ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast12e01 |
|---|---|
| Clone Library Name | barley_pub |
>IF2_CHRVO (Q7NY13) Translation initiation factor IF-2| Length = 964 Score = 36.2 bits (82), Expect = 0.020 Identities = 28/89 (31%), Positives = 30/89 (33%), Gaps = 2/89 (2%) Frame = -2 Query: 367 GVLGRHRRAVPADAAGGHGRRPQAKRWSVRPSGEGDPGPGPQRGFGERRG--PCGV*SXX 194 G G R AG G RP RP+G GD GP P G+ RG P G Sbjct: 244 GPRGNDNRGPRPAGAGDRGPRPGGDNRGPRPAGAGDRGPRPG---GDNRGPRPAGAGDRG 300 Query: 193 XXXXXXXXXXXXELAVGAKSSRPGPGNSG 107 A SRPG G G Sbjct: 301 PRPAPAAAAPSQPPAPAPGGSRPGKGKKG 329
>M3K12_HUMAN (Q12852) Mitogen-activated protein kinase kinase kinase 12 (EC| 2.7.11.25) (Mixed lineage kinase) (Leucine-zipper protein kinase) (ZPK) (Dual leucine zipper bearing kinase) (DLK) (MAPK-upstream kinase) (MUK) Length = 859 Score = 34.7 bits (78), Expect = 0.058 Identities = 29/82 (35%), Positives = 35/82 (42%), Gaps = 8/82 (9%) Frame = -3 Query: 357 GAIGEPFPPTPLAAMAGDLRRS-DGPYGRAGKA------TPAPDL-SGDLGNGEARAECS 202 GA GEP PP G L +G GR G TPA L + + R S Sbjct: 660 GAKGEPPPPVGPGEGVGLLGTGREGTSGRGGSRAGSQHLTPAALLYRAAVTRSQKRGISS 719 Query: 201 RESEGERDGAVVISESSRWARS 136 E EGE D V ++ S RW +S Sbjct: 720 EEEEGEVDSEVELTSSQRWPQS 741
>M3K12_RAT (Q63796) Mitogen-activated protein kinase kinase kinase 12 (EC| 2.7.11.25) (Mixed lineage kinase) (Leucine-zipper protein kinase) (ZPK) (Dual leucine zipper bearing kinase) (DLK) (MAPK-upstream kinase) (MUK) Length = 888 Score = 32.0 bits (71), Expect = 0.38 Identities = 28/79 (35%), Positives = 32/79 (40%), Gaps = 8/79 (10%) Frame = -3 Query: 357 GAIGEPFPPTPLAAMAGDLRRS-DGPYGRAGKA------TPAPDL-SGDLGNGEARAECS 202 GA GEP PP G L +G GR G TPA L + + R S Sbjct: 693 GAKGEPPPPVGPGEGVGLLGTGREGTTGRGGSRAGYQHLTPAALLYRAAVTRSQKRGISS 752 Query: 201 RESEGERDGAVVISESSRW 145 E EGE D V + S RW Sbjct: 753 EEEEGEVDSEVELPPSQRW 771
>M3K12_MOUSE (Q60700) Mitogen-activated protein kinase kinase kinase 12 (EC| 2.7.11.25) (Mixed lineage kinase) (Leucine-zipper protein kinase) (ZPK) (Dual leucine zipper bearing kinase) (DLK) (MAPK-upstream kinase) (MUK) Length = 888 Score = 32.0 bits (71), Expect = 0.38 Identities = 28/79 (35%), Positives = 32/79 (40%), Gaps = 8/79 (10%) Frame = -3 Query: 357 GAIGEPFPPTPLAAMAGDLRRS-DGPYGRAGKA------TPAPDL-SGDLGNGEARAECS 202 GA GEP PP G L +G GR G TPA L + + R S Sbjct: 693 GAKGEPPPPVGPGEGVGLLGTGREGTAGRGGNRAGSQHLTPAALLYRAAVTRSQKRGISS 752 Query: 201 RESEGERDGAVVISESSRW 145 E EGE D V + S RW Sbjct: 753 EEEEGEVDSEVELPPSQRW 771
>TOP3A_DROME (Q9NG98) DNA topoisomerase 3-alpha (EC 5.99.1.2) (DNA topoisomerase| III alpha) Length = 1250 Score = 31.2 bits (69), Expect = 0.64 Identities = 16/43 (37%), Positives = 18/43 (41%) Frame = -2 Query: 337 PADAAGGHGRRPQAKRWSVRPSGEGDPGPGPQRGFGERRGPCG 209 P GG GR + WS P G G G G G+G G G Sbjct: 777 PGPGGGGSGRGAGSGGWSSGPGGGGSGGGGGSGGWGSGTGGGG 819
>CLIC6_HUMAN (Q96NY7) Chloride intracellular channel 6| Length = 704 Score = 31.2 bits (69), Expect = 0.64 Identities = 18/46 (39%), Positives = 25/46 (54%) Frame = -3 Query: 312 AGDLRRSDGPYGRAGKATPAPDLSGDLGNGEARAECSRESEGERDG 175 AGD ++GP GRA + + P SGD G+ +AE + GE G Sbjct: 276 AGDSMDAEGPAGRARRVSGEPQQSGD-GSLSPQAEAIEVAAGESAG 320
>KPC1_ASPNG (Q00078) Protein kinase C-like (EC 2.7.11.13)| Length = 1096 Score = 31.2 bits (69), Expect = 0.64 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -2 Query: 331 DAAGGHGRRPQAKRWSVRPSGEGDPGPGPQRGFGE 227 D AGG G S PSG G PG P +G+G+ Sbjct: 370 DTAGGAG--------SAHPSGPGGPGAAPSQGYGD 396
>PGK_MYCAV (O32848) Phosphoglycerate kinase (EC 2.7.2.3) (Fragment)| Length = 388 Score = 30.8 bits (68), Expect = 0.84 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 3/46 (6%) Frame = -2 Query: 343 AVPADAAGGHGRRPQAKRWSVRPSGEGDPG---PGPQRGFGERRGP 215 A P AG GRR + R +G G G PGP+RG RR P Sbjct: 74 AGPGVVAGPGGRRARRAAGPARAAGLGRGGHRRPGPRRGVDRRRRP 119
>CL43_BOVIN (P42916) Collectin-43 precursor (CL-43) (43 kDa collectin)| Length = 321 Score = 30.8 bits (68), Expect = 0.84 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Frame = -2 Query: 343 AVPADAAGGHGRRPQAKRWSVRPSGE-GDPGPGPQRGFGERRGPCG 209 A PAD+ GH R + P GE GDPGP G R GP G Sbjct: 41 APPADSLRGHDGRDGKEG----PQGEKGDPGPPGMPGPAGREGPSG 82
>HMGN2_MOUSE (P09602) Nonhistone chromosomal protein HMG-17 (High-mobility group| nucleosome-binding domain-containing protein 2) Length = 89 Score = 30.4 bits (67), Expect = 1.1 Identities = 16/55 (29%), Positives = 26/55 (47%) Frame = -3 Query: 342 PFPPTPLAAMAGDLRRSDGPYGRAGKATPAPDLSGDLGNGEARAECSRESEGERD 178 P P P A + P G+ GKA D + NG+A+ + ++++EG D Sbjct: 33 PPKPEPKPKKAPAKKGEKVPKGKKGKADAGKDANNPAENGDAKTDQAQKAEGAGD 87
