ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast12a02 |
|---|---|
| Clone Library Name | barley_pub |
>APX2_ORYSA (Q9FE01) L-ascorbate peroxidase 2, cytosolic (EC 1.11.1.11) (APXb)| Length = 251 Score = 65.5 bits (158), Expect = 4e-11 Identities = 31/44 (70%), Positives = 31/44 (70%) Frame = +2 Query: 98 KCYPTVSDEYXXXXXXXXXXXXGLIAEKNCAPLMLRLAWHSAGT 229 K YPTVSDEY GLIAEKNCAPLMLRLAWHSAGT Sbjct: 4 KSYPTVSDEYLAAVGKAKRKLRGLIAEKNCAPLMLRLAWHSAGT 47
>APX1_ARATH (Q05431) L-ascorbate peroxidase, cytosolic (EC 1.11.1.11) (AP)| Length = 249 Score = 58.9 bits (141), Expect = 3e-09 Identities = 27/44 (61%), Positives = 31/44 (70%) Frame = +2 Query: 98 KCYPTVSDEYXXXXXXXXXXXXGLIAEKNCAPLMLRLAWHSAGT 229 K YPTVS++Y GLIAEKNCAP+M+RLAWHSAGT Sbjct: 2 KNYPTVSEDYKKAVEKCRRKLRGLIAEKNCAPIMVRLAWHSAGT 45
>APX1_PEA (P48534) L-ascorbate peroxidase, cytosolic (EC 1.11.1.11) (AP)| Length = 249 Score = 55.8 bits (133), Expect = 3e-08 Identities = 26/44 (59%), Positives = 28/44 (63%) Frame = +2 Query: 98 KCYPTVSDEYXXXXXXXXXXXXGLIAEKNCAPLMLRLAWHSAGT 229 K YPTVS +Y G IAEK CAPL+LRLAWHSAGT Sbjct: 2 KSYPTVSPDYQKAIEKAKRKLRGFIAEKKCAPLILRLAWHSAGT 45
>APX1_ORYSA (P93404) L-ascorbate peroxidase 1, cytosolic (EC 1.11.1.11) (APXa)| Length = 249 Score = 55.1 bits (131), Expect = 5e-08 Identities = 27/44 (61%), Positives = 28/44 (63%) Frame = +2 Query: 98 KCYPTVSDEYXXXXXXXXXXXXGLIAEKNCAPLMLRLAWHSAGT 229 K YP VS EY LIAEK+CAPLMLRLAWHSAGT Sbjct: 2 KNYPVVSAEYQEAVEKARQKLRALIAEKSCAPLMLRLAWHSAGT 45
>APX3_ORYSA (Q6TY83) Putative L-ascorbate peroxidase 3 (EC 1.11.1.11)| Length = 291 Score = 45.8 bits (107), Expect = 3e-05 Identities = 21/41 (51%), Positives = 23/41 (56%) Frame = +2 Query: 107 PTVSDEYXXXXXXXXXXXXGLIAEKNCAPLMLRLAWHSAGT 229 P V EY LIA K+CAP+MLRLAWH AGT Sbjct: 5 PVVDAEYMAEVERARRDLRALIASKSCAPIMLRLAWHDAGT 45
>APX4_ORYSA (Q6ZJJ1) Putative L-ascorbate peroxidase 4 (EC 1.11.1.11)| Length = 291 Score = 43.9 bits (102), Expect = 1e-04 Identities = 20/41 (48%), Positives = 22/41 (53%) Frame = +2 Query: 107 PTVSDEYXXXXXXXXXXXXGLIAEKNCAPLMLRLAWHSAGT 229 P V EY LI+ K CAP+MLRLAWH AGT Sbjct: 4 PVVDAEYLRQVDRARRHLRALISSKGCAPIMLRLAWHDAGT 44
>CATB_STRRE (O87864) Peroxidase/catalase (EC 1.11.1.6) (Catalase-peroxidase)| Length = 740 Score = 32.0 bits (71), Expect = 0.44 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +2 Query: 182 NCAPLMLRLAWHSAGT 229 N PLM+R+AWHSAGT Sbjct: 98 NYGPLMIRMAWHSAGT 113
>CATB_STRCO (Q9RJH9) Peroxidase/catalase (EC 1.11.1.6) (Catalase-peroxidase)| Length = 740 Score = 32.0 bits (71), Expect = 0.44 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +2 Query: 182 NCAPLMLRLAWHSAGT 229 N PLM+R+AWHSAGT Sbjct: 98 NYGPLMIRMAWHSAGT 113
>ABA2_NICPL (Q40412) Zeaxanthin epoxidase, chloroplast precursor (EC| 1.14.13.90) Length = 663 Score = 30.4 bits (67), Expect = 1.3 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -1 Query: 220 RVPREAEHEGRAVLLGDEAPELAPGLGDGGQVLVADRW 107 R P + +GR LLGD + P LG GG + + D + Sbjct: 356 RPPTFSWGKGRVTLLGDSVHAMQPNLGQGGCMAIEDSY 393
