ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast11b01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 204 1e-49
2dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic D... 204 1e-49
3dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic D... 204 1e-49
4dbj|AK064920.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 1e-49
5ref|XM_483357.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.018
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.018
7dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.018
8dbj|AK109201.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.018
9dbj|AK070323.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.018
10emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 46 0.072
11emb|AJ585991.1| Triticum aestivum partial mRNA for cytochrome P4... 46 0.072
12emb|AJ585990.1| Triticum aestivum partial mRNA for cytochrome P4... 46 0.072
13emb|AJ585988.1| Triticum aestivum partial mRNA for cytochrome P4... 46 0.072
14emb|AJ583532.1| Triticum aestivum mRNA for cytochrome P450 (CYP9... 46 0.072
15emb|AJ583531.1| Triticum aestivum mRNA for cytochrome P450 (CYP9... 46 0.072
16emb|AJ583530.1| Triticum aestivum mRNA for cytochrome P450 (CYP9... 46 0.072
17ref|NM_190360.1| Oryza sativa (japonica cultivar-group), predic... 44 0.28
18gb|AC104285.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.28
19emb|BX062478.1|CNS09KDE Single read from an extremity of a full-... 44 0.28
20emb|BX033605.1|CNS08Y3D Single read from an extremity of a full-... 44 0.28
21emb|BX032472.1|CNS08X7W Single read from an extremity of a full-... 44 0.28
22emb|BX026546.1|CNS08SNA Single read from an extremity of a full-... 44 0.28
23tpg|BK005024.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 44 0.28
24gb|CP000249.1| Frankia sp. CcI3, complete genome 44 0.28
25gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 44 0.28
26dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.28
27dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.28
28dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.28
29dbj|AP003302.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.28
30dbj|AK108657.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.28
31dbj|AK107666.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.28
32dbj|AK105841.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.28
33gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 44 0.28
34gb|AY870606.1| Oryza sativa (japonica cultivar-group) WRKY21 mRN... 44 0.28
35ref|NM_111893.2| Arabidopsis thaliana CYP77A6; heme binding / ir... 42 1.1
36gb|AC153907.1| Mus musculus BAC RP23-205F6 (Roswell Park Cancer... 42 1.1
37gb|BT020415.1| Arabidopsis thaliana At3g10570 mRNA, complete cds 42 1.1
38ref|XM_593072.2| PREDICTED: Bos taurus similar to Wiskott-Aldric... 42 1.1
39gb|AC013428.6|ATAC013428 Arabidopsis thaliana chromosome III BAC... 42 1.1
40gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 42 1.1
41gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 42 1.1
42emb|AJ278372.1|REU278372 Ralstonia eutropha norA2 gene and norR2... 42 1.1
43dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 42 1.1
44gb|AE005675.1| Caulobacter crescentus CB15 section 1 of 359 of t... 42 1.1
45gb|AE012074.1| Xanthomonas axonopodis pv. citri str. 306, secti... 42 1.1
46gb|AE011784.1| Xanthomonas axonopodis pv. citri str. 306, secti... 42 1.1
47gb|AE012248.1| Xanthomonas campestris pv. campestris str. ATCC 3... 42 1.1
48dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 1.1
49emb|AJ585987.1| Triticum aestivum CYP98 pseudogene 42 1.1
50gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 42 1.1
51gb|AF302775.2|AF302775 Xanthomonas campestris pv. campestris Hrc... 42 1.1
52gb|M55224.1|CCRDNAK Caulobacter crescentus heat shock protein (d... 42 1.1
53gb|AC011560.6|AC011560 Arabidopsis thaliana chromosome 3 BAC F13... 42 1.1
54gb|BT004064.1| Arabidopsis thaliana clone RAFL15-08-D08 (R20511)... 42 1.1
55gb|BT021100.1| Arabidopsis thaliana At3g10570 gene, complete cds 42 1.1
56gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 42 1.1
57gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 42 1.1
58gb|AC129583.15| Mus musculus chromosome 15, clone RP23-197P10, c... 40 4.4
59ref|XM_463617.1| Oryza sativa (japonica cultivar-group), predic... 40 4.4
60ref|XM_468697.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.4
61gb|AY307177.1| Lampetra richardsoni preprogonadotropin-releasing... 40 4.4
62gb|AY307176.1| Lampetra appendix preprogonadotropin-releasing ho... 40 4.4
63gb|AY307175.1| Ichthyomyzon unicuspis preprogonadotropin-releasi... 40 4.4
64gb|AY307174.1| Ichthyomyzon fossor preprogonadotropin-releasing ... 40 4.4
65gb|AY052628.1| Petromyzon marinus gonadotropin-releasing hormone... 40 4.4
66gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 4.4
67gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 4.4
68gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genom... 40 4.4
69gb|DQ168848.1| Pseudomonas cichorii strain 83-1 pathogenicity is... 40 4.4
70gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 4.4
71dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl... 40 4.4
72gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 4.4
73gb|DQ059321.1| Zea mays RFLP core bin marker probe p-php20075 (C... 40 4.4
74dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
75dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
76dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
77dbj|AP004586.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
78dbj|AK100437.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
79dbj|AK071325.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
80dbj|AK069331.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
81gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 4.4
82gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 4.4
83gb|U73621.1|BTU73621 Bos taurus paired box protein (pax-6) gene,... 40 4.4
84gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.4
85emb|AL772414.3|CNS08C9S Oryza sativa chromosome 12, . BAC OSJNBa... 40 4.4 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  204 bits (103), Expect = 1e-49
 Identities = 160/179 (89%)
 Strand = Plus / Plus

                                                                            
Query: 155      aacgacgtgctgctgctggcgtcggcggtggtgctggggctgatgtggtggcggcggtgc 214
                ||||||||||||||| ||| |||||||| |||||||| |  |||||||||||||||||| 
Sbjct: 27971573 aacgacgtgctgctggtggtgtcggcggcggtgctggcggcgatgtggtggcggcggtgt 27971632

                                                                            
Query: 215      tccaagacgggcggcgtggacggcctccctccgggcccgcccgggtggccggtggtgggc 274
                |||| ||| |||||||  ||||||||||| ||||| ||||| |||||||||||||| |||
Sbjct: 27971633 tccaggaccggcggcgccgacggcctcccgccggggccgccggggtggccggtggtcggc 27971692

                                                                           
Query: 275      aacctcttccaggtgatcctccagcgccgccccttcatgtacgtcgtgcgcgacctccg 333
                ||||| |||||||||||||||||||| || |||||||||||||| ||||||||||||||
Sbjct: 27971693 aacctgttccaggtgatcctccagcggcggcccttcatgtacgtggtgcgcgacctccg 27971751
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>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0547F09
          Length = 140615

 Score =  204 bits (103), Expect = 1e-49
 Identities = 160/179 (89%)
 Strand = Plus / Plus

                                                                         
Query: 155   aacgacgtgctgctgctggcgtcggcggtggtgctggggctgatgtggtggcggcggtgc 214
             ||||||||||||||| ||| |||||||| |||||||| |  |||||||||||||||||| 
Sbjct: 16392 aacgacgtgctgctggtggtgtcggcggcggtgctggcggcgatgtggtggcggcggtgt 16451

                                                                         
Query: 215   tccaagacgggcggcgtggacggcctccctccgggcccgcccgggtggccggtggtgggc 274
             |||| ||| |||||||  ||||||||||| ||||| ||||| |||||||||||||| |||
Sbjct: 16452 tccaggaccggcggcgccgacggcctcccgccggggccgccggggtggccggtggtcggc 16511

                                                                        
Query: 275   aacctcttccaggtgatcctccagcgccgccccttcatgtacgtcgtgcgcgacctccg 333
             ||||| |||||||||||||||||||| || |||||||||||||| ||||||||||||||
Sbjct: 16512 aacctgttccaggtgatcctccagcggcggcccttcatgtacgtggtgcgcgacctccg 16570
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>dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0003H08
          Length = 142068

 Score =  204 bits (103), Expect = 1e-49
 Identities = 160/179 (89%)
 Strand = Plus / Plus

                                                                          
Query: 155    aacgacgtgctgctgctggcgtcggcggtggtgctggggctgatgtggtggcggcggtgc 214
              ||||||||||||||| ||| |||||||| |||||||| |  |||||||||||||||||| 
Sbjct: 125496 aacgacgtgctgctggtggtgtcggcggcggtgctggcggcgatgtggtggcggcggtgt 125555

                                                                          
Query: 215    tccaagacgggcggcgtggacggcctccctccgggcccgcccgggtggccggtggtgggc 274
              |||| ||| |||||||  ||||||||||| ||||| ||||| |||||||||||||| |||
Sbjct: 125556 tccaggaccggcggcgccgacggcctcccgccggggccgccggggtggccggtggtcggc 125615

                                                                         
Query: 275    aacctcttccaggtgatcctccagcgccgccccttcatgtacgtcgtgcgcgacctccg 333
              ||||| |||||||||||||||||||| || |||||||||||||| ||||||||||||||
Sbjct: 125616 aacctgttccaggtgatcctccagcggcggcccttcatgtacgtggtgcgcgacctccg 125674
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>dbj|AK064920.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000N03, full
           insert sequence
          Length = 1943

 Score =  204 bits (103), Expect = 1e-49
 Identities = 160/179 (89%)
 Strand = Plus / Plus

                                                                       
Query: 155 aacgacgtgctgctgctggcgtcggcggtggtgctggggctgatgtggtggcggcggtgc 214
           ||||||||||||||| ||| |||||||| |||||||| |  |||||||||||||||||| 
Sbjct: 101 aacgacgtgctgctggtggtgtcggcggcggtgctggcggcgatgtggtggcggcggtgt 160

                                                                       
Query: 215 tccaagacgggcggcgtggacggcctccctccgggcccgcccgggtggccggtggtgggc 274
           |||| ||| |||||||  ||||||||||| ||||| ||||| |||||||||||||| |||
Sbjct: 161 tccaggaccggcggcgccgacggcctcccgccggggccgccggggtggccggtggtcggc 220

                                                                      
Query: 275 aacctcttccaggtgatcctccagcgccgccccttcatgtacgtcgtgcgcgacctccg 333
           ||||| |||||||||||||||||||| || |||||||||||||| ||||||||||||||
Sbjct: 221 aacctgttccaggtgatcctccagcggcggcccttcatgtacgtggtgcgcgacctccg 279
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>ref|XM_483357.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1922

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 164 ctgctgctggcgtcggcggtggtgctgg 191
           |||||||||||| |||||||||||||||
Sbjct: 211 ctgctgctggcggcggcggtggtgctgg 238
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 164      ctgctgctggcgtcggcggtggtgctgg 191
                |||||||||||| |||||||||||||||
Sbjct: 25796593 ctgctgctggcggcggcggtggtgctgg 25796566



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 252      cgcccgggtggccggtggtg 271
                ||||||||||||||||||||
Sbjct: 22479870 cgcccgggtggccggtggtg 22479851
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>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0689E12
          Length = 147516

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 164   ctgctgctggcgtcggcggtggtgctgg 191
             |||||||||||| |||||||||||||||
Sbjct: 68804 ctgctgctggcggcggcggtggtgctgg 68777
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>dbj|AK109201.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-C03, full
           insert sequence
          Length = 898

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 164 ctgctgctggcgtcggcggtggtgctgg 191
           |||||||||||| |||||||||||||||
Sbjct: 399 ctgctgctggcggcggcggtggtgctgg 372
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>dbj|AK070323.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052N10, full
           insert sequence
          Length = 1922

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 164 ctgctgctggcgtcggcggtggtgctgg 191
           |||||||||||| |||||||||||||||
Sbjct: 210 ctgctgctggcggcggcggtggtgctgg 237
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 157     cgacgtgctgctgctggcgtcgg 179
               |||||||||||||||||||||||
Sbjct: 2381349 cgacgtgctgctgctggcgtcgg 2381327



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 166     gctgctggcgtcggcggtggtgctg 190
               |||||||||||||||||||| ||||
Sbjct: 4968959 gctgctggcgtcggcggtggcgctg 4968935



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 149     gacgtcaacgacgtgctgctgctgg 173
               |||||||| ||||||||||||||||
Sbjct: 1763882 gacgtcaaggacgtgctgctgctgg 1763906
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>emb|AJ585991.1| Triticum aestivum partial mRNA for cytochrome P450-like protein
          Length = 1532

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 237 gcctccctccgggcccgcccgggtggccggtggtgggcaacct 279
           ||||||| |||||||||  |  |||||||||||||||||||||
Sbjct: 83  gcctcccaccgggcccgtgcccgtggccggtggtgggcaacct 125
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>emb|AJ585990.1| Triticum aestivum partial mRNA for cytochrome P450-like protein
          Length = 1532

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 237 gcctccctccgggcccgcccgggtggccggtggtgggcaacct 279
           ||||||| |||||||||  |  |||||||||||||||||||||
Sbjct: 83  gcctcccaccgggcccgtgcccgtggccggtggtgggcaacct 125
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>emb|AJ585988.1| Triticum aestivum partial mRNA for cytochrome P450-like protein
          Length = 1532

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 237 gcctccctccgggcccgcccgggtggccggtggtgggcaacct 279
           ||||||| |||||||||  |  |||||||||||||||||||||
Sbjct: 83  gcctcccaccgggcccgtgcccgtggccggtggtgggcaacct 125
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>emb|AJ583532.1| Triticum aestivum mRNA for cytochrome P450 (CYP98A12 gene)
          Length = 1774

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 259 gtggccggtggtgggcaacctcttcca 285
           |||||||||| ||||||||||||||||
Sbjct: 177 gtggccggtgctgggcaacctcttcca 203
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>emb|AJ583531.1| Triticum aestivum mRNA for cytochrome P450 (CYP98A11 gene)
          Length = 1852

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 245 ccgggcccgcccgggtggccggtggtgggcaacct 279
           |||||||||| |  |||||||||||||||||||||
Sbjct: 150 ccgggcccgcgcccgtggccggtggtgggcaacct 184
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>emb|AJ583530.1| Triticum aestivum mRNA for cytochrome P450 (CYP98A10 gene)
          Length = 1818

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 245 ccgggcccgcccgggtggccggtggtgggcaacct 279
           |||||||||| |  |||||||||||||||||||||
Sbjct: 148 ccgggcccgcgcccgtggccggtggtgggcaacct 182
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>ref|NM_190360.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 843

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 174 cgtcggcggtggtgctggggctgatg 199
           |||||||||||||||||| |||||||
Sbjct: 20  cgtcggcggtggtgctggagctgatg 45
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>gb|AC104285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0035J08, complete sequence
          Length = 117555

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 163   gctgctgctggcgtcggcggtggtgc 188
             ||||||||||||| ||||||||||||
Sbjct: 84408 gctgctgctggcggcggcggtggtgc 84433
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>emb|BX062478.1|CNS09KDE Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC43DB08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 931

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 162 tgctgctgctggcgtcggcggtggtgctgg 191
           ||||||||| |||| |||||||||||||||
Sbjct: 254 tgctgctgccggcgccggcggtggtgctgg 225
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>emb|BX033605.1|CNS08Y3D Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA5AF10 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 949

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 162 tgctgctgctggcgtcggcggtggtgctgg 191
           ||||||||| |||| |||||||||||||||
Sbjct: 340 tgctgctgccggcgccggcggtggtgctgg 311
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>emb|BX032472.1|CNS08X7W Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA48BE04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 941

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 162 tgctgctgctggcgtcggcggtggtgctgg 191
           ||||||||| |||| |||||||||||||||
Sbjct: 337 tgctgctgccggcgccggcggtggtgctgg 308
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>emb|BX026546.1|CNS08SNA Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA4DE02 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1117

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 162 tgctgctgctggcgtcggcggtggtgctgg 191
           ||||||||| |||| |||||||||||||||
Sbjct: 358 tgctgctgccggcgccggcggtggtgctgg 329
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>tpg|BK005024.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY
           transcription factor 21 (WRKY21) gene, complete cds
          Length = 1057

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 174 cgtcggcggtggtgctggggctgatg 199
           |||||||||||||||||| |||||||
Sbjct: 20  cgtcggcggtggtgctggagctgatg 45
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 244     tccgggcccgcccgggtggccggtgg 269
               |||||||| |||||||||||||||||
Sbjct: 3908702 tccgggccggcccgggtggccggtgg 3908727
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 153     tcaacgacgtgctgctgctggc 174
               ||||||||||||||||||||||
Sbjct: 1600198 tcaacgacgtgctgctgctggc 1600219
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 163    gctgctgctggcgtcggcggtggtgc 188
              ||||||||||||| ||||||||||||
Sbjct: 308888 gctgctgctggcggcggcggtggtgc 308913
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 174      cgtcggcggtggtgctggggctgatg 199
                |||||||||||||||||| |||||||
Sbjct: 35056077 cgtcggcggtggtgctggagctgatg 35056102



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 169      gctggcgtcggcggtggtgctggggctg 196
                ||||||||||||| ||||||||| ||||
Sbjct: 40091514 gctggcgtcggcgctggtgctggtgctg 40091487
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>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0485B12
          Length = 156047

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 174   cgtcggcggtggtgctggggctgatg 199
             |||||||||||||||||| |||||||
Sbjct: 63227 cgtcggcggtggtgctggagctgatg 63252
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>dbj|AP003302.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0703B11
          Length = 144074

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 174    cgtcggcggtggtgctggggctgatg 199
              |||||||||||||||||| |||||||
Sbjct: 100305 cgtcggcggtggtgctggagctgatg 100330
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>dbj|AK108657.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-E07, full
           insert sequence
          Length = 1521

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 174 cgtcggcggtggtgctggggctgatg 199
           |||||||||||||||||| |||||||
Sbjct: 81  cgtcggcggtggtgctggagctgatg 106
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>dbj|AK107666.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-H03, full
           insert sequence
          Length = 1369

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 163 gctgctgctggcgtcggcggtggtgc 188
           ||||||||||||| ||||||||||||
Sbjct: 823 gctgctgctggcggcggcggtggtgc 848
to top
>dbj|AK105841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F08, full
           insert sequence
          Length = 1972

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 163 gctgctgctggcgtcggcggtggtgc 188
           ||||||||||||| ||||||||||||
Sbjct: 823 gctgctgctggcggcggcggtggtgc 848
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 169     gctggcgtcggcggtggtgctg 190
               ||||||||||||||||||||||
Sbjct: 3476613 gctggcgtcggcggtggtgctg 3476634
to top
>gb|AY870606.1| Oryza sativa (japonica cultivar-group) WRKY21 mRNA, complete cds
          Length = 1032

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 174 cgtcggcggtggtgctggggctgatg 199
           |||||||||||||||||| |||||||
Sbjct: 72  cgtcggcggtggtgctggagctgatg 97
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>ref|NM_111893.2| Arabidopsis thaliana CYP77A6; heme binding / iron ion binding /
           monooxygenase/ oxygen binding AT3G10570 (CYP77A6) mRNA,
           complete cds
          Length = 1736

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 257 gggtggccggtggtgggcaacctcttcca 285
           |||||||||||||| || |||||||||||
Sbjct: 197 gggtggccggtggttggaaacctcttcca 225
to top
>gb|AC153907.1| Mus musculus  BAC RP23-205F6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 196286

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 52    actattttcatgccattcctccacc 76
             |||||||||||||| ||||||||||
Sbjct: 80647 actattttcatgcctttcctccacc 80623
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>gb|BT020415.1| Arabidopsis thaliana At3g10570 mRNA, complete cds
          Length = 1542

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 257 gggtggccggtggtgggcaacctcttcca 285
           |||||||||||||| || |||||||||||
Sbjct: 145 gggtggccggtggttggaaacctcttcca 173
to top
>ref|XM_593072.2| PREDICTED: Bos taurus similar to Wiskott-Aldrich syndrome protein
           interacting protein (WASP interacting protein) (PRPL-2
           protein) (LOC540304), mRNA
          Length = 3297

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 163 gctgctgctggcgtcggcggtggtg 187
           ||||||||||||| |||||||||||
Sbjct: 193 gctgctgctggcggcggcggtggtg 217
to top
>gb|AC013428.6|ATAC013428 Arabidopsis thaliana chromosome III BAC F18K10 genomic sequence,
             complete sequence
          Length = 93985

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 257   gggtggccggtggtgggcaacctcttcca 285
             |||||||||||||| || |||||||||||
Sbjct: 59460 gggtggccggtggttggaaacctcttcca 59488
to top
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 163     gctgctgctggcgtcggcggtggtg 187
               ||||||||||| |||||||||||||
Sbjct: 1733444 gctgctgctggtgtcggcggtggtg 1733420
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 154     caacgacgtgctgctgctggc 174
               |||||||||||||||||||||
Sbjct: 1797350 caacgacgtgctgctgctggc 1797370
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>emb|AJ278372.1|REU278372 Ralstonia eutropha norA2 gene and norR2 gene for nitric oxide
            reductase regulator (NorR2)
          Length = 2713

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 154  caacgacgtgctgctgctggc 174
            |||||||||||||||||||||
Sbjct: 2000 caacgacgtgctgctgctggc 2020
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 157     cgacgtgctgctgctggcgtc 177
               |||||||||||||||||||||
Sbjct: 3332301 cgacgtgctgctgctggcgtc 3332321



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 149     gacgtcaacgacgtgctgctgctgg 173
               |||||||| ||||||||||||||||
Sbjct: 2111380 gacgtcaaggacgtgctgctgctgg 2111404
to top
>gb|AE005675.1| Caulobacter crescentus CB15 section 1 of 359 of the complete genome
          Length = 10171

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 149  gacgtcaacgacgtgctgctgctgg 173
            |||||||| ||||||||||||||||
Sbjct: 9302 gacgtcaaggacgtgctgctgctgg 9326
to top
>gb|AE012074.1| Xanthomonas axonopodis pv. citri str. 306,  section 452 of 469 of
           the complete genome
          Length = 10224

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 166 gctgctggcgtcggcggtggtgctg 190
           |||||||||||||||||||| ||||
Sbjct: 545 gctgctggcgtcggcggtggcgctg 521
to top
>gb|AE011784.1| Xanthomonas axonopodis pv. citri str. 306,  section 162 of 469 of the
            complete genome
          Length = 13803

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 149  gacgtcaacgacgtgctgctgctgg 173
            |||||||| ||||||||||||||||
Sbjct: 3047 gacgtcaaggacgtgctgctgctgg 3071
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>gb|AE012248.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 156
            of 460 of the complete genome
          Length = 10786

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 149  gacgtcaacgacgtgctgctgctgg 173
            |||||||| ||||||||||||||||
Sbjct: 1257 gacgtcaaggacgtgctgctgctgg 1281
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 176     tcggcggtggtgctggggctgatgt 200
               ||||||| |||||||||||||||||
Sbjct: 4039800 tcggcggcggtgctggggctgatgt 4039776
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>emb|AJ585987.1| Triticum aestivum CYP98 pseudogene
          Length = 1680

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 259 gtggccggtggtgggcaacct 279
           |||||||||||||||||||||
Sbjct: 136 gtggccggtggtgggcaacct 156
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 149     gacgtcaacgacgtgctgctgctgg 173
               |||||||| ||||||||||||||||
Sbjct: 3320312 gacgtcaaggacgtgctgctgctgg 3320288
to top
>gb|AF302775.2|AF302775 Xanthomonas campestris pv. campestris HrcA (hrcA) gene, complete cds;
            GrpE (grpE), DnaK (dnaK), and DnaJ (dnaJ) genes, complete
            cds; and pyridoxine kinase (pdxK) gene, partial cds
          Length = 6401

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 149  gacgtcaacgacgtgctgctgctgg 173
            |||||||| ||||||||||||||||
Sbjct: 3145 gacgtcaaggacgtgctgctgctgg 3169
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>gb|M55224.1|CCRDNAK Caulobacter crescentus heat shock protein (dnaK) gene, complete cds;
            and heat shock protein (dnaJ) gene, partial cds
          Length = 3051

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 149  gacgtcaacgacgtgctgctgctgg 173
            |||||||| ||||||||||||||||
Sbjct: 1561 gacgtcaaggacgtgctgctgctgg 1585
to top
>gb|AC011560.6|AC011560 Arabidopsis thaliana chromosome 3 BAC F13M14 genomic sequence, complete
             sequence
          Length = 118107

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 257   gggtggccggtggtgggcaacctcttcca 285
             |||||||||||||| || |||||||||||
Sbjct: 45057 gggtggccggtggttggaaacctcttcca 45029
to top
>gb|BT004064.1| Arabidopsis thaliana clone RAFL15-08-D08 (R20511) putative
           cytochrome p450 (At3g10570) mRNA, complete cds
          Length = 1734

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 257 gggtggccggtggtgggcaacctcttcca 285
           |||||||||||||| || |||||||||||
Sbjct: 197 gggtggccggtggttggaaacctcttcca 225
to top
>gb|BT021100.1| Arabidopsis thaliana At3g10570 gene, complete cds
          Length = 1603

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 257 gggtggccggtggtgggcaacctcttcca 285
           |||||||||||||| || |||||||||||
Sbjct: 199 gggtggccggtggttggaaacctcttcca 227
to top
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 157     cgacgtgctgctgctggcgtc 177
               |||||||||||||||||||||
Sbjct: 3327307 cgacgtgctgctgctggcgtc 3327327



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 149     gacgtcaacgacgtgctgctgctgg 173
               |||||||| ||||||||||||||||
Sbjct: 2131280 gacgtcaaggacgtgctgctgctgg 2131304
to top
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 149     gacgtcaacgacgtgctgctgctgg 173
               |||||| ||||||||||||||||||
Sbjct: 1640153 gacgtcgacgacgtgctgctgctgg 1640129
to top
>gb|AC129583.15| Mus musculus chromosome 15, clone RP23-197P10, complete sequence
          Length = 206094

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     actattttcatgccattcct 71
              ||||||||||||||||||||
Sbjct: 119403 actattttcatgccattcct 119384
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>ref|XM_463617.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1128

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 169 gctggcgtcggcggtggtgctggggctg 196
           ||||||||||||| ||||||||| ||||
Sbjct: 378 gctggcgtcggcgctggtgctggtgctg 351
to top
>ref|XM_468697.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1248

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 291 tcctccagcgccgccccttc 310
           ||||||||||||||||||||
Sbjct: 938 tcctccagcgccgccccttc 957
to top
>gb|AY307177.1| Lampetra richardsoni preprogonadotropin-releasing hormone III mRNA,
           complete cds
          Length = 710

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 162 tgctgctgctggcgtcggcg 181
           ||||||||||||||||||||
Sbjct: 138 tgctgctgctggcgtcggcg 157
to top
>gb|AY307176.1| Lampetra appendix preprogonadotropin-releasing hormone III mRNA,
           complete cds
          Length = 722

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 162 tgctgctgctggcgtcggcg 181
           ||||||||||||||||||||
Sbjct: 139 tgctgctgctggcgtcggcg 158
to top
>gb|AY307175.1| Ichthyomyzon unicuspis preprogonadotropin-releasing hormone III
           mRNA, complete cds
          Length = 723

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 162 tgctgctgctggcgtcggcg 181
           ||||||||||||||||||||
Sbjct: 142 tgctgctgctggcgtcggcg 161
to top
>gb|AY307174.1| Ichthyomyzon fossor preprogonadotropin-releasing hormone III mRNA,
           complete cds
          Length = 728

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 162 tgctgctgctggcgtcggcg 181
           ||||||||||||||||||||
Sbjct: 136 tgctgctgctggcgtcggcg 155
to top
>gb|AY052628.1| Petromyzon marinus gonadotropin-releasing hormone III precursor,
           mRNA, complete cds
          Length = 718

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 162 tgctgctgctggcgtcggcg 181
           ||||||||||||||||||||
Sbjct: 135 tgctgctgctggcgtcggcg 154
to top
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 173     gcgtcggcggtggtgctggggctg 196
               ||||||||| ||||||||||||||
Sbjct: 2965100 gcgtcggcgctggtgctggggctg 2965123
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 291      tcctccagcgccgccccttc 310
                ||||||||||||||||||||
Sbjct: 17099228 tcctccagcgccgccccttc 17099247
to top
>gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genomic sequence, complete
              sequence
          Length = 157662

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 291    tcctccagcgccgccccttc 310
              ||||||||||||||||||||
Sbjct: 129974 tcctccagcgccgccccttc 129993
to top
>gb|DQ168848.1| Pseudomonas cichorii strain 83-1 pathogenicity island, partial sequence
          Length = 55569

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 199   gtggtggcggcggtgctcca 218
             ||||||||||||||||||||
Sbjct: 41984 gtggtggcggcggtgctcca 41965
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 136     gggcggcgcgatggacgtcaacga 159
               |||||||||| |||||||||||||
Sbjct: 5075461 gggcggcgcgctggacgtcaacga 5075438
to top
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 177    cggcggtggtgctggggctg 196
              ||||||||||||||||||||
Sbjct: 472552 cggcggtggtgctggggctg 472571
to top
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 164    ctgctgctggcgtcggcggtggtg 187
              |||||||||||||||| |||||||
Sbjct: 769231 ctgctgctggcgtcggtggtggtg 769254
to top
>gb|DQ059321.1| Zea mays RFLP core bin marker probe p-php20075 (CBM10.01), complete
           sequence
          Length = 1311

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 ggcggcggtgctccaagacg 223
           ||||||||||||||||||||
Sbjct: 25  ggcggcggtgctccaagacg 44
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 162      tgctgctgctggcgtcggcggtgg 185
                |||||||| |||||||||||||||
Sbjct: 14547892 tgctgctggtggcgtcggcggtgg 14547869
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 291      tcctccagcgccgccccttc 310
                ||||||||||||||||||||
Sbjct: 17092797 tcctccagcgccgccccttc 17092816
to top
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0678F11
          Length = 154292

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 169   gctggcgtcggcggtggtgctggggctg 196
             ||||||||||||| ||||||||| ||||
Sbjct: 34598 gctggcgtcggcgctggtgctggtgctg 34571
to top
>dbj|AP004586.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0493A04
          Length = 149367

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   cgcccgggtggccggtggtg 271
             ||||||||||||||||||||
Sbjct: 74798 cgcccgggtggccggtggtg 74779
to top
>dbj|AK100437.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088P12, full
           insert sequence
          Length = 1375

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 169 gctggcgtcggcggtggtgctggggctg 196
           ||||||||||||| ||||||||| ||||
Sbjct: 775 gctggcgtcggcgctggtgctggtgctg 802
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>dbj|AK071325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089P04, full
           insert sequence
          Length = 1376

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 169 gctggcgtcggcggtggtgctggggctg 196
           ||||||||||||| ||||||||| ||||
Sbjct: 776 gctggcgtcggcgctggtgctggtgctg 803
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>dbj|AK069331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019N01, full
           insert sequence
          Length = 1284

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 162 tgctgctgctggcgtcggcggtgg 185
           |||||||| |||||||||||||||
Sbjct: 940 tgctgctggtggcgtcggcggtgg 963
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 164     ctgctgctggcgtcggcggtggtgctgg 191
               |||||||||||| ||||||||| |||||
Sbjct: 4072118 ctgctgctggcggcggcggtggcgctgg 4072091
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 166     gctgctggcgtcggcggtggtgctgggg 193
               ||||| ||||| ||||||||||||||||
Sbjct: 2415095 gctgccggcgtgggcggtggtgctgggg 2415068
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>gb|U73621.1|BTU73621 Bos taurus paired box protein (pax-6) gene, partial cds
          Length = 1088

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 284 caggtgatcctccagcgccgcccc 307
           ||||||||||||| ||||||||||
Sbjct: 33  caggtgatcctccggcgccgcccc 56
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 162      tgctgctgctggcgtcggcggtgg 185
                |||||||| |||||||||||||||
Sbjct: 14502176 tgctgctggtggcgtcggcggtgg 14502153
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>emb|AL772414.3|CNS08C9S Oryza sativa chromosome 12, . BAC OSJNBa0040E18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 158261

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    tgctgctgctggcgtcggcggtgg 185
              |||||||| |||||||||||||||
Sbjct: 113401 tgctgctggtggcgtcggcggtgg 113424


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,185,543
Number of Sequences: 3902068
Number of extensions: 3185543
Number of successful extensions: 66530
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64266
Number of HSP's gapped (non-prelim): 2264
length of query: 335
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 313
effective length of database: 17,147,199,772
effective search space: 5367073528636
effective search space used: 5367073528636
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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