| Clone Name | bast12d10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_507360.1| PREDICTED Oryza sativa (japonica cultivar-group), P0492E07.108 mRNA Length = 1297 Score = 214 bits (108), Expect = 1e-52 Identities = 237/279 (84%), Gaps = 7/279 (2%) Strand = Plus / Plus Query: 56 cgtgctctaggttttggggatggaggccgagacggcggcgaagagggcgcgggagagcga 115 ||||||||||||| | || |||||||||||| ||||||||||||||||||||||||||| Sbjct: 119 cgtgctctaggttctcgg-atggaggccgaggcggcggcgaagagggcgcgggagagcgg 177 Query: 116 tggcgctgcggcggcggcggacggagccgttgagcaggcggggatctccgccgtcatccc 175 || ||| |||||||| ||| |||| ||||||||||| ||||| ||||||||||| Sbjct: 178 tgacgcggcggcggc------cggtgccggcgagcaggcgggtatctctgccgtcatccc 231 Query: 176 cgggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtgga 235 || |||||||||||||| |||||||||||||| || ||||||||||| ||||||| || Sbjct: 232 tggatggttctccgagattagccccatgtggcctggtgaggcacactcattgaaggtcga 291 Query: 236 gaaggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtcctccac 295 ||||| || |||||||| ||||| ||||||||| ||||| |||| || ||||||||||| Sbjct: 292 aaaggtactattccaaggaaagtcggactaccaaaatgtgatggtgtttcagtcctccac 351 Query: 296 ctacgggaaggtgctcgtcctgtatggggtgatccaggt 334 ||||| |||||||| || ||| |||| ||||| ||||| Sbjct: 352 gtacggcaaggtgcttgtgctggatggagtgattcaggt 390
>ref|XM_506281.2| PREDICTED Oryza sativa (japonica cultivar-group), P0492E07.108 mRNA Length = 1346 Score = 214 bits (108), Expect = 1e-52 Identities = 237/279 (84%), Gaps = 7/279 (2%) Strand = Plus / Plus Query: 56 cgtgctctaggttttggggatggaggccgagacggcggcgaagagggcgcgggagagcga 115 ||||||||||||| | || |||||||||||| ||||||||||||||||||||||||||| Sbjct: 120 cgtgctctaggttctcgg-atggaggccgaggcggcggcgaagagggcgcgggagagcgg 178 Query: 116 tggcgctgcggcggcggcggacggagccgttgagcaggcggggatctccgccgtcatccc 175 || ||| |||||||| ||| |||| ||||||||||| ||||| ||||||||||| Sbjct: 179 tgacgcggcggcggc------cggtgccggcgagcaggcgggtatctctgccgtcatccc 232 Query: 176 cgggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtgga 235 || |||||||||||||| |||||||||||||| || ||||||||||| ||||||| || Sbjct: 233 tggatggttctccgagattagccccatgtggcctggtgaggcacactcattgaaggtcga 292 Query: 236 gaaggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtcctccac 295 ||||| || |||||||| ||||| ||||||||| ||||| |||| || ||||||||||| Sbjct: 293 aaaggtactattccaaggaaagtcggactaccaaaatgtgatggtgtttcagtcctccac 352 Query: 296 ctacgggaaggtgctcgtcctgtatggggtgatccaggt 334 ||||| |||||||| || ||| |||| ||||| ||||| Sbjct: 353 gtacggcaaggtgcttgtgctggatggagtgattcaggt 391
>dbj|AK099606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048E04, full insert sequence Length = 1346 Score = 214 bits (108), Expect = 1e-52 Identities = 237/279 (84%), Gaps = 7/279 (2%) Strand = Plus / Plus Query: 56 cgtgctctaggttttggggatggaggccgagacggcggcgaagagggcgcgggagagcga 115 ||||||||||||| | || |||||||||||| ||||||||||||||||||||||||||| Sbjct: 120 cgtgctctaggttctcgg-atggaggccgaggcggcggcgaagagggcgcgggagagcgg 178 Query: 116 tggcgctgcggcggcggcggacggagccgttgagcaggcggggatctccgccgtcatccc 175 || ||| |||||||| ||| |||| ||||||||||| ||||| ||||||||||| Sbjct: 179 tgacgcggcggcggc------cggtgccggcgagcaggcgggtatctctgccgtcatccc 232 Query: 176 cgggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtgga 235 || |||||||||||||| |||||||||||||| || ||||||||||| ||||||| || Sbjct: 233 tggatggttctccgagattagccccatgtggcctggtgaggcacactcattgaaggtcga 292 Query: 236 gaaggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtcctccac 295 ||||| || |||||||| ||||| ||||||||| ||||| |||| || ||||||||||| Sbjct: 293 aaaggtactattccaaggaaagtcggactaccaaaatgtgatggtgtttcagtcctccac 352 Query: 296 ctacgggaaggtgctcgtcctgtatggggtgatccaggt 334 ||||| |||||||| || ||| |||| ||||| ||||| Sbjct: 353 gtacggcaaggtgcttgtgctggatggagtgattcaggt 391
>dbj|AK060916.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G07, full insert sequence Length = 1297 Score = 214 bits (108), Expect = 1e-52 Identities = 237/279 (84%), Gaps = 7/279 (2%) Strand = Plus / Plus Query: 56 cgtgctctaggttttggggatggaggccgagacggcggcgaagagggcgcgggagagcga 115 ||||||||||||| | || |||||||||||| ||||||||||||||||||||||||||| Sbjct: 119 cgtgctctaggttctcgg-atggaggccgaggcggcggcgaagagggcgcgggagagcgg 177 Query: 116 tggcgctgcggcggcggcggacggagccgttgagcaggcggggatctccgccgtcatccc 175 || ||| |||||||| ||| |||| ||||||||||| ||||| ||||||||||| Sbjct: 178 tgacgcggcggcggc------cggtgccggcgagcaggcgggtatctctgccgtcatccc 231 Query: 176 cgggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtgga 235 || |||||||||||||| |||||||||||||| || ||||||||||| ||||||| || Sbjct: 232 tggatggttctccgagattagccccatgtggcctggtgaggcacactcattgaaggtcga 291 Query: 236 gaaggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtcctccac 295 ||||| || |||||||| ||||| ||||||||| ||||| |||| || ||||||||||| Sbjct: 292 aaaggtactattccaaggaaagtcggactaccaaaatgtgatggtgtttcagtcctccac 351 Query: 296 ctacgggaaggtgctcgtcctgtatggggtgatccaggt 334 ||||| |||||||| || ||| |||| ||||| ||||| Sbjct: 352 gtacggcaaggtgcttgtgctggatggagtgattcaggt 390
>emb|AJ251298.1|OSA251298 Oryza sativa mRNA for spermidine synthase 1 (spdSyn1 gene) Length = 1308 Score = 206 bits (104), Expect = 3e-50 Identities = 236/279 (84%), Gaps = 7/279 (2%) Strand = Plus / Plus Query: 56 cgtgctctaggttttggggatggaggccgagacggcggcgaagagggcgcgggagagcga 115 ||||||||||||| | || |||||||||||| ||||||||||||||||||||||||||| Sbjct: 82 cgtgctctaggttctcgg-atggaggccgaggcggcggcgaagagggcgcgggagagcgg 140 Query: 116 tggcgctgcggcggcggcggacggagccgttgagcaggcggggatctccgccgtcatccc 175 || ||| |||||||| ||| |||| ||||||||||| ||||| ||||||||||| Sbjct: 141 tgacgcggcggcggc------cggtgccggcgagcaggcgggtatctctgccgtcatccc 194 Query: 176 cgggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtgga 235 || |||||||||||||| |||||||||||||| || ||||||||||| ||||||| || Sbjct: 195 tggatggttctccgagattagccccatgtggcctggtgaggcacactcattgaaggtcga 254 Query: 236 gaaggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtcctccac 295 ||||| || |||||||| ||||| ||||||||| ||||| |||| || ||||||||||| Sbjct: 255 aaaggtactattccaaggaaagtcggactaccaaaatgtgatggtgtttcagtcctccac 314 Query: 296 ctacgggaaggtgctcgtcctgtatggggtgatccaggt 334 ||||| ||||| || || ||| |||| ||||| ||||| Sbjct: 315 gtacggcaaggttcttgtgctggatggagtgattcaggt 353