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 9/45 (20%) Frame = -2 Query: 334 ADAAGGHGRRPQAKRWSVRP---------SGEGDPGPGPQRGFGE 227 A AGG RR + +RW +G G GPGP+ G GE Sbjct: 998 AGEAGGGARRRRRRRWDDEAGLLGPERGQAGRGLRGPGPRGGLGE 1042 Score = 27.7 bits (60), Expect = 7.1 Identities = 17/55 (30%), Positives = 22/55 (40%) Frame = -3 Query: 342 PFPPTPLAAMAGDLRRSDGPYGRAGKATPAPDLSGDLGNGEARAECSRESEGERD 178 P P P A RR GP GR G+ + G A A+ E +G+ D Sbjct: 293 PPQPPPAGGSARRRRRGGGPPGRGGRRRGGKRRRAE-GTEAAAADAEEEEDGDGD 346
>PHC1_HUMAN (P78364) Polyhomeotic-like protein 1 (hPH1) (Early development| regulatory protein 1) Length = 1004 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 6/46 (13%) Frame = +1 Query: 100 QPCPNFPVQACSTSRPPRA------LADDHRAVPLSLALPTTLRTG 219 QP P+ PVQ T +P A LA AVP S +P T+++G Sbjct: 520 QPPPHIPVQVVGTRQPGTAQAQALGLAQLAAAVPTSRGMPGTVQSG 565
>OSS2_PEA (P17772) Organ-specific protein S2| Length = 181 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = -3 Query: 366 ESSGAIGEPFPPTPLAAMAGDLR-RSDGPYGRAGKATPAPDLSGDLGNGEARAECSRESE 190 E+ GAIGE F P P A+ GD ++ G +G+ P P++S G+ E A ++ + Sbjct: 88 ENMGAIGE-FEPRPNASAYGDNEIHANENKGASGEFEPRPNISA-YGDNEIHANENKGAI 145 Query: 189 GE 184 GE Sbjct: 146 GE 147 Score = 29.6 bits (65), Expect = 1.9 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = -3 Query: 366 ESSGAIGEPFPPTPLAAMAGDLR-RSDGPYGRAGKATPAPDLSGDLGNGEARAECSRESE 190 E+ GAIGE F P P A+ GD + G G+ P P+ S G+ E A ++ + Sbjct: 62 ENMGAIGE-FEPRPYASAYGDNEIHAKENMGAIGEFEPRPNASA-YGDNEIHANENKGAS 119 Query: 189 GE 184 GE Sbjct: 120 GE 121
>TRSF_DROVI (Q24761) Female-specific protein transformer| Length = 199 Score = 29.6 bits (65), Expect = 1.9 Identities = 28/93 (30%), Positives = 34/93 (36%), Gaps = 13/93 (13%) Frame = +1 Query: 121 VQACSTSRPPRA-------------LADDHRAVPLSLALPTTLRTGLSVPQIPAEVRGRG 261 + A S+SR PR AD+ R LP T P P E R R Sbjct: 1 MDADSSSRSPRDTRRRSRQREKMPYFADEVRERDRVRNLPKLKTTQKRTPTPPRERRSRH 60 Query: 262 RLPRSAVRTIASPEVACHGRQRRRRERLSDGAR 360 PRS RT + + C R R R G+R Sbjct: 61 ERPRSRSRTHSPEQSRCQRRLSRSYVRHRSGSR 93
>PDE4A_RAT (P54748) cAMP-specific 3',5'-cyclic phosphodiesterase 4A (EC| 3.1.4.17) (DPDE2) Length = 844 Score = 29.6 bits (65), Expect = 1.9 Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 1/75 (1%) Frame = -3 Query: 366 ESSGAIGEPFPP-TPLAAMAGDLRRSDGPYGRAGKATPAPDLSGDLGNGEARAECSRESE 190 ES A+G F P TP+ L S+ G G + A ++ + A CS S Sbjct: 763 ESMEAVGCSFSPGTPILPDVRTLSSSEEAPGLLGLPSTAAEVEAPRDHLAATRACSACSG 822 Query: 189 GERDGAVVISESSRW 145 D + +IS RW Sbjct: 823 TSGDNSAIISAPGRW 837
>MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [Contains: MAP1| light chain LC2] Length = 2774 Score = 29.6 bits (65), Expect = 1.9 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = -3 Query: 342 PFPPTPLAAMAGDLRRSDGPYGRAGKATPAPDLSGDLGNG--EARAECSRE 196 P P P A++ DL + P PAP L GDLG+G R EC+ E Sbjct: 2274 PLSPAPSASL--DLAPAPAP-----APAPAPGLPGDLGDGTLPCRPECTGE 2317
>SYNJ1_RAT (Q62910) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 29.6 bits (65), Expect = 1.9 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +2 Query: 230 PKSPLRSGAGVAFPARPYGPSLRLRSPAMAASGVGGNGSPMAP 358 P P+ A A P RP PS RSPA A GG G+P +P Sbjct: 1107 PPRPVAPPARPAPPQRPPPPS-GARSPAPARKEFGGVGAPPSP 1148
>SYNJ1_MOUSE (Q8CHC4) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 29.6 bits (65), Expect = 1.9 Identities = 19/43 (44%), Positives = 22/43 (51%) Frame = +2 Query: 230 PKSPLRSGAGVAFPARPYGPSLRLRSPAMAASGVGGNGSPMAP 358 P P+ A A P RP PS RSPA A GG G+P +P Sbjct: 1107 PPRPVAPPARPAPPQRPPPPS-GARSPAPARKEFGGVGAPPSP 1148
>PKHG4_HUMAN (Q58EX7) Puratrophin-1 (Pleckstrin homology domain-containing| family G member 4) (Purkinje cell atrophy-associated protein 1) Length = 1191 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/55 (34%), Positives = 23/55 (41%) Frame = -3 Query: 351 IGEPFPPTPLAAMAGDLRRSDGPYGRAGKATPAPDLSGDLGNGEARAECSRESEG 187 + +P PP P A D P R + PA D SGD G + S SEG Sbjct: 43 VKDPGPPRPPAGATQDEELQGSPLSRKFQLPPAADESGDAQRGTVESS-SVLSEG 96
>HMGN2_PIG (P80272) Nonhistone chromosomal protein HMG-17 (High-mobility group| nucleosome-binding domain-containing protein 2) Length = 89 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/55 (29%), Positives = 26/55 (47%) Frame = -3 Query: 342 PFPPTPLAAMAGDLRRSDGPYGRAGKATPAPDLSGDLGNGEARAECSRESEGERD 178 P P P A + P G+ GKA D + NG+A+ + ++++EG D Sbjct: 33 PPKPEPKPKKAPAKKGEKVPKGKKGKADAGKDGNNPAENGDAKTDQAQKAEGAGD 87
