ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast10g01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ123897.1| Zea mays RFLP probe umc63 (CBM 3.09) genomic sequ... 176 3e-41
2ref|XM_463383.1| Oryza sativa (japonica cultivar-group), predic... 161 2e-36
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 161 2e-36
4dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic D... 161 2e-36
5dbj|AK102671.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 2e-36
6dbj|AK063325.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 2e-36
7ref|NM_192244.1| Oryza sativa (japonica cultivar-group), predic... 149 6e-33
8dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic D... 149 6e-33
9dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic D... 149 6e-33
10dbj|AK103824.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 6e-33
11dbj|AK101659.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 6e-33
12ref|NM_192249.1| Oryza sativa (japonica cultivar-group), predic... 143 4e-31
13gb|AY459338.1| Oryza sativa (japonica cultivar-group) clone CL02... 141 2e-30
14dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.26
15ref|XM_473829.1| Oryza sativa (japonica cultivar-group), predic... 42 1.0
16gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 42 1.0
17gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 42 1.0
18emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4,... 42 1.0
19dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
20dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
21dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
22dbj|AP005613.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
23dbj|AK099648.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.0
24ref|XM_483004.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.1
25ref|XM_474128.1| Oryza sativa (japonica cultivar-group), predic... 40 4.1
26gb|AF527807.1| Sorghum bicolor clone BAC SB_BBc0126P21 php200725... 40 4.1
27gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 4.1
28gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 4.1
29emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete ch... 40 4.1
30emb|Z79690.1|ANPFKA Aspergillus niger pfkA gene 40 4.1
31emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 4.1
32gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 4.1
33gb|CP000249.1| Frankia sp. CcI3, complete genome 40 4.1
34dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
35dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
36dbj|AP004213.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
37dbj|AK119889.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.1
38dbj|AK120146.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.1
39dbj|AK119579.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.1
40dbj|AK107940.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.1
41dbj|AK100096.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.1
42emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 4.1
43emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 4.1
44gb|AF080235.1|AF080235 Streptomyces cyanogenus landomycin biosyn... 40 4.1
45emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4,... 40 4.1
46emb|AL929212.8| Mouse DNA sequence from clone RP23-65G6 on chrom... 40 4.1 
>gb|DQ123897.1| Zea mays RFLP probe umc63 (CBM 3.09) genomic sequence
          Length = 881

 Score =  176 bits (89), Expect = 3e-41
 Identities = 181/211 (85%), Gaps = 3/211 (1%)
 Strand = Plus / Plus

                                                                       
Query: 106 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 165
           ||||||||||||||||||||||||||||||| ||  | || |||||||||||||||||||
Sbjct: 425 agccgctgcacatcctcttcttcccgttcctcgcgccggggcacctcatcccgatcgccg 484

                                                                       
Query: 166 acatggccgcgctcttcgccggccgtggcgtccggtgcaccatcctcaccacgcccgtca 225
           ||||||||||||||||||| | ||| |||||| ||||||||||||||||||| || || |
Sbjct: 485 acatggccgcgctcttcgctgcccgaggcgtcaggtgcaccatcctcaccacaccggtga 544

                                                                       
Query: 226 acgccgccatcatccgctccgcagtccaccgcgccaacgactccttcgccggcacc---g 282
           |||||    |||||||||| || ||  |||||||||||||| ||| |  |||||||   |
Sbjct: 545 acgcccaactcatccgctcggcggtagaccgcgccaacgacgcctcccgcggcaccgagg 604

                                          
Query: 283 gctccccggccatcgacatcgccgtcgtgcc 313
           || ||| ||||||||||||||| ||||||||
Sbjct: 605 gcgccctggccatcgacatcgcggtcgtgcc 635
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>ref|XM_463383.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1485

 Score =  161 bits (81), Expect = 2e-36
 Identities = 141/161 (87%)
 Strand = Plus / Plus

                                                                       
Query: 106 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 165
           |||| ||||||||||||||| |||||||||| |   ||||||||||||||||||||||||
Sbjct: 14  agccactgcacatcctcttcctcccgttcctcgtgcccggccacctcatcccgatcgccg 73

                                                                       
Query: 166 acatggccgcgctcttcgccggccgtggcgtccggtgcaccatcctcaccacgcccgtca 225
           ||||||||||||||||||| |  || |||||| ||||||||||||||||||| |||||||
Sbjct: 74  acatggccgcgctcttcgcggcacgcggcgtcaggtgcaccatcctcaccacccccgtca 133

                                                    
Query: 226 acgccgccatcatccgctccgcagtccaccgcgccaacgac 266
           | |||||| || ||||| | || ||  ||||||||||||||
Sbjct: 134 atgccgccgtcgtccgccctgccgtggaccgcgccaacgac 174



