ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast11h07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479757.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3205 Score = 46.1 bits (23), Expect = 0.058 Identities = 23/23 (100%) Strand = Plus / Minus Query: 176 gccgcctccgcctccgcccccgg 198 ||||||||||||||||||||||| Sbjct: 105 gccgcctccgcctccgcccccgg 83
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.058 Identities = 23/23 (100%) Strand = Plus / Plus Query: 176 gccgcctccgcctccgcccccgg 198 ||||||||||||||||||||||| Sbjct: 707414 gccgcctccgcctccgcccccgg 707436 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 24496970 ccgcctccgcctccgcccccg 24496950
>dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0427G12 Length = 185545 Score = 46.1 bits (23), Expect = 0.058 Identities = 23/23 (100%) Strand = Plus / Plus Query: 176 gccgcctccgcctccgcccccgg 198 ||||||||||||||||||||||| Sbjct: 6634 gccgcctccgcctccgcccccgg 6656
>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498H04 Length = 151046 Score = 46.1 bits (23), Expect = 0.058 Identities = 23/23 (100%) Strand = Plus / Plus Query: 176 gccgcctccgcctccgcccccgg 198 ||||||||||||||||||||||| Sbjct: 134792 gccgcctccgcctccgcccccgg 134814
>dbj|AK102710.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033104J20, full insert sequence Length = 3209 Score = 46.1 bits (23), Expect = 0.058 Identities = 23/23 (100%) Strand = Plus / Minus Query: 176 gccgcctccgcctccgcccccgg 198 ||||||||||||||||||||||| Sbjct: 105 gccgcctccgcctccgcccccgg 83
>ref|XM_473025.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1410 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 176 gccgcctccgcctccgcccccg 197 |||||||||||||||||||||| Sbjct: 247 gccgcctccgcctccgcccccg 268
>ref|XM_848418.1| PREDICTED: Canis familiaris similar to Transmembrane 7 superfamily member 1 (LOC612969), mRNA Length = 1671 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Minus Query: 177 ccgcctccgcctccgcccccgg 198 |||||||||||||||||||||| Sbjct: 470 ccgcctccgcctccgcccccgg 449
>gb|AC091776.19| Chlamydomonas reinhardtii clone cr-4i21, complete sequence Length = 48498 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 176 gccgcctccgcctccgcccccg 197 |||||||||||||||||||||| Sbjct: 11707 gccgcctccgcctccgcccccg 11728
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 176 gccgcctccgcctccgcccccg 197 |||||||||||||||||||||| Sbjct: 159221 gccgcctccgcctccgcccccg 159242
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Minus Query: 176 gccgcctccgcctccgcccccg 197 |||||||||||||||||||||| Sbjct: 24748338 gccgcctccgcctccgcccccg 24748317
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Minus Query: 176 gccgcctccgcctccgcccccg 197 |||||||||||||||||||||| Sbjct: 4386861 gccgcctccgcctccgcccccg 4386840 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 gccgcctccgcctccgccccc 196 ||||||||||||||||||||| Sbjct: 23954928 gccgcctccgcctccgccccc 23954908 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 20979329 ccgcctccgcctccgcccccg 20979309 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 12168783 ccgcctccgcctccgcccccg 12168763 Score = 40.1 bits (20), Expect = 3.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 40 gcagccaccacctgctgctcctcccccttccc 71 |||||||||||||||| ||||| | ||||||| Sbjct: 27356803 gcagccaccacctgcttctccttctccttccc 27356834 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 gccgcctccgcctccgcccccgga 199 |||||||||||||||||| ||||| Sbjct: 3869106 gccgcctccgcctccgccgccgga 3869129 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 gccgcctccgcctccgcccccgga 199 |||||||||||||||||| ||||| Sbjct: 3831050 gccgcctccgcctccgccgccgga 3831073 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 cggcgagccgcctccgcctccgcc 193 ||||| |||||||||||||||||| Sbjct: 3130804 cggcgcgccgcctccgcctccgcc 3130827
>gb|AE004651.1| Pseudomonas aeruginosa PAO1, section 212 of 529 of the complete genome Length = 10728 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 40 gcagccaccacctgctgctcct 61 |||||||||||||||||||||| Sbjct: 4985 gcagccaccacctgctgctcct 5006
>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0470C02 Length = 158849 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Minus Query: 176 gccgcctccgcctccgcccccg 197 |||||||||||||||||||||| Sbjct: 34542 gccgcctccgcctccgcccccg 34521
>dbj|AK099819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100I11, full insert sequence Length = 3733 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 176 gccgcctccgcctccgcccccg 197 |||||||||||||||||||||| Sbjct: 341 gccgcctccgcctccgcccccg 362
>gb|AF002222.1|AF002222 Pseudomonas aeruginosa pyoverdine chromophore biosynthesis gene cluster including PvcA (pvcA), PvcB (pvcB), PvcC (pvcC), and PvcD (pvcD) genes, complete cds, and transcriptional activator PtxR (ptxR) gene, complete cds Length = 6397 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 40 gcagccaccacctgctgctcct 61 |||||||||||||||||||||| Sbjct: 2096 gcagccaccacctgctgctcct 2117
>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08, complete sequence Length = 170765 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Minus Query: 176 gccgcctccgcctccgcccccg 197 |||||||||||||||||||||| Sbjct: 10054 gccgcctccgcctccgcccccg 10033
