ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast11d07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 210 bits (106), Expect = 2e-51 Identities = 130/138 (94%) Strand = Plus / Plus Query: 118 aaggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaacttc 177 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2448522 aaggtgccggcggtgatcgtgttcggcgactcgtcggtggacacgggcaacaacaacttc 2448581 Query: 178 atcccgaccatcgcgcggagcaacttctggccgtacgggcgagacttcgcggacggccac 237 |||||||| |||||||||||||||||||||||||||||||| |||| ||| ||||||| | Sbjct: 2448582 atcccgacgatcgcgcggagcaacttctggccgtacgggcgcgactacgctgacggcctc 2448641 Query: 238 cccacgggccgcttctcc 255 ||||| |||||||||||| Sbjct: 2448642 cccaccggccgcttctcc 2448659 Score = 103 bits (52), Expect = 3e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 124 ccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaacttcatcccg 183 |||||| | ||||||||||||||||| ||| |||||||||||||||||||||||||| | Sbjct: 3531722 ccggcggtgatcgtgttcggcgactccacggcggacacgggcaacaacaacttcatccag 3531663 Query: 184 accatcgcgcggagcaacttctggccgtacgggcgagacttcgc 227 ||||| ||| || |||||| | |||||||||||| |||||||| Sbjct: 3531662 accatggcgaggggcaactacccgccgtacgggcgggacttcgc 3531619 Score = 69.9 bits (35), Expect = 4e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 119 aggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaacttca 178 |||| |||||||||||||||||||| |||||| |||| ||| | ||||||||||||| || Sbjct: 2405738 aggtcccggcgatcatcgtgttcggggactcgacggtcgacgccggcaacaacaactaca 2405797 Query: 179 tcc 181 ||| Sbjct: 2405798 tcc 2405800
>dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0095O23 Length = 159792 Score = 210 bits (106), Expect = 2e-51 Identities = 130/138 (94%) Strand = Plus / Plus Query: 118 aaggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaacttc 177 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126932 aaggtgccggcggtgatcgtgttcggcgactcgtcggtggacacgggcaacaacaacttc 126991 Query: 178 atcccgaccatcgcgcggagcaacttctggccgtacgggcgagacttcgcggacggccac 237 |||||||| |||||||||||||||||||||||||||||||| |||| ||| ||||||| | Sbjct: 126992 atcccgacgatcgcgcggagcaacttctggccgtacgggcgcgactacgctgacggcctc 127051 Query: 238 cccacgggccgcttctcc 255 ||||| |||||||||||| Sbjct: 127052 cccaccggccgcttctcc 127069 Score = 69.9 bits (35), Expect = 4e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 119 aggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaacttca 178 |||| |||||||||||||||||||| |||||| |||| ||| | ||||||||||||| || Sbjct: 84148 aggtcccggcgatcatcgtgttcggggactcgacggtcgacgccggcaacaacaactaca 84207 Query: 179 tcc 181 ||| Sbjct: 84208 tcc 84210
>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0406E03 Length = 201069 Score = 210 bits (106), Expect = 2e-51 Identities = 130/138 (94%) Strand = Plus / Plus Query: 118 aaggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaacttc 177 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35112 aaggtgccggcggtgatcgtgttcggcgactcgtcggtggacacgggcaacaacaacttc 35171 Query: 178 atcccgaccatcgcgcggagcaacttctggccgtacgggcgagacttcgcggacggccac 237 |||||||| |||||||||||||||||||||||||||||||| |||| ||| ||||||| | Sbjct: 35172 atcccgacgatcgcgcggagcaacttctggccgtacgggcgcgactacgctgacggcctc 35231 Query: 238 cccacgggccgcttctcc 255 ||||| |||||||||||| Sbjct: 35232 cccaccggccgcttctcc 35249
>dbj|AK059484.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F09, full insert sequence Length = 1326 Score = 210 bits (106), Expect = 2e-51 Identities = 130/138 (94%) Strand = Plus / Plus Query: 118 aaggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaacttc 177 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136 aaggtgccggcggtgatcgtgttcggcgactcgtcggtggacacgggcaacaacaacttc 195 Query: 178 atcccgaccatcgcgcggagcaacttctggccgtacgggcgagacttcgcggacggccac 237 |||||||| |||||||||||||||||||||||||||||||| |||| ||| ||||||| | Sbjct: 196 atcccgacgatcgcgcggagcaacttctggccgtacgggcgcgactacgctgacggcctc 255 Query: 238 cccacgggccgcttctcc 255 ||||| |||||||||||| Sbjct: 256 cccaccggccgcttctcc 273