 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 288 ccggccatcgacatcgccgtcgtgcc 313
           ||||| ||||||||||||||||||||
Sbjct: 205 ccggcgatcgacatcgccgtcgtgcc 230
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  161 bits (81), Expect = 2e-36
 Identities = 141/161 (87%)
 Strand = Plus / Plus

                                                                            
Query: 106      agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 165
                |||| ||||||||||||||| |||||||||| |   ||||||||||||||||||||||||
Sbjct: 23452288 agccactgcacatcctcttcctcccgttcctcgtgcccggccacctcatcccgatcgccg 23452347

                                                                            
Query: 166      acatggccgcgctcttcgccggccgtggcgtccggtgcaccatcctcaccacgcccgtca 225
                ||||||||||||||||||| |  || |||||| ||||||||||||||||||| |||||||
Sbjct: 23452348 acatggccgcgctcttcgcggcacgcggcgtcaggtgcaccatcctcaccacccccgtca 23452407

                                                         
Query: 226      acgccgccatcatccgctccgcagtccaccgcgccaacgac 266
                | |||||| || ||||| | || ||  ||||||||||||||
Sbjct: 23452408 atgccgccgtcgtccgccctgccgtggaccgcgccaacgac 23452448



 Score =  151 bits (76), Expect = 2e-33
 Identities = 112/124 (90%)
 Strand = Plus / Plus

                                                                            
Query: 106      agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 165
                |||| ||||||||||||||| |||||||||| |   ||||||||||||||||||||||||
Sbjct: 23459869 agccactgcacatcctcttcctcccgttcctcgtgcccggccacctcatcccgatcgccg 23459928

                                                                            
Query: 166      acatggccgcgctcttcgccggccgtggcgtccggtgcaccatcctcaccacgcccgtca 225
                ||||||||||||||||||| |  || |||||| ||||||||||||||||||| |||||||
Sbjct: 23459929 acatggccgcgctcttcgcggcacgcggcgtcaggtgcaccatcctcaccacccccgtca 23459988

                    
Query: 226      acgc 229
                ||||
Sbjct: 23459989 acgc 23459992



 Score =  149 bits (75), Expect = 6e-33
 Identities = 141/163 (86%)
 Strand = Plus / Plus

                                                                            
Query: 106      agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 165
                |||| |||||||||||||||||||| ||||| ||  |||| || ||||||||||||||||
Sbjct: 25592277 agccactgcacatcctcttcttcccattcctcgcgcccggtcatctcatcccgatcgccg 25592336

                                                                            
Query: 166      acatggccgcgctcttcgccggccgtggcgtccggtgcaccatcctcaccacgcccgtca 225
                | |||||||| || |||||||  ||||||||| ||||||||||||||||||| || ||||
Sbjct: 25592337 atatggccgctctgttcgccgctcgtggcgtcaggtgcaccatcctcaccacccctgtca 25592396

                                                           
Query: 226      acgccgccatcatccgctccgcagtccaccgcgccaacgactc 268
                |||||||| | |||||||| || ||  |||| |||||||||||
Sbjct: 25592397 acgccgccgtgatccgctcggccgtggaccgtgccaacgactc 25592439



 Score =  143 bits (72), Expect = 4e-31
 Identities = 120/136 (88%)
 Strand = Plus / Plus

                                                                            
Query: 106      agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 165
                ||||| ||||||||||||||||||||||  | ||   |||||||||||||||| | ||||
Sbjct: 25609596 agccgttgcacatcctcttcttcccgtttatcgcgcacggccacctcatcccggtggccg 25609655

                                                                            
Query: 166      acatggccgcgctcttcgccggccgtggcgtccggtgcaccatcctcaccacgcccgtca 225
                ||||||||||||| ||||||| ||| ||||| ||||| |||||||||||||| |||||||
Sbjct: 25609656 acatggccgcgcttttcgccgcccgcggcgttcggtgtaccatcctcaccacccccgtca 25609715

                                
Query: 226      acgccgccatcatccg 241
                |||||||| |||||||
Sbjct: 25609716 acgccgccgtcatccg 25609731



 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 288      ccggccatcgacatcgccgtcgtgcc 313
                ||||| ||||||||||||||||||||
Sbjct: 23452479 ccggcgatcgacatcgccgtcgtgcc 23452504



 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 211     tcaccacgcccgtcaacgccgc 232
               ||||||||||||||||||||||
Sbjct: 3915162 tcaccacgcccgtcaacgccgc 3915141



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 294      atcgacatcgccgtcgtgcc 313
                ||||||||||||||||||||
Sbjct: 23460069 atcgacatcgccgtcgtgcc 23460088
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>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0025A05
          Length = 154298

 Score =  161 bits (81), Expect = 2e-36
 Identities = 141/161 (87%)
 Strand = Plus / Plus

