ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast13a09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 115 8e-23
2gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare str... 115 8e-23
3gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare str... 115 8e-23
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 115 8e-23
5gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence 115 8e-23
6dbj|AK063645.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 8e-23
7gb|AY106116.1| Zea mays PCO091367 mRNA sequence 74 3e-10
8emb|CR722992.2|CNS0GKT2 Tetraodon nigroviridis full-length cDNA 48 0.015
9emb|CR722982.2|CNS0GKSS Tetraodon nigroviridis full-length cDNA 48 0.015
10emb|CR714375.2|CNS0GE5V Tetraodon nigroviridis full-length cDNA 48 0.015
11emb|CR713600.2|CNS0GDKC Tetraodon nigroviridis full-length cDNA 48 0.015
12emb|CR705446.2|CNS0G79U Tetraodon nigroviridis full-length cDNA 48 0.015
13emb|CR704705.2|CNS0G6P9 Tetraodon nigroviridis full-length cDNA 48 0.015
14emb|CR699498.2|CNS0G2OM Tetraodon nigroviridis full-length cDNA 48 0.015
15emb|CR689042.2|CNS0FUM6 Tetraodon nigroviridis full-length cDNA 48 0.015
16emb|CR685219.2|CNS0FRNZ Tetraodon nigroviridis full-length cDNA 48 0.015
17emb|CR679206.2|CNS0FN0Y Tetraodon nigroviridis full-length cDNA 48 0.015
18emb|CR668108.2|CNS0FEHE Tetraodon nigroviridis full-length cDNA 48 0.015
19emb|CR652978.2|CNS0F2T4 Tetraodon nigroviridis full-length cDNA 48 0.015
20emb|CR650750.2|CNS0F138 Tetraodon nigroviridis full-length cDNA 48 0.015
21emb|AJ634527.1| Homo sapiens partial SCFV gene for single chain ... 44 0.23
22ref|XM_518159.1| PREDICTED: Pan troglodytes similar to KIAA1194 ... 42 0.90
23ref|NM_015455.3| Homo sapiens CCR4-NOT transcription complex, su... 42 0.90
24emb|CR670276.1|CNS0FG5M Tetraodon nigroviridis full-length cDNA 42 0.90
25gb|AE012420.1| Xanthomonas campestris pv. campestris str. ATCC 3... 42 0.90
26gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 42 0.90
27gb|AC034213.5|AC034213 Homo sapiens chromosome 5 clone CTC-573N1... 42 0.90
28gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 42 0.90
29gb|AE017221.1| Thermus thermophilus HB27, complete genome 42 0.90
30dbj|AB033020.1| Homo sapiens mRNA for KIAA1194 protein, partial cds 42 0.90
31ref|XM_482291.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.6
32ref|XM_483613.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.6
33ref|XM_482106.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.6
34ref|XM_509433.1| PREDICTED: Pan troglodytes similar to SPPL3 pro... 40 3.6
35ref|XM_464692.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.6
36ref|XM_464691.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.6
37ref|NM_024835.2| Homo sapiens zinc finger protein 403 (ZNF403), ... 40 3.6
38ref|NM_185799.1| Oryza sativa (japonica cultivar-group), predic... 40 3.6
39gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 3.6
40gb|AC167702.2| Reniera sp. JGI-2005 clone JGIBAYC-9C21, complete... 40 3.6
41gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 3.6
42gb|DQ022663.1| Synthetic construct clone P2A3 anti-White Spot Sy... 40 3.6
43ref|XM_416189.1| PREDICTED: Gallus gallus similar to Histone H1.... 40 3.6
44ref|XM_590970.2| PREDICTED: Bos taurus similar to ryanodine rece... 40 3.6
45gb|AF268387.1| Homo sapiens laryngeal carcinoma related protein ... 40 3.6
46ref|XM_954155.1| Neurospora crassa OR74A hypothetical protein (N... 40 3.6
47ref|XM_327186.1| Neurospora crassa OR74A hypothetical protein (N... 40 3.6
48gb|AY548452.1| Fremyella diplosiphon clone 3106E11 putative two ... 40 3.6
49gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 3.6
50ref|XM_813532.1| Trypanosoma cruzi strain CL Brener mucin-associ... 40 3.6
51emb|CR956413.12| Pig DNA sequence from clone CH242-178F16 on chr... 40 3.6
52ref|XM_544443.2| PREDICTED: Canis familiaris similar to Brain-sp... 40 3.6
53gb|AC160965.4| Mus musculus BAC clone RP24-334E4 from chromosome... 40 3.6
54gb|BC114214.1| Homo sapiens family with sequence similarity 78, ... 40 3.6
55emb|AL596087.11| Human DNA sequence from clone RP11-9L18 on chro... 40 3.6
56gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 3.6
57gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 3.6
58emb|Z18920.1|YEZ18920 Yersinia enterocolitica wbb gene cluster 40 3.6
59gb|AC110594.5| Homo sapiens chromosome 17, clone CTD-2193J24, co... 40 3.6
60emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 3.6
61ref|NM_001017961.2| Homo sapiens family with sequence similarity... 40 3.6
62emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete ... 40 3.6
63emb|Y13056.1|HSSCFVQ7 H.sapiens mRNA for single-chain Fv fragmen... 40 3.6
64emb|Y13057.1|HSSCFVQ10 H.sapiens mRNA for single-chain Fv fragme... 40 3.6
65gb|AC105299.44| Mus musculus strain C57BL/6J clone rp23-27h12 ma... 40 3.6
66emb|CR613414.1| full-length cDNA clone CS0DJ006YP06 of T cells (... 40 3.6
67emb|CR604061.1| full-length cDNA clone CS0DK003YH11 of HeLa cell... 40 3.6
68gb|AE012450.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 3.6
69gb|AE012321.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 3.6
70gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 3.6
71emb|AJ704535.1| Synthetic construct for anti-PLAP ScFv antibody,... 40 3.6
72emb|AJ704534.1| Synthetic construct for anti-PLAP ScFv antibody,... 40 3.6
73dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
74dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
75dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
76dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
77dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
78dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
79gb|AC069214.14| Homo sapiens 12 BAC RP11-665J20 (Roswell Park Ca... 40 3.6
80dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
81gb|AC126327.6| Homo sapiens chromosome 17, clone RP11-428O23, co... 40 3.6
82dbj|AP004006.5| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
83dbj|AP004675.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
84dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
85dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
86dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
87dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
88dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
89dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
90emb|AJ345034.1|MMU345034 Mus musculus partial mRNA for anti Il-6... 40 3.6
91dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
92dbj|AP003872.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
93dbj|AK024883.1| Homo sapiens cDNA: FLJ21230 fis, clone COL00741 40 3.6
94dbj|AK111379.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.6
95dbj|AK109237.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.6
96gb|AC105300.24| Mus musculus strain C57BL/6J clone rp23-291e5 ma... 40 3.6
97dbj|AK067409.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.6
98gb|AF466646.1| Zea mays putative transposase (Z195D10.1) gene, p... 40 3.6
99gb|AF117206.1|AF117206 Synthetic construct anti-CD55 single-chai... 40 3.6
100gb|AF048774.1|AF048774 Homo sapiens clone H6 anti-HER3 scFv mRNA... 40 3.6
101emb|AJ487614.1|HSA487614 Synthetic construct for anti-beta-galac... 40 3.6
102emb|AJ487613.1|HSA487613 Synthetic construct for anti-beta-galac... 40 3.6
103emb|AJ487612.1|HSA487612 Synthetic construct for anti-beta-galac... 40 3.6
104emb|AJ225093.1|HSA225093 Synthetic construct for anti-beta-galac... 40 3.6
105emb|AJ225092.1|HSA225092 Synthetic construct for anti-beta-galac... 40 3.6
106emb|AJ132608.1|SCO132608 Synthetic construct for anti-crotoxin S... 40 3.6
107emb|AJ132607.1|SCO132607 Synthetic construct for anti-crotoxin S... 40 3.6
108emb|AJ010409.1|ASE010409 artificial sequence for ScFv antibody c... 40 3.6
109gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 3.6
110emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 3.6
111gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.6
112emb|AL732648.3|CNS08C9N Oryza sativa chromosome 12, . BAC OSJNBb... 40 3.6
113emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa... 40 3.6
114gb|AC170884.3| Mus musculus BAC clone RP24-111L17 from chromosom... 40 3.6
115gb|M17018.1|CHKH1LH Chicken H1 histone gene lambda-H1.10 (.10 H1... 40 3.6
116gb|M81772.1|ERWBGPA Erwinia chrysanthemi putative antiterminator... 40 3.6 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  115 bits (58), Expect = 8e-23
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                          
Query: 20     catggcgaagaaggcggcggtgatcgccacgctgctggccctgaacctcctcttcttcac 79
              |||||||| ||| || | ||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 198413 catggcgacgaaagctggggtgatcgccacgctcctggccctgaacctccacttcttcac 198472