>gb|BT024141.1| Zea mays clone EL01N0442H12 mRNA sequence Length = 1281 Score = 200 bits (101), Expect = 2e-48 Identities = 149/165 (90%) Strand = Plus / Plus Query: 152 ggcggggatctccgccgtcatccccgggtggttctccgagatcagccccatgtggcccgg 211 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 100 ggcggggatctccgccgtcatcccgggatggttctccgagatcagccccatgtggcccgg 159 Query: 212 cgaggcacactcgctgaaggtggagaaggtcctgttccaaggcaagtcagactaccaaga 271 ||||| ||||| |||||||||||||||| ||||||||||| ||||||||||||||| | Sbjct: 160 tgaggcgcactctttgaaggtggagaaggtgctgttccaagggaagtcagactaccaaaa 219 Query: 272 tgtgctggttttccagtcctccacctacgggaaggtgctcgtcct 316 || |||| || |||||||| || |||||||||||||||||||| Sbjct: 220 cgttatggtctttcagtcctctacgtacgggaaggtgctcgtcct 264 Score = 48.1 bits (24), Expect = 0.018 Identities = 36/40 (90%) Strand = Plus / Plus Query: 75 atggaggccgagacggcggcgaagagggcgcgggagagcg 114 ||||||||||| ||||||| |||||| |||||||||||| Sbjct: 44 atggaggccgatgcggcggccaagaggacgcgggagagcg 83
>ref|NM_187782.1| Oryza sativa (japonica cultivar-group), mRNA Length = 963 Score = 188 bits (95), Expect = 8e-45 Identities = 219/260 (84%), Gaps = 9/260 (3%) Strand = Plus / Plus Query: 75 atggaggccgagacggcggcgaagagggcgcgggagagcgatggcgctgcggcggcggcg 134 |||||||||||| ||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 1 atggaggccgaggcggcggcgaagagggcgcgggagagcggtgacgcggcggcggc---- 56 Query: 135 gacggagccgttgagcaggcggggatctccgccgtcatccccgggtggttctccgagatc 194 ||| |||| ||||||||||| ||||| ||||||||||| || |||||||||||||| Sbjct: 57 --cggtgccggcgagcaggcgggtatctctgccgtcatccctggatggttctccgagatt 114 Query: 195 agccccatgtggcccggcgaggcacactcgctgaaggtggagaaggtcctgttccaaggc 254 |||||||||||||| ||||||||||| ||||||| || ||||| || |||||||| Sbjct: 115 agccccatgtggcc---tgaggcacactcattgaaggtcgaaaaggtactattccaagga 171 Query: 255 aagtcagactaccaagatgtgctggttttccagtcctccacctacgggaaggtgctcgtc 314 ||||| ||||||||| ||||| |||| || ||||||||||| ||||| |||||||| || Sbjct: 172 aagtcggactaccaaaatgtgatggtgtttcagtcctccacgtacggcaaggtgcttgtg 231 Query: 315 ctgtatggggtgatccaggt 334 ||| |||| ||||| ||||| Sbjct: 232 ctggatggagtgattcaggt 251
>gb|AY103592.1| Zea mays PCO075678 mRNA sequence Length = 1471 Score = 184 bits (93), Expect = 1e-43 Identities = 147/165 (89%) Strand = Plus / Plus Query: 152 ggcggggatctccgccgtcatccccgggtggttctccgagatcagccccatgtggcccgg 211 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 159 ggcggggatctccgccgtcatcccgggatggttctccgagatcagccccatgtggcccgg 218 Query: 212 cgaggcacactcgctgaaggtggagaaggtcctgttccaaggcaagtcagactaccaaga 271 ||||| ||||| |||||||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 219 tgaggcgcactctttgaaggtggacaaggtgctgttccaagggaagtcagactaccaaag 278 Query: 272 tgtgctggttttccagtcctccacctacgggaaggtgctcgtcct 316 || |||| || |||||||| || |||||||||||||||||||| Sbjct: 279 cgttatggtctttcagtcctctacgtacgggaaggtgctcgtcct 323
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 129 bits (65), Expect = 6e-27 Identities = 118/136 (86%), Gaps = 6/136 (4%) Strand = Plus / Minus Query: 73 ggatggaggccgagacggcggcgaagagggcgcgggagagcgatggcgctgcggcggcgg 132 |||||||||||||| ||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 12669008 ggatggaggccgaggcggcggcgaagagggcgcgggagagcggtgacgcggcggcggc-- 12668951 Query: 133 cggacggagccgttgagcaggcggggatctccgccgtcatccccgggtggttctccgaga 192 ||| |||| ||||||||||| ||||| ||||||||||| || ||||||||||||| Sbjct: 12668950 ----cggtgccggcgagcaggcgggtatctctgccgtcatccctggatggttctccgaga 12668895 Query: 193 tcagccccatgtggcc 208 | |||||||||||||| Sbjct: 12668894 ttagccccatgtggcc 12668879 Score = 56.0 bits (28), Expect = 7e-05 Identities = 58/68 (85%) Strand = Plus / Minus Query: 213 gaggcacactcgctgaaggtggagaaggtcctgttccaaggcaagtcagactaccaagat 272 ||||||||||| ||||||| || ||||| || |||||||| ||||| ||||||||| || Sbjct: 12667895 gaggcacactcattgaaggtcgaaaaggtactattccaaggaaagtcggactaccaaaat 12667836 Query: 273 gtgctggt 280 ||| |||| Sbjct: 12667835 gtgatggt 12667828 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gctgcggcggcggcggacgg 139 |||||||||||||||||||| Sbjct: 28832178 gctgcggcggcggcggacgg 28832197 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 tcgtcgtcgtcgtgctctag 65 |||||||||||||||||||| Sbjct: 2103509 tcgtcgtcgtcgtgctctag 2103528
>dbj|AP004305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0492E07 Length = 143794 Score = 129 bits (65), Expect = 6e-27 Identities = 118/136 (86%), Gaps = 6/136 (4%) Strand = Plus / Minus Query: 73 ggatggaggccgagacggcggcgaagagggcgcgggagagcgatggcgctgcggcggcgg 132 |||||||||||||| ||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 43478 ggatggaggccgaggcggcggcgaagagggcgcgggagagcggtgacgcggcggcggc-- 43421 Query: 133 cggacggagccgttgagcaggcggggatctccgccgtcatccccgggtggttctccgaga 192 ||| |||| ||||||||||| ||||| ||||||||||| || ||||||||||||| Sbjct: 43420 ----cggtgccggcgagcaggcgggtatctctgccgtcatccctggatggttctccgaga 43365 Query: 193 tcagccccatgtggcc 208 | |||||||||||||| Sbjct: 43364 ttagccccatgtggcc 43349 Score = 56.0 bits (28), Expect = 7e-05 Identities = 58/68 (85%) Strand = Plus / Minus Query: 213 gaggcacactcgctgaaggtggagaaggtcctgttccaaggcaagtcagactaccaagat 272 ||||||||||| ||||||| || ||||| || |||||||| ||||| ||||||||| || Sbjct: 42365 gaggcacactcattgaaggtcgaaaaggtactattccaaggaaagtcggactaccaaaat 42306 Query: 273 gtgctggt 280 ||| |||| Sbjct: 42305 gtgatggt 42298
>dbj|AB015599.1| Coffea arabica mRNA for spermidine synthase, complete cds Length = 1383 Score = 69.9 bits (35), Expect = 5e-09 Identities = 107/131 (81%) Strand = Plus / Plus Query: 180 tggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaag 239 ||||| || ||||||||||| |||||||| || |||||||||||||| ||||| || ||| Sbjct: 113 tggttttctgagatcagcccaatgtggcctggagaggcacactcgctaaaggtagaaaag 172 Query: 240 gtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtcctccacctac 299 | || ||||| || || || || ||||| |||| |||| || ||||| || |||||| Sbjct: 173 atactattccagggaaaatctgattaccagaatgtcatggtctttcagtcatcaacctac 232 Query: 300 gggaaggtgct 310 ||||||||||| Sbjct: 233 gggaaggtgct 243