>gb|AC168269.3| Mus musculus BAC clone RP23-193M17 from chromosome 17, complete sequence Length = 223337 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 115093 ccgcctccgcctccgcccccg 115113
>gb|AC166102.2| Mus musculus BAC clone RP23-397O23 from chromosome 17, complete sequence Length = 204842 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 144101 ccgcctccgcctccgcccccg 144121
>ref|XM_483150.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1448 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 263 ccgcctccgcctccgcccccg 243
>ref|XM_469951.1| Oryza sativa (japonica cultivar-group), mRNA Length = 566 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 gccgcctccgcctccgccccc 196 ||||||||||||||||||||| Sbjct: 140 gccgcctccgcctccgccccc 120
>ref|NM_001031098.1| Gallus gallus proopiomelanocortin (adrenocorticotropin/ beta-lipotropin/ alpha-melanocyte stimulating hormone/ beta-melanocyte stimulating hormone/ beta-endorphin) (POMC), mRNA Length = 756 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 ctcctcgccttcctcttcctc 130 ||||||||||||||||||||| Sbjct: 591 ctcctcgccttcctcttcctc 571
>ref|NM_197895.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0035H01.3), mRNA Length = 1235 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 cggagaggtggagctgaggct 275 ||||||||||||||||||||| Sbjct: 27 cggagaggtggagctgaggct 47
>gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B12, complete sequence Length = 187523 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 ctcctcgccttcctcttcctc 130 ||||||||||||||||||||| Sbjct: 69324 ctcctcgccttcctcttcctc 69304
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 176 gccgcctccgcctccgccccc 196 ||||||||||||||||||||| Sbjct: 89770 gccgcctccgcctccgccccc 89790
>gb|AF235103.5| Homo sapiens chromosome 8 multiple clones map q24.3, complete sequence Length = 345524 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 ccaccacctgctgctcctccc 64 ||||||||||||||||||||| Sbjct: 93192 ccaccacctgctgctcctccc 93212
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 gccgcctccgcctccgccccc 196 ||||||||||||||||||||| Sbjct: 32654137 gccgcctccgcctccgccccc 32654117 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgccccc 196 |||||||||||||||||||| Sbjct: 36091122 ccgcctccgcctccgccccc 36091141 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 cgcctccttgccggcgagccgcct 182 ||||||||||||| |||||||||| Sbjct: 29249129 cgcctccttgccgacgagccgcct 29249106 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 agccgcctccgcctccgcccccgg 198 ||||||||||||||||||| |||| Sbjct: 29104744 agccgcctccgcctccgccgccgg 29104767
>gb|AY230325.1| Triticum aestivum clone 3W2c-A9 FCA protein (Fca) mRNA, partial cds Length = 2183 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 151 ccgcctccgcctccgcccccg 131
>gb|AC132474.3| Mus musculus BAC clone RP23-114G13 from chromosome 9, complete sequence Length = 220976 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 121907 ccgcctccgcctccgcccccg 121927
>gb|AC095025.2| Sus scrofa clone RP44-93L12, complete sequence Length = 176757 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 tcgccttcctcttcctcggcc 134 ||||||||||||||||||||| Sbjct: 123499 tcgccttcctcttcctcggcc 123519
>gb|AC091685.4| Homo sapiens BAC clone RP11-165H4 from 7, complete sequence Length = 68299 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 65043 ccgcctccgcctccgcccccg 65063
>gb|AC164702.2| Mus musculus BAC clone RP23-402H19 from chromosome 10, complete sequence Length = 208221 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 106490 ccgcctccgcctccgcccccg 106470
>emb|AL160278.24| Human DNA sequence from clone RP11-574G7 on chromosome 9 Contains the 5' end of the GNAQ gene for guanine nucleotide binding protein (G protein) q polypeptide and a CpG island, complete sequence Length = 215399 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 167886 ccgcctccgcctccgcccccg 167906
>emb|AL109754.13|HSDJ839B4 Human DNA sequence from clone RP5-839B4 on chromosome 20 Contains the 3' end of a novel gene, part of a novel gene, the ANKRD5 gene for ankyrin repeat domain 5 and a CpG island, complete sequence Length = 165010 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 57309 ccgcctccgcctccgcccccg 57289
>gb|AC027037.6| Oryza sativa chromosome 10 BAC OSJNBa0035H01 genomic sequence, complete sequence Length = 64582 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 cggagaggtggagctgaggct 275 ||||||||||||||||||||| Sbjct: 28335 cggagaggtggagctgaggct 28355
>gb|AC133618.3| Rattus norvegicus 18 BAC CH230-71N8 (Children's Hospital Oakland Research Institute) complete sequence Length = 234684 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 130552 ccgcctccgcctccgcccccg 130572
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12 Length = 348171 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 tcctcggccagcttggcgccg 146 ||||||||||||||||||||| Sbjct: 93406 tcctcggccagcttggcgccg 93426
>emb|AJ002893.1|OSAJ2893 Oryza sativa mRNA for glycine-rich RNA-binding protein (OsGRP1) Length = 780 Score = 42.1 bits (21), Expect = 0.91 Identities = 24/25 (96%) Strand = Plus / Minus Query: 175 agccgcctccgcctccgcccccgga 199 ||||||||||||||||||| ||||| Sbjct: 379 agccgcctccgcctccgcctccgga 355