>ABA2_CAPAN (Q96375) Zeaxanthin epoxidase, chloroplast precursor (EC| 1.14.13.90) (Xanthophyll epoxidase) (Beta-cyclohexenyl epoxidase) Length = 660 Score = 30.4 bits (67), Expect = 1.3 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -1 Query: 220 RVPREAEHEGRAVLLGDEAPELAPGLGDGGQVLVADRW 107 R P + +GR LLGD + P LG GG + + D + Sbjct: 354 RPPTFSWGKGRVTLLGDSVHAMQPNLGQGGCMAIEDSY 391
>APX6_ORYSA (P0C0L1) Probable L-ascorbate peroxidase 6, chloroplast precursor| (EC 1.11.1.11) Length = 309 Score = 30.4 bits (67), Expect = 1.3 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = +2 Query: 167 LIAEKNCAPLMLRLAWHSAGT 229 L+ +C P+++RL WH AGT Sbjct: 53 LLKSTSCHPILVRLGWHDAGT 73
>ABA2_LYCES (P93236) Zeaxanthin epoxidase, chloroplast precursor (EC| 1.14.13.90) Length = 669 Score = 30.0 bits (66), Expect = 1.7 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = -1 Query: 220 RVPREAEHEGRAVLLGDEAPELAPGLGDGGQVLVADRW 107 R P + GR LLGD + P LG GG + + D + Sbjct: 362 RPPTFSWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDSY 399
>CCPR_CRYNE (Q5KIK5) Cytochrome c peroxidase, mitochondrial precursor (EC| 1.11.1.5) (CCP) Length = 377 Score = 30.0 bits (66), Expect = 1.7 Identities = 11/14 (78%), Positives = 14/14 (100%) Frame = +2 Query: 188 APLMLRLAWHSAGT 229 AP++LRLAWHS+GT Sbjct: 129 APVLLRLAWHSSGT 142
>APX5_ORYSA (P0C0L0) Probable L-ascorbate peroxidase 5, chloroplast precursor| (EC 1.11.1.11) Length = 320 Score = 29.6 bits (65), Expect = 2.2 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +2 Query: 167 LIAEKNCAPLMLRLAWHSAGT 229 L+ C P+++RL WH AGT Sbjct: 64 LLKSNPCHPILVRLGWHDAGT 84
>APX7_ORYSA (Q7XJ02) Probable L-ascorbate peroxidase 7, chloroplast precursor| (EC 1.11.1.11) Length = 359 Score = 28.9 bits (63), Expect = 3.8 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = +2 Query: 167 LIAEKNCAPLMLRLAWHSAGT 229 L+ +C P+++RL WH +GT Sbjct: 102 LLKTTHCHPILVRLGWHDSGT 122
>CCPR_CRYNV (Q6URB0) Cytochrome c peroxidase, mitochondrial precursor (EC| 1.11.1.5) (CCP) Length = 377 Score = 28.9 bits (63), Expect = 3.8 Identities = 10/14 (71%), Positives = 14/14 (100%) Frame = +2 Query: 188 APLMLRLAWHSAGT 229 AP++LRLAWH++GT Sbjct: 129 APVLLRLAWHASGT 142
>CATA_HALSA (O73955) Peroxidase/catalase (EC 1.11.1.6) (Catalase-peroxidase)| (Hydroperoxidase) Length = 720 Score = 28.5 bits (62), Expect = 4.9 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = +2 Query: 191 PLMLRLAWHSAGT 229 PL +R+AWHSAGT Sbjct: 75 PLFIRMAWHSAGT 87
>CCPR_YARLI (Q6C0Z6) Cytochrome c peroxidase, mitochondrial precursor (EC| 1.11.1.5) (CCP) Length = 340 Score = 28.5 bits (62), Expect = 4.9 Identities = 10/13 (76%), Positives = 13/13 (100%) Frame = +2 Query: 191 PLMLRLAWHSAGT 229 P++LRLAWHS+GT Sbjct: 93 PVLLRLAWHSSGT 105
>CATA_HALMA (O59651) Peroxidase/catalase (EC 1.11.1.6) (Catalase-peroxidase)| Length = 730 Score = 28.5 bits (62), Expect = 4.9 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = +2 Query: 191 PLMLRLAWHSAGT 229 PL +R+AWHSAGT Sbjct: 87 PLFIRMAWHSAGT 99
>CATA_BACST (P14412) Peroxidase/catalase (EC 1.11.1.6) (Catalase-peroxidase)| Length = 735 Score = 28.5 bits (62), Expect = 4.9 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = +2 Query: 191 PLMLRLAWHSAGT 229 PL +R+AWHSAGT Sbjct: 93 PLFIRMAWHSAGT 105