                                                        
Query: 80     cttcgccgacgcctgcggctgccactgcgggtcctgccctag 121
              |||| ||||||| ||||||||||| ||||| || ||||||||
Sbjct: 198473 cttctccgacgcgtgcggctgccagtgcggctcatgccctag 198514
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>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0080O10, from chromosome 3, complete sequence
          Length = 127917

 Score =  115 bits (58), Expect = 8e-23
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                         
Query: 20    catggcgaagaaggcggcggtgatcgccacgctgctggccctgaacctcctcttcttcac 79
             |||||||| ||| || | ||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 35480 catggcgacgaaagctggggtgatcgccacgctcctggccctgaacctccacttcttcac 35539

                                                       
Query: 80    cttcgccgacgcctgcggctgccactgcgggtcctgccctag 121
             |||| ||||||| ||||||||||| ||||| || ||||||||
Sbjct: 35540 cttctccgacgcgtgcggctgccagtgcggctcatgccctag 35581
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>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNAb0079B22, from chromosome 3, complete sequence
          Length = 156933

 Score =  115 bits (58), Expect = 8e-23
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                          
Query: 20     catggcgaagaaggcggcggtgatcgccacgctgctggccctgaacctcctcttcttcac 79
              |||||||| ||| || | ||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 132413 catggcgacgaaagctggggtgatcgccacgctcctggccctgaacctccacttcttcac 132472

                                                        
Query: 80     cttcgccgacgcctgcggctgccactgcgggtcctgccctag 121
              |||| ||||||| ||||||||||| ||||| || ||||||||
Sbjct: 132473 cttctccgacgcgtgcggctgccagtgcggctcatgccctag 132514
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score =  115 bits (58), Expect = 8e-23
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                          
Query: 20     catggcgaagaaggcggcggtgatcgccacgctgctggccctgaacctcctcttcttcac 79
              |||||||| ||| || | ||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 198413 catggcgacgaaagctggggtgatcgccacgctcctggccctgaacctccacttcttcac 198472

                                                        
Query: 80     cttcgccgacgcctgcggctgccactgcgggtcctgccctag 121
              |||| ||||||| ||||||||||| ||||| || ||||||||
Sbjct: 198473 cttctccgacgcgtgcggctgccagtgcggctcatgccctag 198514
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>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence
          Length = 162241

 Score =  115 bits (58), Expect = 8e-23
 Identities = 91/102 (89%)
 Strand = Plus / Minus

                                                                         
Query: 20    catggcgaagaaggcggcggtgatcgccacgctgctggccctgaacctcctcttcttcac 79
             |||||||| ||| || | ||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 64243 catggcgacgaaagctggggtgatcgccacgctcctggccctgaacctccacttcttcac 64184

                                                       
Query: 80    cttcgccgacgcctgcggctgccactgcgggtcctgccctag 121
             |||| ||||||| ||||||||||| ||||| || ||||||||
Sbjct: 64183 cttctccgacgcgtgcggctgccagtgcggctcatgccctag 64142
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>dbj|AK063645.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-H06, full
           insert sequence
          Length = 745

 Score =  115 bits (58), Expect = 8e-23
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                       
Query: 20  catggcgaagaaggcggcggtgatcgccacgctgctggccctgaacctcctcttcttcac 79
           |||||||| ||| || | ||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 88  catggcgacgaaagctggggtgatcgccacgctcctggccctgaacctccacttcttcac 147

                                                     
Query: 80  cttcgccgacgcctgcggctgccactgcgggtcctgccctag 121
           |||| ||||||| ||||||||||| ||||| || ||||||||
Sbjct: 148 cttctccgacgcgtgcggctgccagtgcggctcatgccctag 189
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>gb|AY106116.1| Zea mays PCO091367 mRNA sequence
          Length = 842

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                    
Query: 45  gccacgctgctggccctgaacctcctcttcttcaccttcgccgacgcctgcggctgc 101
           ||||| ||||||||||| ||||||||||||||  ||||||||||||| |||||||||
Sbjct: 8   gccactctgctggccctcaacctcctcttctttgccttcgccgacgcatgcggctgc 64
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>emb|CR722992.2|CNS0GKT2 Tetraodon nigroviridis full-length cDNA
          Length = 495

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 6  aggaagaaggaagccatggcgaag 29
          ||||||||||||||||||||||||
Sbjct: 45 aggaagaaggaagccatggcgaag 22
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>emb|CR722982.2|CNS0GKSS Tetraodon nigroviridis full-length cDNA
          Length = 495

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 6  aggaagaaggaagccatggcgaag 29
          ||||||||||||||||||||||||
Sbjct: 45 aggaagaaggaagccatggcgaag 22
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>emb|CR714375.2|CNS0GE5V Tetraodon nigroviridis full-length cDNA
          Length = 495

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 6  aggaagaaggaagccatggcgaag 29
          ||||||||||||||||||||||||
Sbjct: 45 aggaagaaggaagccatggcgaag 22
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>emb|CR713600.2|CNS0GDKC Tetraodon nigroviridis full-length cDNA
          Length = 495

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 6  aggaagaaggaagccatggcgaag 29
          ||||||||||||||||||||||||
Sbjct: 45 aggaagaaggaagccatggcgaag 22
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>emb|CR705446.2|CNS0G79U Tetraodon nigroviridis full-length cDNA
          Length = 495

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 6  aggaagaaggaagccatggcgaag 29
          ||||||||||||||||||||||||
Sbjct: 45 aggaagaaggaagccatggcgaag 22
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>emb|CR704705.2|CNS0G6P9 Tetraodon nigroviridis full-length cDNA
          Length = 496

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 6  aggaagaaggaagccatggcgaag 29
          ||||||||||||||||||||||||
Sbjct: 45 aggaagaaggaagccatggcgaag 22
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>emb|CR699498.2|CNS0G2OM Tetraodon nigroviridis full-length cDNA
          Length = 495

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 6  aggaagaaggaagccatggcgaag 29
          ||||||||||||||||||||||||
Sbjct: 45 aggaagaaggaagccatggcgaag 22
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>emb|CR689042.2|CNS0FUM6 Tetraodon nigroviridis full-length cDNA
          Length = 495

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 6  aggaagaaggaagccatggcgaag 29
          ||||||||||||||||||||||||
Sbjct: 45 aggaagaaggaagccatggcgaag 22
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>emb|CR685219.2|CNS0FRNZ Tetraodon nigroviridis full-length cDNA
          Length = 495

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 6  aggaagaaggaagccatggcgaag 29
          ||||||||||||||||||||||||
Sbjct: 45 aggaagaaggaagccatggcgaag 22
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>emb|CR679206.2|CNS0FN0Y Tetraodon nigroviridis full-length cDNA
          Length = 495

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 6  aggaagaaggaagccatggcgaag 29
          ||||||||||||||||||||||||
Sbjct: 45 aggaagaaggaagccatggcgaag 22
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>emb|CR668108.2|CNS0FEHE Tetraodon nigroviridis full-length cDNA
          Length = 495

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 6  aggaagaaggaagccatggcgaag 29
          ||||||||||||||||||||||||
Sbjct: 45 aggaagaaggaagccatggcgaag 22
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>emb|CR652978.2|CNS0F2T4 Tetraodon nigroviridis full-length cDNA
          Length = 495

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 6  aggaagaaggaagccatggcgaag 29
          ||||||||||||||||||||||||
Sbjct: 45 aggaagaaggaagccatggcgaag 22
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>emb|CR650750.2|CNS0F138 Tetraodon nigroviridis full-length cDNA
          Length = 495

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 6  aggaagaaggaagccatggcgaag 29
          ||||||||||||||||||||||||
Sbjct: 45 aggaagaaggaagccatggcgaag 22
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>emb|AJ634527.1| Homo sapiens partial SCFV gene for single chain variable fragment
           antibody
          Length = 876