>emb|AJ420286.1|LIN420286 Leishmania infantum cpb gene for cysteine proteinase Length = 2767 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 tcgccttcctcttcctcggcc 134 ||||||||||||||||||||| Sbjct: 1840 tcgccttcctcttcctcggcc 1820
>gb|DQ397572.1| Cenarchaeum symbiosum clone C09A12, complete sequence Length = 43887 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 gccgcctccgcctccgccccc 196 ||||||||||||||||||||| Sbjct: 28030 gccgcctccgcctccgccccc 28010
>gb|AC098567.4| Genomic sequence for Mus musculus, clone RP23-198E6, from chromosome 17, complete sequence Length = 185277 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 113185 ccgcctccgcctccgcccccg 113165
>gb|AC153372.5| Mus musculus 6 BAC RP23-358G19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 230623 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 77602 ccgcctccgcctccgcccccg 77622
>gb|AF004592.2|AF004592 Leishmania donovani chagasi amastigote-specific cysteine protease (ldccys1) mRNA, complete cds Length = 2498 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 tcgccttcctcttcctcggcc 134 ||||||||||||||||||||| Sbjct: 1832 tcgccttcctcttcctcggcc 1812
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 0.91 Identities = 24/25 (96%) Strand = Plus / Minus Query: 175 agccgcctccgcctccgcccccgga 199 ||||||||||||||||||| ||||| Sbjct: 27096878 agccgcctccgcctccgcctccgga 27096854
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 cggagaggtggagctgaggct 275 ||||||||||||||||||||| Sbjct: 22512617 cggagaggtggagctgaggct 22512637 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgccccc 196 |||||||||||||||||||| Sbjct: 21797104 ccgcctccgcctccgccccc 21797123 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgccccc 196 |||||||||||||||||||| Sbjct: 15942828 ccgcctccgcctccgccccc 15942847
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 15201424 ccgcctccgcctccgcccccg 15201444
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 ctcctcgccttcctcttcctc 130 ||||||||||||||||||||| Sbjct: 4974739 ctcctcgccttcctcttcctc 4974719 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 cctcgccttcctcttcctcg 131 |||||||||||||||||||| Sbjct: 23049602 cctcgccttcctcttcctcg 23049583
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 gccgcctccgcctccgccccc 196 ||||||||||||||||||||| Sbjct: 32744647 gccgcctccgcctccgccccc 32744627 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgccccc 196 |||||||||||||||||||| Sbjct: 36181196 ccgcctccgcctccgccccc 36181215 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 cgcctccttgccggcgagccgcct 182 ||||||||||||| |||||||||| Sbjct: 29340557 cgcctccttgccgacgagccgcct 29340534 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 agccgcctccgcctccgcccccgg 198 ||||||||||||||||||| |||| Sbjct: 29196166 agccgcctccgcctccgccgccgg 29196189
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 agccgcctccgcctccgcccc 195 ||||||||||||||||||||| Sbjct: 12851445 agccgcctccgcctccgcccc 12851425
>gb|AF204951.2|AF204951 Ectocarpus siliculosus virus, complete genome Length = 335593 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 173797 ccgcctccgcctccgcccccg 173777
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 5922339 ccgcctccgcctccgcccccg 5922359
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 ctcctcgccttcctcttcctc 130 ||||||||||||||||||||| Sbjct: 780051 ctcctcgccttcctcttcctc 780031
>dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0592B08 Length = 131096 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 5805 ccgcctccgcctccgcccccg 5785
>dbj|AP003507.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0468A12 Length = 143018 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 111572 ccgcctccgcctccgcccccg 111552
>dbj|AP004739.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0090E14 Length = 161119 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 106253 ccgcctccgcctccgcccccg 106233
>dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0490F09 Length = 149542 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 gccgcctccgcctccgccccc 196 ||||||||||||||||||||| Sbjct: 84539 gccgcctccgcctccgccccc 84519
>dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0026F07 Length = 137354 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 5230 ccgcctccgcctccgcccccg 5210
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1740_D06 Length = 187410 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 95400 ccgcctccgcctccgcccccg 95420
>dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A18 Length = 176755 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 agccgcctccgcctccgcccc 195 ||||||||||||||||||||| Sbjct: 70927 agccgcctccgcctccgcccc 70907
>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1142B04 Length = 161964 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 112686 ccgcctccgcctccgcccccg 112666
>dbj|AK110964.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-B04, full insert sequence Length = 1448 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 263 ccgcctccgcctccgcccccg 243