>HMGN2_GECJA (Q64FT8) Nonhistone chromosomal protein HMG-17 (High-mobility group| nucleosome-binding domain-containing protein 2) Length = 89 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/55 (29%), Positives = 26/55 (47%) Frame = -3 Query: 342 PFPPTPLAAMAGDLRRSDGPYGRAGKATPAPDLSGDLGNGEARAECSRESEGERD 178 P P P A + P G+ GKA D + NG+A+ + ++++EG D Sbjct: 33 PPKPEPKPKKAPAKKGEKVPKGKKGKADAGKDGNNPAENGDAKTDQAQKAEGAGD 87
>HMGN2_CHICK (P02314) Nonhistone chromosomal protein HMG-17 (High-mobility group| nucleosome-binding domain-containing protein 2) Length = 89 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/55 (27%), Positives = 26/55 (47%) Frame = -3 Query: 342 PFPPTPLAAMAGDLRRSDGPYGRAGKATPAPDLSGDLGNGEARAECSRESEGERD 178 P P P A + P G+ GKA + + NG+A+ + ++++EG D Sbjct: 33 PPKPEPKPKKAAPKKSEKVPKGKKGKADAGKEGNNPAENGDAKTDQAQKAEGAGD 87
>HMGN2_CANFA (Q711A6) Nonhistone chromosomal protein HMG-17 (High-mobility group| nucleosome-binding domain-containing protein 2) Length = 89 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/55 (29%), Positives = 26/55 (47%) Frame = -3 Query: 342 PFPPTPLAAMAGDLRRSDGPYGRAGKATPAPDLSGDLGNGEARAECSRESEGERD 178 P P P A + P G+ GKA D + NG+A+ + ++++EG D Sbjct: 33 PPKPEPKPKKAPAKKGEKVPKGKKGKADAGKDGNNPAENGDAKTDQAQKAEGAGD 87
>UL06_HHV11 (P10190) Virion protein UL6| Length = 676 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Frame = -3 Query: 342 PFPPTPLAAMAGDLRRSDGPYGRAGKATP------APDLSGDLGNGEARAECSR 199 P PP+P+ A D R P GR+ +P APD G +G+ + R + R Sbjct: 626 PPPPSPVGA---DFRPGASPRGRSRSRSPGRTARGAPDQGGGIGHRDGRRDGRR 676
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/42 (40%), Positives = 19/42 (45%) Frame = -2 Query: 334 ADAAGGHGRRPQAKRWSVRPSGEGDPGPGPQRGFGERRGPCG 209 A GG G RP ++ RP G G PG GF R G G Sbjct: 328 AGRPGGGGGRPGGGGFAGRPGGGGGGRPGGGGGFAGRPGGGG 369
>YBX2A_XENLA (P21574) Y-box-binding protein 2-A (Cytoplasmic RNA-binding protein| p56) (mRNP4) Length = 336 Score = 28.9 bits (63), Expect = 3.2 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%) Frame = -3 Query: 345 EPFPPTPLAAMAGD------LRRSDGPYGRAGKATPAPDLSGDLGNGEARAECSRESEGE 184 +P PT A +GD RR + R + PAP + + G+GEA+AE + E Sbjct: 206 DPVAPTSEALASGDDPQRPPPRRFRQRFRRPFRPRPAPQQTPEGGDGEAKAESGEDPRPE 265
>FGF5_RAT (P48807) Fibroblast growth factor 5 precursor (FGF-5) (HBGF-5)| Length = 266 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/60 (23%), Positives = 24/60 (40%) Frame = -3 Query: 348 GEPFPPTPLAAMAGDLRRSDGPYGRAGKATPAPDLSGDLGNGEARAECSRESEGERDGAV 169 G+P PP +G RS + + ++P G G+G + G R G++ Sbjct: 30 GQPAPPRNPGDSSGSRGRSSATFASSSASSPVAASPGSQGSGSEHSSFQWSPSGRRTGSL 89
>B2L13_MOUSE (P59017) Bcl-2-like 13 protein (Mil1 protein) (Bcl-rambo)| Length = 434 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = -3 Query: 276 RAGKATPAPDLSGDLGNGEARAECSRESEGER-DGAVVISESSRWARSRA 130 RA K +P P + +LG E A +R ER +GA +SE +R ++ Sbjct: 338 RAEKTSPTPSVFVELGEEELEAVTARPEAVERAEGAAQLSEERAGSRKKS 387
>WOX11_ARATH (Q6X7J3) WUSCHEL-related homeobox 11| Length = 268 Score = 28.9 bits (63), Expect = 3.2 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = -2 Query: 355 RHRRAVPADAAGGHGRRPQAKRWSVRP 275 RH R+ P+ A+G P RWS +P Sbjct: 12 RHSRSPPSSASGSTSAEPVRSRWSPKP 38
>FGF5_MOUSE (P15656) Fibroblast growth factor 5 precursor (FGF-5) (HBGF-5)| Length = 264 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/60 (23%), Positives = 24/60 (40%) Frame = -3 Query: 348 GEPFPPTPLAAMAGDLRRSDGPYGRAGKATPAPDLSGDLGNGEARAECSRESEGERDGAV 169 G+P PP +G RS + + ++P G G+G + G R G++ Sbjct: 30 GQPAPPRNPGDSSGSRGRSSATFSSSSASSPVAASPGSQGSGSEHSSFQWSPSGRRTGSL 89
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.9 bits (63), Expect = 3.2 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Frame = -3 Query: 360 SGAIGEPFPPTPLAAMAGDLRRSD-GPYGRAGKATP--APDLSGDLGN 226 SG G P PP P+ G R + GP GR G+ P P +G+ G+ Sbjct: 878 SGNAGPPGPPGPVGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGS 925
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.9 bits (63), Expect = 3.2 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Frame = -3 Query: 360 SGAIGEPFPPTPLAAMAGDLRRSD-GPYGRAGKATP--APDLSGDLGN 226 SG G P PP P+ G R + GP GR G+ P P +G+ G+ Sbjct: 878 SGNAGPPGPPGPVGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGS 925
>UBP8_HUMAN (P40818) Ubiquitin carboxyl-terminal hydrolase 8 (EC 3.1.2.15)| (Ubiquitin thioesterase 8) (Ubiquitin-specific processing protease 8) (Deubiquitinating enzyme 8) (hUBPy) Length = 1118 Score = 28.5 bits (62), Expect = 4.2 Identities = 18/51 (35%), Positives = 28/51 (54%) Frame = +1 Query: 187 SLALPTTLRTGLSVPQIPAEVRGRGRLPRSAVRTIASPEVACHGRQRRRRE 339 S A P+T T + PQIPAE R R P R+ +SP++ ++ +R+ Sbjct: 686 SSAPPSTPPTHKAKPQIPAE---RDREPSKLKRSYSSPDITQAIQEEEKRK 733
