ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast12c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009333.1| Triticum aestivum clone wlm4.pk0002.c12:fis, full... 430 e-117
2gb|BT016536.1| Zea mays clone Contig369 mRNA sequence 204 2e-49
3gb|AY106340.1| Zea mays PCO143515 mRNA sequence 204 2e-49
4gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome... 200 3e-48
5dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 200 3e-48
6ref|NM_183735.1| Oryza sativa (japonica cultivar-group), predic... 170 3e-39
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
8dbj|AP003535.2| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
9gb|BT018493.1| Zea mays clone EL01N0425H03.d mRNA sequence 147 4e-32
10dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 100 9e-18
11gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 100 9e-18
12emb|AL831807.7|CNS08CAK Oryza sativa chromosome 12, . BAC OSJNBa... 100 9e-18
13emb|AL732647.4|CNS08C9M Oryza sativa chromosome 12, . BAC OSJNBb... 100 9e-18
14gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, ... 44 0.44
15gb|AE005903.1| Caulobacter crescentus CB15 section 229 of 359 of... 44 0.44
16dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 44 0.44
17gb|AE005043.1| Halobacterium sp. NRC-1 section 74 of 170 of the ... 44 0.44
18emb|X64521.1|HHFEROXI H.halobium gene for pyruvate:ferredoxin ox... 44 0.44
19gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 1.7
20gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 42 1.7
21emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 42 1.7
22emb|AJ811516.1| Uncultured bacterium partial nirS gene for putat... 42 1.7
23emb|AJ811514.1| Uncultured bacterium partial nirS gene for putat... 42 1.7
24emb|AJ811513.1| Uncultured bacterium partial nirS gene for putat... 42 1.7
25emb|AJ811512.1| Uncultured bacterium partial nirS gene for putat... 42 1.7
26emb|AJ811511.1| Uncultured bacterium partial nirS gene for putat... 42 1.7
27emb|AJ811510.1| Uncultured bacterium partial nirS gene for putat... 42 1.7
28emb|AJ811508.1| Uncultured bacterium partial nirS gene for putat... 42 1.7
29emb|AJ811506.1| Uncultured bacterium partial nirS gene for putat... 42 1.7
30emb|AJ811504.1| Uncultured bacterium partial nirS gene for putat... 42 1.7
31emb|AJ811503.1| Uncultured bacterium partial nirS gene for putat... 42 1.7
32emb|AJ811501.1| Uncultured bacterium partial nirS gene for putat... 42 1.7
33emb|AJ811500.1| Uncultured bacterium partial nirS gene for putat... 42 1.7
34emb|AJ811499.1| Uncultured bacterium partial nirS gene for putat... 42 1.7
35emb|AJ811498.1| Uncultured bacterium partial nirS gene for putat... 42 1.7
36emb|AJ811496.1| Uncultured bacterium partial nirS gene for putat... 42 1.7
37emb|AJ811495.1| Uncultured bacterium partial nirS gene for putat... 42 1.7
38emb|AJ811494.1| Uncultured bacterium partial nirS gene for putat... 42 1.7
39emb|AJ811490.1| Uncultured bacterium partial nirS gene for putat... 42 1.7
40emb|AJ811488.1| Uncultured bacterium partial nirS gene for putat... 42 1.7
41emb|AJ811485.1| Uncultured bacterium partial nirS gene for putat... 42 1.7
42emb|AJ811483.1| Uncultured bacterium partial nirS gene for putat... 42 1.7
43emb|AJ811481.1| Uncultured bacterium partial nirS gene for putat... 42 1.7
44gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 1.7
45emb|BX024714.1|CNS08R8E Single read from an extremity of a full-... 42 1.7
46emb|BX014345.1|CNS08J8D Single read from an extremity of a full-... 42 1.7
47emb|BX014344.1|CNS08J8C Single read from an extremity of a full-... 42 1.7
48gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 42 1.7
49emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome... 42 1.7
50emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.7
51emb|BX640430.1| Bordetella parapertussis strain 12822, complete ... 42 1.7
52emb|BX640426.1| Bordetella parapertussis strain 12822, complete ... 42 1.7
53emb|BX640417.1| Bordetella pertussis strain Tohama I, complete g... 42 1.7
54emb|BX640415.1| Bordetella pertussis strain Tohama I, complete g... 42 1.7
55emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete ... 42 1.7
56emb|AJ440494.1|IBA440494 Pseudomonas sp. BA2.5 partial nirS gene... 42 1.7
57gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.7
58gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 42 1.7
59dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.7
60gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.7
61gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 42 1.7
62gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 6.8
63ref|XM_472427.1| Oryza sativa (japonica cultivar-group), predic... 40 6.8
64gb|DQ215529.1| Taeniopygia guttata clone 0061P0019C12 RIKEN cDNA... 40 6.8
65gb|DQ215528.1| Taeniopygia guttata clone 0058P0032A06 RIKEN cDNA... 40 6.8
66ref|XM_474606.1| Oryza sativa (japonica cultivar-group), predic... 40 6.8
67gb|AY023162.1| Oryza sativa microsatellite MRG5487 containing (G... 40 6.8
68gb|AY632751.1| Mycobacterium avium esterase (lipL) gene, complet... 40 6.8
69gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 6.8
70gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 6.8
71gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 6.8
72ref|XM_983991.1| PREDICTED: Mus musculus SRY-box containing gene... 40 6.8
73ref|XM_756268.1| Ustilago maydis 521 hypothetical protein (UM052... 40 6.8
74gb|AC105404.4| Mus musculus BAC clone RP24-112M13 from chromosom... 40 6.8
75emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.8
76gb|AC163293.4| Mus musculus BAC clone RP23-156J21 from chromosom... 40 6.8
77emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete ... 40 6.8
78emb|AL663013.4|OSJN00214 Oryza sativa genomic DNA, chromosome 4,... 40 6.8
79emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4,... 40 6.8
80emb|AJ576039.1|GWE576039 Gordonia westfalica strain DSM44215T pl... 40 6.8
81emb|AL645948.10| Mouse DNA sequence from clone RP23-298M7 on chr... 40 6.8
82emb|AL669928.8| Mouse DNA sequence from clone RP23-76F22 on chro... 40 6.8
83gb|CP000282.1| Saccharophagus degradans 2-40, complete genome 40 6.8
84gb|AE012510.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 6.8
85gb|AC012101.7| Homo sapiens chromosome 18, clone RP11-396D4, com... 40 6.8
86gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 6.8
87gb|AE006470.1| Chlorobium tepidum TLS, complete genome 40 6.8
88dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
89dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
90dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
91gb|AF197466.1|AF197466 Pseudomonas fluorescens NirP (nirP), NirO... 40 6.8
92dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.8
93gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.8
94gb|AY005801.1| Mus musculus Sox-30 mRNA, complete cds 40 6.8
95gb|AC116003.7| Homo sapiens chromosome 18, clone RP11-321M21, co... 40 6.8
96dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 6.8
97dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
98dbj|AP005653.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
99dbj|AK067581.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
100emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 6.8
101gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 6.8
102gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 6.8
103gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 6.8
104ref|NM_173384.1| Mus musculus SRY-box containing gene 30 (Sox30)... 40 6.8
105gb|U09865.1|AEU09865 Alcaligenes eutrophus pyruvate dehydrogenas... 40 6.8 
>gb|BT009333.1| Triticum aestivum clone wlm4.pk0002.c12:fis, full insert mRNA
           sequence
          Length = 1604