>dbj|AK108146.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-F04, full insert sequence Length = 801 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 agccgcctccgcctccgcccc 195 ||||||||||||||||||||| Sbjct: 340 agccgcctccgcctccgcccc 320
>dbj|AK101900.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071B22, full insert sequence Length = 1707 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 252 ccgcctccgcctccgcccccg 232
>dbj|AK100829.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123B19, full insert sequence Length = 1545 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 gccgcctccgcctccgccccc 196 ||||||||||||||||||||| Sbjct: 154 gccgcctccgcctccgccccc 134
>dbj|AK100237.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052F21, full insert sequence Length = 1551 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 cggagaggtggagctgaggct 275 ||||||||||||||||||||| Sbjct: 314 cggagaggtggagctgaggct 334
>dbj|AK073614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033054G13, full insert sequence Length = 1200 Score = 42.1 bits (21), Expect = 0.91 Identities = 24/25 (96%) Strand = Plus / Minus Query: 175 agccgcctccgcctccgcccccgga 199 ||||||||||||||||||| ||||| Sbjct: 104 agccgcctccgcctccgcctccgga 80
>dbj|AK068848.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013164G10, full insert sequence Length = 1650 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 gccgcctccgcctccgccccc 196 ||||||||||||||||||||| Sbjct: 105 gccgcctccgcctccgccccc 85
>dbj|AK065671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041C14, full insert sequence Length = 1208 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 57 ccgcctccgcctccgcccccg 77
>dbj|AK061718.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H11, full insert sequence Length = 1457 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 cggagaggtggagctgaggct 275 ||||||||||||||||||||| Sbjct: 331 cggagaggtggagctgaggct 351
>dbj|AK060873.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H12, full insert sequence Length = 1321 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 98 ccgcctccgcctccgcccccg 118
>dbj|AK058559.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-D08, full insert sequence Length = 1706 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 251 ccgcctccgcctccgcccccg 231
>gb|AY105338.1| Zea mays PCO102700 mRNA sequence Length = 1951 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgcccccg 197 ||||||||||||||||||||| Sbjct: 121 ccgcctccgcctccgcccccg 141
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 cggagaggtggagctgaggct 275 ||||||||||||||||||||| Sbjct: 22525085 cggagaggtggagctgaggct 22525105 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgccccc 196 |||||||||||||||||||| Sbjct: 21808767 ccgcctccgcctccgccccc 21808786 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgccccc 196 |||||||||||||||||||| Sbjct: 15951069 ccgcctccgcctccgccccc 15951088
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 0.91 Identities = 24/25 (96%) Strand = Plus / Minus Query: 175 agccgcctccgcctccgcccccgga 199 ||||||||||||||||||| ||||| Sbjct: 27022474 agccgcctccgcctccgcctccgga 27022450
>emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131300 Score = 42.1 bits (21), Expect = 0.91 Identities = 24/25 (96%) Strand = Plus / Plus Query: 175 agccgcctccgcctccgcccccgga 199 ||||||||||||||||||| ||||| Sbjct: 59359 agccgcctccgcctccgcctccgga 59383
>emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145816 Score = 42.1 bits (21), Expect = 0.91 Identities = 24/25 (96%) Strand = Plus / Minus Query: 175 agccgcctccgcctccgcccccgga 199 ||||||||||||||||||| ||||| Sbjct: 35773 agccgcctccgcctccgcctccgga 35749
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 ctcctcgccttcctcttcctc 130 ||||||||||||||||||||| Sbjct: 451130 ctcctcgccttcctcttcctc 451110
>dbj|AB019555.1| Gallus gallus gene for pro-opiomelanocortin, complete cds Length = 5292 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 ctcctcgccttcctcttcctc 130 ||||||||||||||||||||| Sbjct: 3645 ctcctcgccttcctcttcctc 3625
>gb|L12465.1|CLOFOLSYN Clostridium cylindrosporum formyltetrahydrofolate synthetase gene, complete cds Length = 1894 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 ccaccacctgctgctcctccc 64 ||||||||||||||||||||| Sbjct: 489 ccaccacctgctgctcctccc 469
>dbj|AB061821.1| Homo sapiens RPL8 gene for ribosomal protein L8, complete cds and sequence Length = 4505 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 ccaccacctgctgctcctccc 64 ||||||||||||||||||||| Sbjct: 2981 ccaccacctgctgctcctccc 2961
>ref|XM_550342.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1834 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 cggcgagccgcctccgcctccgcc 193 ||||| |||||||||||||||||| Sbjct: 592 cggcgcgccgcctccgcctccgcc 615
>ref|NM_197781.1| Oryza sativa (japonica cultivar-group) putative phosphatidylinositol-4-phosphate 5-kinase (OSJNBa0027P10.22), mRNA Length = 1404 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgccccc 196 |||||||||||||||||||| Sbjct: 578 ccgcctccgcctccgccccc 597
>ref|NM_196776.1| Oryza sativa (japonica cultivar-group) putative glycine-rich protein (OSJNBa0068N06.28), mRNA Length = 552 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 ccgcctccgcctccgccccc 196 |||||||||||||||||||| Sbjct: 103 ccgcctccgcctccgccccc 84
