>emb|X80265.1|HVSTRPR H.vulgare mRNA for putative structural protein
          Length = 733

 Score =  365 bits (184), Expect = 4e-98
 Identities = 187/188 (99%)
 Strand = Plus / Plus

                                                                       
Query: 36  caagaacactagttcaggagctagctatcgatggagaagtctaccaagatggtggcggtg 95
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   caagaacactagttcaggagctagctatcgatggagaagtctaccaagatggtggcggtg 60

                                                                       
Query: 96  ctcgtcctcgccgtgctggccgcggcaaccggcgccgaggcgaggaacatcaatacgacg 155
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61  ctcgtcctcgccgtgctggccgcggcaaccggcgccgaggcgaggaacatcaagacgacg 120

                                                                       
Query: 156 gaggcggcagctgccagcaaggacgcggtcctccagccaacgacctttccgccgttcgac 215
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaggcggcagctgccagcaaggacgcggtcctccagccaacgacctttccgccgttcgac 180

                   
Query: 216 cgcttagg 223
           ||||||||
Sbjct: 181 cgcttagg 188

>ref|NM_187859.1| Oryza sativa (japonica cultivar-group), Ozsa8303 predicted mRNA
          Length = 366

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 171 agcaaggacgcggtcctccagccaacgacctttccgccgttcgaccgctt 220
           ||||||||| ||||  | ||||| ||||| || |||||||||||||||||
Sbjct: 109 agcaaggacacggtggtgcagccgacgacgttcccgccgttcgaccgctt 158

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                 
Query: 171     agcaaggacgcggtcctccagccaacgacctttccgccgttcgaccgctt 220
               ||||||||| ||||  | ||||| ||||| || |||||||||||||||||
Sbjct: 8305368 agcaaggacacggtggtgcagccgacgacgttcccgccgttcgaccgctt 8305319

>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0434D08
          Length = 161266

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 171   agcaaggacgcggtcctccagccaacgacctttccgccgttcgaccgctt 220
             ||||||||| ||||  | ||||| ||||| || |||||||||||||||||
Sbjct: 99299 agcaaggacacggtggtgcagccgacgacgttcccgccgttcgaccgctt 99250

>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 116     cgcggcaaccggcgccgaggcgagga 141
               ||||||||| ||||||||||||||||
Sbjct: 2383597 cgcggcaacgggcgccgaggcgagga 2383622

>emb|X67324.1|ZMFS18 Z.mays MFS18 mRNA
          Length = 969

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 128 cgccgaggcgaggaacatcaa 148
           |||||||||||||||||||||
Sbjct: 217 cgccgaggcgaggaacatcaa 237

>gb|AY103988.1| Zea mays PCO070524 mRNA sequence
          Length = 1061

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 128 cgccgaggcgaggaacatcaa 148
           |||||||||||||||||||||
Sbjct: 234 cgccgaggcgaggaacatcaa 254

>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    tttccgccgttcgaccgctt 220
              ||||||||||||||||||||
Sbjct: 190157 tttccgccgttcgaccgctt 190138

>ref|XM_475933.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1719

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 92  ggtgctcgtcctcgccgtgctggccgcg 119
           ||||||||||||||||| ||| ||||||
Sbjct: 237 ggtgctcgtcctcgccgcgctcgccgcg 264

>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    tttccgccgttcgaccgctt 220
              ||||||||||||||||||||
Sbjct: 189964 tttccgccgttcgaccgctt 189945

>gb|AC098571.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B10,
             complete sequence
          Length = 127304

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 92    ggtgctcgtcctcgccgtgctggccgcg 119
             ||||||||||||||||| ||| ||||||
Sbjct: 44947 ggtgctcgtcctcgccgcgctcgccgcg 44920

>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16
          Length = 348580

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 90   gcggtgctcgtcctcgccgtgctg 113
            |||||||||| |||||||||||||
Sbjct: 4436 gcggtgctcggcctcgccgtgctg 4413

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 98      cgtcctcgccgtgctggccg 117
               ||||||||||||||||||||
Sbjct: 1741007 cgtcctcgccgtgctggccg 1741026

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 102     ctcgccgtgctggccgcggc 121
               ||||||||||||||||||||
Sbjct: 2261339 ctcgccgtgctggccgcggc 2261358

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 92       ggtgctcgtcctcgccgtgctggccgcg 119
                ||||||||||||||||| ||| ||||||
Sbjct: 28517254 ggtgctcgtcctcgccgcgctcgccgcg 28517227

>gb|AC126471.4| Homo sapiens 12 BAC RP11-629O19 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 199945

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 72     aagtctaccaagatggtggc 91
              ||||||||||||||||||||
Sbjct: 110034 aagtctaccaagatggtggc 110053

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 95      gctcgtcctcgccgtgctggccgc 118
               |||||||||||||| |||||||||
Sbjct: 4346568 gctcgtcctcgccgcgctggccgc 4346591



 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 100     tcctcgccgtgctggccgcg 119
               ||||||||||||||||||||
Sbjct: 3083343 tcctcgccgtgctggccgcg 3083324

>emb|AJ324223.1|HSA324223 Homo sapiens genomic sequence surrounding NotI site, clone
           NL1-ZF16C
          Length = 761

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 85  tggtggcggtgctcgtcctc 104
           ||||||||||||||||||||
Sbjct: 107 tggtggcggtgctcgtcctc 126

>gb|AY106835.1| Zea mays PCO070523 mRNA sequence
          Length = 727

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 128 cgccgaggcgaggaacatcaatacgacg 155
           ||||||||| ||||||||||| ||||||
Sbjct: 144 cgccgaggcaaggaacatcaagacgacg 171


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,368,927
Number of Sequences: 3902068
Number of extensions: 1368927
Number of successful extensions: 101415
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100400
Number of HSP's gapped (non-prelim): 1015
length of query: 223
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 201
effective length of database: 17,147,199,772
effective search space: 3446587154172
effective search space used: 3446587154172
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)