HH    PK+EDF G      + + 
Sbjct: 72  GSNPNGGIYSHMSVMPLRSDGSLCLMEALNRSSHSNHHQDSSPKVEDFFGTHHNNTSHKE 131

Query: 259 AMALSLD 279
           AM LSLD
Sbjct: 132 AMDLSLD 138

>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)|
          Length = 5179

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 20/74 (27%), Positives = 27/74 (36%)
 Frame = +2

Query: 170  PSALWKLYGEPINKITTGRSWRTFLARVSRRWR*AWTTPPTSITTAAVAEPVGNTDRPTA 349
            PS      G P    TTG S     + V      AWT  PT ++T ++    G    P++
Sbjct: 4272 PSTTTSPPGTPTRGTTTGSSSAPTPSTVQTTTTSAWTPTPTPLSTPSIIRTTGLRPYPSS 4331

Query: 350  AASCSKLTTCTVGP 391
               C  L      P
Sbjct: 4332 VLICCVLNDTYYAP 4345

>MDC1_HUMAN (Q14676) Mediator of DNA damage checkpoint protein 1 (Nuclear factor|
            with BRCT domains 1)
          Length = 2089

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 21/77 (27%), Positives = 33/77 (42%)
 Frame = +2

Query: 143  PPCLSSQTAPSALWKLYGEPINKITTGRSWRTFLARVSRRWR*AWTTPPTSITTAAVAEP 322
            P     Q + S    +  EP +++T GR  R+ +            TP T + TA   +P
Sbjct: 1163 PTAPELQPSTSTDQPVTSEPTSQVTRGRKSRSSVK-----------TPETVVPTALELQP 1211

Query: 323  VGNTDRPTAAASCSKLT 373
              +TDRP  +   S+ T
Sbjct: 1212 STSTDRPVTSEPTSQAT 1228

>MDC1_PANTR (Q7YR40) Mediator of DNA damage checkpoint protein 1|
          Length = 2171

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 21/76 (27%), Positives = 33/76 (43%)
 Frame = +2

Query: 146  PCLSSQTAPSALWKLYGEPINKITTGRSWRTFLARVSRRWR*AWTTPPTSITTAAVAEPV 325
            PC S+    ++      EP +++T GR  R+ +            TP T + TA   +P 
Sbjct: 1170 PCTSTDQPVTS------EPTSQVTRGRKSRSSVK-----------TPETVVPTALELQPS 1212

Query: 326  GNTDRPTAAASCSKLT 373
             +TDRP  +   S  T
Sbjct: 1213 TSTDRPVTSEPTSHAT 1228

>MAUE_METME (Q50231) Methylamine utilization protein mauE|
          Length = 190

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 23/93 (24%), Positives = 39/93 (41%)
 Frame = -1

Query: 450 VHHGXGRRRVLVGCQHRCRRGPTVHVVSLLQEAAAVGLSVLPTGSATAAVVIEVGGVVQA 271
           V+ G GR  +  GC  R      + +  +L+  A  G+S+       AAV +E+ G+   
Sbjct: 95  VNVGRGRTHIDCGCVRRPTSMSRIGMFHVLRALALAGMSLY-----VAAVPLEISGISIE 149

Query: 270 QRHRRLTRAKKVLQLRPVVILLIGSP*SFHNAE 172
                L  A  +  +     L++G P + H  E
Sbjct: 150 SALTALASAVMLSLIYMAADLMVGFPATKHKLE 182

>CDT1_MOUSE (Q8R4E9) DNA replication factor Cdt1 (Double parked homolog) (DUP)|
           (Retroviral insertion site 2 protein)
          Length = 557

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 280 CPGSAPSPADPRQESPPA 227
           CP S P P+ P + SPPA
Sbjct: 75  CPSSLPEPSSPAEPSPPA 92


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,181,635
Number of Sequences: 219361
Number of extensions: 758465
Number of successful extensions: 3515
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3510
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)