ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast11b02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF366565.1| Triticum aestivum aquaporin PIP2 (Pip2) mRNA, com... 151 1e-33
2dbj|AB206102.1| Mimosa pudica pip2;4 mRNA for plasma membrane in... 72 7e-10
3ref|XM_470514.1| Oryza sativa (japonica cultivar-group), mRNA 68 1e-08
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 68 1e-08
5gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genom... 68 1e-08
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 68 1e-08
7dbj|AK109024.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
8dbj|AP004484.1| Lotus japonicus genomic DNA, chromosome 1, clone... 66 5e-08
9gb|AF326501.1|AF326501 Zea mays tonoplast membrane integral prot... 54 2e-04
10gb|AY105015.1| Zea mays PCO137646 mRNA sequence 54 2e-04
11ref|XM_467137.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.011
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.011
13gb|AF326502.1|AF326502 Zea mays tonoplast membrane integral prot... 48 0.011
14dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.011
15dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.011
16dbj|AB114830.1| Oryza sativa (japonica cultivar-group) OsTIP2 mR... 48 0.011
17emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chro... 48 0.011
18gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic prote... 44 0.17
19gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genom... 42 0.67
20ref|XM_538316.2| PREDICTED: Canis familiaris similar to pannexin... 42 0.67
21dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.67
22dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.67
23dbj|AK109439.2| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.67
24dbj|AK119719.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.67
25dbj|AK104786.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.67
26dbj|AK067792.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.67
27dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.67
28ref|NM_202633.1| Arabidopsis thaliana Ran GTPase binding AT3G261... 40 2.6
29ref|NM_113515.2| Arabidopsis thaliana Ran GTPase binding AT3G261... 40 2.6
30ref|XM_550290.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.6
31gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence 40 2.6
32gb|AC159446.1| Trypanosoma brucei chromosome 3 clone RPCI93-3K10... 40 2.6
33ref|XM_819629.1| Trypanosoma brucei TREU927 clone RPCI93-3K10 hy... 40 2.6
34gb|AY059105.1| Arabidopsis thaliana unknown protein (At3g26100) ... 40 2.6
35gb|AY035031.1| Arabidopsis thaliana unknown protein (At3g26100) ... 40 2.6
36dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 2.6
37gb|AF141898.1|AF141898 Vitis berlandieri x Vitis rupestris putat... 40 2.6
38dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.6
39dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 2.6
40gb|AF188843.1|AF188843 Vitis vinifera cultivar Pinot Noir plasma... 40 2.6
41dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.6
42dbj|AB023041.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 2.6
43emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 2.6
44gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 2.6
45gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 2.6
46gb|AC172878.1| Brassica rapa subsp. pekinensis clone KBrH069E01,... 40 2.6 
>gb|AF366565.1| Triticum aestivum aquaporin PIP2 (Pip2) mRNA, complete cds
          Length = 1071

 Score =  151 bits (76), Expect = 1e-33
 Identities = 115/128 (89%)
 Strand = Plus / Plus

                                                                       
Query: 81  ccaaggactatctggaccctcctccgacgccgctgctggacgccggcgagctaggcaagt 140
           |||||||||| || |||||||||||| |||||||| ||||||||||||| || || ||||
Sbjct: 66  ccaaggactacctcgaccctcctccggcgccgctggtggacgccggcgacctgggtaagt 125

                                                                       
Query: 141 ggtctttgtaccgggccaccattgccgagttcaccgccaccctcctcttcgtctacgtcg 200
           ||||||||||||| |||  ||| ||||||||||||||||| || ||||||||||||||||
Sbjct: 126 ggtctttgtaccgtgccgtcatcgccgagttcaccgccacgctgctcttcgtctacgtcg 185

                   
Query: 201 ccgtggcc 208
           ||||||||
Sbjct: 186 ccgtggcc 193
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>dbj|AB206102.1| Mimosa pudica pip2;4 mRNA for plasma membrane intrinsic protein
           2;4, complete cds
          Length = 1263

 Score = 71.9 bits (36), Expect = 7e-10
 Identities = 69/80 (86%)
 Strand = Plus / Plus

                                                                       
Query: 117 tggacgccggcgagctaggcaagtggtctttgtaccgggccaccattgccgagttcaccg 176
           ||||||||| |||||| ||||||||||| || ||| | |||  |||||||||||||  ||
Sbjct: 126 tggacgccgccgagctcggcaagtggtccttctacagagccgtcattgccgagttcgtcg 185