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 219 agcggcggaggcggttctggaggaggcggcagcggcgg 256
           ||||| ||||||||||| || ||||| |||||||||||
Sbjct: 427 agcggtggaggcggttcaggcggaggtggcagcggcgg 464
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>ref|XM_518159.1| PREDICTED: Pan troglodytes similar to KIAA1194 protein (LOC462338),
           mRNA
          Length = 1797

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 237 ggaggaggcggcagcggcgga 257
           |||||||||||||||||||||
Sbjct: 42  ggaggaggcggcagcggcgga 62
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>ref|NM_015455.3| Homo sapiens CCR4-NOT transcription complex, subunit 6 (CNOT6),
           mRNA
          Length = 6178

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 237 ggaggaggcggcagcggcgga 257
           |||||||||||||||||||||
Sbjct: 305 ggaggaggcggcagcggcgga 325
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>emb|CR670276.1|CNS0FG5M Tetraodon nigroviridis full-length cDNA
          Length = 1443

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 238 gaggaggcggcagcggcggat 258
           |||||||||||||||||||||
Sbjct: 889 gaggaggcggcagcggcggat 909
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>gb|AE012420.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 328
            of 460 of the complete genome
          Length = 13708

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 33   gcggcggtgatcgccacgctg 53
            |||||||||||||||||||||
Sbjct: 4736 gcggcggtgatcgccacgctg 4716
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 33      gcggcggtgatcgccacgctg 53
               |||||||||||||||||||||
Sbjct: 1332296 gcggcggtgatcgccacgctg 1332316



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 92      ctgcggctgccactgcgggt 111
               ||||||||||||||||||||
Sbjct: 2379043 ctgcggctgccactgcgggt 2379024



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 242     aggcggcagcggcggatgcg 261
               ||||||||||||||||||||
Sbjct: 1006023 aggcggcagcggcggatgcg 1006042
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>gb|AC034213.5|AC034213 Homo sapiens chromosome 5 clone CTC-573N18, complete sequence
          Length = 150179

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 237   ggaggaggcggcagcggcgga 257
             |||||||||||||||||||||
Sbjct: 97785 ggaggaggcggcagcggcgga 97805
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 236     tggaggaggcggcagcggcgg 256
               |||||||||||||||||||||
Sbjct: 1703919 tggaggaggcggcagcggcgg 1703899
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 220     gcggcggaggcggttctggaggagg 244
               |||| ||||||||||||||||||||
Sbjct: 1555095 gcggtggaggcggttctggaggagg 1555119
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>dbj|AB033020.1| Homo sapiens mRNA for KIAA1194 protein, partial cds
          Length = 6255

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 237 ggaggaggcggcagcggcgga 257
           |||||||||||||||||||||
Sbjct: 212 ggaggaggcggcagcggcgga 232
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>ref|XM_482291.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1065

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 217 gaagcggcggaggcggttctggag 240
           |||||||||||||||| |||||||
Sbjct: 275 gaagcggcggaggcggatctggag 298
to top
>ref|XM_483613.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 592

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 237 ggaggaggcggcagcggcgg 256
           ||||||||||||||||||||
Sbjct: 384 ggaggaggcggcagcggcgg 403
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>ref|XM_482106.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 261

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 ggaggaggcggcagcggcgg 256
           ||||||||||||||||||||
Sbjct: 62  ggaggaggcggcagcggcgg 43
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>ref|XM_509433.1| PREDICTED: Pan troglodytes similar to SPPL3 protein;
           presenilin-like protein 4; intramembrane protease
           (LOC452314), mRNA
          Length = 1824

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 236 tggaggaggcggcagcggcggatg 259
           ||||||||| ||||||||||||||
Sbjct: 327 tggaggaggaggcagcggcggatg 350
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>ref|XM_464692.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 990

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 237 ggaggaggcggcagcggcgg 256
           ||||||||||||||||||||
Sbjct: 721 ggaggaggcggcagcggcgg 740
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>ref|XM_464691.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2595

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 ggaggaggcggcagcggcgg 256
           ||||||||||||||||||||
Sbjct: 152 ggaggaggcggcagcggcgg 133
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>ref|NM_024835.2| Homo sapiens zinc finger protein 403 (ZNF403), mRNA
          Length = 2802

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 237 ggaggaggcggcagcggcgg 256
           ||||||||||||||||||||
Sbjct: 154 ggaggaggcggcagcggcgg 173
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>ref|NM_185799.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 375

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  cgcctgcggctgccactgcg 108
           ||||||||||||||||||||
Sbjct: 366 cgcctgcggctgccactgcg 347
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     gcggcggtgatcgccacgct 52
              ||||||||||||||||||||
Sbjct: 929082 gcggcggtgatcgccacgct 929063
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>gb|AC167702.2| Reniera sp. JGI-2005 clone JGIBAYC-9C21, complete sequence
          Length = 38590

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ctcctcttcttcaccttcgc 85
            ||||||||||||||||||||
Sbjct: 4961 ctcctcttcttcaccttcgc 4980
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 23      ggcgaagaaggcggcggtgatcgc 46
               ||||||||||||||||| ||||||
Sbjct: 3344404 ggcgaagaaggcggcggcgatcgc 3344381
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>gb|DQ022663.1| Synthetic construct clone P2A3 anti-White Spot Syndrome Virus
           single-chain variable fragment antibody mRNA, partial
           cds
          Length = 618