>ref|NM_191136.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1392 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 ccaccacctgctgctcctcc 63 |||||||||||||||||||| Sbjct: 70 ccaccacctgctgctcctcc 51
>ref|XM_469583.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1721 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 agccgcctccgcctccgcccccgg 198 ||||||||||||||||||| |||| Sbjct: 632 agccgcctccgcctccgccgccgg 655
>ref|XM_470521.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3145 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgccccc 196 |||||||||||||||||||| Sbjct: 102 ccgcctccgcctccgccccc 121
>ref|XM_479018.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1726 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gccggcgagccgcctccgcc 187 |||||||||||||||||||| Sbjct: 147 gccggcgagccgcctccgcc 166
>ref|NM_198414.1| Mus musculus progestin and adipoQ receptor family member IX (Paqr9), mRNA Length = 2305 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgccccc 196 |||||||||||||||||||| Sbjct: 216 ccgcctccgcctccgccccc 235
>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map near C10769, complete sequence Length = 194856 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 agccgcctccgcctccgcccccgg 198 ||||||||||||||||||| |||| Sbjct: 34547 agccgcctccgcctccgccgccgg 34524
>gb|AC135423.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015C02, complete sequence Length = 147407 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 cctcgccttcctcttcctcg 131 |||||||||||||||||||| Sbjct: 112082 cctcgccttcctcttcctcg 112063
>gb|AC121364.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052E20, complete sequence Length = 162434 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 cctcgccttcctcttcctcg 131 |||||||||||||||||||| Sbjct: 153615 cctcgccttcctcttcctcg 153596
>gb|DQ100375.1| Struthio camelus preproopiomelanocortin mRNA, complete cds Length = 1072 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 ctcctcgccttcctcttcctcggc 133 ||||||||||||||| |||||||| Sbjct: 621 ctcctcgccttcctcctcctcggc 598
>gb|AC135228.5| Oryza sativa chromosome 3 BAC OSJNBb0122C16 genomic sequence, complete sequence Length = 129440 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 cgcctccttgccggcgagccgcct 182 ||||||||||||| |||||||||| Sbjct: 80996 cgcctccttgccgacgagccgcct 80973
>ref|XM_960364.1| Neurospora crassa OR74A hypothetical protein (NCU02684.1) partial mRNA Length = 1923 Score = 40.1 bits (20), Expect = 3.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 162 ctccttgccggcg-agccgcctccgcctccgccccc 196 ||||||||||||| ||| |||||||| ||||||||| Sbjct: 1570 ctccttgccggcgaagctgcctccgcgtccgccccc 1605
>gb|AY425710.1| Triticum aestivum sucrose-phosphate synthase (SPS10) mRNA, partial cds Length = 641 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 gagccgcctccgcctccgcc 193 |||||||||||||||||||| Sbjct: 159 gagccgcctccgcctccgcc 140
>ref|XM_331882.1| Neurospora crassa OR74A hypothetical protein (NCU02684.1) partial mRNA Length = 1923 Score = 40.1 bits (20), Expect = 3.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 162 ctccttgccggcg-agccgcctccgcctccgccccc 196 ||||||||||||| ||| |||||||| ||||||||| Sbjct: 1570 ctccttgccggcgaagctgcctccgcgtccgccccc 1605
>gb|DQ191803.1| Leifsonia xyli subsp. cynodontis insertion sequence ISLXC1, complete sequence Length = 2642 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 cctccgcctccgcccccgga 199 |||||||||||||||||||| Sbjct: 559 cctccgcctccgcccccgga 540
>gb|AC044864.6| Mus musculus chromosome 3, clone RP23-168E14, complete sequence Length = 224119 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tgcagccaccacctgctgct 58 |||||||||||||||||||| Sbjct: 209543 tgcagccaccacctgctgct 209562
>gb|AC079957.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-144I17, complete sequence Length = 196474 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 cgcctccgcctccgcccccg 197 |||||||||||||||||||| Sbjct: 147024 cgcctccgcctccgcccccg 147043
>gb|AC102388.7| Mus musculus chromosome 3, clone RP24-298F19, complete sequence Length = 166620 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 tgcagccaccacctgctgct 58 |||||||||||||||||||| Sbjct: 138524 tgcagccaccacctgctgct 138505
>gb|AC124676.7| Mus musculus chromosome 6, clone RP24-93M1, complete sequence Length = 212789 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cgcctccgcctccgcccccg 197 |||||||||||||||||||| Sbjct: 142752 cgcctccgcctccgcccccg 142733
>gb|AC163038.5| Mus musculus BAC clone RP23-180A14 from chromosome 13, complete sequence Length = 213865 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 tccgcctccgcccccggacctccc 205 ||||||||||||||||| |||||| Sbjct: 193368 tccgcctccgcccccgggcctccc 193345
>ref|XM_974720.1| PREDICTED: Mus musculus progestin and adipoQ receptor family member IX (Paqr9), mRNA Length = 2171 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgccccc 196 |||||||||||||||||||| Sbjct: 82 ccgcctccgcctccgccccc 101
