>SYE_XANOR (Q5H2R3) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 467

 Score = 32.3 bits (72), Expect = 0.36
 Identities = 18/36 (50%), Positives = 21/36 (58%)
 Frame = -1

Query: 134 CRTGSAPSRCGSAYSYGGPARRRTWQWLPAPRRGGE 27
           CRT  APS  G  Y + G AR   + WL A RRGG+
Sbjct: 3   CRTRFAPSPTG--YLHIGGARTALYCWLEARRRGGQ 36

>ZBED3_HUMAN (Q96IU2) Zinc finger BED domain-containing protein 3|
          Length = 234

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
 Frame = -1

Query: 155 RCRGRGPCRTGSAPSRCGSAYSYGGPARRRTWQWLP-APRRGGEQPGAWRT 6
           +C G GP  T + P R G+ YS         W +   AP R G   G W T
Sbjct: 25  QCPGLGPAPTPTPPGRLGAPYS-------EAWGYFHLAPGRPGHPSGHWAT 68

>SYE_XANCP (Q8P7C5) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 467

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -1

Query: 134 CRTGSAPSRCGSAYSYGGPARRRTWQWLPAPRRGGE 27
           CRT  APS  G  Y + G AR   + WL A  RGG+
Sbjct: 3   CRTRFAPSPTG--YLHIGGARTALYCWLEARHRGGQ 36

>SYE_XANAC (Q8PIP8) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 467

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -1

Query: 134 CRTGSAPSRCGSAYSYGGPARRRTWQWLPAPRRGGE 27
           CRT  APS  G  Y + G AR   + WL A  RGG+
Sbjct: 3   CRTRFAPSPTG--YLHIGGARTALYCWLEARHRGGQ 36

>ARPA_PSEPU (Q9KJC3) Antibiotic efflux pump periplasmic linker protein arpA|
           precursor
          Length = 371

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +1

Query: 28  SPPRRGAGSHCHVRRRAGPP 87
           SP RRG G  CH R+ AG P
Sbjct: 352 SPRRRGEGQRCHQRQEAGRP 371

>YHL1_EBV (P03181) Hypothetical protein BHLF1|
          Length = 660

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
 Frame = -1

Query: 161 AARC-RGRGPCRTGSAPSRC-----GSAYSYGGPARRRTWQWLPAPRRGGEQPGAWRTP 3
           A RC  G  P R+G+A  R      G   S   P   RTW+     +RG   PGA + P
Sbjct: 495 AQRCPAGPPPTRSGAAAQRTHRRPPGCPRSARNPGCPRTWRRRSGAQRGHPPPGAGQRP 553



 Score = 29.6 bits (65), Expect = 2.3
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
 Frame = -1

Query: 161 AARC-RGRGPCRTGSAPSRC-----GSAYSYGGPARRRTWQWLPAPRRGGEQPGAWRTP 3
           A RC  G  P R+G+A  R      G   S   P   RTW+     +RG   PGA + P
Sbjct: 370 AQRCPAGPPPTRSGAAAQRTHRRPPGCPRSARNPGCPRTWRRRSGAQRGHPPPGAGQRP 428



 Score = 29.6 bits (65), Expect = 2.3
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
 Frame = -1

Query: 161 AARC-RGRGPCRTGSAPSRC-----GSAYSYGGPARRRTWQWLPAPRRGGEQPGAWRTP 3
           A RC  G  P R+G+A  R      G   S   P   RTW+     +RG   PGA + P
Sbjct: 245 AQRCPAGPPPTRSGAAAQRTHRRPPGCPRSARNPGCPRTWRRRSGAQRGHPPPGAGQRP 303

>YNL5_CAEEL (Q21955) Hypothetical protein R12B2.5|
          Length = 780

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -1

Query: 164 PAARCRGRGPCRTGSAPSRCGSAYSYGGPARRRTWQWLPAPRRGGEQPG 18
           P ++  G GP    + P   GS+   GGPA  +    + AP  GG   G
Sbjct: 180 PGSQAPGGGPTPAPNVPFPNGSSQMNGGPAMGQPPPQMGAPNMGGPPNG 228

>FP2_MYTGA (Q25464) Adhesive plaque matrix protein 2 precursor (Foot protein|
           2) (MGFP2) (MGFP-2)
          Length = 473

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 170 CWPAARCRGRGPCRTGSAPSRCGSAYSYGG 81
           C  +  C+ RG C       RC  AY YGG
Sbjct: 387 CVVSKPCKNRGKCIWNGKAYRCKCAYGYGG 416

>DSCR6_HUMAN (P57055) Down syndrome critical region protein 6|
          Length = 190

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 17/51 (33%), Positives = 18/51 (35%)
 Frame = -1

Query: 161 AARCRGRGPCRTGSAPSRCGSAYSYGGPARRRTWQWLPAPRRGGEQPGAWR 9
           A + RGRG    G AP                   W P P RG E P  WR
Sbjct: 9   ARKARGRGCHCPGDAP-------------------WRPPPPRGPESPAPWR 40


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,951,668
Number of Sequences: 219361
Number of extensions: 389381
Number of successful extensions: 1325
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of database: 80,573,946
effective HSP length: 32
effective length of database: 73,554,394
effective search space used: 1765305456
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)