>emb|Y08253.1|DSSS2 D.stramonium mRNA for spermidine synthase 2 Length = 1217 Score = 67.9 bits (34), Expect = 2e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 180 tggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaag 239 |||||||||||||| |||||| | ||||| || || ||||||||| ||||||| |||||| Sbjct: 129 tggttctccgagattagccccctctggcctggggaagcacactcgttgaaggttgagaag 188 Query: 240 gtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 289 | |||| || || ||||| || ||||||||||| ||||||| ||||| Sbjct: 189 atattgtttcaggggaagtctgattaccaagatgtcatggtttttcagtc 238
>dbj|AB072916.2| Malus x domestica MdSPDS2a mRNA forspermidine synthase, complete cds Length = 1359 Score = 60.0 bits (30), Expect = 5e-06 Identities = 105/130 (80%) Strand = Plus / Plus Query: 160 tctccgccgtcatccccgggtggttctccgagatcagccccatgtggcccggcgaggcac 219 ||||||| || || ||||| ||||| || ||||| ||||| |||||||| || ||||||| Sbjct: 222 tctccgctgttattcccggctggttttctgagattagcccaatgtggccaggagaggcac 281 Query: 220 actcgctgaaggtggagaaggtcctgttccaaggcaagtcagactaccaagatgtgctgg 279 |||| ||||| | |||||| | |||| ||||| ||||| ||||| || ||||| ||| Sbjct: 282 actccttgaagatagagaagattttgtttcaaggaaagtccgactatcagaatgtgatgg 341 Query: 280 ttttccagtc 289 | |||||||| Sbjct: 342 tcttccagtc 351
>emb|AM177608.1| Calystegia sepium mRNA for putrescine N-methyltransferase (pmt gene) Length = 1035 Score = 60.0 bits (30), Expect = 5e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 177 gggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggag 236 |||||||| |||||| |||||| |||||||||||||| ||| ||| || ||| | ||| Sbjct: 172 gggtggttttccgagttcagccaaatgtggcccggcgaagcattctcactcaagatagag 231 Query: 237 aaggtcctgttccaaggcaagtcagactaccaagatgt 274 ||| | || |||||||| ||||| || ||||||||||| Sbjct: 232 aagctactattccaaggaaagtctgattaccaagatgt 269
>gb|AF298195.1|AF298195 Leishmania donovani spermidine synthase gene, complete cds Length = 903 Score = 56.0 bits (28), Expect = 7e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 199 ccatgtggcccggcgaggcacactcgctgaaggtggagaaggtcctgt 246 |||||||||||||| ||||||| |||||||||||||||||| |||| Sbjct: 50 ccatgtggcccggccaggcacaggggctgaaggtggagaaggttctgt 97
>dbj|AB006690.1| Hyoscyamus niger mRNA for spermidine synthase 1, complete cds Length = 1213 Score = 56.0 bits (28), Expect = 7e-05 Identities = 121/152 (79%) Strand = Plus / Plus Query: 180 tggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaag 239 |||||||| ||||| |||||| | ||||| || || |||||||| ||||||| |||||| Sbjct: 131 tggttctctgagattagccccctttggcctggggaagcacactccttgaaggttgagaag 190 Query: 240 gtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtcctccacctac 299 | |||| || || || || ||||||||| |||| ||||||||||||| || || || Sbjct: 191 atattgtttcagggaaaatctgactaccaaaatgtcatggttttccagtcatcaacttat 250 Query: 300 gggaaggtgctcgtcctgtatggggtgatcca 331 || |||||||| || || |||| |||||||| Sbjct: 251 ggaaaggtgcttgttttggatggtgtgatcca 282
>dbj|AB006693.1| Arabidopsis thaliana mRNA for spermidine synthase, partial cds Length = 1068 Score = 54.0 bits (27), Expect = 3e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 179 gtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaa 238 ||||||||| ||||| || || |||||||| || || ||||| || || ||||| ||||| Sbjct: 11 gtggttctctgagattagtcctatgtggccaggagaagcacattctctcaaggtagagaa 70 Query: 239 ggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 289 | | || |||||||| || ||||| ||||| ||||| | ||||||||||| Sbjct: 71 gattctattccaagggaaatcagattaccaggatgttattgttttccagtc 121
>ref|NM_105699.2| Arabidopsis thaliana SPDS2 (SPERMIDINE SYNTHASE 2) AT1G70310 (SPDS2) mRNA, complete cds Length = 1275 Score = 52.0 bits (26), Expect = 0.001 Identities = 89/110 (80%) Strand = Plus / Plus Query: 180 tggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaag 239 |||||||| ||||| || || |||||||| || || ||||| || || ||||| |||||| Sbjct: 212 tggttctctgagattagtcctatgtggccaggagaagcacattctctcaaggtagagaag 271 Query: 240 gtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 289 | || |||||||| || ||||| ||||| ||||| | ||||||||||| Sbjct: 272 attctattccaagggaaatcagattaccaggatgttattgttttccagtc 321
>gb|BT020360.1| Arabidopsis thaliana At1g70310 gene, complete cds Length = 1023 Score = 52.0 bits (26), Expect = 0.001 Identities = 89/110 (80%) Strand = Plus / Plus Query: 180 tggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaag 239 |||||||| ||||| || || |||||||| || || ||||| || || ||||| |||||| Sbjct: 151 tggttctctgagattagtcctatgtggccaggagaagcacattctctcaaggtagagaag 210 Query: 240 gtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 289 | || |||||||| || ||||| ||||| ||||| | ||||||||||| Sbjct: 211 attctattccaagggaaatcagattaccaggatgttattgttttccagtc 260
>ref|XM_883450.1| Leishmania major strain Friedlin spermidine synthase (L3291.03) partial mRNA Length = 903 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 199 ccatgtggcccggcgaggcacactcgctgaaggtggagaaggtcct 244 |||||||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 50 ccatgtggcccggccaggcacaggggctcaaggtggagaaggtcct 95
>emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4, right end Length = 247462 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 199 ccatgtggcccggcgaggcacactcgctgaaggtggagaaggtcct 244 |||||||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 14639 ccatgtggcccggccaggcacaggggctcaaggtggagaaggtcct 14594
>emb|AJ251297.1|ATH251297 Arabidopsis thaliana mRNA for spermidine synthase 2 (spdSyn2 gene) Length = 1225 Score = 52.0 bits (26), Expect = 0.001 Identities = 89/110 (80%) Strand = Plus / Plus Query: 180 tggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaag 239 |||||||| ||||| || || |||||||| || || ||||| || || ||||| |||||| Sbjct: 183 tggttctctgagattagtcctatgtggccaggagaagcacattctctcaaggtagagaag 242 Query: 240 gtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 289 | || |||||||| || ||||| ||||| ||||| | ||||||||||| Sbjct: 243 attctattccaagggaaatcagattaccaggatgttattgttttccagtc 292
>gb|AF375409.1| Arabidopsis thaliana At1g70310/F17O7_16 mRNA, complete cds Length = 1267 Score = 52.0 bits (26), Expect = 0.001 Identities = 89/110 (80%) Strand = Plus / Plus Query: 180 tggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaag 239 |||||||| ||||| || || |||||||| || || ||||| || || ||||| |||||| Sbjct: 211 tggttctctgagattagtcctatgtggccaggagaagcacattctctcaaggtagagaag 270 Query: 240 gtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 289 | || |||||||| || ||||| ||||| ||||| | ||||||||||| Sbjct: 271 attctattccaagggaaatcagattaccaggatgttattgttttccagtc 320