>dbj|AK059766.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-G04, full insert sequence Length = 1134 Score = 202 bits (102), Expect = 4e-49 Identities = 129/138 (93%) Strand = Plus / Plus Query: 118 aaggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaacttc 177 |||||||||||| | || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 133 aaggtgccggcggtgattgtgttcggcgactcgtcggtggacacgggcaacaacaacttc 192 Query: 178 atcccgaccatcgcgcggagcaacttctggccgtacgggcgagacttcgcggacggccac 237 |||||||| |||||||||||||||||||||||||||||||| |||| ||| ||||||| | Sbjct: 193 atcccgacgatcgcgcggagcaacttctggccgtacgggcgcgactacgctgacggcctc 252 Query: 238 cccacgggccgcttctcc 255 ||||| |||||||||||| Sbjct: 253 cccaccggccgcttctcc 270
>ref|XM_450256.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1183 Score = 103 bits (52), Expect = 3e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 124 ccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaacttcatcccg 183 |||||| | ||||||||||||||||| ||| |||||||||||||||||||||||||| | Sbjct: 140 ccggcggtgatcgtgttcggcgactccacggcggacacgggcaacaacaacttcatccag 199 Query: 184 accatcgcgcggagcaacttctggccgtacgggcgagacttcgc 227 ||||| ||| || |||||| | |||||||||||| |||||||| Sbjct: 200 accatggcgaggggcaactacccgccgtacgggcgggacttcgc 243
>dbj|AP005571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1451_A02 Length = 135861 Score = 103 bits (52), Expect = 3e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 124 ccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaacttcatcccg 183 |||||| | ||||||||||||||||| ||| |||||||||||||||||||||||||| | Sbjct: 84610 ccggcggtgatcgtgttcggcgactccacggcggacacgggcaacaacaacttcatccag 84551 Query: 184 accatcgcgcggagcaacttctggccgtacgggcgagacttcgc 227 ||||| ||| || |||||| | |||||||||||| |||||||| Sbjct: 84550 accatggcgaggggcaactacccgccgtacgggcgggacttcgc 84507
>dbj|AP005587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0499G10 Length = 158375 Score = 103 bits (52), Expect = 3e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 124 ccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaacttcatcccg 183 |||||| | ||||||||||||||||| ||| |||||||||||||||||||||||||| | Sbjct: 17497 ccggcggtgatcgtgttcggcgactccacggcggacacgggcaacaacaacttcatccag 17438 Query: 184 accatcgcgcggagcaacttctggccgtacgggcgagacttcgc 227 ||||| ||| || |||||| | |||||||||||| |||||||| Sbjct: 17437 accatggcgaggggcaactacccgccgtacgggcgggacttcgc 17394
>dbj|AK107173.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-G06, full insert sequence Length = 1183 Score = 103 bits (52), Expect = 3e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 124 ccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaacttcatcccg 183 |||||| | ||||||||||||||||| ||| |||||||||||||||||||||||||| | Sbjct: 140 ccggcggtgatcgtgttcggcgactccacggcggacacgggcaacaacaacttcatccag 199 Query: 184 accatcgcgcggagcaacttctggccgtacgggcgagacttcgc 227 ||||| ||| || |||||| | |||||||||||| |||||||| Sbjct: 200 accatggcgaggggcaactacccgccgtacgggcgggacttcgc 243
>ref|XM_464399.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1134 Score = 77.8 bits (39), Expect = 2e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 125 cggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaact 175 ||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 110 cggcgatcatcgtgttcggcgactccacggtcgacacgggcaacaacaact 160
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 77.8 bits (39), Expect = 2e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 125 cggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaact 175 ||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 4942881 cggcgatcatcgtgttcggcgactccacggtcgacacgggcaacaacaact 4942931 Score = 61.9 bits (31), Expect = 9e-07 Identities = 49/55 (89%) Strand = Plus / Plus Query: 120 ggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaac 174 |||| ||||| | ||||||||||| |||||| ||||||||||||| ||||||||| Sbjct: 4944854 ggtgacggcggtgatcgtgttcggggactcgacggtggacacggggaacaacaac 4944908 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 118 aaggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaa 173 ||||| ||||||||| ||||||||||||||||| |||| ||| | || |||||||| Sbjct: 1046343 aaggttccggcgatcttcgtgttcggcgactcgacggtcgacgccgggaacaacaa 1046398 Score = 54.0 bits (27), Expect = 2e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 120 ggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaac 174 |||| ||||| | |||||||||||||||||| |||||||| | || ||||||||| Sbjct: 15410466 ggtgacggcggtgatcgtgttcggcgactcgacggtggacgccgggaacaacaac 15410520 Score = 52.0 bits (26), Expect = 9e-04 Identities = 38/42 (90%) Strand = Plus / Minus Query: 134 tcgtgttcggcgactcgtcggtggacacgggcaacaacaact 175 ||||||||||||||||| |||| ||| |||||||||||||| Sbjct: 27176386 tcgtgttcggcgactcgacggttgacgtgggcaacaacaact 27176345 Score = 42.1 bits (21), Expect = 0.83 Identities = 24/25 (96%) Strand = Plus / Minus Query: 135 cgtgttcggcgactcgtcggtggac 159 |||||||||||||||| |||||||| Sbjct: 30985731 cgtgttcggcgactcgacggtggac 30985707 Score = 40.1 bits (20), Expect = 3.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 118 aaggtgccggcgatcatcgtgttcggcgactc 149 |||||||||||||| ||||||||||||||| Sbjct: 27181100 aaggtgccggcgatatacgtgttcggcgactc 27181069
>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0031B09 Length = 132729 Score = 77.8 bits (39), Expect = 2e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 125 cggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaact 175 ||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 14007 cggcgatcatcgtgttcggcgactccacggtcgacacgggcaacaacaact 14057 Score = 61.9 bits (31), Expect = 9e-07 Identities = 49/55 (89%) Strand = Plus / Plus Query: 120 ggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaac 174 |||| ||||| | ||||||||||| |||||| ||||||||||||| ||||||||| Sbjct: 15980 ggtgacggcggtgatcgtgttcggggactcgacggtggacacggggaacaacaac 16034
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_F01 Length = 113755 Score = 77.8 bits (39), Expect = 2e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 125 cggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaact 175 ||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 87620 cggcgatcatcgtgttcggcgactccacggtcgacacgggcaacaacaact 87670 Score = 61.9 bits (31), Expect = 9e-07 Identities = 49/55 (89%) Strand = Plus / Plus Query: 120 ggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaac 174 |||| ||||| | ||||||||||| |||||| ||||||||||||| ||||||||| Sbjct: 89593 ggtgacggcggtgatcgtgttcggggactcgacggtggacacggggaacaacaac 89647
>dbj|AK108567.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-C12, full insert sequence Length = 1426 Score = 77.8 bits (39), Expect = 2e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 125 cggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaact 175 ||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 123 cggcgatcatcgtgttcggcgactccacggtcgacacgggcaacaacaact 173
>dbj|AK061026.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-F09, full insert sequence Length = 1248 Score = 69.9 bits (35), Expect = 4e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 119 aggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaacttca 178 |||| |||||||||||||||||||| |||||| |||| ||| | ||||||||||||| || Sbjct: 107 aggtcccggcgatcatcgtgttcggggactcgacggtcgacgccggcaacaacaactaca 166 Query: 179 tcc 181 ||| Sbjct: 167 tcc 169
>dbj|AK060124.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-H03, full insert sequence Length = 1077 Score = 69.9 bits (35), Expect = 4e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 119 aggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaacttca 178 |||| |||||||||||||||||||| |||||| |||| ||| | ||||||||||||| || Sbjct: 107 aggtcccggcgatcatcgtgttcggggactcgacggtcgacgccggcaacaacaactaca 166 Query: 179 tcc 181 ||| Sbjct: 167 tcc 169
>ref|NM_194799.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0029P06.17), mRNA Length = 351 Score = 65.9 bits (33), Expect = 6e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 138 gttcggcgactcgtcggtggacacgggcaacaacaacttcatcccgaccatcg 190 ||||||||||||| |||||||||||||||||||||| | |||||||||||| Sbjct: 126 gttcggcgactcgatcgtggacacgggcaacaacaactacctcccgaccatcg 178
>gb|AC112513.1| Oryza sativa chromosome 10 clone OSJNAa0029P06, complete sequence Length = 122319 Score = 65.9 bits (33), Expect = 6e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 138 gttcggcgactcgtcggtggacacgggcaacaacaacttcatcccgaccatcg 190 ||||||||||||| |||||||||||||||||||||| | |||||||||||| Sbjct: 36952 gttcggcgactcgatcgtggacacgggcaacaacaactacctcccgaccatcg 37004
>gb|AC090873.4| Oryza sativa chromosome 10 clone OSJNBa0029P06, complete sequence Length = 151533 Score = 65.9 bits (33), Expect = 6e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 138 gttcggcgactcgtcggtggacacgggcaacaacaacttcatcccgaccatcg 190 ||||||||||||| |||||||||||||||||||||| | |||||||||||| Sbjct: 128485 gttcggcgactcgatcgtggacacgggcaacaacaactacctcccgaccatcg 128537
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 65.9 bits (33), Expect = 6e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 138 gttcggcgactcgtcggtggacacgggcaacaacaacttcatcccgaccatcg 190 ||||||||||||| |||||||||||||||||||||| | |||||||||||| Sbjct: 2471753 gttcggcgactcgatcgtggacacgggcaacaacaactacctcccgaccatcg 2471805 Score = 44.1 bits (22), Expect = 0.21 Identities = 37/42 (88%) Strand = Plus / Plus Query: 134 tcgtgttcggcgactcgtcggtggacacgggcaacaacaact 175 ||||||||||||||||| |||||||| ||||| ||||||| Sbjct: 16556890 tcgtgttcggcgactcgctggtggacaacggcaataacaact 16556931
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 65.9 bits (33), Expect = 6e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 118 aaggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaa 170 |||||||||||| | ||||||||||| |||||| ||||||||||||| ||||| Sbjct: 25492461 aaggtgccggcggtgatcgtgttcggggactcgacggtggacacggggaacaa 25492409
>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0523F01 Length = 146419 Score = 65.9 bits (33), Expect = 6e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 118 aaggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaa 170 |||||||||||| | ||||||||||| |||||| ||||||||||||| ||||| Sbjct: 10778 aaggtgccggcggtgatcgtgttcggggactcgacggtggacacggggaacaa 10726
>dbj|AK100609.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107L07, full insert sequence Length = 1299 Score = 65.9 bits (33), Expect = 6e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 138 gttcggcgactcgtcggtggacacgggcaacaacaacttcatcccgaccatcg 190 ||||||||||||| |||||||||||||||||||||| | |||||||||||| Sbjct: 157 gttcggcgactcgatcgtggacacgggcaacaacaactacctcccgaccatcg 209
>dbj|AK058562.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-D11, full insert sequence Length = 1388 Score = 65.9 bits (33), Expect = 6e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 118 aaggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaa 170 |||||||||||| | ||||||||||| |||||| ||||||||||||| ||||| Sbjct: 216 aaggtgccggcggtgatcgtgttcggggactcgacggtggacacggggaacaa 268
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 65.9 bits (33), Expect = 6e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 138 gttcggcgactcgtcggtggacacgggcaacaacaacttcatcccgaccatcg 190 ||||||||||||| |||||||||||||||||||||| | |||||||||||| Sbjct: 2471704 gttcggcgactcgatcgtggacacgggcaacaacaactacctcccgaccatcg 2471756 Score = 44.1 bits (22), Expect = 0.21 Identities = 37/42 (88%) Strand = Plus / Plus Query: 134 tcgtgttcggcgactcgtcggtggacacgggcaacaacaact 175 ||||||||||||||||| |||||||| ||||| ||||||| Sbjct: 16565131 tcgtgttcggcgactcgctggtggacaacggcaataacaact 16565172
>ref|XM_464400.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1310 Score = 61.9 bits (31), Expect = 9e-07 Identities = 49/55 (89%) Strand = Plus / Plus Query: 120 ggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaac 174 |||| ||||| | ||||||||||| |||||| ||||||||||||| ||||||||| Sbjct: 170 ggtgacggcggtgatcgtgttcggggactcgacggtggacacggggaacaacaac 224
>emb|AJ606032.1| Triticum aestivum partial mRNA for putative GDSL-motif lipase (at2G04570 gene) Length = 432 Score = 61.9 bits (31), Expect = 9e-07 Identities = 49/55 (89%) Strand = Plus / Plus Query: 120 ggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaac 174 |||| ||||| | |||||||||||||||||| |||||||| |||| ||||||||| Sbjct: 99 ggtgacggcgctgatcgtgttcggcgactcgacggtggacgcggggaacaacaac 153
>dbj|AK060691.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-C02, full insert sequence Length = 1310 Score = 61.9 bits (31), Expect = 9e-07 Identities = 49/55 (89%) Strand = Plus / Plus Query: 120 ggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaac 174 |||| ||||| | ||||||||||| |||||| ||||||||||||| ||||||||| Sbjct: 170 ggtgacggcggtgatcgtgttcggggactcgacggtggacacggggaacaacaac 224
>ref|XM_463902.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1137 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 118 aaggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaa 173 ||||| ||||||||| ||||||||||||||||| |||| ||| | || |||||||| Sbjct: 97 aaggttccggcgatcttcgtgttcggcgactcgacggtcgacgccgggaacaacaa 152
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0088N06 Length = 123454 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 118 aaggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaa 173 ||||| ||||||||| ||||||||||||||||| |||| ||| | || |||||||| Sbjct: 35051 aaggttccggcgatcttcgtgttcggcgactcgacggtcgacgccgggaacaacaa 35106
>dbj|AP004084.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1217_F02 Length = 118822 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 118 aaggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaa 173 ||||| ||||||||| ||||||||||||||||| |||| ||| | || |||||||| Sbjct: 117762 aaggttccggcgatcttcgtgttcggcgactcgacggtcgacgccgggaacaacaa 117817
>ref|XM_465469.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1014 Score = 54.0 bits (27), Expect = 2e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 120 ggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaac 174 |||| ||||| | |||||||||||||||||| |||||||| | || ||||||||| Sbjct: 99 ggtgacggcggtgatcgtgttcggcgactcgacggtggacgccgggaacaacaac 153
>dbj|AP005650.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078K05 Length = 162901 Score = 54.0 bits (27), Expect = 2e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 120 ggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaac 174 |||| ||||| | |||||||||||||||||| |||||||| | || ||||||||| Sbjct: 81248 ggtgacggcggtgatcgtgttcggcgactcgacggtggacgccgggaacaacaac 81302
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1725_H08 Length = 155431 Score = 52.0 bits (26), Expect = 9e-04 Identities = 38/42 (90%) Strand = Plus / Minus Query: 134 tcgtgttcggcgactcgtcggtggacacgggcaacaacaact 175 ||||||||||||||||| |||| ||| |||||||||||||| Sbjct: 72835 tcgtgttcggcgactcgacggttgacgtgggcaacaacaact 72794 Score = 40.1 bits (20), Expect = 3.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 118 aaggtgccggcgatcatcgtgttcggcgactc 149 |||||||||||||| ||||||||||||||| Sbjct: 77549 aaggtgccggcgatatacgtgttcggcgactc 77518
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684A08 Length = 137841 Score = 52.0 bits (26), Expect = 9e-04 Identities = 38/42 (90%) Strand = Plus / Minus Query: 134 tcgtgttcggcgactcgtcggtggacacgggcaacaacaact 175 ||||||||||||||||| |||| ||| |||||||||||||| Sbjct: 27057 tcgtgttcggcgactcgacggttgacgtgggcaacaacaact 27016 Score = 40.1 bits (20), Expect = 3.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 118 aaggtgccggcgatcatcgtgttcggcgactc 149 |||||||||||||| ||||||||||||||| Sbjct: 31771 aaggtgccggcgatatacgtgttcggcgactc 31740
>ref|XM_475407.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1083 Score = 50.1 bits (25), Expect = 0.003 Identities = 34/37 (91%) Strand = Plus / Plus Query: 138 gttcggcgactcgtcggtggacacgggcaacaacaac 174 ||||||||||||| || ||||| |||||||||||||| Sbjct: 135 gttcggcgactcgacgctggacccgggcaacaacaac 171
>gb|AC112159.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_C01, complete sequence Length = 114236 Score = 50.1 bits (25), Expect = 0.003 Identities = 34/37 (91%) Strand = Plus / Minus Query: 138 gttcggcgactcgtcggtggacacgggcaacaacaac 174 ||||||||||||| || ||||| |||||||||||||| Sbjct: 47836 gttcggcgactcgacgctggacccgggcaacaacaac 47800
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 50.1 bits (25), Expect = 0.003 Identities = 34/37 (91%) Strand = Plus / Minus Query: 138 gttcggcgactcgtcggtggacacgggcaacaacaac 174 ||||||||||||| || ||||| |||||||||||||| Sbjct: 22849132 gttcggcgactcgacgctggacccgggcaacaacaac 22849096 Score = 42.1 bits (21), Expect = 0.83 Identities = 36/41 (87%) Strand = Plus / Minus Query: 134 tcgtgttcggcgactcgtcggtggacacgggcaacaacaac 174 |||||||||| |||||| |||||||| |||||||||||| Sbjct: 25484576 tcgtgttcggggactcgctggtggacaacggcaacaacaac 25484536
>dbj|AK064681.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-A05, full insert sequence Length = 1385 Score = 50.1 bits (25), Expect = 0.003 Identities = 34/37 (91%) Strand = Plus / Plus Query: 138 gttcggcgactcgtcggtggacacgggcaacaacaac 174 ||||||||||||| || ||||| |||||||||||||| Sbjct: 175 gttcggcgactcgacgctggacccgggcaacaacaac 211
>ref|XM_470499.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1098 Score = 46.1 bits (23), Expect = 0.053 Identities = 29/31 (93%) Strand = Plus / Plus Query: 120 ggtgccggcgatcatcgtgttcggcgactcg 150 |||||||||| | |||||||||||||||||| Sbjct: 120 ggtgccggcggtgatcgtgttcggcgactcg 150
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.053 Identities = 29/31 (93%) Strand = Plus / Minus Query: 120 ggtgccggcgatcatcgtgttcggcgactcg 150 |||||||||| | |||||||||||||||||| Sbjct: 35955194 ggtgccggcggtgatcgtgttcggcgactcg 35955164
>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete sequence Length = 164179 Score = 46.1 bits (23), Expect = 0.053 Identities = 29/31 (93%) Strand = Plus / Minus Query: 120 ggtgccggcgatcatcgtgttcggcgactcg 150 |||||||||| | |||||||||||||||||| Sbjct: 16705 ggtgccggcggtgatcgtgttcggcgactcg 16675
>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete sequence Length = 145115 Score = 46.1 bits (23), Expect = 0.053 Identities = 29/31 (93%) Strand = Plus / Plus Query: 120 ggtgccggcgatcatcgtgttcggcgactcg 150 |||||||||| | |||||||||||||||||| Sbjct: 5987 ggtgccggcggtgatcgtgttcggcgactcg 6017
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.053 Identities = 29/31 (93%) Strand = Plus / Minus Query: 120 ggtgccggcgatcatcgtgttcggcgactcg 150 |||||||||| | |||||||||||||||||| Sbjct: 36045268 ggtgccggcggtgatcgtgttcggcgactcg 36045238
>dbj|AK109857.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-G08, full insert sequence Length = 1648 Score = 46.1 bits (23), Expect = 0.053 Identities = 29/31 (93%) Strand = Plus / Plus Query: 120 ggtgccggcgatcatcgtgttcggcgactcg 150 |||||||||| | |||||||||||||||||| Sbjct: 310 ggtgccggcggtgatcgtgttcggcgactcg 340
>dbj|AK060992.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-D07, full insert sequence Length = 1480 Score = 46.1 bits (23), Expect = 0.053 Identities = 29/31 (93%) Strand = Plus / Plus Query: 120 ggtgccggcgatcatcgtgttcggcgactcg 150 |||||||||| | |||||||||||||||||| Sbjct: 310 ggtgccggcggtgatcgtgttcggcgactcg 340
>ref|XM_483839.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1523 Score = 44.1 bits (22), Expect = 0.21 Identities = 37/42 (88%) Strand = Plus / Plus Query: 134 tcgtgttcggcgactcgtcggtggacacgggcaacaacaact 175 ||||||| ||||||||| |||||||| ||||||||||||| Sbjct: 223 tcgtgtttggcgactcgctggtggacagcggcaacaacaact 264
>ref|NM_196893.1| Oryza sativa (japonica cultivar-group) putative early nodulin gene (Enod) related protein (OSJNBa0071K18.9), mRNA Length = 1384 Score = 44.1 bits (22), Expect = 0.21 Identities = 37/42 (88%) Strand = Plus / Plus Query: 134 tcgtgttcggcgactcgtcggtggacacgggcaacaacaact 175 ||||||||||||||||| |||||||| ||||| ||||||| Sbjct: 121 tcgtgttcggcgactcgctggtggacaacggcaataacaact 162
>ref|XM_473495.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1104 Score = 44.1 bits (22), Expect = 0.21 Identities = 49/58 (84%) Strand = Plus / Plus Query: 120 ggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaacttc 177 ||||||||| || |||||||||| ||||| |||||||| ||||||||||||||| Sbjct: 87 ggtgccggccatgttcgtgttcggggactccacggtggacgtcggcaacaacaacttc 144
>gb|BT018454.1| Zea mays clone EL01N0408D11.d mRNA sequence Length = 1429 Score = 44.1 bits (22), Expect = 0.21 Identities = 49/58 (84%) Strand = Plus / Plus Query: 118 aaggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaact 175 |||||||||||||| ||||||||||||||| ||| |||| ||||| |||||||| Sbjct: 206 aaggtgccggcgatgtacgtgttcggcgactccacggcggacgtgggcaccaacaact 263
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete sequence Length = 149758 Score = 44.1 bits (22), Expect = 0.21 Identities = 37/42 (88%) Strand = Plus / Minus Query: 134 tcgtgttcggcgactcgtcggtggacacgggcaacaacaact 175 ||||||||||||||||| |||||||| ||||| ||||||| Sbjct: 103352 tcgtgttcggcgactcgctggtggacaacggcaataacaact 103311
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 44.1 bits (22), Expect = 0.21 Identities = 49/58 (84%) Strand = Plus / Minus Query: 120 ggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaacttc 177 ||||||||| || |||||||||| ||||| |||||||| ||||||||||||||| Sbjct: 105514 ggtgccggccatgttcgtgttcggggactccacggtggacgtcggcaacaacaacttc 105457
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.21 Identities = 49/58 (84%) Strand = Plus / Minus Query: 120 ggtgccggcgatcatcgtgttcggcgactcgtcggtggacacgggcaacaacaacttc 177 ||||||||| || |||||||||| ||||| |||||||| ||||||||||||||| Sbjct: 28098289 ggtgccggccatgttcgtgttcggggactccacggtggacgtcggcaacaacaacttc 28098232
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.21 Identities = 37/42 (88%) Strand = Plus / Plus Query: 134 tcgtgttcggcgactcgtcggtggacacgggcaacaacaact 175 ||||||| ||||||||| |||||||| ||||||||||||| Sbjct: 28339357 tcgtgtttggcgactcgctggtggacagcggcaacaacaact 28339398
>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0044E16 Length = 153296 Score = 44.1 bits (22), Expect = 0.21 Identities = 37/42 (88%) Strand = Plus / Plus Query: 134 tcgtgttcggcgactcgtcggtggacacgggcaacaacaact 175 ||||||| ||||||||| |||||||| ||||||||||||| Sbjct: 68163 tcgtgtttggcgactcgctggtggacagcggcaacaacaact 68204
>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0705A05 Length = 143765 Score = 44.1 bits (22), Expect = 0.21 Identities = 37/42 (88%) Strand = Plus / Plus Query: 134 tcgtgttcggcgactcgtcggtggacacgggcaacaacaact 175 ||||||| ||||||||| |||||||| ||||||||||||| Sbjct: 131172 tcgtgtttggcgactcgctggtggacagcggcaacaacaact 131213
>dbj|AK108201.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C12, full insert sequence Length = 1375 Score = 44.1 bits (22), Expect = 0.21 Identities = 37/42 (88%) Strand = Plus / Plus Query: 134 tcgtgttcggcgactcgtcggtggacacgggcaacaacaact 175 ||||||||||||||||| |||||||| ||||| ||||||| Sbjct: 133 tcgtgttcggcgactcgctggtggacaacggcaataacaact 174
>dbj|AK106778.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-H02, full insert sequence Length = 1523 Score = 44.1 bits (22), Expect = 0.21 Identities = 37/42 (88%) Strand = Plus / Plus Query: 134 tcgtgttcggcgactcgtcggtggacacgggcaacaacaact 175 ||||||| ||||||||| |||||||| ||||||||||||| Sbjct: 223 tcgtgtttggcgactcgctggtggacagcggcaacaacaact 264
>ref|XM_475723.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1098 Score = 42.1 bits (21), Expect = 0.83 Identities = 36/41 (87%) Strand = Plus / Plus Query: 134 tcgtgttcggcgactcgtcggtggacacgggcaacaacaac 174 |||||||||| |||||| |||||||| |||||||||||| Sbjct: 101 tcgtgttcggggactcgctggtggacaacggcaacaacaac 141
>ref|XM_467708.1| Oryza sativa (japonica cultivar-group), mRNA Length = 872 Score = 42.1 bits (21), Expect = 0.83 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 cgtgttcggcgactcgtcggtggac 159 |||||||||||||||| |||||||| Sbjct: 362 cgtgttcggcgactcgacggtggac 386
>ref|XM_506961.1| PREDICTED Oryza sativa (japonica cultivar-group), P0516G10.12-1 mRNA Length = 1637 Score = 42.1 bits (21), Expect = 0.83 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 cgtgttcggcgactcgtcggtggac 159 |||||||||||||||| |||||||| Sbjct: 359 cgtgttcggcgactcgacggtggac 383
>ref|XM_467707.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1637 Score = 42.1 bits (21), Expect = 0.83 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 cgtgttcggcgactcgtcggtggac 159 |||||||||||||||| |||||||| Sbjct: 358 cgtgttcggcgactcgacggtggac 382
>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04, complete sequence Length = 169073 Score = 42.1 bits (21), Expect = 0.83 Identities = 36/41 (87%) Strand = Plus / Minus Query: 134 tcgtgttcggcgactcgtcggtggacacgggcaacaacaac 174 |||||||||| |||||| |||||||| |||||||||||| Sbjct: 985 tcgtgttcggggactcgctggtggacaacggcaacaacaac 945
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 42.1 bits (21), Expect = 0.83 Identities = 36/41 (87%) Strand = Plus / Minus Query: 134 tcgtgttcggcgactcgtcggtggacacgggcaacaacaac 174 |||||||||| |||||| |||||||| |||||||||||| Sbjct: 124937 tcgtgttcggggactcgctggtggacaacggcaacaacaac 124897
>ref|XM_701291.1| PREDICTED: Danio rerio hypothetical protein LOC566415 (LOC566415), mRNA Length = 706 Score = 42.1 bits (21), Expect = 0.83 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ctggctagctagctatcaatg 21 ||||||||||||||||||||| Sbjct: 233 ctggctagctagctatcaatg 213
>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516G10 Length = 148937 Score = 42.1 bits (21), Expect = 0.83 Identities = 24/25 (96%) Strand = Plus / Minus Query: 135 cgtgttcggcgactcgtcggtggac 159 |||||||||||||||| |||||||| Sbjct: 40687 cgtgttcggcgactcgacggtggac 40663
>dbj|AK111360.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-H05, full insert sequence Length = 888 Score = 42.1 bits (21), Expect = 0.83 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 cgtgttcggcgactcgtcggtggac 159 |||||||||||||||| |||||||| Sbjct: 362 cgtgttcggcgactcgacggtggac 386
>dbj|AK099325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033016K19, full insert sequence Length = 1637 Score = 42.1 bits (21), Expect = 0.83 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 cgtgttcggcgactcgtcggtggac 159 |||||||||||||||| |||||||| Sbjct: 358 cgtgttcggcgactcgacggtggac 382
>dbj|AK070261.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042P13, full insert sequence Length = 1637 Score = 42.1 bits (21), Expect = 0.83 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 cgtgttcggcgactcgtcggtggac 159 |||||||||||||||| |||||||| Sbjct: 359 cgtgttcggcgactcgacggtggac 383
>dbj|AK061147.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-D08, full insert sequence Length = 1315 Score = 42.1 bits (21), Expect = 0.83 Identities = 36/41 (87%) Strand = Plus / Plus Query: 134 tcgtgttcggcgactcgtcggtggacacgggcaacaacaac 174 |||||||||| |||||| |||||||| |||||||||||| Sbjct: 165 tcgtgttcggggactcgctggtggacaacggcaacaacaac 205
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ccggtaaggtgccggcgatc 132 |||||||||||||||||||| Sbjct: 427978 ccggtaaggtgccggcgatc 427997
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gccggcgatcatcgtgttcg 142 |||||||||||||||||||| Sbjct: 4352778 gccggcgatcatcgtgttcg 4352759
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13 Length = 342416 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ccggtaaggtgccggcgatc 132 |||||||||||||||||||| Sbjct: 85923 ccggtaaggtgccggcgatc 85942
>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16 Length = 349841 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gccggcgatcatcgtgttcg 142 |||||||||||||||||||| Sbjct: 329969 gccggcgatcatcgtgttcg 329950
>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14 Length = 324050 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ccggtaaggtgccggcgatc 132 |||||||||||||||||||| Sbjct: 85847 ccggtaaggtgccggcgatc 85866
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 gccggtaaggtgccggcgatcatc 135 ||||| |||||||||||||||||| Sbjct: 3352031 gccggcaaggtgccggcgatcatc 3352008 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gccggcgatcatcgtgttcg 142 |||||||||||||||||||| Sbjct: 1491218 gccggcgatcatcgtgttcg 1491237
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 3.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 139 ttcggcgactcgtcggtggacacgggcaacaacaac 174 |||||||||||| |||||||| |||||||||||| Sbjct: 10070980 ttcggcgactcgctggtggacagcggcaacaacaac 10070945
>dbj|AK103585.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133B12, full insert sequence Length = 1312 Score = 40.1 bits (20), Expect = 3.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 118 aaggtgccggcgatcatcgtgttcggcgactc 149 |||||||||||||| ||||||||||||||| Sbjct: 96 aaggtgccggcgatatacgtgttcggcgactc 127
>dbj|AK103166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121E13, full insert sequence Length = 2958 Score = 40.1 bits (20), Expect = 3.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 118 aaggtgccggcgatcatcgtgttcggcgactc 149 |||||||||||||| ||||||||||||||| Sbjct: 115 aaggtgccggcgatatacgtgttcggcgactc 146
>dbj|AK063071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-H02, full insert sequence Length = 987 Score = 40.1 bits (20), Expect = 3.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 139 ttcggcgactcgtcggtggacacgggcaacaacaac 174 |||||||||||| |||||||| |||||||||||| Sbjct: 176 ttcggcgactcgctggtggacagcggcaacaacaac 211
>dbj|AK059531.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-D08, full insert sequence Length = 1451 Score = 40.1 bits (20), Expect = 3.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 118 aaggtgccggcgatcatcgtgttcggcgactc 149 |||||||||||||| ||||||||||||||| Sbjct: 115 aaggtgccggcgatatacgtgttcggcgactc 146
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 3.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 139 ttcggcgactcgtcggtggacacgggcaacaacaac 174 |||||||||||| |||||||| |||||||||||| Sbjct: 10070865 ttcggcgactcgctggtggacagcggcaacaacaac 10070830
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 40.1 bits (20), Expect = 3.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 139 ttcggcgactcgtcggtggacacgggcaacaacaac 174 |||||||||||| |||||||| |||||||||||| Sbjct: 91641 ttcggcgactcgctggtggacagcggcaacaacaac 91676 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,041,026 Number of Sequences: 3902068 Number of extensions: 1041026 Number of successful extensions: 17302 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 16873 Number of HSP's gapped (non-prelim): 429 length of query: 255 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 233 effective length of database: 17,147,199,772 effective search space: 3995297546876 effective search space used: 3995297546876 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