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 225 ggaggcggttctggaggaggcggcagcggcgg 256
           |||||||||||||| ||||| ||||| |||||
Sbjct: 367 ggaggcggttctggtggaggtggcagtggcgg 398
to top
>ref|XM_416189.1| PREDICTED: Gallus gallus similar to Histone H1.10 (Methylated DNA
           binding protein-2-H1) (MDBP-2-H1) (LOC417948), mRNA
          Length = 697

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 12  aaggaagccatggcgaagaaggcggcgg 39
           |||| ||||| |||||||||||||||||
Sbjct: 659 aaggcagccaaggcgaagaaggcggcgg 686
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>ref|XM_590970.2| PREDICTED: Bos taurus similar to ryanodine receptor 1 (skeletal)
            (LOC513307), partial mRNA
          Length = 6741

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 63   aacctcctcttcttcaccttcgcc 86
            |||||||||||||||| |||||||
Sbjct: 5703 aacctcctcttcttcagcttcgcc 5680
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>gb|AF268387.1| Homo sapiens laryngeal carcinoma related protein 1 mRNA, complete
           cds
          Length = 3448

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 237 ggaggaggcggcagcggcgg 256
           ||||||||||||||||||||
Sbjct: 141 ggaggaggcggcagcggcgg 160
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>ref|XM_954155.1| Neurospora crassa OR74A hypothetical protein (NCU06901.1) partial
           mRNA
          Length = 699

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 229 gcggttctggaggaggcggc 248
           ||||||||||||||||||||
Sbjct: 273 gcggttctggaggaggcggc 254
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>ref|XM_327186.1| Neurospora crassa OR74A hypothetical protein (NCU06901.1) partial
           mRNA
          Length = 699

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 229 gcggttctggaggaggcggc 248
           ||||||||||||||||||||
Sbjct: 273 gcggttctggaggaggcggc 254
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>gb|AY548452.1| Fremyella diplosiphon clone 3106E11 putative two component hybrid
            sensor regulator gene, partial cds; and putative two
            component hybrid sensor kinase, TorS-like protein, and
            RsbS-like protein genes, complete cds
          Length = 5596

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 90   gcctgcggctgccactgcgg 109
            ||||||||||||||||||||
Sbjct: 4321 gcctgcggctgccactgcgg 4302
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 23     ggcgaagaaggcggcggtgatcgc 46
              ||||||||||||||||| ||||||
Sbjct: 642232 ggcgaagaaggcggcggcgatcgc 642255
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>ref|XM_813532.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein
           (MASP) (Tc00.1047053510627.80) partial mRNA
          Length = 993

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 222 ggcggaggcggttctggagg 241
           ||||||||||||||||||||
Sbjct: 409 ggcggaggcggttctggagg 428
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>emb|CR956413.12| Pig DNA sequence from clone CH242-178F16 on chromosome 17, complete
             sequence
          Length = 73061

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   ggaggaggcggcagcggcgg 256
             ||||||||||||||||||||
Sbjct: 40676 ggaggaggcggcagcggcgg 40657
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>ref|XM_544443.2| PREDICTED: Canis familiaris similar to Brain-specific angiogenesis
           inhibitor 2 precursor, transcript variant 1 (LOC487317),
           mRNA
          Length = 4871

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 237 ggaggaggcggcagcggcgg 256
           ||||||||||||||||||||
Sbjct: 357 ggaggaggcggcagcggcgg 376
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>gb|AC160965.4| Mus musculus BAC clone RP24-334E4 from chromosome 1, complete sequence
          Length = 182270

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     tggtaggaagaaggaagcca 21
             ||||||||||||||||||||
Sbjct: 93277 tggtaggaagaaggaagcca 93258
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>gb|BC114214.1| Homo sapiens family with sequence similarity 78, member B, mRNA
           (cDNA clone MGC:131653 IMAGE:5588830), complete cds
          Length = 1676

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 ggaggaggcggcagcggcgg 256
           ||||||||||||||||||||
Sbjct: 218 ggaggaggcggcagcggcgg 199
to top
>emb|AL596087.11| Human DNA sequence from clone RP11-9L18 on chromosome 1 Contains the 5'
             end of a novel gene, a Ewing sarcoma breakpoint region 1
             (EWSR1) pseudogene and two CpG islands, complete sequence
          Length = 180718

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   ggaggaggcggcagcggcgg 256
             ||||||||||||||||||||
Sbjct: 46616 ggaggaggcggcagcggcgg 46635
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 38      ggtgatcgccacgctgctgg 57
               ||||||||||||||||||||
Sbjct: 2625787 ggtgatcgccacgctgctgg 2625806
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 22      tggcgaagaaggcggcggtg 41
               ||||||||||||||||||||
Sbjct: 4051888 tggcgaagaaggcggcggtg 4051869
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>emb|Z18920.1|YEZ18920 Yersinia enterocolitica wbb gene cluster
          Length = 11215

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 249  agcggcggatgcggttctgg 268
            ||||||||||||||||||||
Sbjct: 1109 agcggcggatgcggttctgg 1128
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>gb|AC110594.5| Homo sapiens chromosome 17, clone CTD-2193J24, complete sequence
          Length = 159490

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   ggaggaggcggcagcggcgg 256
             ||||||||||||||||||||
Sbjct: 95684 ggaggaggcggcagcggcgg 95703
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 23     ggcgaagaaggcggcggtgatcgc 46
              ||||||||||||||||| ||||||
Sbjct: 450825 ggcgaagaaggcggcggcgatcgc 450848
to top
>ref|NM_001017961.2| Homo sapiens family with sequence similarity 78, member B (FAM78B),
           mRNA
          Length = 1676