 Score =  430 bits (217), Expect = e-117
 Identities = 377/429 (87%), Gaps = 1/429 (0%)
 Strand = Plus / Plus

                                                                       
Query: 74  caaccatggctgcgccgctggccgagcgctcgttcgacgtcatcgtggtgggcgcgggta 133
           ||||||||||||||| || ||||||||| ||||||||||| ||||||||||||||||| |
Sbjct: 70  caaccatggctgcgcagccggccgagcggtcgttcgacgtgatcgtggtgggcgcgggca 129

                                                                       
Query: 134 tcatcggcagctgtgcggcgcacgcggcggcgtcccggggcgcgagagtgctcctgctcg 193
           |||| |||||||| |||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 130 tcatgggcagctgcgcggcgcacgcggcggcgtcccggggcgcgcgcgtgctcctgctcg 189

                                                                       
Query: 194 agcgcttcgacctgctgcaccagcgcggctcgtcgcacggcgagtcccgcaccacccgcc 253
           |||  ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| 
Sbjct: 190 agcagttcgacctgctgcaccagcgcgggtcgtcgcacggcgagtcccgcaccatccgcg 249

                                                                       
Query: 254 ccacctacacgcggccgcagtacccgcccatggtccggctcgcgcaccgcctctggcacg 313
           |||||||| ||| |||||  ||||||||||||||||| ||| ||| |||||||||| |||
Sbjct: 250 ccacctacccgcagccgcgctacccgcccatggtccgcctctcgcgccgcctctgggacg 309

                                                                       
Query: 314 acgccgagcgcgacgccggctacaccgtgctcacgcccaccccgcacctcgacctggggc 373
           ||||  |||||||| |||| ||| |||||||||||||||||||||||||||||||||| |
Sbjct: 310 acgcgcagcgcgactccgggtacgccgtgctcacgcccaccccgcacctcgacctgggcc 369

                                                                       
Query: 374 cccgagacgggccggccttcgtcgccgccatcgccaacggcggcgccagcgagctcgccc 433
           | || ||||  ||||| ||||||||| || |||||||||||||||||| |   |||||| 
Sbjct: 370 cgcgggacgacccggcgttcgtcgcctccgtcgccaacggcggcgccaccttcctcgcct 429

                                                                       
Query: 434 cggcaggggacgcatcgcggccagcgtgggcggatgccttca-ggtgccggaggggtggg 492
           |||| | ||||||  | || ||| ||||||||||||| |||| |||||| || |||||||
Sbjct: 430 cggcggcggacgcgccacgcccatcgtgggcggatgcgttcagggtgcccgacgggtggg 489

                    
Query: 493 ccgcggcga 501
           | |||||||
Sbjct: 490 cggcggcga 498
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>gb|BT016536.1| Zea mays clone Contig369 mRNA sequence
          Length = 1567

 Score =  204 bits (103), Expect = 2e-49
 Identities = 226/267 (84%)
 Strand = Plus / Plus

                                                                       
Query: 105 gttcgacgtcatcgtggtgggcgcgggtatcatcggcagctgtgcggcgcacgcggcggc 164
           ||||||||| ||||||||||||||||| ||||| |||||||| || ||  |||||||| |
Sbjct: 118 gttcgacgtgatcgtggtgggcgcgggcatcatgggcagctgcgccgcctacgcggcgtc 177

                                                                       
Query: 165 gtcccggggcgcgagagtgctcctgctcgagcgcttcgacctgctgcaccagcgcggctc 224
            || || |||||| | ||||| || || ||||| ||||||||||| ||||| || |||||
Sbjct: 178 ctctcgtggcgcgcgcgtgctgctcctggagcggttcgacctgctccaccaccggggctc 237

                                                                       
Query: 225 gtcgcacggcgagtcccgcaccacccgccccacctacacgcggccgcagtacccgcccat 284
            |||||||||||||| ||||||| |||| |||||||| ||| | |||| |||||||||||
Sbjct: 238 ctcgcacggcgagtcgcgcaccatccgcgccacctacccgcaggcgcactacccgcccat 297

                                                                       
Query: 285 ggtccggctcgcgcaccgcctctggcacgacgccgagcgcgacgccggctacaccgtgct 344
           ||| || ||  | |  ||||||||| |||| ||| ||  ||||||||| |||||||||||
Sbjct: 298 ggtgcgcctgtcccggcgcctctgggacgaggcccaggccgacgccgggtacaccgtgct 357

                                      
Query: 345 cacgcccaccccgcacctcgacctggg 371
           |||||||||||||||||||||||||||
Sbjct: 358 cacgcccaccccgcacctcgacctggg 384
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>gb|AY106340.1| Zea mays PCO143515 mRNA sequence
          Length = 1558

 Score =  204 bits (103), Expect = 2e-49
 Identities = 226/267 (84%)
 Strand = Plus / Plus

                                                                       
Query: 105 gttcgacgtcatcgtggtgggcgcgggtatcatcggcagctgtgcggcgcacgcggcggc 164
           ||||||||| ||||||||||||||||| ||||| |||||||| || ||  |||||||| |
Sbjct: 119 gttcgacgtgatcgtggtgggcgcgggcatcatgggcagctgcgccgcctacgcggcgtc 178

                                                                       
Query: 165 gtcccggggcgcgagagtgctcctgctcgagcgcttcgacctgctgcaccagcgcggctc 224
            || || |||||| | ||||| || || ||||| ||||||||||| ||||| || |||||
Sbjct: 179 ctctcgtggcgcgcgcgtgctgctcctggagcggttcgacctgctccaccaccggggctc 238

                                                                       
Query: 225 gtcgcacggcgagtcccgcaccacccgccccacctacacgcggccgcagtacccgcccat 284
            |||||||||||||| ||||||| |||| |||||||| ||| | |||| |||||||||||
Sbjct: 239 ctcgcacggcgagtcgcgcaccatccgcgccacctacccgcaggcgcactacccgcccat 298

                                                                       
Query: 285 ggtccggctcgcgcaccgcctctggcacgacgccgagcgcgacgccggctacaccgtgct 344
           ||| || ||  | |  ||||||||| |||| ||| ||  ||||||||| |||||||||||
Sbjct: 299 ggtgcgcctgtcccggcgcctctgggacgaggcccaggccgacgccgggtacaccgtgct 358

                                      
Query: 345 cacgcccaccccgcacctcgacctggg 371
           |||||||||||||||||||||||||||
Sbjct: 359 cacgcccaccccgcacctcgacctggg 385
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>gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0019D02, complete sequence
          Length = 154692

 Score =  200 bits (101), Expect = 3e-48
 Identities = 232/275 (84%), Gaps = 3/275 (1%)
 Strand = Plus / Minus

                                                                         
Query: 106   ttcgacgtcatcgtggtgggcgcgggtatcatcggcagctgtgcggcgcacgcggcggcg 165
             |||||||| ||||||||||| || || ||||| |||||||| |||||| |||||||| ||
Sbjct: 29648 ttcgacgtgatcgtggtgggggccgggatcatgggcagctgcgcggcgtacgcggcgtcg 29589