>gb|AC145380.3| Oryza sativa chromosome 3 BAC OSJNBa0013A09 genomic sequence, complete sequence Length = 139788 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 cgcctccttgccggcgagccgcct 182 ||||||||||||| |||||||||| Sbjct: 106871 cgcctccttgccgacgagccgcct 106894
>gb|AC119853.9| Mus musculus chromosome 16, clone RP23-231E23, complete sequence Length = 236274 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 ccgcctccgcctccgccccc 196 |||||||||||||||||||| Sbjct: 201129 ccgcctccgcctccgccccc 201110
>ref|XM_822107.1| Trypanosoma brucei TREU927 hypothetical protein (Tb09.211.0580) partial mRNA Length = 6975 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ccagcttggcgccgctctct 152 |||||||||||||||||||| Sbjct: 3507 ccagcttggcgccgctctct 3526
>gb|AY424298.1| Mus musculus progestin and adipoQ receptor family member IX (Paqr9) mRNA, complete cds Length = 2305 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgccccc 196 |||||||||||||||||||| Sbjct: 216 ccgcctccgcctccgccccc 235
>gb|AC137997.2| Oryza sativa chromosome 3 BAC OJ1499_D04 genomic sequence, complete sequence Length = 91084 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 agccgcctccgcctccgcccccgg 198 ||||||||||||||||||| |||| Sbjct: 66632 agccgcctccgcctccgccgccgg 66609
>emb|AL121933.15|HSA549D23 Human DNA sequence from clone RP11-549D23 on chromosome 6, complete sequence Length = 185467 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 ccgcctccgcctccgccccc 196 |||||||||||||||||||| Sbjct: 138798 ccgcctccgcctccgccccc 138779
>ref|XM_966583.1| PREDICTED: Tribolium castaneum similar to CG10601-PA, isoform A (LOC660345), mRNA Length = 1377 Score = 40.1 bits (20), Expect = 3.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 170 cggcgagccgcctccgcct-ccgcccccggacctcc 204 ||||||||||||||||| | |||||||||| ||||| Sbjct: 1061 cggcgagccgcctccgcttgccgcccccgggcctcc 1096
>emb|X06659.1|OCAPOAIG Rabbit gene for apolipoprotein A-I Length = 1994 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 ctcggccagcttggcgccgc 147 |||||||||||||||||||| Sbjct: 1760 ctcggccagcttggcgccgc 1741
>emb|X06658.1|OCAPOAIR Rabbit mRNA for apolipoprotein A-I Length = 925 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 ctcggccagcttggcgccgc 147 |||||||||||||||||||| Sbjct: 691 ctcggccagcttggcgccgc 672
>gb|AC159895.2| Mus musculus BAC clone RP23-260J19 from chromosome 9, complete sequence Length = 191882 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 ccgcctccgcctccgccccc 196 |||||||||||||||||||| Sbjct: 32163 ccgcctccgcctccgccccc 32144
>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete sequence Length = 164179 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgccccc 196 |||||||||||||||||||| Sbjct: 152633 ccgcctccgcctccgccccc 152652
>emb|BX842634.1| Neurospora crassa DNA linkage group I BAC contig B16B8 Length = 138191 Score = 40.1 bits (20), Expect = 3.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 162 ctccttgccggcg-agccgcctccgcctccgccccc 196 ||||||||||||| ||| |||||||| ||||||||| Sbjct: 124773 ctccttgccggcgaagctgcctccgcgtccgccccc 124738
>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16 Length = 347786 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 tcctcggccagcttggcgcc 145 |||||||||||||||||||| Sbjct: 145822 tcctcggccagcttggcgcc 145803
>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14 Length = 349146 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 tcctcggccagcttggcgcc 145 |||||||||||||||||||| Sbjct: 146484 tcctcggccagcttggcgcc 146465
>ref|NM_001000537.1| Rattus norvegicus olfactory receptor 1667 (predicted) (Olr1667_predicted), mRNA Length = 945 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 tcgccttcctcttcctcggc 133 |||||||||||||||||||| Sbjct: 305 tcgccttcctcttcctcggc 324
>gb|AC151608.2| Emiliania huxleyi clone JGIACCU-13E1, complete sequence Length = 30907 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgccccc 196 |||||||||||||||||||| Sbjct: 11698 ccgcctccgcctccgccccc 11717
>gb|DQ397612.1| Cenarchaeum symbiosum clone C15H04, complete sequence Length = 44579 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 166 ttgccggcgagccgcctccgcctccgcc 193 ||||||| | |||||||||||||||||| Sbjct: 1703 ttgccggtgcgccgcctccgcctccgcc 1676
>gb|DQ397553.1| Cenarchaeum symbiosum clone C07E08, complete sequence Length = 40832 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 166 ttgccggcgagccgcctccgcctccgcc 193 ||||||| | |||||||||||||||||| Sbjct: 39989 ttgccggtgcgccgcctccgcctccgcc 40016
>gb|AC087543.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0068N06, complete sequence Length = 174019 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgccccc 196 |||||||||||||||||||| Sbjct: 114352 ccgcctccgcctccgccccc 114371
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 aataatggcggcggccatgt 34 |||||||||||||||||||| Sbjct: 4619309 aataatggcggcggccatgt 4619290
>gb|AC104447.2| Homo sapiens chromosome 3 clone RP11-447D11, complete sequence Length = 202544 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 agccaccacctgctgctcct 61 |||||||||||||||||||| Sbjct: 142183 agccaccacctgctgctcct 142164
>dbj|AK133021.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930555D05 product:hypothetical Hly-III related proteins containing protein, full insert sequence Length = 1170 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgccccc 196 |||||||||||||||||||| Sbjct: 83 ccgcctccgcctccgccccc 102