                               
Query: 177 ccaccctcctcttcgtctac 196
           |||||||||||||| |||||
Sbjct: 186 ccaccctcctcttcctctac 205
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>ref|XM_470514.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 843

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 83  aaggactatctggaccctcctccgacgccgctgctggacgccggcgagctaggcaagtgg 142
           |||||||| | ||| ||||||||  |||||||  ||||| ||||||||||||| ||||||
Sbjct: 34  aaggactaccaggatcctcctcccgcgccgctagtggacaccggcgagctaggtaagtgg 93

                                                 
Query: 143 tctttgtaccgggccaccattgccgagttcaccgccac 180
           ||  |||| || ||| ||||||| |||||||| |||||
Sbjct: 94  tcactgtatcgcgccgccattgcggagttcacagccac 131
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                            
Query: 83       aaggactatctggaccctcctccgacgccgctgctggacgccggcgagctaggcaagtgg 142
                |||||||| | ||| ||||||||  |||||||  ||||| ||||||||||||| ||||||
Sbjct: 36056878 aaggactaccaggatcctcctcccgcgccgctagtggacaccggcgagctaggtaagtgg 36056937

                                                      
Query: 143      tctttgtaccgggccaccattgccgagttcaccgccac 180
                ||  |||| || ||| ||||||| |||||||| |||||
Sbjct: 36056938 tcactgtatcgcgccgccattgcggagttcacagccac 36056975



 Score = 42.1 bits (21), Expect = 0.67
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 108      cgccgctgctggacgccggcg 128
                |||||||||||||||||||||
Sbjct: 27367948 cgccgctgctggacgccggcg 27367968
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>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete
              sequence
          Length = 164179

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                          
Query: 83     aaggactatctggaccctcctccgacgccgctgctggacgccggcgagctaggcaagtgg 142
              |||||||| | ||| ||||||||  |||||||  ||||| ||||||||||||| ||||||
Sbjct: 118389 aaggactaccaggatcctcctcccgcgccgctagtggacaccggcgagctaggtaagtgg 118448

                                                    
Query: 143    tctttgtaccgggccaccattgccgagttcaccgccac 180
              ||  |||| || ||| ||||||| |||||||| |||||
Sbjct: 118449 tcactgtatcgcgccgccattgcggagttcacagccac 118486
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                            
Query: 83       aaggactatctggaccctcctccgacgccgctgctggacgccggcgagctaggcaagtgg 142
                |||||||| | ||| ||||||||  |||||||  ||||| ||||||||||||| ||||||
Sbjct: 36146952 aaggactaccaggatcctcctcccgcgccgctagtggacaccggcgagctaggtaagtgg 36147011

                                                      
Query: 143      tctttgtaccgggccaccattgccgagttcaccgccac 180
                ||  |||| || ||| ||||||| |||||||| |||||
Sbjct: 36147012 tcactgtatcgcgccgccattgcggagttcacagccac 36147049



 Score = 42.1 bits (21), Expect = 0.67
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 108      cgccgctgctggacgccggcg 128
                |||||||||||||||||||||
Sbjct: 27459271 cgccgctgctggacgccggcg 27459291
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>dbj|AK109024.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-B04, full
           insert sequence
          Length = 1099

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 83  aaggactatctggaccctcctccgacgccgctgctggacgccggcgagctaggcaagtgg 142
           |||||||| | ||| ||||||||  |||||||  ||||| ||||||||||||| ||||||
Sbjct: 122 aaggactaccaggatcctcctcccgcgccgctagtggacaccggcgagctaggtaagtgg 181

                                                 
Query: 143 tctttgtaccgggccaccattgccgagttcaccgccac 180
           ||  |||| || ||| ||||||| |||||||| |||||
Sbjct: 182 tcactgtatcgcgccgccattgcggagttcacagccac 219
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>dbj|AP004484.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06I17, TM0017,
             complete sequence
          Length = 121127

 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                          
Query: 160   cattgccgagttcaccgccaccctcctcttcgtctacgtcgccgt 204
             |||||||||||||| |||||||||||||||| |||||||| ||||
Sbjct: 34525 cattgccgagttcatcgccaccctcctcttcctctacgtcaccgt 34569
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>gb|AF326501.1|AF326501 Zea mays tonoplast membrane integral protein ZmTIP2-1 mRNA,
           complete cds
          Length = 1110

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 164 gccgagttcaccgccaccctcctcttcgtct 194
           |||||||||| ||||||||||||||||||||
Sbjct: 294 gccgagttcatcgccaccctcctcttcgtct 324
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>gb|AY105015.1| Zea mays PCO137646 mRNA sequence
          Length = 1238

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 164 gccgagttcaccgccaccctcctcttcgtct 194
           |||||||||| ||||||||||||||||||||
Sbjct: 293 gccgagttcatcgccaccctcctcttcgtct 323
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>ref|XM_467137.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 747

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 167 gagttcaccgccaccctcctcttcgtct 194
           ||||||| ||||||||||||||||||||
Sbjct: 70  gagttcatcgccaccctcctcttcgtct 97
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 167      gagttcaccgccaccctcctcttcgtct 194
                ||||||| ||||||||||||||||||||
Sbjct: 26627994 gagttcatcgccaccctcctcttcgtct 26627967
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>gb|AF326502.1|AF326502 Zea mays tonoplast membrane integral protein ZmTIP2-2 mRNA,
           complete cds
          Length = 1073

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 167 gagttcaccgccaccctcctcttcgtct 194
           ||||||| ||||||||||||||||||||
Sbjct: 137 gagttcatcgccaccctcctcttcgtct 164
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>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0519E06
          Length = 170634

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 167    gagttcaccgccaccctcctcttcgtct 194
              ||||||| ||||||||||||||||||||
Sbjct: 170375 gagttcatcgccaccctcctcttcgtct 170348
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>dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1112_F09
          Length = 139371

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 167   gagttcaccgccaccctcctcttcgtct 194
             ||||||| ||||||||||||||||||||
Sbjct: 62155 gagttcatcgccaccctcctcttcgtct 62128
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>dbj|AB114830.1| Oryza sativa (japonica cultivar-group) OsTIP2 mRNA for tonoplast
           intrinsic protein, complete cds
          Length = 1013

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 167 gagttcaccgccaccctcctcttcgtct 194
           ||||||| ||||||||||||||||||||
Sbjct: 143 gagttcatcgccaccctcctcttcgtct 170
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>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
          Length = 339972

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 167    gagttcaccgccaccctcctcttcgtct 194
              ||||||| ||||||||||||||||||||
Sbjct: 332808 gagttcatcgccaccctcctcttcgtct 332781



 Score = 48.1 bits (24), Expect = 0.011
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 167    gagttcaccgccaccctcctcttcgtct 194
              ||||||| ||||||||||||||||||||
Sbjct: 249840 gagttcatcgccaccctcctcttcgtct 249867
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>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast
             intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes,
             complete cds
          Length = 65979

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 167   gagttcaccgccaccctcctcttcgt 192
             ||||||| ||||||||||||||||||
Sbjct: 44089 gagttcatcgccaccctcctcttcgt 44114
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>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete
             sequence
          Length = 138345

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 108   cgccgctgctggacgccggcg 128
             |||||||||||||||||||||
Sbjct: 68155 cgccgctgctggacgccggcg 68175
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>ref|XM_538316.2| PREDICTED: Canis familiaris similar to pannexin 2 (LOC481195), mRNA
          Length = 1749

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 108  cgccgctgctggacgccggcg 128
            |||||||||||||||||||||
Sbjct: 1256 cgccgctgctggacgccggcg 1276
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 84/105 (80%)
 Strand = Plus / Plus

                                                                            
Query: 94       ggaccctcctccgacgccgctgctggacgccggcgagctaggcaagtggtctttgtaccg 153
                |||||| || ||| |||||||||||||| |  ||||||| || ||||||||  |||||||
Sbjct: 21008844 ggacccgccgccggcgccgctgctggacacgagcgagctgggtaagtggtcgctgtaccg 21008903

                                                             
Query: 154      ggccaccattgccgagttcaccgccaccctcctcttcgtctacgt 198
                 |||  ||| || |||||||  || || ||| ||||| |||||||
Sbjct: 21008904 tgccctcatcgcggagttcatggcgacgctcatcttcctctacgt 21008948
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>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1274F11
          Length = 171257

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 84/105 (80%)
 Strand = Plus / Plus

                                                                          
Query: 94     ggaccctcctccgacgccgctgctggacgccggcgagctaggcaagtggtctttgtaccg 153
              |||||| || ||| |||||||||||||| |  ||||||| || ||||||||  |||||||
Sbjct: 100933 ggacccgccgccggcgccgctgctggacacgagcgagctgggtaagtggtcgctgtaccg 100992

                                                           
Query: 154    ggccaccattgccgagttcaccgccaccctcctcttcgtctacgt 198
               |||  ||| || |||||||  || || ||| ||||| |||||||
Sbjct: 100993 tgccctcatcgcggagttcatggcgacgctcatcttcctctacgt 101037
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>dbj|AK109439.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H08, full
           insert sequence
          Length = 1247

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 84/105 (80%)
 Strand = Plus / Plus

                                                                       
Query: 94  ggaccctcctccgacgccgctgctggacgccggcgagctaggcaagtggtctttgtaccg 153
           |||||| || ||| |||||||||||||| |  ||||||| || ||||||||  |||||||
Sbjct: 106 ggacccgccgccggcgccgctgctggacacgagcgagctgggtaagtggtcgctgtaccg 165

                                                        
Query: 154 ggccaccattgccgagttcaccgccaccctcctcttcgtctacgt 198
            |||  ||| || |||||||  || || ||| ||||| |||||||
Sbjct: 166 tgccctcatcgcggagttcatggcgacgctcatcttcctctacgt 210
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>dbj|AK119719.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-G06, full
           insert sequence
          Length = 1066

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 84/105 (80%)
 Strand = Plus / Plus

                                                                       
Query: 94  ggaccctcctccgacgccgctgctggacgccggcgagctaggcaagtggtctttgtaccg 153
           |||||| || ||| |||||||||||||| |  ||||||| || ||||||||  |||||||
Sbjct: 103 ggacccgccgccggcgccgctgctggacacgagcgagctgggtaagtggtcgctgtaccg 162

                                                        
Query: 154 ggccaccattgccgagttcaccgccaccctcctcttcgtctacgt 198
            |||  ||| || |||||||  || || ||| ||||| |||||||
Sbjct: 163 tgccctcatcgcggagttcatggcgacgctcatcttcctctacgt 207
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>dbj|AK104786.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-D11, full
           insert sequence
          Length = 1249

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 84/105 (80%)
 Strand = Plus / Plus

                                                                       
Query: 94  ggaccctcctccgacgccgctgctggacgccggcgagctaggcaagtggtctttgtaccg 153
           |||||| || ||| |||||||||||||| |  ||||||| || ||||||||  |||||||
Sbjct: 104 ggacccgccgccggcgccgctgctggacacgagcgagctgggtaagtggtcgctgtaccg 163

                                                        
Query: 154 ggccaccattgccgagttcaccgccaccctcctcttcgtctacgt 198
            |||  ||| || |||||||  || || ||| ||||| |||||||
Sbjct: 164 tgccctcatcgcggagttcatggcgacgctcatcttcctctacgt 208
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>dbj|AK067792.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118N06, full
           insert sequence
          Length = 1302

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 84/105 (80%)
 Strand = Plus / Plus

                                                                       
Query: 94  ggaccctcctccgacgccgctgctggacgccggcgagctaggcaagtggtctttgtaccg 153
           |||||| || ||| |||||||||||||| |  ||||||| || ||||||||  |||||||
Sbjct: 99  ggacccgccgccggcgccgctgctggacacgagcgagctgggtaagtggtcgctgtaccg 158

                                                        
Query: 154 ggccaccattgccgagttcaccgccaccctcctcttcgtctacgt 198
            |||  ||| || |||||||  || || ||| ||||| |||||||
Sbjct: 159 tgccctcatcgcggagttcatggcgacgctcatcttcctctacgt 203
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>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone: P0478E02
          Length = 140715

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 84/105 (80%)
 Strand = Plus / Plus

                                                                         
Query: 94    ggaccctcctccgacgccgctgctggacgccggcgagctaggcaagtggtctttgtaccg 153
             |||||| || ||| |||||||||||||| |  ||||||| || ||||||||  |||||||
Sbjct: 30144 ggacccgccgccggcgccgctgctggacacgagcgagctgggtaagtggtcgctgtaccg 30203

                                                          
Query: 154   ggccaccattgccgagttcaccgccaccctcctcttcgtctacgt 198
              |||  ||| || |||||||  || || ||| ||||| |||||||
Sbjct: 30204 tgccctcatcgcggagttcatggcgacgctcatcttcctctacgt 30248
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>ref|NM_202633.1| Arabidopsis thaliana Ran GTPase binding AT3G26100 transcript variant
            AT3G26100.2 mRNA, complete cds
          Length = 2271

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   aagctgaatacggagggcaa 54
            ||||||||||||||||||||
Sbjct: 1045 aagctgaatacggagggcaa 1064
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>ref|NM_113515.2| Arabidopsis thaliana Ran GTPase binding AT3G26100 transcript variant
            AT3G26100.1 mRNA, complete cds
          Length = 2391

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   aagctgaatacggagggcaa 54
            ||||||||||||||||||||
Sbjct: 1165 aagctgaatacggagggcaa 1184
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>ref|XM_550290.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 738

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 108 cgccgctgctggacgccggc 127
           ||||||||||||||||||||
Sbjct: 404 cgccgctgctggacgccggc 385
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>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence
          Length = 1653225

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 103    tccgacgccgctgctggacg 122
              ||||||||||||||||||||
Sbjct: 859980 tccgacgccgctgctggacg 859961
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>gb|AC159446.1| Trypanosoma brucei chromosome 3 clone RPCI93-3K10, complete sequence
          Length = 91751

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   tccgacgccgctgctggacg 122
             ||||||||||||||||||||
Sbjct: 66426 tccgacgccgctgctggacg 66407
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>ref|XM_819629.1| Trypanosoma brucei TREU927 clone RPCI93-3K10 hypothetical protein
           (Tb927.3.3350) partial mRNA
          Length = 1752

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 103 tccgacgccgctgctggacg 122
           ||||||||||||||||||||
Sbjct: 469 tccgacgccgctgctggacg 488
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>gb|AY059105.1| Arabidopsis thaliana unknown protein (At3g26100) mRNA, complete cds
          Length = 1330

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  aagctgaatacggagggcaa 54
           ||||||||||||||||||||
Sbjct: 377 aagctgaatacggagggcaa 396
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>gb|AY035031.1| Arabidopsis thaliana unknown protein (At3g26100) mRNA, complete cds
          Length = 2336

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   aagctgaatacggagggcaa 54
            ||||||||||||||||||||
Sbjct: 1165 aagctgaatacggagggcaa 1184
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 116     ctggacgccggcgagctaggcaag 139
               ||||||||||||||||| ||||||
Sbjct: 2006335 ctggacgccggcgagctgggcaag 2006312
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>gb|AF141898.1|AF141898 Vitis berlandieri x Vitis rupestris putative aquaporin PIP1-2
           (PIP1-2) mRNA, complete cds
          Length = 1154

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 161 attgccgagttcaccgccaccctcctcttcgtctac 196
           |||||||||||||  |||||| |||||||| |||||
Sbjct: 225 attgccgagttcatggccaccttcctcttcctctac 260
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 108     cgccgctgctggacgccggc 127
               ||||||||||||||||||||
Sbjct: 3744430 cgccgctgctggacgccggc 3744449
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 174     ccgccaccctcctcttcgtc 193
               ||||||||||||||||||||
Sbjct: 2660346 ccgccaccctcctcttcgtc 2660327
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>gb|AF188843.1|AF188843 Vitis vinifera cultivar Pinot Noir plasma membrane aquaporin
           (PIP1a) mRNA, complete cds
          Length = 1129

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 161 attgccgagttcaccgccaccctcctcttcgtctac 196
           |||||||||||||  |||||| |||||||| |||||
Sbjct: 217 attgccgagttcatggccaccttcctcttcctctac 252
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>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0089K24
          Length = 154137

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 108   cgccgctgctggacgccggc 127
             ||||||||||||||||||||
Sbjct: 17972 cgccgctgctggacgccggc 17991
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>dbj|AB023041.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MPE11
          Length = 83650

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    aagctgaatacggagggcaa 54
             ||||||||||||||||||||
Sbjct: 79847 aagctgaatacggagggcaa 79866
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 115     gctggacgccggcgagctaggcaagtgg 142
               ||||| ||||||||||| ||||||||||
Sbjct: 1411604 gctggccgccggcgagcaaggcaagtgg 1411631
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 116     ctggacgccggcgagctaggcaag 139
               ||||||||||||||||| ||||||
Sbjct: 2026202 ctggacgccggcgagctgggcaag 2026179
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    cgccgctgctggacgccggc 127
              ||||||||||||||||||||
Sbjct: 181174 cgccgctgctggacgccggc 181193
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>gb|AC172878.1| Brassica rapa subsp. pekinensis clone KBrH069E01, complete sequence
          Length = 53923

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    aagctgaatacggagggcaa 54
             ||||||||||||||||||||
Sbjct: 22526 aagctgaatacggagggcaa 22545


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,253,332
Number of Sequences: 3902068
Number of extensions: 1253332
Number of successful extensions: 84289
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83414
Number of HSP's gapped (non-prelim): 875
length of query: 208
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 186
effective length of database: 17,147,199,772
effective search space: 3189379157592
effective search space used: 3189379157592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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