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 ggaggaggcggcagcggcgg 256
           ||||||||||||||||||||
Sbjct: 218 ggaggaggcggcagcggcgg 199
to top
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29
          Length = 290850

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     ccttcgccgacgcctgcggc 98
              ||||||||||||||||||||
Sbjct: 290253 ccttcgccgacgcctgcggc 290234
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>emb|Y13056.1|HSSCFVQ7 H.sapiens mRNA for single-chain Fv fragment, isolate C1q/7
          Length = 720

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 225 ggaggcggttctggaggaggcggcagcggcgg 256
           ||||||||||| || ||||| |||||||||||
Sbjct: 355 ggaggcggttcaggcggaggtggcagcggcgg 386
to top
>emb|Y13057.1|HSSCFVQ10 H.sapiens mRNA for single-chain Fv fragment, isolate C1q/10
          Length = 732

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 225 ggaggcggttctggaggaggcggcagcggcgg 256
           ||||||||||| || ||||| |||||||||||
Sbjct: 367 ggaggcggttcaggcggaggtggcagcggcgg 398
to top
>gb|AC105299.44| Mus musculus strain C57BL/6J clone rp23-27h12 map 17, complete sequence
          Length = 221749

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   ggaggaggcggcagcggcgg 256
             ||||||||||||||||||||
Sbjct: 32421 ggaggaggcggcagcggcgg 32440
to top
>emb|CR613414.1| full-length cDNA clone CS0DJ006YP06 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 1518

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 ggaggaggcggcagcggcgg 256
           ||||||||||||||||||||
Sbjct: 172 ggaggaggcggcagcggcgg 153
to top
>emb|CR604061.1| full-length cDNA clone CS0DK003YH11 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 1751

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 237 ggaggaggcggcagcggcgg 256
           ||||||||||||||||||||
Sbjct: 185 ggaggaggcggcagcggcgg 204
to top
>gb|AE012450.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 358
            of 460 of the complete genome
          Length = 11329

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  aggcggcagcggcggatgcg 261
            ||||||||||||||||||||
Sbjct: 7332 aggcggcagcggcggatgcg 7313
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>gb|AE012321.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 229
            of 460 of the complete genome
          Length = 10029

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 92   ctgcggctgccactgcgggt 111
            ||||||||||||||||||||
Sbjct: 5534 ctgcggctgccactgcgggt 5553
to top
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 220    gcggcggaggcggttctggaggaggcgg 247
              ||||||| ||||||||||| ||||||||
Sbjct: 384736 gcggcggtggcggttctggtggaggcgg 384763
to top
>emb|AJ704535.1| Synthetic construct for anti-PLAP ScFv antibody, clone GLD5
          Length = 738

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 225 ggaggcggttctggaggaggcggcagcggcgg 256
           ||||||||||| || ||||| |||||||||||
Sbjct: 358 ggaggcggttcaggcggaggtggcagcggcgg 389
to top
>emb|AJ704534.1| Synthetic construct for anti-PLAP ScFv antibody, clone GLA12
          Length = 747

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 225 ggaggcggttctggaggaggcggcagcggcgg 256
           ||||||||||| || ||||| |||||||||||
Sbjct: 355 ggaggcggttcaggcggaggtggcagcggcgg 386
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 24       gcgaagaaggcggcggtgatcgcc 47
                |||||||||||||||| |||||||
Sbjct: 25872659 gcgaagaaggcggcggcgatcgcc 25872636



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 237     ggaggaggcggcagcggcgg 256
               ||||||||||||||||||||
Sbjct: 7405199 ggaggaggcggcagcggcgg 7405180
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 237      ggaggaggcggcagcggcgg 256
                ||||||||||||||||||||
Sbjct: 27285590 ggaggaggcggcagcggcgg 27285609



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 217      gaagcggcggaggcggttctggag 240
                |||||||||||||||| |||||||
Sbjct: 19265340 gaagcggcggaggcggatctggag 19265317



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 237      ggaggaggcggcagcggcgg 256
                ||||||||||||||||||||
Sbjct: 17882885 ggaggaggcggcagcggcgg 17882866
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 237      ggaggaggcggcagcggcgg 256
                ||||||||||||||||||||
Sbjct: 18629423 ggaggaggcggcagcggcgg 18629404
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 237     ggaggaggcggcagcggcgg 256
               ||||||||||||||||||||
Sbjct: 9819831 ggaggaggcggcagcggcgg 9819850



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 89      cgcctgcggctgccactgcg 108
               ||||||||||||||||||||
Sbjct: 9355989 cgcctgcggctgccactgcg 9355970
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 237     ggaggaggcggcagcggcgg 256
               ||||||||||||||||||||
Sbjct: 6732203 ggaggaggcggcagcggcgg 6732222
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 237      ggaggaggcggcagcggcgg 256
                ||||||||||||||||||||
Sbjct: 19979155 ggaggaggcggcagcggcgg 19979174
to top
>gb|AC069214.14| Homo sapiens 12 BAC RP11-665J20 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 94547

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 236  tggaggaggcggcagcggcggatg 259
            ||||||||| ||||||||||||||
Sbjct: 7107 tggaggaggaggcagcggcggatg 7130
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>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0062A24
          Length = 148362

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   ggaggaggcggcagcggcgg 256
             ||||||||||||||||||||
Sbjct: 82064 ggaggaggcggcagcggcgg 82083
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>gb|AC126327.6| Homo sapiens chromosome 17, clone RP11-428O23, complete sequence
          Length = 181517