                                                                         
Query: 166   tcccggggcg---cgagagtgctcctgctcgagcgcttcgacctgctgcaccagcgcggc 222
              |||| ||||   || | ||||| || || ||||| ||||||||||| ||||| || |||
Sbjct: 29588 acccgcggcggcgcgcgcgtgctgctcctggagcggttcgacctgctccaccaccggggc 29529

                                                                         
Query: 223   tcgtcgcacggcgagtcccgcaccacccgccccacctacacgcggccgcagtacccgccc 282
             ||||||||||||||||||||||||| |||| |||| ||| ||| | |||| |||||||||
Sbjct: 29528 tcgtcgcacggcgagtcccgcaccatccgcgccacgtacccgcaggcgcactacccgccc 29469

                                                                         
Query: 283   atggtccggctcgcgcaccgcctctggcacgacgccgagcgcgacgccggctacaccgtg 342
             |||||||| |||||    ||||||||| |||||||| |||||||||||||||||  ||||
Sbjct: 29468 atggtccgcctcgccgcgcgcctctgggacgacgcccagcgcgacgccggctaccgcgtg 29409

                                                
Query: 343   ctcacgcccaccccgcacctcgacctggggccccg 377
             ||||| || || |||||||||||| |||| |||||
Sbjct: 29408 ctcaccccgacgccgcacctcgacatgggcccccg 29374
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  200 bits (101), Expect = 3e-48
 Identities = 232/275 (84%), Gaps = 3/275 (1%)
 Strand = Plus / Minus

                                                                            
Query: 106      ttcgacgtcatcgtggtgggcgcgggtatcatcggcagctgtgcggcgcacgcggcggcg 165
                |||||||| ||||||||||| || || ||||| |||||||| |||||| |||||||| ||
Sbjct: 18984385 ttcgacgtgatcgtggtgggggccgggatcatgggcagctgcgcggcgtacgcggcgtcg 18984326

                                                                            
Query: 166      tcccggggcg---cgagagtgctcctgctcgagcgcttcgacctgctgcaccagcgcggc 222
                 |||| ||||   || | ||||| || || ||||| ||||||||||| ||||| || |||
Sbjct: 18984325 acccgcggcggcgcgcgcgtgctgctcctggagcggttcgacctgctccaccaccggggc 18984266

                                                                            
Query: 223      tcgtcgcacggcgagtcccgcaccacccgccccacctacacgcggccgcagtacccgccc 282
                ||||||||||||||||||||||||| |||| |||| ||| ||| | |||| |||||||||
Sbjct: 18984265 tcgtcgcacggcgagtcccgcaccatccgcgccacgtacccgcaggcgcactacccgccc 18984206

                                                                            
Query: 283      atggtccggctcgcgcaccgcctctggcacgacgccgagcgcgacgccggctacaccgtg 342
                |||||||| |||||    ||||||||| |||||||| |||||||||||||||||  ||||
Sbjct: 18984205 atggtccgcctcgccgcgcgcctctgggacgacgcccagcgcgacgccggctaccgcgtg 18984146

                                                   
Query: 343      ctcacgcccaccccgcacctcgacctggggccccg 377
                ||||| || || |||||||||||| |||| |||||
Sbjct: 18984145 ctcaccccgacgccgcacctcgacatgggcccccg 18984111
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>ref|NM_183735.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1245

 Score =  170 bits (86), Expect = 3e-39
 Identities = 203/242 (83%)
 Strand = Plus / Plus

                                                                       
Query: 106 ttcgacgtcatcgtggtgggcgcgggtatcatcggcagctgtgcggcgcacgcggcggcg 165
           |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 61  ttcgacgtcatcgtggtgggcgcgggcatcatgggcagctgcgcggcgcacgcggcggcg 120

                                                                       
Query: 166 tcccggggcgcgagagtgctcctgctcgagcgcttcgacctgctgcaccagcgcggctcg 225
           ||||| |||||| | |  || || || ||||||||||||||||| ||||| | |||||| 
Sbjct: 121 tcccgcggcgcgcgcgccctgctcctggagcgcttcgacctgctccaccacctcggctcc 180

                                                                       
Query: 226 tcgcacggcgagtcccgcaccacccgccccacctacacgcggccgcagtacccgcccatg 285
           |||||||||| ||| ||||||| ||||  | ||||| |   | |||| ||||||||||||
Sbjct: 181 tcgcacggcgcgtcgcgcaccatccgcgacgcctacgccaaggcgcactacccgcccatg 240

                                                                       
Query: 286 gtccggctcgcgcaccgcctctggcacgacgccgagcgcgacgccggctacaccgtgctc 345
           || || ||||| | ||||||||||  ||||||||||  |||  ||||||||  |||||||
Sbjct: 241 gtgcgcctcgcccgccgcctctgggccgacgccgaggccgagtccggctaccgcgtgctc 300

             
Query: 346 ac 347
           ||
Sbjct: 301 ac 302
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  170 bits (86), Expect = 3e-39
 Identities = 203/242 (83%)
 Strand = Plus / Minus

                                                                            
Query: 106      ttcgacgtcatcgtggtgggcgcgggtatcatcggcagctgtgcggcgcacgcggcggcg 165
                |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 11928456 ttcgacgtcatcgtggtgggcgcgggcatcatgggcagctgcgcggcgcacgcggcggcg 11928397

                                                                            
Query: 166      tcccggggcgcgagagtgctcctgctcgagcgcttcgacctgctgcaccagcgcggctcg 225
                ||||| |||||| | |  || || || ||||||||||||||||| ||||| | |||||| 
Sbjct: 11928396 tcccgcggcgcgcgcgccctgctcctggagcgcttcgacctgctccaccacctcggctcc 11928337

                                                                            
Query: 226      tcgcacggcgagtcccgcaccacccgccccacctacacgcggccgcagtacccgcccatg 285
                |||||||||| ||| ||||||| ||||  | ||||| |   | |||| ||||||||||||
Sbjct: 11928336 tcgcacggcgcgtcgcgcaccatccgcgacgcctacgccaaggcgcactacccgcccatg 11928277

                                                                            
Query: 286      gtccggctcgcgcaccgcctctggcacgacgccgagcgcgacgccggctacaccgtgctc 345
                || || ||||| | ||||||||||  ||||||||||  |||  ||||||||  |||||||
Sbjct: 11928276 gtgcgcctcgcccgccgcctctgggccgacgccgaggccgagtccggctaccgcgtgctc 11928217

                  
Query: 346      ac 347
                ||
Sbjct: 11928216 ac 11928215
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>dbj|AP003535.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1012D10
          Length = 168267

 Score =  170 bits (86), Expect = 3e-39
 Identities = 203/242 (83%)
 Strand = Plus / Minus

                                                                          
Query: 106    ttcgacgtcatcgtggtgggcgcgggtatcatcggcagctgtgcggcgcacgcggcggcg 165
              |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 140741 ttcgacgtcatcgtggtgggcgcgggcatcatgggcagctgcgcggcgcacgcggcggcg 140682

                                                                          
Query: 166    tcccggggcgcgagagtgctcctgctcgagcgcttcgacctgctgcaccagcgcggctcg 225
              ||||| |||||| | |  || || || ||||||||||||||||| ||||| | |||||| 
Sbjct: 140681 tcccgcggcgcgcgcgccctgctcctggagcgcttcgacctgctccaccacctcggctcc 140622