>STRN3_RAT (P58405) Striatin-3 (Cell-cycle autoantigen SG2NA) (S/G2 antigen)| (Fragment) Length = 461 Score = 28.5 bits (62), Expect = 4.2 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 1/43 (2%) Frame = +2 Query: 230 PKSPLRSGAGVAFPARPY-GPSLRLRSPAMAASGVGGNGSPMA 355 P+ G G+A P RP GP L P A GG G P A Sbjct: 19 PQQGRGGGQGMAVPPRPQQGPGGNLSLPPGANGAPGGGGPPAA 61
>COL40_CAEEL (P34804) Cuticle collagen 40| Length = 306 Score = 28.5 bits (62), Expect = 4.2 Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Frame = -3 Query: 360 SGAIGEPFPPTPLAAMAGDLRRSDGPYGRAGKATP--APDLSGDLG-NGEARA 211 +GA G P PP P GP G AG A P AP +G G GEA A Sbjct: 235 AGAAGPPGPPGPAGNPGSAGASEPGPAGPAGDAGPDGAPGNAGAPGAPGEAGA 287
>PABP2_MOUSE (Q8CCS6) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PolyA binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1) Length = 301 Score = 28.5 bits (62), Expect = 4.2 Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 4/42 (9%) Frame = -2 Query: 343 AVPADAAGGHGRRPQAKRWSVR----PSGEGDPGPGPQRGFG 230 A A AAGG G P +R V +GEGDPG G G Sbjct: 7 AAAAGAAGGRGSGPGRRRHLVPGAGGEAGEGDPGGAGDYGNG 48
>MRCKG_HUMAN (Q6DT37) Serine/threonine-protein kinase MRCK gamma (EC 2.7.11.1)| (CDC42-binding protein kinase gamma) (Myotonic dystrophy kinase-related CDC42-binding kinase gamma) (Myotonic dystrophy protein kinase-like alpha) (MRCK gamma) (DMPK-like gamma Length = 1551 Score = 28.5 bits (62), Expect = 4.2 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = +2 Query: 233 KSPLRSGAGVAFPARPYGPSLRLRSPA-MAASGVGGNGSPM 352 K + G+G P RP+ S LR PA M + G+GG+ PM Sbjct: 1468 KGRVARGSG---PQRPHSFSEALRRPASMGSEGLGGDADPM 1505
>DIDO1_MOUSE (Q8C9B9) Death-inducer obliterator 1 (DIO-1) (Death-associated| transcription factor 1) (DATF-1) (Fragments) Length = 1956 Score = 28.5 bits (62), Expect = 4.2 Identities = 15/50 (30%), Positives = 22/50 (44%) Frame = -2 Query: 358 GRHRRAVPADAAGGHGRRPQAKRWSVRPSGEGDPGPGPQRGFGERRGPCG 209 G + +P+ +G HG P + PS G P G F +R+ P G Sbjct: 1514 GAQKPPIPSLFSGQHGPPPYGDNRGLSPSYLGGPRGGAPAQFEDRKDPHG 1563
>MYB3_HORVU (P20027) Myb-related protein Hv33| Length = 302 Score = 28.5 bits (62), Expect = 4.2 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = -3 Query: 249 DLSGDLGNGEARAECSRESEGERDGAVVISESSRWARSRAGLDREIRARLH 97 D+S +LG GE+ + S + G G+V+ E WA++ R + H Sbjct: 222 DVSENLGYGESSSNSSNWNYGGEVGSVLDGEVPHWAKAEPAFAEMERQQQH 272
>OST6_MOUSE (Q5GFD5) Heparan sulfate glucosamine 3-O-sulfotransferase 6 (EC| 2.8.2.23) (Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 6) (Heparan sulfate 3-O-sulfotransferase 6) (3-OST-6) Length = 342 Score = 28.5 bits (62), Expect = 4.2 Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = +2 Query: 245 RSGAGVAFPARPYGPSLRLRSPAM-AASGVGGNGSPMA 355 R+ A V PA P SLRLR+P + ASG G P A Sbjct: 56 RAPAPVPAPAEPPHTSLRLRAPGLPVASGPGRRRFPQA 93
>MDC1_PIG (Q767L8) Mediator of DNA damage checkpoint protein 1| Length = 2042 Score = 28.5 bits (62), Expect = 4.2 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 4/66 (6%) Frame = +1 Query: 103 PCPNFPVQACSTSRP----PRALADDHRAVPLSLALPTTLRTGLSVPQIPAEVRGRGRLP 270 P + P+ + ST +P P + HR+ + L TG V P RGR Sbjct: 1353 PAASEPLPSASTDQPITPKPTSRGRAHRSSAKTPELQPPTSTGQPVTPRPTSQATRGRTH 1412 Query: 271 RSAVRT 288 RS+++T Sbjct: 1413 RSSIKT 1418
>CO5A1_MOUSE (O88207) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 28.5 bits (62), Expect = 4.2 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 5/58 (8%) Frame = -2 Query: 367 GVLGRHRRAVPADAAGGHGRR-PQAKRWSV----RPSGEGDPGPGPQRGFGERRGPCG 209 G+ G P AG G R P + RP +G PGP ++G +GP G Sbjct: 1072 GLKGSEGPPGPPGPAGSPGERGPAGSAGPIGIPGRPGPQGPPGPAGEKGLPGEKGPQG 1129
>ZN219_HUMAN (Q9P2Y4) Zinc finger protein 219| Length = 722 Score = 28.5 bits (62), Expect = 4.2 Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 4/73 (5%) Frame = -3 Query: 336 PPTPLAAMAGDLRRSDG-PYGRAGKATPAPDLSG--DLGNG-EARAECSRESEGERDGAV 169 PP+ L ++ LR +G P G + P G L + ARA R E E + V Sbjct: 375 PPSLLGYLS--LRAGEGRPNGEGAEPGPGRSFGGFRPLSSALPARARRHRAEEPEEEEEV 432 Query: 168 VISESSRWARSRA 130 V +E WAR R+ Sbjct: 433 VEAEEETWARGRS 445
>EL5_ORYSA (Q9LRB7) E3 ubiquitin ligase EL5 (EC 6.3.2.-)| Length = 325 Score = 28.5 bits (62), Expect = 4.2 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = -2 Query: 349 RRAVPADAAGGHGRRPQAKRWSVRPSGEGDPGPG 248 RRAV + G GRRP+ +R R GD G G Sbjct: 66 RRAVTTTSTSGRGRRPRPRR---RSGSGGDGGTG 96