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 237  ggaggaggcggcagcggcgg 256
            ||||||||||||||||||||
Sbjct: 5888 ggaggaggcggcagcggcgg 5869
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>dbj|AP004006.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1197_D06
          Length = 103844

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   ggaggaggcggcagcggcgg 256
             ||||||||||||||||||||
Sbjct: 54477 ggaggaggcggcagcggcgg 54458
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>dbj|AP004675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0709D11
          Length = 146856

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    ggaggaggcggcagcggcgg 256
              ||||||||||||||||||||
Sbjct: 104391 ggaggaggcggcagcggcgg 104372
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>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0005E02
          Length = 89380

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   ggaggaggcggcagcggcgg 256
             ||||||||||||||||||||
Sbjct: 81965 ggaggaggcggcagcggcgg 81946
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>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0456E06
          Length = 164353

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    ggaggaggcggcagcggcgg 256
              ||||||||||||||||||||
Sbjct: 110073 ggaggaggcggcagcggcgg 110092
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>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0063H02
          Length = 152326

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   ggaggaggcggcagcggcgg 256
             ||||||||||||||||||||
Sbjct: 16466 ggaggaggcggcagcggcgg 16485
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>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0676F10
          Length = 142510

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     cgcctgcggctgccactgcg 108
              ||||||||||||||||||||
Sbjct: 123330 cgcctgcggctgccactgcg 123311
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>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0038C05
          Length = 152941

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    cgcctgcggctgccactgcg 108
             ||||||||||||||||||||
Sbjct: 84399 cgcctgcggctgccactgcg 84380
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>dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1131G07
          Length = 133992

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   ggaggaggcggcagcggcgg 256
             ||||||||||||||||||||
Sbjct: 53256 ggaggaggcggcagcggcgg 53275
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>emb|AJ345034.1|MMU345034 Mus musculus partial mRNA for anti Il-6 antibody (scFv gene)
          Length = 738

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 225 ggaggcggttctggaggaggcggcagcggcgg 256
           ||||||||||| || ||||| |||||||||||
Sbjct: 361 ggaggcggttcaggcggaggtggcagcggcgg 392
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>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0623F08
          Length = 154540

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    ggaggaggcggcagcggcgg 256
              ||||||||||||||||||||
Sbjct: 108793 ggaggaggcggcagcggcgg 108812
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>dbj|AP003872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1118_A03
          Length = 109873

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 217   gaagcggcggaggcggttctggag 240
             |||||||||||||||| |||||||
Sbjct: 38353 gaagcggcggaggcggatctggag 38330
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>dbj|AK024883.1| Homo sapiens cDNA: FLJ21230 fis, clone COL00741
          Length = 2344

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 237 ggaggaggcggcagcggcgg 256
           ||||||||||||||||||||
Sbjct: 177 ggaggaggcggcagcggcgg 196
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>dbj|AK111379.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-B05, full
           insert sequence
          Length = 990

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 237 ggaggaggcggcagcggcgg 256
           ||||||||||||||||||||
Sbjct: 721 ggaggaggcggcagcggcgg 740
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>dbj|AK109237.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-F09, full
           insert sequence
          Length = 592

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 237 ggaggaggcggcagcggcgg 256
           ||||||||||||||||||||
Sbjct: 384 ggaggaggcggcagcggcgg 403
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>gb|AC105300.24| Mus musculus strain C57BL/6J clone rp23-291e5 map 17, complete sequence
          Length = 168882

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   ggaggaggcggcagcggcgg 256
             ||||||||||||||||||||
Sbjct: 90936 ggaggaggcggcagcggcgg 90917
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>dbj|AK067409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102H16, full
           insert sequence
          Length = 3780

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 ggaggaggcggcagcggcgg 256
           ||||||||||||||||||||
Sbjct: 45  ggaggaggcggcagcggcgg 26
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>gb|AF466646.1| Zea mays putative transposase (Z195D10.1) gene, partial cds;
             glycyl-tRNA synthetase (Z195D10.2), ornithine
             carbamoyltransferase (Z195D10.3), putative gag protein
             (Z195D10.5), putative SET-domain transcriptional regulator
             (Z195D10.7), putative oxysterol-binding protein
             (Z195D10.8), putative polyprotein (Z195D10.9), putative
             oxysterol-binding protein (Z195D10.10), putative gag-pol
             polyprotein (Z195D10.11), putative
             phosphatidylinositol-4-phosphate-5-kinase (Z195D10.12),
             hypothetical protein (Z195D10.15), putative gag-pol
             polyprotein (Z195D10.16), putative polyprotein
             (Z195D10.17), putative retrotransposon protein
             (Z195D10.18), and prpol (Z195D10.19) genes, complete cds;
             and putative teosinte branched2 (Z195D10.20) gene, partial
             cds
          Length = 141939

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 236   tggaggaggcggcagcggcggatg 259
             ||||||| ||||||||||||||||
Sbjct: 59023 tggaggatgcggcagcggcggatg 59046
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>gb|AF117206.1|AF117206 Synthetic construct anti-CD55 single-chain Fv antibody mRNA,
           partial cds
          Length = 738

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 225 ggaggcggttctggaggaggcggcagcggcgg 256
           ||||||||||| || ||||| |||||||||||
Sbjct: 367 ggaggcggttcaggcggaggtggcagcggcgg 398
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>gb|AF048774.1|AF048774 Homo sapiens clone H6 anti-HER3 scFv mRNA, partial cds
          Length = 732

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 225 ggaggcggttctggaggaggcggcagcggcgg 256
           ||||||||||| || ||||| |||||||||||
Sbjct: 370 ggaggcggttcaggcggaggtggcagcggcgg 401
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>emb|AJ487614.1|HSA487614 Synthetic construct for anti-beta-galactosidase ScFv antibody,
           clone Gal12
          Length = 758