>emb|BX816602.1|CNS0AD0G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH58ZC12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1203 Score = 52.0 bits (26), Expect = 0.001 Identities = 89/110 (80%) Strand = Plus / Plus Query: 180 tggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaag 239 |||||||| ||||| || || |||||||| || || ||||| || || ||||| |||||| Sbjct: 198 tggttctctgagattagtcctatgtggccaggagaagcacattctctcaaggtagagaag 257 Query: 240 gtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 289 | || |||||||| || ||||| ||||| ||||| | ||||||||||| Sbjct: 258 attctattccaagggaaatcagattaccaggatgttattgttttccagtc 307
>dbj|AB072915.2| Malus x domestica MdSPDS1 mRNA forspermidine synthase, complete cds Length = 1407 Score = 52.0 bits (26), Expect = 0.001 Identities = 104/130 (80%) Strand = Plus / Plus Query: 160 tctccgccgtcatccccgggtggttctccgagatcagccccatgtggcccggcgaggcac 219 ||||||| ||||| ||||| ||||| || ||||| ||| | |||||||| || ||||||| Sbjct: 265 tctccgctgtcattcccggctggttttctgagattagctcaatgtggccaggagaggcac 324 Query: 220 actcgctgaaggtggagaaggtcctgttccaaggcaagtcagactaccaagatgtgctgg 279 |||| ||||| | |||||| | |||| || || ||||| ||||| || ||||| ||| Sbjct: 325 actccttgaagatagagaagattttgtttcagggaaagtccgactatcagaatgtgatgg 384 Query: 280 ttttccagtc 289 | |||||||| Sbjct: 385 tcttccagtc 394
>ref|NM_202171.1| Arabidopsis thaliana SPDS1 (SPERMIDINE SYNTHASE 1) AT1G23820 (SPDS1) transcript variant AT1G23820.2 mRNA, complete cds Length = 1347 Score = 50.1 bits (25), Expect = 0.005 Identities = 91/113 (80%) Strand = Plus / Plus Query: 177 gggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggag 236 ||||||||||| || || || || |||||||| || ||||||||||| ||||||| ||| Sbjct: 259 gggtggttctctgaaatgagtcctatgtggccaggagaggcacactcattgaaggttgag 318 Query: 237 aaggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 289 || || |||| ||||| || ||||| || || ||||| | ||||||||||| Sbjct: 319 aaagttttgtttcaagggaaatcagattatcaggatgttattgttttccagtc 371
>ref|NM_102230.3| Arabidopsis thaliana SPDS1 (SPERMIDINE SYNTHASE 1) AT1G23820 (SPDS1) transcript variant AT1G23820.1 mRNA, complete cds Length = 1359 Score = 50.1 bits (25), Expect = 0.005 Identities = 91/113 (80%) Strand = Plus / Plus Query: 177 gggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggag 236 ||||||||||| || || || || |||||||| || ||||||||||| ||||||| ||| Sbjct: 259 gggtggttctctgaaatgagtcctatgtggccaggagaggcacactcattgaaggttgag 318 Query: 237 aaggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 289 || || |||| ||||| || ||||| || || ||||| | ||||||||||| Sbjct: 319 aaagttttgtttcaagggaaatcagattatcaggatgttattgttttccagtc 371
>gb|AY646352.1| Cucumis sativus spermidine synthase mRNA, complete cds Length = 1398 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Plus Query: 195 agccccatgtggcccggcgaggcacactcgctgaaggtggagaaggtcctgttccaaggc 254 ||||| |||||||| || ||||| ||||| |||||||||||||||| |||| ||||| Sbjct: 180 agcccaatgtggcctggagaggctcactccttgaaggtggagaaggttttgtttcaaggg 239 Query: 255 aagtc 259 ||||| Sbjct: 240 aagtc 244
>emb|AJ251296.1|ATH251296 Arabidopsis thaliana mRNA for spermidine synthase 1 (spdSyn1 gene) Length = 1218 Score = 50.1 bits (25), Expect = 0.005 Identities = 91/113 (80%) Strand = Plus / Plus Query: 177 gggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggag 236 ||||||||||| || || || || |||||||| || ||||||||||| ||||||| ||| Sbjct: 193 gggtggttctctgaaatgagtcctatgtggccaggagaggcacactcattgaaggttgag 252 Query: 237 aaggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 289 || || |||| ||||| || ||||| || || ||||| | ||||||||||| Sbjct: 253 aaagttttgtttcaagggaaatcagattatcaggatgttattgttttccagtc 305
>gb|AY093360.1| Arabidopsis thaliana strong similarity to spermidine synthase (At1g23820) mRNA, complete cds Length = 1125 Score = 50.1 bits (25), Expect = 0.005 Identities = 91/113 (80%) Strand = Plus / Plus Query: 177 gggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggag 236 ||||||||||| || || || || |||||||| || ||||||||||| ||||||| ||| Sbjct: 136 gggtggttctctgaaatgagtcctatgtggccaggagaggcacactcattgaaggttgag 195 Query: 237 aaggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 289 || || |||| ||||| || ||||| || || ||||| | ||||||||||| Sbjct: 196 aaagttttgtttcaagggaaatcagattatcaggatgttattgttttccagtc 248
>gb|AY062593.1| Arabidopsis thaliana Strong similarity to spermidine synthase (At1g23820; F5O8.38) mRNA, complete cds Length = 1258 Score = 50.1 bits (25), Expect = 0.005 Identities = 91/113 (80%) Strand = Plus / Plus Query: 177 gggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggag 236 ||||||||||| || || || || |||||||| || ||||||||||| ||||||| ||| Sbjct: 204 gggtggttctctgaaatgagtcctatgtggccaggagaggcacactcattgaaggttgag 263 Query: 237 aaggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 289 || || |||| ||||| || ||||| || || ||||| | ||||||||||| Sbjct: 264 aaagttttgtttcaagggaaatcagattatcaggatgttattgttttccagtc 316
>emb|BX814923.1|CNS0ABBK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS19ZC12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1259 Score = 50.1 bits (25), Expect = 0.005 Identities = 91/113 (80%) Strand = Plus / Plus Query: 177 gggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggag 236 ||||||||||| || || || || |||||||| || ||||||||||| ||||||| ||| Sbjct: 192 gggtggttctctgaaatgagtcctatgtggccaggagaggcacactcattgaaggtcgag 251 Query: 237 aaggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 289 || || |||| ||||| || ||||| || || ||||| | ||||||||||| Sbjct: 252 aaagttttgtttcaagggaaatcagattatcaggatgttattgttttccagtc 304
>gb|AY705438.1| Silene latifolia spermidine synthase Y gene, partial cds Length = 4133 Score = 50.1 bits (25), Expect = 0.005 Identities = 40/45 (88%) Strand = Plus / Plus Query: 216 gcacactcgctgaaggtggagaaggtcctgttccaaggcaagtca 260 ||||| || ||||| ||||||||| ||||||||||||| |||||| Sbjct: 1615 gcacattccctgaaagtggagaagatcctgttccaagggaagtca 1659