>THIC_BACCR (Q815D5) Thiamine biosynthesis protein thiC| Length = 586 Score = 28.1 bits (61), Expect = 5.5 Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Frame = -3 Query: 366 ESSGAIGEPFPPTPLAAMAGDLRRSDGPYG-RAGKATPAPDLSGDLGNGEARAECSRESE 190 E S G P PP + +G +D Y K P P S LG G+ A RE + Sbjct: 39 EQSETNGVPNPPIRVYDTSGPY--TDPEYKVELEKGIPTPRHSWILGRGDVEAYEGREVK 96 Query: 189 GERDGAVVISE 157 E DG V S+ Sbjct: 97 PEDDGVKVASK 107
>SFRIP_HUMAN (Q99590) SFRS2-interacting protein (Splicing factor,| arginine/serine-rich 2-interacting protein) (SC35-interacting protein 1) (CTD-associated SR protein 11) (Splicing regulatory protein 129) (SRrp129) (NY-REN-40 antigen) Length = 1148 Score = 28.1 bits (61), Expect = 5.5 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Frame = -3 Query: 237 DLGNGEARAECSRESEGERDGAVVISE--SSRWARSRAGLDREIRARLHWNSSS 82 D GE SRE E +RDG E + +W+RSR+ R R SSS Sbjct: 585 DSSPGEKSRSQSRERESDRDGQRRERERRTRKWSRSRSHSRSPSRCRTKSKSSS 638
>IRK5_MOUSE (P48545) G protein-activated inward rectifier potassium channel 4| (GIRK4) (Potassium channel, inwardly rectifying subfamily J member 5) (Inward rectifier K(+) channel Kir3.4) (Heart KATP channel) (KATP-1) (Cardiac inward rectifier) (CIR) Length = 419 Score = 28.1 bits (61), Expect = 5.5 Identities = 18/62 (29%), Positives = 32/62 (51%) Frame = -3 Query: 333 PTPLAAMAGDLRRSDGPYGRAGKATPAPDLSGDLGNGEARAECSRESEGERDGAVVISES 154 P+ A +++RS GR + P+P L G AE ++ EGE +G + +S++ Sbjct: 360 PSCCAKELAEMKRS----GRLLQYLPSPPLLGGCAEAGNEAEAEKDEEGEPNG-LSVSQA 414 Query: 153 SR 148 +R Sbjct: 415 TR 416
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = -2 Query: 304 PQAKRWSVRPSGEGDPGPGPQRGFGERRGP 215 P+ +R + RP G G P PGP +G G R GP Sbjct: 189 PERERPAARP-GPGGPRPGPAQG-GPRPGP 216
>ATKB_ENTFA (Q8KU73) Potassium-transporting ATPase B chain (EC 3.6.3.12)| (Potassium-translocating ATPase B chain) (ATP phosphohydrolase [potassium-transporting] B chain) (Potassium-binding and translocating subunit B) Length = 676 Score = 28.1 bits (61), Expect = 5.5 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 14/66 (21%) Frame = -3 Query: 312 AGDLRRSDGPYGRAGKATPAPDLSGDLGNGEARAECS----------RESEGERD----G 175 + DL+R+D Y RAG+ PA GD+ G A + S RES G+R G Sbjct: 112 SSDLKRNDLVYVRAGEQIPA---DGDVIEGAASVDESAITGESAPVIRESGGDRSAVTGG 168 Query: 174 AVVISE 157 V+S+ Sbjct: 169 TTVVSD 174
>DHR25_ORYSA (P30287) Dehydrin Rab25 (Drought-resistant protein 1) (rDRP1)| Length = 228 Score = 28.1 bits (61), Expect = 5.5 Identities = 23/69 (33%), Positives = 25/69 (36%), Gaps = 7/69 (10%) Frame = -3 Query: 348 GEPFP--PTPLAAMAG-----DLRRSDGPYGRAGKATPAPDLSGDLGNGEARAECSRESE 190 G P P P P AG D S G YG AG P P S + A A Sbjct: 30 GNPVPDEPAPRDTAAGYVAPPDPAVSTGDYGLAGAEAPHPHESAVMSGAAAAAVAPGGEA 89 Query: 189 GERDGAVVI 163 RDG V+ Sbjct: 90 YTRDGGGVV 98
>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 28.1 bits (61), Expect = 5.5 Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 5/58 (8%) Frame = -2 Query: 367 GVLGRHRRAVPADAAGGHGRRPQAKRWSV-----RPSGEGDPGPGPQRGFGERRGPCG 209 G+ G A P AG G R A RP +G PG ++G +GP G Sbjct: 1000 GLKGNEGPAGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIG 1057
>EP15R_HUMAN (Q9UBC2) Epidermal growth factor receptor substrate 15-like 1| (Eps15-related protein) (Eps15R) Length = 864 Score = 28.1 bits (61), Expect = 5.5 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -3 Query: 267 KATPAPDLSGDLGNGEARAECSRESEGERDGAVVISESSRWARSRAGLDREIRAR 103 + TP PD SG LG+G E G ++ + E ++ R + L+++IR + Sbjct: 364 RGTPGPDSSGSLGSG--------EFTGVKELDDISQEIAQLQREKYSLEQDIREK 410
>PGCA_MOUSE (Q61282) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2132 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Frame = -3 Query: 273 AGKATPAPDLSGDL-GNGEARAECSRESEGERDGAV 169 +G+A+ APDLSGD G+G+A +S G+ G + Sbjct: 810 SGEASGAPDLSGDFTGSGDASGRL--DSSGQPSGGI 843
>PNRC1_HUMAN (Q12796) Proline-rich nuclear receptor coactivator 1 (Proline-rich| protein 2) (B4-2 protein) Length = 327 Score = 28.1 bits (61), Expect = 5.5 Identities = 20/72 (27%), Positives = 33/72 (45%) Frame = +1 Query: 133 STSRPPRALADDHRAVPLSLALPTTLRTGLSVPQIPAEVRGRGRLPRSAVRTIASPEVAC 312 +T+ PP D RA+P +L LP L G P + + R LP ++ A Sbjct: 36 TTAPPPLPRIPDPRALPPTLFLPHFL--GGDGPCLTPQPRAPAALPNRSLAVAGGTPRAA 93 Query: 313 HGRQRRRRERLS 348 ++R+++ R S Sbjct: 94 PKKRRKKKVRAS 105
>CO1A2_CHICK (P02467) Collagen alpha-2(I) chain precursor (Fragments)| Length = 1362 Score = 27.7 bits (60), Expect = 7.1 Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 6/49 (12%) Frame = -2 Query: 337 PADAAGGHGRRPQAKRWSVRPSGEGDPGP----GPQRGFGER--RGPCG 209 P+ A G G Q S +P GDPGP GP FG R GP G Sbjct: 954 PSGALGAPGPHGQVGP-SGKPGNRGDPGPVGPVGPAGAFGPRGLAGPQG 1001