                                                                          
Query: 226    tcgcacggcgagtcccgcaccacccgccccacctacacgcggccgcagtacccgcccatg 285
              |||||||||| ||| ||||||| ||||  | ||||| |   | |||| ||||||||||||
Sbjct: 140621 tcgcacggcgcgtcgcgcaccatccgcgacgcctacgccaaggcgcactacccgcccatg 140562

                                                                          
Query: 286    gtccggctcgcgcaccgcctctggcacgacgccgagcgcgacgccggctacaccgtgctc 345
              || || ||||| | ||||||||||  ||||||||||  |||  ||||||||  |||||||
Sbjct: 140561 gtgcgcctcgcccgccgcctctgggccgacgccgaggccgagtccggctaccgcgtgctc 140502

                
Query: 346    ac 347
              ||
Sbjct: 140501 ac 140500
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>gb|BT018493.1| Zea mays clone EL01N0425H03.d mRNA sequence
          Length = 1475

 Score =  147 bits (74), Expect = 4e-32
 Identities = 212/258 (82%)
 Strand = Plus / Plus

                                                                       
Query: 106 ttcgacgtcatcgtggtgggcgcgggtatcatcggcagctgtgcggcgcacgcggcggcg 165
           ||||||||||||||||||||||| || ||||| ||||||||  ||||||||||||| |||
Sbjct: 124 ttcgacgtcatcgtggtgggcgccggcatcatgggcagctgcacggcgcacgcggcagcg 183

                                                                       
Query: 166 tcccggggcgcgagagtgctcctgctcgagcgcttcgacctgctgcaccagcgcggctcg 225
           || || |||||  | || || ||||| ||||||||||||||||| |||| ||  ||||| 
Sbjct: 184 tctcgcggcgcccgcgtcctgctgctggagcgcttcgacctgctccacccgctgggctcc 243

                                                                       
Query: 226 tcgcacggcgagtcccgcaccacccgccccacctacacgcggccgcagtacccgcccatg 285
           ||||||||||| ||||||| || ||||  | ||||| ||| ||||| |||||  | ||||
Sbjct: 244 tcgcacggcgactcccgcatcatccgcgacgcctacgcgcagccgcggtacctccgcatg 303

                                                                       
Query: 286 gtccggctcgcgcaccgcctctggcacgacgccgagcgcgacgccggctacaccgtgctc 345
           || || ||||| | ||||||||||  || |||||||  ||| |||||||||  |||||||
Sbjct: 304 gtgcgcctcgcccgccgcctctgggccgccgccgaggccgaggccggctaccgcgtgctc 363

                             
Query: 346 acgcccaccccgcacctc 363
           || || || |||||||||
Sbjct: 364 accccgacgccgcacctc 381
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 179/222 (80%)
 Strand = Plus / Plus

                                                                            
Query: 199      ttcgacctgctgcaccagcgcggctcgtcgcacggcgagtcccgcaccacccgccccacc 258
                ||||||||||| ||||| |||||||||||||||||||||||||||  || |||| |||| 
Sbjct: 21903664 ttcgacctgctccaccaccgcggctcgtcgcacggcgagtcccgcggcatccgcgccacg 21903723

                                                                            
Query: 259      tacacgcggccgcagtacccgcccatggtccggctcgcgcaccgcctctggcacgacgcc 318
                ||| ||| | ||| ||||||||||||||| || |||||    || ||||||  | |||||
Sbjct: 21903724 tacccgcaggcgcggtacccgcccatggtgcgcctcgccgcgcggctctggggcaacgcc 21903783

                                                                            
Query: 319      gagcgcgacgccggctacaccgtgctcacgcccaccccgcacctcgacctggggccccga 378
                |||  ||| || ||||||  ||||||||| || || |||||||||||| |||| || || 
Sbjct: 21903784 gaggccgaggcgggctaccgcgtgctcaccccgacgccgcacctcgacatgggcccgcgc 21903843

                                                          
Query: 379      gacgggccggccttcgtcgccgccatcgccaacggcggcgcc 420
                | ||  |||||| ||  ||||||||||   ||||||||||||
Sbjct: 21903844 gccgacccggccctccgcgccgccatccagaacggcggcgcc 21903885



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                            
Query: 106      ttcgacgtcatcgtggtgggcgcgggtatcatcggcagctgtgcggcgcacgcggcggcg 165
                |||||||| |||||||||||||  || ||||| |||||||| |||||| |||| ||||||
Sbjct: 21903553 ttcgacgtgatcgtggtgggcggcggcatcatgggcagctgcgcggcgtacgccgcggcg 21903612

                  
Query: 166      tc 167
                ||
Sbjct: 21903613 tc 21903614
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 179/222 (80%)
 Strand = Plus / Plus

                                                                            
Query: 199      ttcgacctgctgcaccagcgcggctcgtcgcacggcgagtcccgcaccacccgccccacc 258
                ||||||||||| ||||| |||||||||||||||||||||||||||  || |||| |||| 
Sbjct: 21832009 ttcgacctgctccaccaccgcggctcgtcgcacggcgagtcccgcggcatccgcgccacg 21832068

                                                                            
Query: 259      tacacgcggccgcagtacccgcccatggtccggctcgcgcaccgcctctggcacgacgcc 318
                ||| ||| | ||| ||||||||||||||| || |||||    || ||||||  | |||||
Sbjct: 21832069 tacccgcaggcgcggtacccgcccatggtgcgcctcgccgcgcggctctggggcaacgcc 21832128

                                                                            
Query: 319      gagcgcgacgccggctacaccgtgctcacgcccaccccgcacctcgacctggggccccga 378
                |||  ||| || ||||||  ||||||||| || || |||||||||||| |||| || || 
Sbjct: 21832129 gaggccgaggcgggctaccgcgtgctcaccccgacgccgcacctcgacatgggcccgcgc 21832188

                                                          
Query: 379      gacgggccggccttcgtcgccgccatcgccaacggcggcgcc 420
                | ||  |||||| ||  ||||||||||   ||||||||||||
Sbjct: 21832189 gccgacccggccctccgcgccgccatccagaacggcggcgcc 21832230



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                            
Query: 106      ttcgacgtcatcgtggtgggcgcgggtatcatcggcagctgtgcggcgcacgcggcggcg 165
                |||||||| |||||||||||||  || ||||| |||||||| |||||| |||| ||||||
Sbjct: 21831898 ttcgacgtgatcgtggtgggcggcggcatcatgggcagctgcgcggcgtacgccgcggcg 21831957

                  
Query: 166      tc 167
                ||
Sbjct: 21831958 tc 21831959
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>emb|AL831807.7|CNS08CAK Oryza sativa chromosome 12, . BAC OSJNBa0062E22 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 138308

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 179/222 (80%)
 Strand = Plus / Plus

                                                                         
Query: 199   ttcgacctgctgcaccagcgcggctcgtcgcacggcgagtcccgcaccacccgccccacc 258
             ||||||||||| ||||| |||||||||||||||||||||||||||  || |||| |||| 
Sbjct: 9792  ttcgacctgctccaccaccgcggctcgtcgcacggcgagtcccgcggcatccgcgccacg 9851