>gb|AY705436.1| Silene vulgaris spermidine synthase gene, partial cds Length = 3533 Score = 50.1 bits (25), Expect = 0.005 Identities = 40/45 (88%) Strand = Plus / Plus Query: 216 gcacactcgctgaaggtggagaaggtcctgttccaaggcaagtca 260 ||||| || ||||| ||||||||| ||||||||||||| |||||| Sbjct: 1137 gcacattccctgaaagtggagaagatcctgttccaagggaagtca 1181
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 82 ccgagacggcggcgaagagggcgc 105 |||||||||||||||||||||||| Sbjct: 2661789 ccgagacggcggcgaagagggcgc 2661766
>emb|AJ006414.1|LES6414 Lycopersicon esculentum mRNA for spermidine synthase Length = 1269 Score = 48.1 bits (24), Expect = 0.018 Identities = 120/152 (78%) Strand = Plus / Plus Query: 180 tggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaag 239 |||||||| ||||| |||||| | ||||| || || |||||||| ||||||| |||||| Sbjct: 259 tggttctctgagattagccccctttggcctggggaagcacactcattgaaggttgagaag 318 Query: 240 gtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtcctccacctac 299 | |||| || || ||||| || ||||| |||| ||||||| ||||| || || || Sbjct: 319 atattgtttcaggggaagtctgattaccagaatgtcttggtttttcagtcatcaacttat 378 Query: 300 gggaaggtgctcgtcctgtatggggtgatcca 331 ||||||||||| || || |||| |||||||| Sbjct: 379 gggaaggtgcttgttttggatggtgtgatcca 410
>gb|AF005842.1|AF005842 Rhodobacter sphaeroides C4-dicarboxylate binding-protein precursor (dctP), small integral membrane transport protein (dctQ) and large integral membrane transport protein (dctM) genes, complete cds Length = 3718 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 82 ccgagacggcggcgaagagggcgc 105 |||||||||||||||||||||||| Sbjct: 2223 ccgagacggcggcgaagagggcgc 2200
>dbj|AB100310.1| Petunia x hybrida spds mRNA for spermidine synthase, complete cds Length = 1249 Score = 48.1 bits (24), Expect = 0.018 Identities = 51/60 (85%) Strand = Plus / Plus Query: 180 tggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaag 239 |||||||| ||||| |||||| | ||||| || || |||||||| |||||||||||||| Sbjct: 154 tggttctctgagattagccccctttggcctggggaagcacactcattgaaggtggagaag 213
>gb|AF126809.1|AF126809 Nicotiana tabacum cultivar Xanthi putrescine N-methyltransferase (PMT2) gene, complete cds Length = 3091 Score = 46.1 bits (23), Expect = 0.072 Identities = 41/47 (87%) Strand = Plus / Plus Query: 228 aaggtggagaaggtcctgttccaaggcaagtcagactaccaagatgt 274 ||||| |||||| | |||||||| || ||||| |||||||||||||| Sbjct: 1545 aaggttgagaagttactgttccaggggaagtctgactaccaagatgt 1591
>dbj|AB004322.2| Nicotiana sylvestris NsPMT1 gene for putrescine N-methyltransferase, complete cds Length = 2683 Score = 46.1 bits (23), Expect = 0.072 Identities = 41/47 (87%) Strand = Plus / Plus Query: 228 aaggtggagaaggtcctgttccaaggcaagtcagactaccaagatgt 274 ||||| |||||| | |||||||| || ||||| |||||||||||||| Sbjct: 1099 aaggttgagaagttactgttccaggggaagtctgactaccaagatgt 1145
>ref|XM_468128.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1775 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 gcggcggcggcggacggagccg 144 |||||||||||||||||||||| Sbjct: 897 gcggcggcggcggacggagccg 918
>emb|Z11920.1|OSHSP82A O.sativa gene for heat shock protein 82 HSP82 Length = 5310 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 115 atggcgctgcggcggcggcgga 136 |||||||||||||||||||||| Sbjct: 928 atggcgctgcggcggcggcgga 907
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 115 atggcgctgcggcggcggcgga 136 |||||||||||||||||||||| Sbjct: 24716200 atggcgctgcggcggcggcgga 24716221 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 gccgagctcacctcgtcgtcgtcgt 58 |||||||| |||||||||||||||| Sbjct: 17352738 gccgagctgacctcgtcgtcgtcgt 17352762 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 gccgagctcacctcgtcgtcgtcgt 58 |||||||| |||||||||||||||| Sbjct: 16466870 gccgagctgacctcgtcgtcgtcgt 16466894 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 gccgagctcacctcgtcgtcgtcgt 58 |||||||| |||||||||||||||| Sbjct: 13858545 gccgagctgacctcgtcgtcgtcgt 13858521
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 gcggcggcggcggacggagccg 144 |||||||||||||||||||||| Sbjct: 33241192 gcggcggcggcggacggagccg 33241171 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 gccgagctcacctcgtcgtcgtcgt 58 |||||||| |||||||||||||||| Sbjct: 10480124 gccgagctgacctcgtcgtcgtcgt 10480100
>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1345_D02 Length = 159613 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 115 atggcgctgcggcggcggcgga 136 |||||||||||||||||||||| Sbjct: 17001 atggcgctgcggcggcggcgga 17022
>dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A06 Length = 92836 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 115 atggcgctgcggcggcggcgga 136 |||||||||||||||||||||| Sbjct: 88504 atggcgctgcggcggcggcgga 88525
>dbj|AP004849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1311_D08 Length = 163702 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 gcggcggcggcggacggagccg 144 |||||||||||||||||||||| Sbjct: 70501 gcggcggcggcggacggagccg 70480
>dbj|AK105110.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-F08, full insert sequence Length = 1775 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 gcggcggcggcggacggagccg 144 |||||||||||||||||||||| Sbjct: 897 gcggcggcggcggacggagccg 918
>ref|NM_197876.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0027L23.17), mRNA Length = 468 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 gatggcgctgcggcggcggcg 134 ||||||||||||||||||||| Sbjct: 316 gatggcgctgcggcggcggcg 336
>ref|NM_195918.1| Oryza sativa (japonica cultivar-group) putative retroelement (OSJNAb0078C13.2), mRNA Length = 4500 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 gccgagctcacctcgtcgtcgtcgt 58 |||||||| |||||||||||||||| Sbjct: 3026 gccgagctgacctcgtcgtcgtcgt 3002
>gb|BT018573.1| Zea mays clone EL01N0443D05.d mRNA sequence Length = 1450 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 122 tgcggcggcggcggacggagc 142 ||||||||||||||||||||| Sbjct: 458 tgcggcggcggcggacggagc 438
>gb|AC091666.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0078C13, complete sequence Length = 140553 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 gccgagctcacctcgtcgtcgtcgt 58 |||||||| |||||||||||||||| Sbjct: 33009 gccgagctgacctcgtcgtcgtcgt 32985