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 27.7 bits (60), Expect = 7.1 Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = -2 Query: 313 GRRPQ-AKRWSV-RPSGEGDPGPGPQRGFGERRGPCG 209 GR P+ AKR RPS G P GP G G GP G Sbjct: 503 GRHPEDAKRQPRGRPSSSGTPRDGPAGGTGGSGGPGG 539
>C1QT5_HUMAN (Q9BXJ0) Complement C1q tumor necrosis factor-related protein 5| precursor Length = 243 Score = 27.7 bits (60), Expect = 7.1 Identities = 18/53 (33%), Positives = 23/53 (43%) Frame = -2 Query: 367 GVLGRHRRAVPADAAGGHGRRPQAKRWSVRPSGEGDPGPGPQRGFGERRGPCG 209 G+ GR R A G G + + R + P GDPGP + G GP G Sbjct: 45 GLPGRDGRDGRDGAPGAPGEKGEGGRPGL-PGPRGDPGPRGEAGPAGPTGPAG 96
>SYNE1_HUMAN (Q8NF91) Nesprin-1 (Nuclear envelope spectrin repeat protein 1)| (Synaptic nuclear envelope protein 1) (Syne-1) (Myocyte nuclear envelope protein 1) (Myne-1) (Enaptin) Length = 8797 Score = 27.7 bits (60), Expect = 7.1 Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 12/97 (12%) Frame = -3 Query: 363 SSGAIGEPFPPTPLAAMAGDLRRSDGPYGRAGKATPAP------------DLSGDLGNGE 220 S+ ++ P P + L+ RS+ R+G+ TPA DLS DL + Sbjct: 8244 SADSLLSPQPSSNLSLSLAQPLRSE----RSGRDTPASVDSIPLEWDHDYDLSRDLESAM 8299 Query: 219 ARAECSRESEGERDGAVVISESSRWARSRAGLDREIR 109 +RA S + EG+ D + + + + L+ +IR Sbjct: 8300 SRALPSEDEEGQDDKDFYLRGAVALSGDHSALESQIR 8336
>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2161 Score = 27.7 bits (60), Expect = 7.1 Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = -2 Query: 313 GRRPQ-AKRWSV-RPSGEGDPGPGPQRGFGERRGPCG 209 GR P+ AKR RPS G P GP G G GP G Sbjct: 503 GRHPEDAKRQPRGRPSSSGTPREGPAGGTGGSGGPGG 539
>HMGN2_HUMAN (P05204) Nonhistone chromosomal protein HMG-17 (High-mobility group| nucleosome-binding domain-containing protein 2) Length = 89 Score = 27.7 bits (60), Expect = 7.1 Identities = 15/55 (27%), Positives = 26/55 (47%) Frame = -3 Query: 342 PFPPTPLAAMAGDLRRSDGPYGRAGKATPAPDLSGDLGNGEARAECSRESEGERD 178 P P P A + P G+ GKA + + NG+A+ + ++++EG D Sbjct: 33 PPKPEPKPKKAPAKKGEKVPKGKKGKADAGKEGNNPAENGDAKTDQAQKAEGAGD 87
>S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (GEF) (Huntington| disease gene regulatory region-binding protein 1) (HDBP-1) Length = 387 Score = 27.7 bits (60), Expect = 7.1 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Frame = -3 Query: 333 PTPLAAMAGDLRRSDGPYGRAGKAT-PAPDLSGDLGNGEARAECSRESEGERDGAVVISE 157 P+ L A A LR ++GP RA T P P +G G A E +R E E A + Sbjct: 13 PSALRAEAPWLR-AEGPGPRAAPVTVPTPPQGSSVGGGFAGLEFARPQESE-PRASDLGA 70 Query: 156 SSRWARSRAG 127 W + AG Sbjct: 71 PRTWTGAAAG 80
>COL8_CAEEL (P18833) Cuticle collagen 8 precursor| Length = 282 Score = 27.7 bits (60), Expect = 7.1 Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 5/58 (8%) Frame = -2 Query: 367 GVLGRHRRAVPADAAGGHGR-----RPQAKRWSVRPSGEGDPGPGPQRGFGERRGPCG 209 G GRH P GG G RP A P G+PG + G R GP G Sbjct: 159 GDQGRHGPPGPTGGQGGPGEQGDAGRPGAAGCPGPPGPRGEPGTEYRPGQAGRAGPPG 216
>CO5A1_CRILO (Q60467) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 27.7 bits (60), Expect = 7.1 Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 5/58 (8%) Frame = -2 Query: 367 GVLGRHRRAVPADAAGGHGRRPQAKRWSV-----RPSGEGDPGPGPQRGFGERRGPCG 209 G+ G P AG G R A RP +G PGP ++G +GP G Sbjct: 1074 GLKGSEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGVPGEKGPQG 1131
>DDX43_HUMAN (Q9NXZ2) Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)| (DEAD box protein 43) (DEAD box protein HAGE) (Helical antigen) Length = 648 Score = 27.7 bits (60), Expect = 7.1 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = +1 Query: 136 TSRPPRALADDHRAVPLSLAL 198 TSRPP A+A H +PL AL Sbjct: 54 TSRPPEAVAAGHEELPLCFAL 74
>IF2_SYNY3 (P72689) Translation initiation factor IF-2| Length = 1001 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 4/36 (11%) Frame = -3 Query: 345 EPFPPTPLAAMAGDLRRSDGPYGRAGK----ATPAP 250 +P PPTP A A R GP GR A PAP Sbjct: 165 KPAPPTPPAKKAAPAPRLAGPPGRTASPNKTAVPAP 200
>FOXD2_MOUSE (O35392) Forkhead box protein D2 (Mesoderm/mesenchyme forkhead 2)| (MF-2) Length = 492 Score = 27.7 bits (60), Expect = 7.1 Identities = 17/40 (42%), Positives = 18/40 (45%) Frame = -2 Query: 334 ADAAGGHGRRPQAKRWSVRPSGEGDPGPGPQRGFGERRGP 215 A AAG G QA R + P PGPGP G R P Sbjct: 91 AAAAGSPGPGVQAARGATGPG----PGPGPPSGGAATRSP 126
>NFM_HUMAN (P07197) Neurofilament triplet M protein (160 kDa neurofilament| protein) (Neurofilament medium polypeptide) (NF-M) (Neurofilament 3) Length = 915 Score = 27.7 bits (60), Expect = 7.1 Identities = 18/80 (22%), Positives = 33/80 (41%) Frame = +1 Query: 103 PCPNFPVQACSTSRPPRALADDHRAVPLSLALPTTLRTGLSVPQIPAEVRGRGRLPRSAV 282 P P PV+ S P++ ++ P+ + P + V + P E + + +P+S V Sbjct: 628 PVPKSPVEEKGKSPVPKSPVEEKGKSPVPKS-PVEEKGKSPVSKSPVEEKAKSPVPKSPV 686 Query: 283 RTIASPEVACHGRQRRRRER 342 S G Q+ E+ Sbjct: 687 EEAKSKAEVGKGEQKEEEEK 706
>CO5A1_HUMAN (P20908) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 27.7 bits (60), Expect = 7.1 Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 5/58 (8%) Frame = -2 Query: 367 GVLGRHRRAVPADAAGGHGRRPQAKRWSV-----RPSGEGDPGPGPQRGFGERRGPCG 209 G+ G P AG G R A RP +G PGP ++G +GP G Sbjct: 1072 GLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQG 1129
>E2F3_HUMAN (O00716) Transcription factor E2F3 (E2F-3)| Length = 465 Score = 27.3 bits (59), Expect = 9.3 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 4/38 (10%) Frame = +2 Query: 254 AGVAFPARPYGPSLRL----RSPAMAASGVGGNGSPMA 355 AG P+GPS R + PA+ G GG G P A Sbjct: 95 AGSLLYTTPHGPSSRAGLLQQPPALGRGGSGGGGGPPA 132
>GSK3A_HUMAN (P49840) Glycogen synthase kinase-3 alpha (EC 2.7.11.26) (GSK-3| alpha) Length = 483 Score = 27.3 bits (59), Expect = 9.3 Identities = 24/74 (32%), Positives = 27/74 (36%) Frame = -2 Query: 328 AAGGHGRRPQAKRWSVRPSGEGDPGPGPQRGFGERRGPCGV*SXXXXXXXXXXXXXXELA 149 + GG G +A+ S G G G G G G GP G Sbjct: 7 SGGGPGGSGRARTSSFAEPGGGGGGGGGGPG-GSASGPGGTGGGKASVGAMGG------G 59 Query: 148 VGAKSSRPGPGNSG 107 VGA SS GPG SG Sbjct: 60 VGASSSGGGPGGSG 73
>ARI1A_HUMAN (O14497) AT-rich interactive domain-containing protein 1A (ARID| domain-containing protein 1A) (SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin subfamily F member 1) (SWI-SNF complex protein p270) (B120) (SWI-like pr Length = 2285 Score = 27.3 bits (59), Expect = 9.3 Identities = 17/63 (26%), Positives = 27/63 (42%) Frame = -3 Query: 363 SSGAIGEPFPPTPLAAMAGDLRRSDGPYGRAGKATPAPDLSGDLGNGEARAECSRESEGE 184 ++ ++G P PP P + ++ + G A A A GE +A +ESEG Sbjct: 9 AASSLGNPPPPPPSELKKAEQQQREEAGGEAAAAAAAE-------RGEMKAAAGQESEGP 61 Query: 183 RDG 175 G Sbjct: 62 AVG 64
>TTC15_HUMAN (Q8WVT3) Tetratricopeptide repeat protein 15 (TPR repeat protein| 15) Length = 735 Score = 27.3 bits (59), Expect = 9.3 Identities = 17/59 (28%), Positives = 21/59 (35%), Gaps = 3/59 (5%) Frame = -2 Query: 292 RWSVRPSGEGDPGP---GPQRGFGERRGPCGV*SXXXXXXXXXXXXXXELAVGAKSSRP 125 R P GEGDPGP G GE G C G++++RP Sbjct: 89 RDEAEPGGEGDPGPEPAGTPSPSGEADGDCAPEDAAPSSGGAPRQDAAREVPGSEAARP 147
>STRN3_MOUSE (Q9ERG2) Striatin-3 (Cell-cycle autoantigen SG2NA) (S/G2 antigen)| Length = 796 Score = 27.3 bits (59), Expect = 9.3 Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 1/36 (2%) Frame = +2 Query: 251 GAGVAFPARPY-GPSLRLRSPAMAASGVGGNGSPMA 355 G G+A P RP GP L P A GG G P A Sbjct: 11 GQGMAAPPRPQQGPGGNLSLPPGANGAPGGGGPPAA 46
>STAR8_HUMAN (Q92502) StAR-related lipid transfer protein 8 (StARD8) (START| domain-containing protein 8) Length = 1023 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = +1 Query: 220 LSVPQIPAEVRGRGRLPRSAVRTIASPEVACHGRQRRRRER 342 +S+P PA++ GR P S+ R + SP G Q + ++R Sbjct: 83 VSLPPEPADLPLPGRAPSSSDRPLLSPTQGQEGPQDKAKKR 123
>CU070_HUMAN (Q9NSI2) Protein C21orf70| Length = 230 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = -2 Query: 313 GRRPQAKRWSVRPSGEGDPGPGP 245 G R + + +VRP GE PGP P Sbjct: 6 GLRARVHQAAVRPKGEAAPGPAP 28
>HMGN2_RAT (P18437) Nonhistone chromosomal protein HMG-17 (High-mobility group| nucleosome-binding domain-containing protein 2) Length = 89 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/55 (25%), Positives = 26/55 (47%) Frame = -3 Query: 342 PFPPTPLAAMAGDLRRSDGPYGRAGKATPAPDLSGDLGNGEARAECSRESEGERD 178 P P P A + P G+ GKA D + +G+A+ + +++++G D Sbjct: 33 PPKPEPKPKKAPAKKGEKVPKGKKGKADAGKDANNPAEDGDAKTDQAQKADGAGD 87
>Y007_MYCTU (P71575) Hypothetical protein Rv0007/MT0007| Length = 304 Score = 27.3 bits (59), Expect = 9.3 Identities = 22/64 (34%), Positives = 30/64 (46%) Frame = -3 Query: 330 TPLAAMAGDLRRSDGPYGRAGKATPAPDLSGDLGNGEARAECSRESEGERDGAVVISESS 151 +P A A +L GP RA + PAP + G G +R + + S G R I+ S Sbjct: 117 SPAEAYASELPDLSGPTPRAPQRNPAPARPAEGGAG-SRGDSAAGSSGGRS----ITAES 171 Query: 150 RWAR 139 R AR Sbjct: 172 RDAR 175
>RHG08_HUMAN (Q9NSG0) Rho-GTPase-activating protein 8| Length = 718 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +1 Query: 172 RAVPLSLALPTTLRTGLSVPQIP 240 RA PL A+P T TGL+ P +P Sbjct: 685 RAAPLQEAVPRTQATGLTKPTLP 707
>IGA1_STRSA (Q59986) Immunoglobulin A1 protease precursor (EC 3.4.24.13) (IgA1| protease) (IgA-specific zinc metalloproteinase) Length = 1854 Score = 27.3 bits (59), Expect = 9.3 Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 3/71 (4%) Frame = -3 Query: 360 SGAIGEPFPPTPLAAMAGDLRRSDGPYGRAGKATPAPDLSGDLGNGEARAE---CSRESE 190 SGAI EP TPL G G + + TP P+ +G E S E Sbjct: 443 SGAIVEPAQVTPLPEYTG---VQSGAIVKPAQVTPLPEYTGTQSGAIVEPEQVTPSPEYT 499 Query: 189 GERDGAVVISE 157 G + GA+V E Sbjct: 500 GVQAGAIVEPE 510