                                                                         
Query: 259   tacacgcggccgcagtacccgcccatggtccggctcgcgcaccgcctctggcacgacgcc 318
             ||| ||| | ||| ||||||||||||||| || |||||    || ||||||  | |||||
Sbjct: 9852  tacccgcaggcgcggtacccgcccatggtgcgcctcgccgcgcggctctggggcaacgcc 9911

                                                                         
Query: 319   gagcgcgacgccggctacaccgtgctcacgcccaccccgcacctcgacctggggccccga 378
             |||  ||| || ||||||  ||||||||| || || |||||||||||| |||| || || 
Sbjct: 9912  gaggccgaggcgggctaccgcgtgctcaccccgacgccgcacctcgacatgggcccgcgc 9971

                                                       
Query: 379   gacgggccggccttcgtcgccgccatcgccaacggcggcgcc 420
             | ||  |||||| ||  ||||||||||   ||||||||||||
Sbjct: 9972  gccgacccggccctccgcgccgccatccagaacggcggcgcc 10013



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                        
Query: 106  ttcgacgtcatcgtggtgggcgcgggtatcatcggcagctgtgcggcgcacgcggcggcg 165
            |||||||| |||||||||||||  || ||||| |||||||| |||||| |||| ||||||
Sbjct: 9681 ttcgacgtgatcgtggtgggcggcggcatcatgggcagctgcgcggcgtacgccgcggcg 9740

              
Query: 166  tc 167
            ||
Sbjct: 9741 tc 9742
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>emb|AL732647.4|CNS08C9M Oryza sativa chromosome 12, . BAC OSJNBb0087J18 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 121592

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 179/222 (80%)
 Strand = Plus / Minus

                                                                         
Query: 199   ttcgacctgctgcaccagcgcggctcgtcgcacggcgagtcccgcaccacccgccccacc 258
             ||||||||||| ||||| |||||||||||||||||||||||||||  || |||| |||| 
Sbjct: 19668 ttcgacctgctccaccaccgcggctcgtcgcacggcgagtcccgcggcatccgcgccacg 19609

                                                                         
Query: 259   tacacgcggccgcagtacccgcccatggtccggctcgcgcaccgcctctggcacgacgcc 318
             ||| ||| | ||| ||||||||||||||| || |||||    || ||||||  | |||||
Sbjct: 19608 tacccgcaggcgcggtacccgcccatggtgcgcctcgccgcgcggctctggggcaacgcc 19549

                                                                         
Query: 319   gagcgcgacgccggctacaccgtgctcacgcccaccccgcacctcgacctggggccccga 378
             |||  ||| || ||||||  ||||||||| || || |||||||||||| |||| || || 
Sbjct: 19548 gaggccgaggcgggctaccgcgtgctcaccccgacgccgcacctcgacatgggcccgcgc 19489

                                                       
Query: 379   gacgggccggccttcgtcgccgccatcgccaacggcggcgcc 420
             | ||  |||||| ||  ||||||||||   ||||||||||||
Sbjct: 19488 gccgacccggccctccgcgccgccatccagaacggcggcgcc 19447



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                         
Query: 106   ttcgacgtcatcgtggtgggcgcgggtatcatcggcagctgtgcggcgcacgcggcggcg 165
             |||||||| |||||||||||||  || ||||| |||||||| |||||| |||| ||||||
Sbjct: 19779 ttcgacgtgatcgtggtgggcggcggcatcatgggcagctgcgcggcgtacgccgcggcg 19720

               
Query: 166   tc 167
             ||
Sbjct: 19719 tc 19718
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>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence
          Length = 491611

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 113    tcatcgtggtgggcgcgggtatcatcggca 142
              ||||||| || |||||||||||||||||||
Sbjct: 289081 tcatcgttgtcggcgcgggtatcatcggca 289052
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>gb|AE005903.1| Caulobacter crescentus CB15 section 229 of 359 of the complete genome
          Length = 11684

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 387  ggccttcgtcgccgccatcgcc 408
            ||||||||||||||||||||||
Sbjct: 1117 ggccttcgtcgccgccatcgcc 1096
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 314     acgccgagcgcgacgccggcta 335
               ||||||||||||||||||||||
Sbjct: 2963367 acgccgagcgcgacgccggcta 2963388
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>gb|AE005043.1| Halobacterium sp. NRC-1 section 74 of 170 of the complete genome
          Length = 11677

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 97  gagcgctcgttcgacgtcatcg 118
           ||||||||||||||||||||||
Sbjct: 235 gagcgctcgttcgacgtcatcg 214
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>emb|X64521.1|HHFEROXI H.halobium gene for pyruvate:ferredoxin oxidoreductase
          Length = 3190

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 97   gagcgctcgttcgacgtcatcg 118
            ||||||||||||||||||||||
Sbjct: 2960 gagcgctcgttcgacgtcatcg 2981
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 191     tcgagcgcttcgacctgctgc 211
               |||||||||||||||||||||
Sbjct: 2502990 tcgagcgcttcgacctgctgc 2502970
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 396     cgccgccatcgccaacggcggcgcc 420
               |||||||||||||||||||| ||||
Sbjct: 3019819 cgccgccatcgccaacggcgacgcc 3019843
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>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14
          Length = 307550

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 396    cgccgccatcgccaacggcggcgcc 420
              |||||||||||||||||||| ||||
Sbjct: 164018 cgccgccatcgccaacggcgacgcc 164042
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>emb|AJ811516.1| Uncultured bacterium partial nirS gene for putative dissimilatory
           nitrite reductase, clone AC100-108
          Length = 839

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 324 cgacgccggctacaccgtgct 344
           |||||||||||||||||||||
Sbjct: 629 cgacgccggctacaccgtgct 649
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>emb|AJ811514.1| Uncultured bacterium partial nirS gene for putative dissimilatory
           nitrite reductase, clone AC100-102
          Length = 839

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 324 cgacgccggctacaccgtgct 344
           |||||||||||||||||||||
Sbjct: 629 cgacgccggctacaccgtgct 649
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>emb|AJ811513.1| Uncultured bacterium partial nirS gene for putative dissimilatory
           nitrite reductase, clone AC100-95
          Length = 839

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 324 cgacgccggctacaccgtgct 344
           |||||||||||||||||||||
Sbjct: 629 cgacgccggctacaccgtgct 649
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>emb|AJ811512.1| Uncultured bacterium partial nirS gene for putative dissimilatory
           nitrite reductase, clone AC100-94
          Length = 839

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 324 cgacgccggctacaccgtgct 344
           |||||||||||||||||||||
Sbjct: 629 cgacgccggctacaccgtgct 649
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>emb|AJ811511.1| Uncultured bacterium partial nirS gene for putative dissimilatory
           nitrite reductase, clone AC100-93
          Length = 839

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 324 cgacgccggctacaccgtgct 344
           |||||||||||||||||||||
Sbjct: 629 cgacgccggctacaccgtgct 649
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>emb|AJ811510.1| Uncultured bacterium partial nirS gene for putative dissimilatory
           nitrite reductase, clone AC100-91A
          Length = 839

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 324 cgacgccggctacaccgtgct 344
           |||||||||||||||||||||
Sbjct: 629 cgacgccggctacaccgtgct 649
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>emb|AJ811508.1| Uncultured bacterium partial nirS gene for putative dissimilatory
           nitrite reductase, clone AC100-83
          Length = 839