>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05, complete sequence Length = 164943 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 agctcacctcgtcgtcgtcgt 58 ||||||||||||||||||||| Sbjct: 107117 agctcacctcgtcgtcgtcgt 107097
>gb|AC123594.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0078C13, complete sequence Length = 146538 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 gccgagctcacctcgtcgtcgtcgt 58 |||||||| |||||||||||||||| Sbjct: 17705 gccgagctgacctcgtcgtcgtcgt 17729
>gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L23 genomic sequence, complete sequence Length = 143961 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 gatggcgctgcggcggcggcg 134 ||||||||||||||||||||| Sbjct: 67485 gatggcgctgcggcggcggcg 67505
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 agctcacctcgtcgtcgtcgt 58 ||||||||||||||||||||| Sbjct: 34489632 agctcacctcgtcgtcgtcgt 34489612
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 gccgagctcacctcgtcgtcgtcgt 58 |||||||| |||||||||||||||| Sbjct: 14686839 gccgagctgacctcgtcgtcgtcgt 14686863 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gctgcggcggcggcggacgg 139 |||||||||||||||||||| Sbjct: 22824741 gctgcggcggcggcggacgg 22824722
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 gatggcgctgcggcggcggcg 134 ||||||||||||||||||||| Sbjct: 22415462 gatggcgctgcggcggcggcg 22415482 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 gccgagctcacctcgtcgtcgtcgt 58 |||||||| |||||||||||||||| Sbjct: 10000946 gccgagctgacctcgtcgtcgtcgt 10000970 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 acctcgtcgtcgtcgtgctc 62 |||||||||||||||||||| Sbjct: 15572358 acctcgtcgtcgtcgtgctc 15572377
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 cacctcgtcgtcgtcgtgctc 62 ||||||||||||||||||||| Sbjct: 18601313 cacctcgtcgtcgtcgtgctc 18601333
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 gccgagctcacctcgtcgtcgtcgt 58 |||||||| |||||||||||||||| Sbjct: 22564406 gccgagctgacctcgtcgtcgtcgt 22564430 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 108 gagagcgatggcgctgcggcggcggcgg 135 ||||||| ||||| |||||||||||||| Sbjct: 8716085 gagagcggtggcggtgcggcggcggcgg 8716058
>emb|BX816927.1|CNS0ABX3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH77ZD02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1275 Score = 42.1 bits (21), Expect = 1.1 Identities = 90/113 (79%) Strand = Plus / Plus Query: 177 gggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggag 236 ||||||||||| || || || || |||||||| || ||||||||||| ||||||| || Sbjct: 195 gggtggttctctgaaatgagtcctatgtggccaggagaggcacactcattgaaggttgaa 254 Query: 237 aaggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 289 || || |||| ||||| || ||||| || || ||||| | ||||||||||| Sbjct: 255 aaagttttgtttcaagggaaatcagattatcaggatgttattgttttccagtc 307
>dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1097D05 Length = 144879 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 gccgagctcacctcgtcgtcgtcgt 58 |||||||| |||||||||||||||| Sbjct: 80143 gccgagctgacctcgtcgtcgtcgt 80167
>dbj|AP004561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0465H09 Length = 148590 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 gccgagctcacctcgtcgtcgtcgt 58 |||||||| |||||||||||||||| Sbjct: 66264 gccgagctgacctcgtcgtcgtcgt 66240
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 gccgagctcacctcgtcgtcgtcgt 58 |||||||| |||||||||||||||| Sbjct: 122546 gccgagctgacctcgtcgtcgtcgt 122522
>dbj|AP005694.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0063E14 Length = 174415 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 gccgagctcacctcgtcgtcgtcgt 58 |||||||| |||||||||||||||| Sbjct: 61292 gccgagctgacctcgtcgtcgtcgt 61268
>dbj|AP005485.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1136_D12 Length = 105521 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 gccgagctcacctcgtcgtcgtcgt 58 |||||||| |||||||||||||||| Sbjct: 2940 gccgagctgacctcgtcgtcgtcgt 2916
>dbj|AP004647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1267_E11 Length = 117073 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 gccgagctcacctcgtcgtcgtcgt 58 |||||||| |||||||||||||||| Sbjct: 36362 gccgagctgacctcgtcgtcgtcgt 36386
>dbj|AP005523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0488B06 Length = 154764 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 gccgagctcacctcgtcgtcgtcgt 58 |||||||| |||||||||||||||| Sbjct: 77526 gccgagctgacctcgtcgtcgtcgt 77550
>dbj|AK105294.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-G10, full insert sequence Length = 1721 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 cacctcgtcgtcgtcgtgctc 62 ||||||||||||||||||||| Sbjct: 614 cacctcgtcgtcgtcgtgctc 634
>emb|AL732344.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0403D02, complete sequence Length = 138387 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 agctcacctcgtcgtcgtcgt 58 ||||||||||||||||||||| Sbjct: 111159 agctcacctcgtcgtcgtcgt 111139
>emb|AL732351.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0103C06, complete sequence Length = 104146 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 agctcacctcgtcgtcgtcgt 58 ||||||||||||||||||||| Sbjct: 21492 agctcacctcgtcgtcgtcgt 21472
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 gatggcgctgcggcggcggcg 134 ||||||||||||||||||||| Sbjct: 22427530 gatggcgctgcggcggcggcg 22427550 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 gccgagctcacctcgtcgtcgtcgt 58 |||||||| |||||||||||||||| Sbjct: 10006985 gccgagctgacctcgtcgtcgtcgt 10007009 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 acctcgtcgtcgtcgtgctc 62 |||||||||||||||||||| Sbjct: 15580599 acctcgtcgtcgtcgtgctc 15580618
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 gccgagctcacctcgtcgtcgtcgt 58 |||||||| |||||||||||||||| Sbjct: 14641122 gccgagctgacctcgtcgtcgtcgt 14641146 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gctgcggcggcggcggacgg 139 |||||||||||||||||||| Sbjct: 22752932 gctgcggcggcggcggacgg 22752913
>emb|AL954159.4|CNS08CCX Oryza sativa chromosome 12, . BAC OSJNBa0057C04 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131673 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 gccgagctcacctcgtcgtcgtcgt 58 |||||||| |||||||||||||||| Sbjct: 57246 gccgagctgacctcgtcgtcgtcgt 57222