>gb|AC005902.7| Homo sapiens 3p21.3-4 PAC RPCI4-544D10 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 89218 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 agccaccacctgctgctcct 61 |||||||||||||||||||| Sbjct: 16012 agccaccacctgctgctcct 15993
>gb|BC100408.1| Mus musculus Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans), mRNA (cDNA clone MGC:118167 IMAGE:30734268), complete cds Length = 3121 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tgcagccaccacctgctgct 58 |||||||||||||||||||| Sbjct: 2788 tgcagccaccacctgctgct 2807
>gb|AC008937.7| Homo sapiens chromosome 5 clone CTD-2310F14, complete sequence Length = 171480 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cgcctccgcctccgcccccg 197 |||||||||||||||||||| Sbjct: 118811 cgcctccgcctccgcccccg 118792
>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete sequence Length = 141307 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgccccc 196 |||||||||||||||||||| Sbjct: 111787 ccgcctccgcctccgccccc 111806
>gb|AC154437.2| Mus musculus BAC clone RP24-194D17 from chromosome 13, complete sequence Length = 180558 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 tccgcctccgcccccggacctccc 205 ||||||||||||||||| |||||| Sbjct: 15749 tccgcctccgcccccgggcctccc 15726
>ref|NM_077087.2| Caenorhabditis elegans UNCoordinated family member (unc-27) (unc-27) mRNA, complete cds Length = 1125 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 ctcctcgccttcctcttcctcggc 133 |||||| ||||||||||||||||| Sbjct: 906 ctcctctccttcctcttcctcggc 883
>gb|BC036671.2| Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5, mRNA (cDNA clone IMAGE:4811640) Length = 3566 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tcctcgccttcctcttcctc 130 |||||||||||||||||||| Sbjct: 2959 tcctcgccttcctcttcctc 2940
>gb|AY423389.1| Canis familiaris BAC 231G24 MHC class I locus, partial sequence Length = 150102 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgccccc 196 |||||||||||||||||||| Sbjct: 5086 ccgcctccgcctccgccccc 5105
>ref|XM_394766.2| PREDICTED: Apis mellifera similar to CG33175-PG, isoform G (LOC411292), partial mRNA Length = 3759 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 cgcctccgcctccgcccccg 197 |||||||||||||||||||| Sbjct: 941 cgcctccgcctccgcccccg 960
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gccggcgagccgcctccgcc 187 |||||||||||||||||||| Sbjct: 24335720 gccggcgagccgcctccgcc 24335739
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ccgtgctcctcgccttcctc 124 |||||||||||||||||||| Sbjct: 32597046 ccgtgctcctcgccttcctc 32597027 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 ccaccacctgctgctcctcc 63 |||||||||||||||||||| Sbjct: 30862015 ccaccacctgctgctcctcc 30861996
>dbj|AB049148.2| Marsupenaeus japonicus DD4(ccn) mRNA for crustocalcin, complete cds Length = 3217 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tcctcgccttcctcttcctc 130 |||||||||||||||||||| Sbjct: 385 tcctcgccttcctcttcctc 366
>gb|AF090447.2| Zea mays 22 kDa alpha zein gene cluster, complete sequence Length = 346296 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 cgtgctcctcgccttcctct 125 |||||||||||||||||||| Sbjct: 37760 cgtgctcctcgccttcctct 37779
>dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0638D12 Length = 161277 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 ccaccacctgctgctcctcc 63 |||||||||||||||||||| Sbjct: 62382 ccaccacctgctgctcctcc 62363
>dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0695H10 Length = 136883 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ccgtgctcctcgccttcctc 124 |||||||||||||||||||| Sbjct: 59841 ccgtgctcctcgccttcctc 59822
>dbj|AB114445.1| Marsupenaeus japonicus ccn mRNA for crustocalcin-b, complete cds Length = 2519 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tcctcgccttcctcttcctc 130 |||||||||||||||||||| Sbjct: 364 tcctcgccttcctcttcctc 345
>dbj|AB114444.1| Marsupenaeus japonicus ccn mRNA for crustocalcin-a, complete cds Length = 2510 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tcctcgccttcctcttcctc 130 |||||||||||||||||||| Sbjct: 364 tcctcgccttcctcttcctc 345
>dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0681F10 Length = 170371 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 cggcgagccgcctccgcctccgcc 193 ||||| |||||||||||||||||| Sbjct: 84989 cggcgcgccgcctccgcctccgcc 85012
>dbj|AP003635.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0686E06 Length = 150474 Score = 40.1 bits (20), Expect = 3.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 40 gcagccaccacctgctgctcctcccccttccc 71 |||||||||||||||| ||||| | ||||||| Sbjct: 99630 gcagccaccacctgcttctccttctccttccc 99661
>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0015E04 Length = 152046 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 gccgcctccgcctccgcccccgga 199 |||||||||||||||||| ||||| Sbjct: 127060 gccgcctccgcctccgccgccgga 127083 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 gccgcctccgcctccgcccccgga 199 |||||||||||||||||| ||||| Sbjct: 89004 gccgcctccgcctccgccgccgga 89027