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 225 ggaggcggttctggaggaggcggcagcggcgg 256
           ||||||||||| || ||||| |||||||||||
Sbjct: 376 ggaggcggttcaggcggaggtggcagcggcgg 407
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>emb|AJ487613.1|HSA487613 Synthetic construct for anti-beta-galactosidase ScFv antibody,
           clone Gal10
          Length = 746

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 225 ggaggcggttctggaggaggcggcagcggcgg 256
           ||||||||||| || ||||| |||||||||||
Sbjct: 373 ggaggcggttcaggcggaggtggcagcggcgg 404
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>emb|AJ487612.1|HSA487612 Synthetic construct for anti-beta-galactosidase ScFv antibody,
           clone Gal3
          Length = 746

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 225 ggaggcggttctggaggaggcggcagcggcgg 256
           ||||||||||| || ||||| |||||||||||
Sbjct: 364 ggaggcggttcaggcggaggtggcagcggcgg 395
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>emb|AJ225093.1|HSA225093 Synthetic construct for anti-beta-galactosidase ScFv antibody,
           clone scFv2
          Length = 807

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 225 ggaggcggttctggaggaggcggcagcggcgg 256
           ||||||||||| || ||||| |||||||||||
Sbjct: 370 ggaggcggttcaggcggaggtggcagcggcgg 401
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>emb|AJ225092.1|HSA225092 Synthetic construct for anti-beta-galactosidase ScFv antibody,
           clone scFv13
          Length = 819

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 225 ggaggcggttctggaggaggcggcagcggcgg 256
           ||||||||||| || ||||| |||||||||||
Sbjct: 373 ggaggcggttcaggcggaggtggcagcggcgg 404
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>emb|AJ132608.1|SCO132608 Synthetic construct for anti-crotoxin ScFv antibody, clone libary
           CTX-scFv6
          Length = 753

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 225 ggaggcggttctggaggaggcggcagcggcgg 256
           ||||||||||| || ||||| |||||||||||
Sbjct: 376 ggaggcggttcaggcggaggtggcagcggcgg 407
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>emb|AJ132607.1|SCO132607 Synthetic construct for anti-crotoxin ScFv antibody, clone libary
           CTX-scFv1
          Length = 759

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 225 ggaggcggttctggaggaggcggcagcggcgg 256
           ||||||||||| || ||||| |||||||||||
Sbjct: 385 ggaggcggttcaggcggaggtggcagcggcgg 416
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>emb|AJ010409.1|ASE010409 artificial sequence for ScFv antibody containing a synthetic
           linker, partial
          Length = 735

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 225 ggaggcggttctggaggaggcggcagcggcgg 256
           ||||||||||| || ||||| |||||||||||
Sbjct: 361 ggaggcggttcaggcggaggtggcagcggcgg 392
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 32     ggcggcggtgatcgccacgctgctggcc 59
              ||||||| || |||||||||||||||||
Sbjct: 227339 ggcggcgctgttcgccacgctgctggcc 227366
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 241    gaggcggcagcggcggatgc 260
              ||||||||||||||||||||
Sbjct: 900834 gaggcggcagcggcggatgc 900853
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 24       gcgaagaaggcggcggtgatcgcc 47
                |||||||||||||||| |||||||
Sbjct: 25800835 gcgaagaaggcggcggcgatcgcc 25800812



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 237     ggaggaggcggcagcggcgg 256
               ||||||||||||||||||||
Sbjct: 7405078 ggaggaggcggcagcggcgg 7405059
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>emb|AL732648.3|CNS08C9N Oryza sativa chromosome 12, . BAC OSJNBb0020J15 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 133575

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    ggaggaggcggcagcggcgg 256
              ||||||||||||||||||||
Sbjct: 120209 ggaggaggcggcagcggcgg 120190
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>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137492

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 24    gcgaagaaggcggcggtgatcgcc 47
             |||||||||||||||| |||||||
Sbjct: 94110 gcgaagaaggcggcggcgatcgcc 94087
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>gb|AC170884.3| Mus musculus BAC clone RP24-111L17 from chromosome 17, complete sequence
          Length = 180189

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    ggaggaggcggcagcggcgg 256
              ||||||||||||||||||||
Sbjct: 125430 ggaggaggcggcagcggcgg 125449
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>gb|M17018.1|CHKH1LH Chicken H1 histone gene lambda-H1.10 (.10 H1), complete cds and
           promoters
          Length = 1497

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 12  aaggaagccatggcgaagaaggcggcgg 39
           |||| ||||| |||||||||||||||||
Sbjct: 872 aaggcagccaaggcgaagaaggcggcgg 899
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>gb|M81772.1|ERWBGPA Erwinia chrysanthemi putative antiterminator (argG) gene, complete
            cds; beta-glucoside permease (arbF) gene, complete cds;
            phospho- beta-glucosidase (arbB) gene, complete cds;
            unidentified open reading frame, 5' end
          Length = 5065

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 32   ggcggcggtgatcgccacgctgctggcc 59
            |||||||||||||| ||||||| |||||
Sbjct: 2642 ggcggcggtgatcggcacgctgttggcc 2669


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,901,449
Number of Sequences: 3902068
Number of extensions: 1901449
Number of successful extensions: 65136
Number of sequences better than 10.0: 116
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63631
Number of HSP's gapped (non-prelim): 1505
length of query: 274
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 252
effective length of database: 17,147,199,772
effective search space: 4321094342544
effective search space used: 4321094342544
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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