>emb|AL928751.2|CNS08CBO Oryza sativa chromosome 12, . BAC OSJNBa0037B01 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133207 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 gccgagctcacctcgtcgtcgtcgt 58 |||||||| |||||||||||||||| Sbjct: 131960 gccgagctgacctcgtcgtcgtcgt 131936
>ref|NM_187942.1| Oryza sativa (japonica cultivar-group), Ozsa8362 predicted mRNA Length = 1782 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 108 gagagcgatggcgctgcggcggcggcgg 135 ||||||| ||||| |||||||||||||| Sbjct: 394 gagagcggtggcggtgcggcggcggcgg 421
>ref|XM_479552.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1581 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gctgcggcggcggcggacgg 139 |||||||||||||||||||| Sbjct: 1076 gctgcggcggcggcggacgg 1095
>ref|XM_476597.1| Oryza sativa (japonica cultivar-group), mRNA Length = 231 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 tcgtcgtcgtcgtgctctag 65 |||||||||||||||||||| Sbjct: 189 tcgtcgtcgtcgtgctctag 208
>gb|AY023197.1| Oryza sativa microsatellite MRG5522 containing (GCG)X9, genomic sequence Length = 227 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 108 gagagcgatggcgctgcggcggcggcgg 135 ||||||| ||||| |||||||||||||| Sbjct: 86 gagagcggtggcggtgcggcggcggcgg 113
>ref|XM_417130.1| PREDICTED: Gallus gallus similar to Potential phospholipid-transporting ATPase IB (ATPase class I type 8A member 2) (ML-1) (LOC418936), mRNA Length = 8442 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gctgcggcggcggcggacgg 139 |||||||||||||||||||| Sbjct: 440 gctgcggcggcggcggacgg 421
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 atgtgctggttttccagtcc 290 |||||||||||||||||||| Sbjct: 2953141 atgtgctggttttccagtcc 2953160
>gb|DQ481666.1| Takifugu rubripes HoxBb gene cluster, complete sequence Length = 130146 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 ggcgctgcggcggcggcgga 136 |||||||||||||||||||| Sbjct: 27319 ggcgctgcggcggcggcgga 27338
>gb|AC138454.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019B24, complete sequence Length = 162385 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gctgcggcggcggcggacgg 139 |||||||||||||||||||| Sbjct: 156440 gctgcggcggcggcggacgg 156421
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 gcgatggcgctgcggcggcggcgg 135 |||||||||| ||||||||||||| Sbjct: 30618375 gcgatggcgcggcggcggcggcgg 30618352 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cgccgtcatccccgggtggt 183 |||||||||||||||||||| Sbjct: 14308968 cgccgtcatccccgggtggt 14308987
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 112 gcgatggcgctgcggcggcggcgg 135 |||||||||| ||||||||||||| Sbjct: 144017 gcgatggcgcggcggcggcggcgg 144040
>emb|CR732816.1| Gallus gallus finished cDNA, clone ChEST742i24 Length = 1113 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ggtggagaaggtcctgttcc 249 |||||||||||||||||||| Sbjct: 107 ggtggagaaggtcctgttcc 126
>ref|XM_862775.1| PREDICTED: Canis familiaris similar to Insulin gene enhancer protein ISL-1 (Islet-1), transcript variant 6 (LOC612954), mRNA Length = 1720 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gcgctgcggcggcggcggac 137 |||||||||||||||||||| Sbjct: 46 gcgctgcggcggcggcggac 27
>ref|XM_862768.1| PREDICTED: Canis familiaris similar to Insulin gene enhancer protein ISL-1 (Islet-1), transcript variant 5 (LOC612954), mRNA Length = 1786 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gcgctgcggcggcggcggac 137 |||||||||||||||||||| Sbjct: 46 gcgctgcggcggcggcggac 27
>ref|XM_862760.1| PREDICTED: Canis familiaris similar to Insulin gene enhancer protein ISL-1 (Islet-1), transcript variant 4 (LOC612954), mRNA Length = 1786 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gcgctgcggcggcggcggac 137 |||||||||||||||||||| Sbjct: 46 gcgctgcggcggcggcggac 27
>ref|XM_862752.1| PREDICTED: Canis familiaris similar to Insulin gene enhancer protein ISL-1 (Islet-1), transcript variant 3 (LOC612954), mRNA Length = 1846 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gcgctgcggcggcggcggac 137 |||||||||||||||||||| Sbjct: 46 gcgctgcggcggcggcggac 27
>ref|XM_862747.1| PREDICTED: Canis familiaris similar to Insulin gene enhancer protein ISL-1 (Islet-1), transcript variant 2 (LOC612954), mRNA Length = 1801 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gcgctgcggcggcggcggac 137 |||||||||||||||||||| Sbjct: 46 gcgctgcggcggcggcggac 27
>ref|XM_848628.1| PREDICTED: Canis familiaris similar to Insulin gene enhancer protein ISL-1 (Islet-1), transcript variant 1 (LOC612954), mRNA Length = 1806 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gcgctgcggcggcggcggac 137 |||||||||||||||||||| Sbjct: 63 gcgctgcggcggcggcggac 44
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cagccccatgtggcccggcg 213 |||||||||||||||||||| Sbjct: 2971054 cagccccatgtggcccggcg 2971035
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 agacggcggcgaagagggcg 104 |||||||||||||||||||| Sbjct: 101208 agacggcggcgaagagggcg 101227
>gb|DQ397600.1| Cenarchaeum symbiosum clone C07B08, complete sequence Length = 41295 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 agcaggcggggatctccgcc 167 |||||||||||||||||||| Sbjct: 7105 agcaggcggggatctccgcc 7086
>gb|DQ397575.1| Cenarchaeum symbiosum clone C11D05, complete sequence Length = 41867 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 agcaggcggggatctccgcc 167 |||||||||||||||||||| Sbjct: 24565 agcaggcggggatctccgcc 24546
>gb|AC171242.2| Gallus gallus BAC clone CH261-59O7 from chromosome ul, complete sequence Length = 191648 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gctgcggcggcggcggacgg 139 |||||||||||||||||||| Sbjct: 145649 gctgcggcggcggcggacgg 145668
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cgccgtcatccccgggtggt 183 |||||||||||||||||||| Sbjct: 58197 cgccgtcatccccgggtggt 58216
>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18, complete sequence Length = 122159 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cgccgtcatccccgggtggt 183 |||||||||||||||||||| Sbjct: 120356 cgccgtcatccccgggtggt 120375
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 cgctgcggcggcggcggacg 138 |||||||||||||||||||| Sbjct: 2153677 cgctgcggcggcggcggacg 2153658
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gctgcggcggcggcggacgg 139 |||||||||||||||||||| Sbjct: 1641904 gctgcggcggcggcggacgg 1641885
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 cctcgtcgtcgtcgtgctct 63 |||||||||||||||||||| Sbjct: 1172898 cctcgtcgtcgtcgtgctct 1172917
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 gcgatggcgctgcggcggcggcgg 135 |||||||||| ||||||||||||| Sbjct: 30709797 gcgatggcgcggcggcggcggcgg 30709774 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cgccgtcatccccgggtggt 183 |||||||||||||||||||| Sbjct: 14303943 cgccgtcatccccgggtggt 14303962
>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20, complete sequence Length = 193119 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 acctcgtcgtcgtcgtgctc 62 |||||||||||||||||||| Sbjct: 59724 acctcgtcgtcgtcgtgctc 59743
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 ggccgagacggcggcgaaga 99 |||||||||||||||||||| Sbjct: 2993916 ggccgagacggcggcgaaga 2993897
>gb|AC009277.4|AC009277 Homo sapiens chromosome 18, clone RP11-481E24, complete sequence Length = 160401 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 gagaaggtcctgttccaagg 253 |||||||||||||||||||| Sbjct: 31123 gagaaggtcctgttccaagg 31104
>dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0699D11 Length = 140825 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 108 gagagcgatggcgctgcggcggcggcgg 135 ||||||| ||||| |||||||||||||| Sbjct: 33542 gagagcggtggcggtgcggcggcggcgg 33515
>gb|AC171011.2| Gallus gallus BAC clone CH261-112C5 from chromosome ul, complete sequence Length = 230767 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gctgcggcggcggcggacgg 139 |||||||||||||||||||| Sbjct: 98414 gctgcggcggcggcggacgg 98433
>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008J01 Length = 159900 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gctgcggcggcggcggacgg 139 |||||||||||||||||||| Sbjct: 89864 gctgcggcggcggcggacgg 89883
>dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0542E10 Length = 146196 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 cctcgtcgtcgtcgtgctct 63 |||||||||||||||||||| Sbjct: 24851 cctcgtcgtcgtcgtgctct 24870
>dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0495H05 Length = 205595 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 tcgtcgtcgtcgtgctctag 65 |||||||||||||||||||| Sbjct: 187806 tcgtcgtcgtcgtgctctag 187825
>emb|AL691421.9| Mouse DNA sequence from clone RP23-21A16 on chromosome X, complete sequence Length = 221461 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 aggttttggggatggaggccgaga 87 ||||||||||||||||||| |||| Sbjct: 34505 aggttttggggatggaggcagaga 34482
>dbj|AK120411.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B13, full insert sequence Length = 1422 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cgccgtcatccccgggtggt 183 |||||||||||||||||||| Sbjct: 1001 cgccgtcatccccgggtggt 1020
>emb|AJ238245.1|TTA238245 Triticum tauschii st2 gene, exons 1-13 Length = 5329 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 123 gcggcggcggcggacggagccgttgagc 150 ||||||||||||||||||| || ||||| Sbjct: 4885 gcggcggcggcggacggagacggtgagc 4858
>dbj|AK110457.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-F05, full insert sequence Length = 3027 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gcgctgcggcggcggcggac 137 |||||||||||||||||||| Sbjct: 1680 gcgctgcggcggcggcggac 1661
>dbj|AK109712.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-H03, full insert sequence Length = 2670 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 cctcgtcgtcgtcgtgctct 63 |||||||||||||||||||| Sbjct: 1317 cctcgtcgtcgtcgtgctct 1336
>dbj|AK099751.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B12, full insert sequence Length = 1422 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cgccgtcatccccgggtggt 183 |||||||||||||||||||| Sbjct: 1001 cgccgtcatccccgggtggt 1020
>dbj|AK067013.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093E22, full insert sequence Length = 1192 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 acctcgtcgtcgtcgtgctc 62 |||||||||||||||||||| Sbjct: 167 acctcgtcgtcgtcgtgctc 148
>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1417_E01 Length = 118058 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 tcgtcgtcgtcgtgctctag 65 |||||||||||||||||||| Sbjct: 59302 tcgtcgtcgtcgtgctctag 59321
>gb|AY106782.1| Zea mays PCO117134 mRNA sequence Length = 862 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 tgcggcggcggcggacggag 141 |||||||||||||||||||| Sbjct: 304 tgcggcggcggcggacggag 285
>tpe|BN000574.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx45 gene for class III peroxidase 45 precursor, exons 1-2 Length = 1091 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cgccgtcatccccgggtggt 183 |||||||||||||||||||| Sbjct: 968 cgccgtcatccccgggtggt 987
>gb|AC174770.1| Gasterosteus aculeatus clone VMRC28-84C03, complete sequence Length = 124367 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 gcggcggcggcggacggagccgtt 146 |||||||||||| ||||||||||| Sbjct: 691 gcggcggcggcgtacggagccgtt 714
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gctgcggcggcggcggacgg 139 |||||||||||||||||||| Sbjct: 1639625 gctgcggcggcggcggacgg 1639606
>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 148705 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gctgcggcggcggcggacgg 139 |||||||||||||||||||| Sbjct: 132103 gctgcggcggcggcggacgg 132122 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,108,908 Number of Sequences: 3902068 Number of extensions: 3108908 Number of successful extensions: 104709 Number of sequences better than 10.0: 124 Number of HSP's better than 10.0 without gapping: 138 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 99413 Number of HSP's gapped (non-prelim): 5291 length of query: 336 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 314 effective length of database: 17,147,199,772 effective search space: 5384220728408 effective search space used: 5384220728408 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)