>APX8_ORYSA (Q69SV0) Probable L-ascorbate peroxidase 8, chloroplast precursor| (EC 1.11.1.11) Length = 478 Score = 28.5 bits (62), Expect = 4.9 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = +2 Query: 185 CAPLMLRLAWHSAGT 229 C P+M+RL WH +GT Sbjct: 107 CHPIMVRLGWHDSGT 121
>UVRA_VITST (Q08518) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) (Fragment) Length = 569 Score = 28.1 bits (61), Expect = 6.4 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Frame = -1 Query: 202 EHEGRAVLLGDEAPELAPGLGD-GGQVLVAD 113 EH+ A+ D ++ PG G+ GG VL+AD Sbjct: 164 EHDEDAIRAADYVVDMGPGAGELGGAVLIAD 194
>CCPR2_ASPFU (Q4WLG9) Putative heme-binding peroxidase (EC 1.11.1.-)| Length = 322 Score = 28.1 bits (61), Expect = 6.4 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = +2 Query: 182 NCAPLMLRLAWHSAGT 229 + P+ +RLAWHSAGT Sbjct: 27 SAGPVFVRLAWHSAGT 42
>CCPR2_GIBZE (Q4HWQ2) Putative heme-binding peroxidase (EC 1.11.1.-)| Length = 331 Score = 27.7 bits (60), Expect = 8.4 Identities = 9/16 (56%), Positives = 14/16 (87%) Frame = +2 Query: 182 NCAPLMLRLAWHSAGT 229 + P+++RLAWHS+GT Sbjct: 39 SAGPVLVRLAWHSSGT 54
>RNPL1_HUMAN (Q9HAU8) Arginyl aminopeptidase-like 1 (EC 3.4.11.-) (RNPEP-like| protein) Length = 494 Score = 27.7 bits (60), Expect = 8.4 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 Query: 223 GRVPREAEHEGRAVLLGDEAPELAPGLGD 137 G+ + + + +A+LLGDEAP A L D Sbjct: 461 GKAEADTDSDAQALLLGDEAPSSAISLRD 489
>ELK1_HUMAN (P19419) ETS domain-containing protein Elk-1| Length = 428 Score = 27.7 bits (60), Expect = 8.4 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = -1 Query: 223 GRVPREAEHEGRAVLLGDEAPELAPGLGDG 134 GR PR+ E LLG PE PG G G Sbjct: 313 GRKPRDLELPLSPSLLGGPGPERTPGSGSG 342
>CATA_LEGPN (Q9WXB9) Peroxidase/catalase (EC 1.11.1.6) (Catalase-peroxidase)| Length = 749 Score = 27.7 bits (60), Expect = 8.4 Identities = 9/16 (56%), Positives = 13/16 (81%) Frame = +2 Query: 182 NCAPLMLRLAWHSAGT 229 N PL +R++WH+AGT Sbjct: 97 NYGPLFIRMSWHAAGT 112
>CCPR3_YARLI (Q6C7U1) Putative heme-binding peroxidase (EC 1.11.1.-)| Length = 297 Score = 27.7 bits (60), Expect = 8.4 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = +2 Query: 188 APLMLRLAWHSAGT 229 APL++RLAWHS T Sbjct: 65 APLLIRLAWHSCAT 78
>CATA_ARCFU (O28050) Peroxidase/catalase (EC 1.11.1.6) (Catalase-peroxidase)| Length = 741 Score = 27.7 bits (60), Expect = 8.4 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = +2 Query: 191 PLMLRLAWHSAGT 229 PL +RLAWHSAG+ Sbjct: 79 PLFIRLAWHSAGS 91 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,665,271 Number of Sequences: 219361 Number of extensions: 209827 Number of successful extensions: 942 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 922 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 942 length of database: 80,573,946 effective HSP length: 51 effective length of database: 69,386,535 effective search space used: 1665276840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