>dbj|AP003915.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1579_C03 Length = 122851 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gccggcgagccgcctccgcc 187 |||||||||||||||||||| Sbjct: 68913 gccggcgagccgcctccgcc 68932
>dbj|AK104988.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-B08, full insert sequence Length = 1668 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 agccgcctccgcctccgcccccgg 198 ||||||||||||||||||| |||| Sbjct: 677 agccgcctccgcctccgccgccgg 700
>dbj|AK120574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134L11, full insert sequence Length = 2037 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgccccc 196 |||||||||||||||||||| Sbjct: 676 ccgcctccgcctccgccccc 695
>dbj|AK110903.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-B04, full insert sequence Length = 1472 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 cgcctccttgccggcgagccgcct 182 ||||||||||||| |||||||||| Sbjct: 973 cgcctccttgccgacgagccgcct 950
>gb|AF074603.2|AF074603 Streptomyces griseus subsp. griseus nonactin biosynthesis gene cluster, partial sequence Length = 15559 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gccgcctccgcctccgcccc 195 |||||||||||||||||||| Sbjct: 9633 gccgcctccgcctccgcccc 9652
>dbj|AK106234.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-B09, full insert sequence Length = 1834 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 cggcgagccgcctccgcctccgcc 193 ||||| |||||||||||||||||| Sbjct: 592 cggcgcgccgcctccgcctccgcc 615
>dbj|AK073172.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022G13, full insert sequence Length = 1471 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 ccaccacctgctgctcctcc 63 |||||||||||||||||||| Sbjct: 232 ccaccacctgctgctcctcc 213
>dbj|AK069412.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018G09, full insert sequence Length = 2602 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cctcgccttcctcttcctcg 131 |||||||||||||||||||| Sbjct: 392 cctcgccttcctcttcctcg 411
>dbj|AK068136.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134J21, full insert sequence Length = 1726 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gccggcgagccgcctccgcc 187 |||||||||||||||||||| Sbjct: 147 gccggcgagccgcctccgcc 166
>dbj|AK067666.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119H13, full insert sequence Length = 1835 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 agccgcctccgcctccgcccccgg 198 ||||||||||||||||||| |||| Sbjct: 737 agccgcctccgcctccgccgccgg 760
>dbj|AK066909.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091E19, full insert sequence Length = 3145 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccgcctccgcctccgccccc 196 |||||||||||||||||||| Sbjct: 239 ccgcctccgcctccgccccc 258
>dbj|AK066628.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068N15, full insert sequence Length = 2930 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cctcgccttcctcttcctcg 131 |||||||||||||||||||| Sbjct: 389 cctcgccttcctcttcctcg 408
>dbj|AK059984.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-G05, full insert sequence Length = 1077 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 gccgcctccgcctccgcccccgga 199 |||||||||||||||||| ||||| Sbjct: 41 gccgcctccgcctccgccgccgga 64
>gb|AF104910.1|AF104910 Acanthamoeba castellanii myosin I heavy chain kinase gene, complete cds Length = 4730 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 cgcctccgcctccgcccccg 197 |||||||||||||||||||| Sbjct: 2341 cgcctccgcctccgcccccg 2360
>gb|U67056.1|ACU67056 Acanthamoeba castellanii myosin I heavy chain kinase mRNA, complete cds Length = 2537 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 cgcctccgcctccgcccccg 197 |||||||||||||||||||| Sbjct: 613 cgcctccgcctccgcccccg 632
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 cggcgtctccggccgcagcg 228 |||||||||||||||||||| Sbjct: 2868953 cggcgtctccggccgcagcg 2868934 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 ctcggccagcttggcgccgc 147 |||||||||||||||||||| Sbjct: 2463351 ctcggccagcttggcgccgc 2463332
>gb|M75853.1|STMNONR Streptomyces griseus macrotetrolide antibiotic-resistance protein (nonR) gene, complete cds Length = 3332 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gccgcctccgcctccgcccc 195 |||||||||||||||||||| Sbjct: 555 gccgcctccgcctccgcccc 574
>dbj|AB026560.1| Oryza sativa (japonica cultivar-group) OsPAC1 mRNA for alpha 3 subunit of 20S proteasome, complete cds Length = 999 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 gccgcctccgcctccgcccccgga 199 |||||||||||||||||| ||||| Sbjct: 44 gccgcctccgcctccgccgccgga 67 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,605,949 Number of Sequences: 3902068 Number of extensions: 2605949 Number of successful extensions: 89306 Number of sequences better than 10.0: 162 Number of HSP's better than 10.0 without gapping: 169 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 86168 Number of HSP's gapped (non-prelim): 3132 length of query: 275 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 253 effective length of database: 17,147,199,772 effective search space: 4338241542316 effective search space used: 4338241542316 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