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 324 cgacgccggctacaccgtgct 344
           |||||||||||||||||||||
Sbjct: 629 cgacgccggctacaccgtgct 649
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>emb|AJ811506.1| Uncultured bacterium partial nirS gene for putative dissimilatory
           nitrite reductase, clone AC100-78
          Length = 839

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 324 cgacgccggctacaccgtgct 344
           |||||||||||||||||||||
Sbjct: 629 cgacgccggctacaccgtgct 649
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>emb|AJ811504.1| Uncultured bacterium partial nirS gene for putative dissimilatory
           nitrite reductase, clone AC100-66
          Length = 839

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 324 cgacgccggctacaccgtgct 344
           |||||||||||||||||||||
Sbjct: 629 cgacgccggctacaccgtgct 649
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>emb|AJ811503.1| Uncultured bacterium partial nirS gene for putative dissimilatory
           nitrite reductase, clone AC100-65
          Length = 839

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 324 cgacgccggctacaccgtgct 344
           |||||||||||||||||||||
Sbjct: 629 cgacgccggctacaccgtgct 649
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>emb|AJ811501.1| Uncultured bacterium partial nirS gene for putative dissimilatory
           nitrite reductase, clone AC100-62A
          Length = 839

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 324 cgacgccggctacaccgtgct 344
           |||||||||||||||||||||
Sbjct: 629 cgacgccggctacaccgtgct 649
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>emb|AJ811500.1| Uncultured bacterium partial nirS gene for putative dissimilatory
           nitrite reductase, clone AC100-62
          Length = 839

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 324 cgacgccggctacaccgtgct 344
           |||||||||||||||||||||
Sbjct: 629 cgacgccggctacaccgtgct 649
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>emb|AJ811499.1| Uncultured bacterium partial nirS gene for putative dissimilatory
           nitrite reductase, clone AC100-60
          Length = 839

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 324 cgacgccggctacaccgtgct 344
           |||||||||||||||||||||
Sbjct: 629 cgacgccggctacaccgtgct 649
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>emb|AJ811498.1| Uncultured bacterium partial nirS gene for putative dissimilatory
           nitrite reductase, clone AC100-58
          Length = 839

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 324 cgacgccggctacaccgtgct 344
           |||||||||||||||||||||
Sbjct: 629 cgacgccggctacaccgtgct 649
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>emb|AJ811496.1| Uncultured bacterium partial nirS gene for putative dissimilatory
           nitrite reductase, clone AC100-50
          Length = 839

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 324 cgacgccggctacaccgtgct 344
           |||||||||||||||||||||
Sbjct: 629 cgacgccggctacaccgtgct 649
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>emb|AJ811495.1| Uncultured bacterium partial nirS gene for putative dissimilatory
           nitrite reductase, clone AC100-48
          Length = 839

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 324 cgacgccggctacaccgtgct 344
           |||||||||||||||||||||
Sbjct: 629 cgacgccggctacaccgtgct 649
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>emb|AJ811494.1| Uncultured bacterium partial nirS gene for putative dissimilatory
           nitrite reductase, clone AC100-45
          Length = 839

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 324 cgacgccggctacaccgtgct 344
           |||||||||||||||||||||
Sbjct: 629 cgacgccggctacaccgtgct 649
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>emb|AJ811490.1| Uncultured bacterium partial nirS gene for putative dissimilatory
           nitrite reductase, clone AC100-39
          Length = 839

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 324 cgacgccggctacaccgtgct 344
           |||||||||||||||||||||
Sbjct: 629 cgacgccggctacaccgtgct 649
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>emb|AJ811488.1| Uncultured bacterium partial nirS gene for putative dissimilatory
           nitrite reductase, clone AC100-37
          Length = 839

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 324 cgacgccggctacaccgtgct 344
           |||||||||||||||||||||
Sbjct: 629 cgacgccggctacaccgtgct 649
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>emb|AJ811485.1| Uncultured bacterium partial nirS gene for putative dissimilatory
           nitrite reductase, clone AC100-31
          Length = 839

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 324 cgacgccggctacaccgtgct 344
           |||||||||||||||||||||
Sbjct: 629 cgacgccggctacaccgtgct 649
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>emb|AJ811483.1| Uncultured bacterium partial nirS gene for putative dissimilatory
           nitrite reductase, clone AC100-24
          Length = 839

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 324 cgacgccggctacaccgtgct 344
           |||||||||||||||||||||
Sbjct: 629 cgacgccggctacaccgtgct 649
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>emb|AJ811481.1| Uncultured bacterium partial nirS gene for putative dissimilatory
           nitrite reductase, clone AC100-17
          Length = 839

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 324 cgacgccggctacaccgtgct 344
           |||||||||||||||||||||
Sbjct: 629 cgacgccggctacaccgtgct 649
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 402     catcgccaacggcggcgccagcgagctcg 430
               |||||||| ||||||||||| ||||||||
Sbjct: 1602797 catcgccaccggcggcgccaccgagctcg 1602825
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>emb|BX024714.1|CNS08R8E Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA37DD05 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 822

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 260 acacgcggccgcagtacccgcccat 284
           |||||||||||| ||||||||||||
Sbjct: 783 acacgcggccgccgtacccgcccat 807
to top
>emb|BX014345.1|CNS08J8D Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA21CC07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 955

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 260 acacgcggccgcagtacccgcccat 284
           |||||||||||| ||||||||||||
Sbjct: 827 acacgcggccgccgtacccgcccat 803
to top
>emb|BX014344.1|CNS08J8C Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA21CC07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 823

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 260 acacgcggccgcagtacccgcccat 284
           |||||||||||| ||||||||||||
Sbjct: 688 acacgcggccgccgtacccgcccat 712
to top
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 379    gacgggccggccttcgtcgccgcca 403
              ||||| |||||||||||||||||||
Sbjct: 444191 gacggcccggccttcgtcgccgcca 444215
to top
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13
          Length = 346051

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 396    cgccgccatcgccaacggcggcgcc 420
              |||||||||||||||||||| ||||
Sbjct: 251846 cgccgccatcgccaacggcgacgcc 251870
to top
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16
          Length = 348624

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 384    gccggccttcgtcgccgccat 404
              |||||||||||||||||||||
Sbjct: 134149 gccggccttcgtcgccgccat 134129
to top
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14
          Length = 348014

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 313    gacgccgagcgcgacgccggc 333
              |||||||||||||||||||||
Sbjct: 134950 gacgccgagcgcgacgccggc 134930
to top
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14
          Length = 348866

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 384    gccggccttcgtcgccgccat 404
              |||||||||||||||||||||
Sbjct: 246519 gccggccttcgtcgccgccat 246499
to top
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12
          Length = 348934

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 313   gacgccgagcgcgacgccggc 333
             |||||||||||||||||||||
Sbjct: 57310 gacgccgagcgcgacgccggc 57290
to top
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12
          Length = 347071

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 384    gccggccttcgtcgccgccat 404
              |||||||||||||||||||||
Sbjct: 231177 gccggccttcgtcgccgccat 231157
to top
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29
          Length = 310550

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 156    cgcggcggcgtcccggggcgc 176
              |||||||||||||||||||||
Sbjct: 218561 cgcggcggcgtcccggggcgc 218581
to top
>emb|AJ440494.1|IBA440494 Pseudomonas sp. BA2.5 partial nirS gene for nitrite reductase,
           isolate BA2.5
          Length = 830

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 324 cgacgccggctacaccgtgct 344
           |||||||||||||||||||||
Sbjct: 625 cgacgccggctacaccgtgct 645
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 108    cgacgtcatcgtggtgggcgcgggt 132
              ||||||||||||||| |||||||||
Sbjct: 623620 cgacgtcatcgtggtcggcgcgggt 623644
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 399    cgccatcgccaacggcggcgc 419
              |||||||||||||||||||||
Sbjct: 545549 cgccatcgccaacggcggcgc 545569



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 390    cttcgtcgccgccatcgcca 409
              ||||||||||||||||||||
Sbjct: 318756 cttcgtcgccgccatcgcca 318775
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 107     tcgacgtcatcgtggtgggcg 127
               |||||||||||||||||||||
Sbjct: 2656307 tcgacgtcatcgtggtgggcg 2656287



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 186     cctgctcgagcgcttcgacct 206
               |||||||||||||||||||||
Sbjct: 1415183 cctgctcgagcgcttcgacct 1415163



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 182     tgctcctgctcgagcgcttcgacc 205
               |||||| |||||||||||||||||
Sbjct: 3738193 tgctcccgctcgagcgcttcgacc 3738216



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 107     tcgacgtcatcgtggtgggcgcgg 130
               ||||||||| ||||||||||||||
Sbjct: 1508873 tcgacgtcaccgtggtgggcgcgg 1508896
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 149     cggcgcacgcggcggcgtccc 169
               |||||||||||||||||||||
Sbjct: 4665358 cggcgcacgcggcggcgtccc 4665338



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 108     cgacgtcatcgtggtgggcgcggg 131
               |||||||||||||||||| |||||
Sbjct: 3121309 cgacgtcatcgtggtgggggcggg 3121332



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 399     cgccatcgccaacggcggcg 418
               ||||||||||||||||||||
Sbjct: 1289702 cgccatcgccaacggcggcg 1289721



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 381    cgggccggccttcgtcgccgccatcgcc 408
              |||||| || ||||||||||||||||||
Sbjct: 892709 cgggcccgcgttcgtcgccgccatcgcc 892682
to top
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 108     cgacgtcatcgtggtgggcgcgggtatcatcgg 140
               |||||||||||||||||||| ||| ||| ||||
Sbjct: 1723316 cgacgtcatcgtggtgggcgggggcatcgtcgg 1723348
to top
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 108     cgacgtcatcgtggtgggcgcggg 131
               |||||||||||||||||| |||||
Sbjct: 3993457 cgacgtcatcgtggtgggggcggg 3993434
to top
>ref|XM_472427.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1254

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 156 cgcggcggcgtcccggggcg 175
           ||||||||||||||||||||
Sbjct: 132 cgcggcggcgtcccggggcg 151
to top
>gb|DQ215529.1| Taeniopygia guttata clone 0061P0019C12 RIKEN cDNA 2210402C18
           variant 2-like mRNA, complete sequence
          Length = 931

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 80  tggctgcgccgctggccgagcgct 103
           |||| |||||||||||||||||||
Sbjct: 228 tggccgcgccgctggccgagcgct 251
to top
>gb|DQ215528.1| Taeniopygia guttata clone 0058P0032A06 RIKEN cDNA 2210402C18
           variant 1-like mRNA, complete sequence
          Length = 1505

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 80  tggctgcgccgctggccgagcgct 103
           |||| |||||||||||||||||||
Sbjct: 283 tggccgcgccgctggccgagcgct 306
to top
>ref|XM_474606.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 918

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 389 ccttcgtcgccgccatcgcc 408
           ||||||||||||||||||||
Sbjct: 835 ccttcgtcgccgccatcgcc 816
to top
>gb|AY023162.1| Oryza sativa microsatellite MRG5487 containing (GCG)X8, genomic
           sequence
          Length = 224

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 389 ccttcgtcgccgccatcgcc 408
           ||||||||||||||||||||
Sbjct: 8   ccttcgtcgccgccatcgcc 27
to top
>gb|AY632751.1| Mycobacterium avium esterase (lipL) gene, complete cds
          Length = 1287

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 399 cgccatcgccaacggcggcg 418
           ||||||||||||||||||||
Sbjct: 888 cgccatcgccaacggcggcg 907
to top
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 312     cgacgccgagcgcgacgccg 331
               ||||||||||||||||||||
Sbjct: 2352202 cgacgccgagcgcgacgccg 2352221
to top
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 388    gccttcgtcgccgccatcgc 407
              ||||||||||||||||||||
Sbjct: 247271 gccttcgtcgccgccatcgc 247252
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    cgacgccgagcgcgacgccg 331
              ||||||||||||||||||||
Sbjct: 392511 cgacgccgagcgcgacgccg 392530
to top
>ref|XM_983991.1| PREDICTED: Mus musculus SRY-box containing gene 30 (Sox30), mRNA
          Length = 2196

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 481 cggaggggtgggccgcggcg 500
           ||||||||||||||||||||
Sbjct: 300 cggaggggtgggccgcggcg 281
to top
>ref|XM_756268.1| Ustilago maydis 521 hypothetical protein (UM05214.1) partial mRNA
          Length = 1656

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 192 cgagcgcttcgacctgctgc 211
           ||||||||||||||||||||
Sbjct: 586 cgagcgcttcgacctgctgc 567
to top
>gb|AC105404.4| Mus musculus BAC clone RP24-112M13 from chromosome 16, complete
             sequence
          Length = 127531

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 53    cacagacacaggaacatcaaccaa 76
             ||||||||||||| ||||||||||
Sbjct: 33226 cacagacacaggaccatcaaccaa 33203
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    cgacgccgagcgcgacgccg 331
              ||||||||||||||||||||
Sbjct: 202235 cgacgccgagcgcgacgccg 202254
to top
>gb|AC163293.4| Mus musculus BAC clone RP23-156J21 from chromosome 16, complete
             sequence
          Length = 205834

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 53    cacagacacaggaacatcaaccaa 76
             ||||||||||||| ||||||||||
Sbjct: 61793 cacagacacaggaccatcaaccaa 61816
to top
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29
          Length = 248550

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 108    cgacgtcatcgtggtgggcgcggg 131
              |||||||||||| |||||||||||
Sbjct: 147104 cgacgtcatcgtcgtgggcgcggg 147127
to top
>emb|AL663013.4|OSJN00214 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089K06,
             complete sequence
          Length = 129608

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 389   ccttcgtcgccgccatcgcc 408
             ||||||||||||||||||||
Sbjct: 37042 ccttcgtcgccgccatcgcc 37061
to top
>emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12,
             complete sequence
          Length = 116952

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   cgcggcggcgtcccggggcg 175
             ||||||||||||||||||||
Sbjct: 74460 cgcggcggcgtcccggggcg 74441
to top
>emb|AJ576039.1|GWE576039 Gordonia westfalica strain DSM44215T plasmid pKB1 complete genome
          Length = 101016

