| Clone Name | bast12g01 |
|---|---|
| Clone Library Name | barley_pub |
>PICA_RAT (O55012) Phosphatidylinositol-binding clathrin assembly protein| (Clathrin assembly lymphoid myeloid leukemia protein) (rCALM) Length = 640 Score = 31.6 bits (70), Expect = 0.53 Identities = 15/38 (39%), Positives = 25/38 (65%) Frame = +1 Query: 7 ASPLSISAGRDLKQASSDLASQPAAMSSSSDNPNEVTD 120 ASP+S SAG + + D+ S P++ +S+S PN++ D Sbjct: 358 ASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLD 395
>PICAL_HUMAN (Q13492) Phosphatidylinositol-binding clathrin assembly protein| (Clathrin assembly lymphoid myeloid leukemia protein) Length = 652 Score = 31.6 bits (70), Expect = 0.53 Identities = 15/38 (39%), Positives = 25/38 (65%) Frame = +1 Query: 7 ASPLSISAGRDLKQASSDLASQPAAMSSSSDNPNEVTD 120 ASP+S SAG + + D+ S P++ +S+S PN++ D Sbjct: 358 ASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLD 395
>PICA_MOUSE (Q7M6Y3) Phosphatidylinositol-binding clathrin assembly protein| (Clathrin assembly lymphoid myeloid leukemia) (CALM) Length = 660 Score = 31.6 bits (70), Expect = 0.53 Identities = 15/38 (39%), Positives = 25/38 (65%) Frame = +1 Query: 7 ASPLSISAGRDLKQASSDLASQPAAMSSSSDNPNEVTD 120 ASP+S SAG + + D+ S P++ +S+S PN++ D Sbjct: 358 ASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLD 395
>MNTH_LISMO (Q8Y773) Probable manganese transport protein mntH| Length = 448 Score = 28.9 bits (63), Expect = 3.4 Identities = 15/23 (65%), Positives = 16/23 (69%) Frame = +1 Query: 7 ASPLSISAGRDLKQASSDLASQP 75 AS L I GRDL QASSD S+P Sbjct: 93 ASKLGIVTGRDLAQASSDHFSKP 115
>MNTH_LISMF (Q71ZP6) Probable manganese transport protein mntH| Length = 448 Score = 28.9 bits (63), Expect = 3.4 Identities = 15/23 (65%), Positives = 16/23 (69%) Frame = +1 Query: 7 ASPLSISAGRDLKQASSDLASQP 75 AS L I GRDL QASSD S+P Sbjct: 93 ASKLGIVTGRDLAQASSDHFSKP 115
>MNTH_LISIN (Q92BT1) Probable manganese transport protein mntH| Length = 448 Score = 28.9 bits (63), Expect = 3.4 Identities = 15/23 (65%), Positives = 16/23 (69%) Frame = +1 Query: 7 ASPLSISAGRDLKQASSDLASQP 75 AS L I GRDL QASSD S+P Sbjct: 93 ASKLGIVTGRDLAQASSDHFSKP 115
>EVC_HUMAN (P57679) Ellis-van Creveld syndrome protein (DWF-1)| Length = 992 Score = 28.1 bits (61), Expect = 5.9 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = -2 Query: 125 PRSVTSLGLSDEEDMAAGWLARSELACFRSRPAEMESGDAG 3 P+ LG+ + ED+A+G L+ R E E+GD+G Sbjct: 940 PQERGDLGVPNNEDLASGDQTSGSLSSKRLSQQESEAGDSG 980 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.309 0.130 0.358 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,808,342 Number of Sequences: 219361 Number of extensions: 337415 Number of successful extensions: 1098 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1082 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1098 length of database: 80,573,946 effective HSP length: 77 effective length of database: 63,683,149 effective search space used: 1528395576 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits)