ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast11b12 |
|---|---|
| Clone Library Name | barley_pub |
>NIA2_TOBAC (P08509) Nitrate reductase [NADH] 2 (EC 1.7.1.1) (NR2)| Length = 904 Score = 31.6 bits (70), Expect = 0.59 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +1 Query: 136 RMISTKELQAHAAADDLWISISGDVYD 216 +M S E++ H++AD WI + G +YD Sbjct: 532 KMYSMSEVRKHSSADSAWIIVHGHIYD 558
>NIA1_TOBAC (P11605) Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR1)| Length = 904 Score = 31.6 bits (70), Expect = 0.59 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +1 Query: 136 RMISTKELQAHAAADDLWISISGDVYD 216 +M S E++ H++AD WI + G +YD Sbjct: 532 KMYSMSEVRKHSSADSAWIIVHGHIYD 558
>NIA_FUSOX (P39863) Nitrate reductase [NADPH] (EC 1.7.1.3) (NR)| Length = 905 Score = 31.2 bits (69), Expect = 0.77 Identities = 11/27 (40%), Positives = 19/27 (70%) Frame = +1 Query: 136 RMISTKELQAHAAADDLWISISGDVYD 216 R I+ +EL+AH+ ++ W + G+VYD Sbjct: 547 RKITIEELKAHSGEEEPWFVVKGEVYD 573
>NIA_PETHY (P36859) Nitrate reductase [NADH] (EC 1.7.1.1) (NR)| Length = 909 Score = 30.8 bits (68), Expect = 1.0 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +1 Query: 136 RMISTKELQAHAAADDLWISISGDVYD 216 +M S E++ H +AD WI + G VYD Sbjct: 536 KMYSMSEVKKHNSADSAWIIVHGHVYD 562
>NIA2_PHAVU (P39866) Nitrate reductase [NADH] 2 (EC 1.7.1.1) (NR-2)| Length = 890 Score = 30.8 bits (68), Expect = 1.0 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +1 Query: 136 RMISTKELQAHAAADDLWISISGDVYD 216 +M S E++ H++ D WI + G VYD Sbjct: 514 KMFSVSEVKKHSSPDSAWIIVHGHVYD 540
>NIA2_ARATH (P11035) Nitrate reductase [NADH] 2 (EC 1.7.1.1) (NR2)| Length = 917 Score = 30.4 bits (67), Expect = 1.3 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +1 Query: 136 RMISTKELQAHAAADDLWISISGDVYD 216 +M S E++ H +AD WI + G +YD Sbjct: 543 KMYSMSEVKKHNSADSCWIIVHGHIYD 569
>NIA1_ARATH (P11832) Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR1)| Length = 917 Score = 30.0 bits (66), Expect = 1.7 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +1 Query: 136 RMISTKELQAHAAADDLWISISGDVYD 216 +M S E++ H AD WI + G +YD Sbjct: 546 KMYSISEVRKHNTADSAWIIVHGHIYD 572
>NIA_BETVE (P27783) Nitrate reductase [NAD(P)H] (EC 1.7.1.2) (NR)| Length = 898 Score = 29.3 bits (64), Expect = 2.9 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = +1 Query: 136 RMISTKELQAHAAADDLWISISGDVYD 216 +M S E++ H +A+ WI + G +YD Sbjct: 529 KMFSMSEVKKHNSAESAWIIVHGHIYD 555
>NIA_BEABA (P43100) Nitrate reductase [NADPH] (EC 1.7.1.3) (NR)| Length = 894 Score = 29.3 bits (64), Expect = 2.9 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = +1 Query: 133 VRMISTKELQAHAAADDLWISISGDVYD 216 VR+IS +EL+AH + W ++G VY+ Sbjct: 535 VRIISLEELKAHEGEMEPWFVVNGHVYN 562
>NIA_LYCES (P17570) Nitrate reductase [NADH] (EC 1.7.1.1) (NR)| Length = 911 Score = 29.3 bits (64), Expect = 2.9 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = +1 Query: 136 RMISTKELQAHAAADDLWISISGDVYD 216 +M S E++ H ++D WI + G +YD Sbjct: 537 KMYSMSEVRKHNSSDSAWIIVHGHIYD 563
>NIA_SPIOL (P23312) Nitrate reductase [NADH] (EC 1.7.1.1) (NR)| Length = 926 Score = 29.3 bits (64), Expect = 2.9 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +1 Query: 136 RMISTKELQAHAAADDLWISISGDVYD 216 +M S E++ H AD WI + G+VY+ Sbjct: 552 KMYSMSEVKKHNTADSAWIVVHGNVYN 578
>CYB51_ARATH (Q42342) Cytochrome b5 isoform 1| Length = 134 Score = 28.9 bits (63), Expect = 3.8 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +1 Query: 136 RMISTKELQAHAAADDLWISISGDVYD 216 +++S +E+ H D W+ ISG VYD Sbjct: 6 KVLSFEEVSKHNKTKDCWLIISGKVYD 32
>NIA1_BRANA (P39867) Nitrate reductase [NADH], clone PBNBR1405 (EC 1.7.1.1)| (NR) Length = 911 Score = 28.9 bits (63), Expect = 3.8 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = +1 Query: 136 RMISTKELQAHAAADDLWISISGDVYD 216 +M S E++ H +A+ WI + G +YD Sbjct: 540 KMYSMSEVRKHNSAESAWIIVHGHIYD 566
>NIA_LOTJA (P39869) Nitrate reductase [NADH] (EC 1.7.1.1) (NR)| Length = 900 Score = 28.9 bits (63), Expect = 3.8 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +1 Query: 136 RMISTKELQAHAAADDLWISISGDVYD 216 +M S E++ H + D WI + G VYD Sbjct: 522 KMYSLSEVKKHNSPDSAWIIVHGHVYD 548
>CYB2_YEAST (P00175) Cytochrome b2, mitochondrial precursor (EC 1.1.2.3)| (L-lactate dehydrogenase [Cytochrome]) (L-lactate ferricytochrome C oxidoreductase) (L-LCR) Length = 591 Score = 28.5 bits (62), Expect = 5.0 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +1 Query: 142 ISTKELQAHAAADDLWISISGDVYD 216 IS E+ H DD W+ I+G VYD Sbjct: 91 ISPAEVAKHNKPDDCWVVINGYVYD 115
>NIA3_MAIZE (P49102) Nitrate reductase [NADH] 3 (EC 1.7.1.1) (NR)| Length = 889 Score = 28.1 bits (61), Expect = 6.5 Identities = 10/27 (37%), Positives = 16/27 (59%) Frame = +1 Query: 136 RMISTKELQAHAAADDLWISISGDVYD 216 + + E++ HA+ D WI + G VYD Sbjct: 521 QQFTMSEVRKHASQDSAWIVVHGHVYD 547
>NIA7_HORVU (P27968) Nitrate reductase [NAD(P)H] (EC 1.7.1.2)| Length = 891 Score = 27.7 bits (60), Expect = 8.5 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +1 Query: 154 ELQAHAAADDLWISISGDVYD 216 E++ HA+ D WI + G VYD Sbjct: 522 EVRRHASKDSAWIVVHGHVYD 542
>YDAA_SCHPO (Q10352) Hypothetical protein C1F12.10c in chromosome I| Length = 147 Score = 27.7 bits (60), Expect = 8.5 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = +1 Query: 142 ISTKELQAHAAADDLWISISGDVYD 216 ++ +EL H +D WI+I G VY+ Sbjct: 74 VTKEELAKHKTKEDCWIAIRGKVYN 98
>CYB5_TOBAC (P49098) Cytochrome b5| Length = 136 Score = 27.7 bits (60), Expect = 8.5 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +1 Query: 136 RMISTKELQAHAAADDLWISISGDVYD 216 ++ + E+ H A D W+ ISG VYD Sbjct: 6 KVFTLAEVSQHNNAKDCWLVISGKVYD 32 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,953,879 Number of Sequences: 219361 Number of extensions: 70672 Number of successful extensions: 308 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 306 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 308 length of database: 80,573,946 effective HSP length: 47 effective length of database: 70,263,979 effective search space used: 1686335496 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