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 385   ccggccttcgtcgccgccatcgcc 408
             |||||||||||||| |||||||||
Sbjct: 25070 ccggccttcgtcgcagccatcgcc 25093
to top
>emb|AL645948.10| Mouse DNA sequence from clone RP23-298M7 on chromosome 11 Contains an H+
              transporting ATP synthase mitochondrial F0 complex subunit
              g (Atp5l) pseudogene, a ferritin light chain 1 (Ftl1)
              pseudogene, three novel genes, the gene for a novel ENTH
              domain containing protein, the 5' end of the Sox30 gene for
              SRY-box containing gene 30 and three Cpg islands, complete
              sequence
          Length = 207877

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 481    cggaggggtgggccgcggcg 500
              ||||||||||||||||||||
Sbjct: 204632 cggaggggtgggccgcggcg 204613
to top
>emb|AL669928.8| Mouse DNA sequence from clone RP23-76F22 on chromosome 11 Contains a
             pseudogene similar to part of a member of the tropomyosin
             gene family, complete sequence
          Length = 100326

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    agcacagacacaggaacatc 70
             ||||||||||||||||||||
Sbjct: 93703 agcacagacacaggaacatc 93722
to top
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 79      atggctgcgccgctggccga 98
               ||||||||||||||||||||
Sbjct: 2063893 atggctgcgccgctggccga 2063912
to top
>gb|AE012510.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 418
            of 460 of the complete genome
          Length = 10648

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 108  cgacgtcatcgtggtgggcgcggg 131
            ||||| ||||||||||||||||||
Sbjct: 4148 cgacgccatcgtggtgggcgcggg 4125
to top
>gb|AC012101.7| Homo sapiens chromosome 18, clone RP11-396D4, complete sequence
          Length = 168965

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     gctctgcctcactctccacc 25
             ||||||||||||||||||||
Sbjct: 30000 gctctgcctcactctccacc 30019
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 108     cgacgtcatcgtggtgggcgcggg 131
               ||||| ||||||||||||||||||
Sbjct: 4696683 cgacgccatcgtggtgggcgcggg 4696660
to top
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 311     acgacgccgagcgcgacgcc 330
               ||||||||||||||||||||
Sbjct: 1246290 acgacgccgagcgcgacgcc 1246271
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 156      cgcggcggcgtcccggggcg 175
                ||||||||||||||||||||
Sbjct: 20563832 cgcggcggcgtcccggggcg 20563813



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 389     ccttcgtcgccgccatcgcc 408
               ||||||||||||||||||||
Sbjct: 4646909 ccttcgtcgccgccatcgcc 4646928
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 392      tcgtcgccgccatcgccaac 411
                ||||||||||||||||||||
Sbjct: 28801657 tcgtcgccgccatcgccaac 28801638



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 392      tcgtcgccgccatcgccaac 411
                ||||||||||||||||||||
Sbjct: 28797481 tcgtcgccgccatcgccaac 28797500
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 383      ggccggccttcgtcgccgcc 402
                ||||||||||||||||||||
Sbjct: 14550841 ggccggccttcgtcgccgcc 14550822
to top
>gb|AF197466.1|AF197466 Pseudomonas fluorescens NirP (nirP), NirO (nirO), ATP/GTP binding
            protein (nirQ), cd1 nitrite reductase (nirS), and
            cytochrome c-551 (nirM) genes, complete cds
          Length = 3890

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 325  gacgccggctacaccgtgct 344
            ||||||||||||||||||||
Sbjct: 3280 gacgccggctacaccgtgct 3299
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 315     cgccgagcgcgacgccggct 334
               ||||||||||||||||||||
Sbjct: 4128940 cgccgagcgcgacgccggct 4128959
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 104     cgttcgacgtcatcgtggtgggcg 127
               |||||||||| |||||||||||||
Sbjct: 2510316 cgttcgacgtgatcgtggtgggcg 2510339



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 109    gacgtcatcgtggtgggcgcgggtatca 136
              |||||||||||||| |||||||| ||||
Sbjct: 678026 gacgtcatcgtggtcggcgcgggcatca 678053
to top
>gb|AY005801.1| Mus musculus Sox-30 mRNA, complete cds
          Length = 3074

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 481 cggaggggtgggccgcggcg 500
           ||||||||||||||||||||
Sbjct: 85  cggaggggtgggccgcggcg 66
to top
>gb|AC116003.7| Homo sapiens chromosome 18, clone RP11-321M21, complete sequence
          Length = 189167

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      gctctgcctcactctccacc 25
              ||||||||||||||||||||
Sbjct: 102265 gctctgcctcactctccacc 102284
to top
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 109     gacgtcatcgtggtgggcgcgggt 132
               |||||| |||||||||||||||||
Sbjct: 1157312 gacgtcctcgtggtgggcgcgggt 1157289
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>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0028E05
          Length = 157631

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 392    tcgtcgccgccatcgccaac 411
              ||||||||||||||||||||
Sbjct: 109432 tcgtcgccgccatcgccaac 109413



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 392    tcgtcgccgccatcgccaac 411
              ||||||||||||||||||||
Sbjct: 105256 tcgtcgccgccatcgccaac 105275
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>dbj|AP005653.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0075E08
          Length = 130947

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 383   ggccggccttcgtcgccgcc 402
             ||||||||||||||||||||
Sbjct: 54857 ggccggccttcgtcgccgcc 54838
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>dbj|AK067581.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013113N12, full
           insert sequence
          Length = 2176

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 156 cgcggcggcgtcccggggcg 175
           ||||||||||||||||||||
Sbjct: 306 cgcggcggcgtcccggggcg 325
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 187     ctgctcgagcgcttcgacctgctg 210
               |||| |||||||||||||||||||
Sbjct: 1772537 ctgcgcgagcgcttcgacctgctg 1772514



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 194     agcgcttcgacctgctgcac 213
               ||||||||||||||||||||
Sbjct: 1648791 agcgcttcgacctgctgcac 1648772
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 394     gtcgccgccatcgccaacggcggcgcca 421
               ||||| ||||||||||| ||||||||||
Sbjct: 1909010 gtcgcggccatcgccaaaggcggcgcca 1908983
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    cgacgccgagcgcgacgccg 331
              ||||||||||||||||||||
Sbjct: 186721 cgacgccgagcgcgacgccg 186740
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 109    gacgtcatcgtggtgggcgcgggt 132
              |||||| |||||||||||||||||
Sbjct: 831264 gacgtcctcgtggtgggcgcgggt 831241
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>ref|NM_173384.1| Mus musculus SRY-box containing gene 30 (Sox30), mRNA
          Length = 3074

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 481 cggaggggtgggccgcggcg 500
           ||||||||||||||||||||
Sbjct: 85  cggaggggtgggccgcggcg 66
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>gb|U09865.1|AEU09865 Alcaligenes eutrophus pyruvate dehydrogenase (pdhA), dihydrolipoamide
            acetyltransferase (pdhB), dihydrolipoamide  dehydrogenase
            (pdhL), and ORF3 genes, complete cds
          Length = 7291

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 191  tcgagcgcttcgacctgctgcacc 214
            ||||||||||| ||||||||||||
Sbjct: 2357 tcgagcgcttcaacctgctgcacc 2380


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,039,613
Number of Sequences: 3902068
Number of extensions: 3039613
Number of successful extensions: 75657
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69654
Number of HSP's gapped (non-prelim): 5989
length of query: 504
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 482
effective length of database: 17,147,199,772
effective search space: 8264950290104
effective search space used: 8264950290104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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