>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor| Length = 1356 Score = 27.3 bits (59), Expect = 9.3 Identities = 20/54 (37%), Positives = 23/54 (42%) Frame = -2 Query: 367 GVLGRHRRAVPADAAGGHGRRPQAKRWSVRPSGEGDPGPGPQRGFGERRGPCGV 206 G GR PA AG G A + R GDPGPG +G GP G+ Sbjct: 784 GAAGRVGGPGPAGIAGPPGSAGPAGKDGPRGL-RGDPGPGGPQGEQGVVGPAGI 836
>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor| Length = 1364 Score = 27.3 bits (59), Expect = 9.3 Identities = 18/44 (40%), Positives = 22/44 (50%) Frame = -3 Query: 357 GAIGEPFPPTPLAAMAGDLRRSDGPYGRAGKATPAPDLSGDLGN 226 GA+G+P PP P R S G G AG P P L G+ G+ Sbjct: 362 GAVGQPGPPGPSGEEG--KRGSTGEIGPAGPPGP-PGLRGNPGS 402
>PHC1_MOUSE (Q64028) Polyhomeotic-like protein 1 (mPH1) (Early development| regulatory protein 1) (RAE-28) Length = 1012 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +1 Query: 100 QPCPNFPVQACSTSRPPRALADDHRAVPLSLALPT 204 QP P+ PVQ T +P A A L+ A+PT Sbjct: 527 QPPPHIPVQVVGTRQPGSAQAQALGLAQLAAAVPT 561
>PABP2_HUMAN (Q86U42) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PolyA binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1) Length = 305 Score = 27.3 bits (59), Expect = 9.3 Identities = 16/39 (41%), Positives = 19/39 (48%) Frame = -2 Query: 343 AVPADAAGGHGRRPQAKRWSVRPSGEGDPGPGPQRGFGE 227 A A AAGG G P +R V P G+ G G G G+ Sbjct: 7 AAAAGAAGGRGSGPGRRRHLV-PGAGGEAGEGAPGGAGD 44
>PABP2_BOVIN (Q28165) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PolyA-binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1) Length = 305 Score = 27.3 bits (59), Expect = 9.3 Identities = 16/39 (41%), Positives = 19/39 (48%) Frame = -2 Query: 343 AVPADAAGGHGRRPQAKRWSVRPSGEGDPGPGPQRGFGE 227 A A AAGG G P +R V P G+ G G G G+ Sbjct: 7 AAAAGAAGGRGSGPGRRRHLV-PGAGGEAGEGAPGGAGD 44
>HSP1_MURBR (P83211) Sperm protamine P1 precursor| Length = 107 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +1 Query: 268 PRSAVRTIASPEVACHGRQRRRRERLSDGARG 363 PR A R E HGR+RRRR + A+G Sbjct: 19 PREAKRYKEEEEFPGHGRRRRRRSKGKGKAKG 50
>ELK1_HUMAN (P19419) ETS domain-containing protein Elk-1| Length = 428 Score = 27.3 bits (59), Expect = 9.3 Identities = 16/50 (32%), Positives = 21/50 (42%) Frame = -2 Query: 367 GVLGRHRRAVPADAAGGHGRRPQAKRWSVRPSGEGDPGPGPQRGFGERRG 218 G G H + P + GR+P+ + PS G PGP G G G Sbjct: 295 GQAGGHAASSPEISQPQKGRKPRDLELPLSPSLLGGPGPERTPGSGSGSG 344
>RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C (Hrb27-C)| (hnRNP 48) (HRP48.1) Length = 421 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -2 Query: 319 GHGRRPQAKRWSVRPSGEGDPGPGPQRGFGERRGPCG 209 G G PQ +++ G G+ GPG +G+G GP G Sbjct: 238 GWGTSPQQQQY-----GYGNSGPGSYQGWGAPPGPQG 269
>PO4F1_MOUSE (P17208) POU domain, class 4, transcription factor 1| (Brain-specific homeobox/POU domain protein 3A) (Brn-3A) (Brn-3.0) Length = 421 Score = 27.3 bits (59), Expect = 9.3 Identities = 17/42 (40%), Positives = 17/42 (40%) Frame = -2 Query: 334 ADAAGGHGRRPQAKRWSVRPSGEGDPGPGPQRGFGERRGPCG 209 A AAGG G P G G PG G G G GP G Sbjct: 134 AGAAGGGGGAHDGPGGGGGPGGGGGPGGGGPGGGGGGGGPGG 175
>NFL_XENLA (P35616) Neurofilament triplet L protein (Neurofilament light| polypeptide) (NF-L) Length = 543 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = -3 Query: 240 GDLGNGEARAECSRESEGERDGAVVISESS 151 G+ G GEA AE E EGE G E S Sbjct: 507 GEEGEGEAEAEGDGEEEGESKGDEAAEEES 536
>CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodpasture antigen)| Length = 1670 Score = 27.3 bits (59), Expect = 9.3 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = -3 Query: 363 SSGAIGEPFPPTPLAAMAGDLRRSDGPYGRAGKATPAPDLSGDLG 229 S G+ G P PP P + ++ G G G P P +GD+G Sbjct: 1246 SRGSPGAPGPPGPPGSHVIGIKGDKGSMGHPGPKGP-PGTAGDMG 1289
>CF136_HUMAN (Q5SQH8) Protein C6orf136| Length = 315 Score = 27.3 bits (59), Expect = 9.3 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = -2 Query: 289 WSVRPSGEGDPGPGPQ 242 W V P G+G+ GPGP+ Sbjct: 83 WVVLPPGKGEEGPGPE 98 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,469,622 Number of Sequences: 219361 Number of extensions: 911913 Number of successful extensions: 4897 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 4073 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4869 length of database: 80,573,946 effective HSP length: 98 effective length of database: 59,076,568 effective search space used: 1417837632 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