                                                                         
Query: 106   agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 165
             |||| ||||||||||||||| |||||||||| |   ||||||||||||||||||||||||
Sbjct: 15593 agccactgcacatcctcttcctcccgttcctcgtgcccggccacctcatcccgatcgccg 15652

                                                                         
Query: 166   acatggccgcgctcttcgccggccgtggcgtccggtgcaccatcctcaccacgcccgtca 225
             ||||||||||||||||||| |  || |||||| ||||||||||||||||||| |||||||
Sbjct: 15653 acatggccgcgctcttcgcggcacgcggcgtcaggtgcaccatcctcaccacccccgtca 15712

                                                      
Query: 226   acgccgccatcatccgctccgcagtccaccgcgccaacgac 266
             | |||||| || ||||| | || ||  ||||||||||||||
Sbjct: 15713 atgccgccgtcgtccgccctgccgtggaccgcgccaacgac 15753



 Score =  151 bits (76), Expect = 2e-33
 Identities = 112/124 (90%)
 Strand = Plus / Plus

                                                                         
Query: 106   agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 165
             |||| ||||||||||||||| |||||||||| |   ||||||||||||||||||||||||
Sbjct: 23174 agccactgcacatcctcttcctcccgttcctcgtgcccggccacctcatcccgatcgccg 23233

                                                                         
Query: 166   acatggccgcgctcttcgccggccgtggcgtccggtgcaccatcctcaccacgcccgtca 225
             ||||||||||||||||||| |  || |||||| ||||||||||||||||||| |||||||
Sbjct: 23234 acatggccgcgctcttcgcggcacgcggcgtcaggtgcaccatcctcaccacccccgtca 23293

                 
Query: 226   acgc 229
             ||||
Sbjct: 23294 acgc 23297



 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 288   ccggccatcgacatcgccgtcgtgcc 313
             ||||| ||||||||||||||||||||
Sbjct: 15784 ccggcgatcgacatcgccgtcgtgcc 15809



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   atcgacatcgccgtcgtgcc 313
             ||||||||||||||||||||
Sbjct: 23374 atcgacatcgccgtcgtgcc 23393
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>dbj|AK102671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033102B03, full
           insert sequence
          Length = 1675

 Score =  161 bits (81), Expect = 2e-36
 Identities = 141/161 (87%)
 Strand = Plus / Plus

                                                                       
Query: 106 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 165
           |||| ||||||||||||||| |||||||||| |   ||||||||||||||||||||||||
Sbjct: 103 agccactgcacatcctcttcctcccgttcctcgtgcccggccacctcatcccgatcgccg 162

                                                                       
Query: 166 acatggccgcgctcttcgccggccgtggcgtccggtgcaccatcctcaccacgcccgtca 225
           ||||||||||||||||||| |  || |||||| ||||||||||||||||||| |||||||
Sbjct: 163 acatggccgcgctcttcgcggcacgcggcgtcaggtgcaccatcctcaccacccccgtca 222

                                                    
Query: 226 acgccgccatcatccgctccgcagtccaccgcgccaacgac 266
           | |||||| || ||||| | || ||  ||||||||||||||
Sbjct: 223 atgccgccgtcgtccgccctgccgtggaccgcgccaacgac 263



 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 288 ccggccatcgacatcgccgtcgtgcc 313
           ||||| ||||||||||||||||||||
Sbjct: 294 ccggcgatcgacatcgccgtcgtgcc 319
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>dbj|AK063325.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-H06, full
           insert sequence
          Length = 1962

 Score =  161 bits (81), Expect = 2e-36
 Identities = 141/161 (87%)
 Strand = Plus / Plus

                                                                       
Query: 106 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 165
           |||| ||||||||||||||| |||||||||| |   ||||||||||||||||||||||||
Sbjct: 104 agccactgcacatcctcttcctcccgttcctcgtgcccggccacctcatcccgatcgccg 163

                                                                       
Query: 166 acatggccgcgctcttcgccggccgtggcgtccggtgcaccatcctcaccacgcccgtca 225
           ||||||||||||||||||| |  || |||||| ||||||||||||||||||| |||||||
Sbjct: 164 acatggccgcgctcttcgcggcacgcggcgtcaggtgcaccatcctcaccacccccgtca 223

                                                    
Query: 226 acgccgccatcatccgctccgcagtccaccgcgccaacgac 266
           | |||||| || ||||| | || ||  ||||||||||||||
Sbjct: 224 atgccgccgtcgtccgccctgccgtggaccgcgccaacgac 264



 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 288 ccggccatcgacatcgccgtcgtgcc 313
           ||||| ||||||||||||||||||||
Sbjct: 295 ccggcgatcgacatcgccgtcgtgcc 320
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>ref|NM_192244.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1476

 Score =  149 bits (75), Expect = 6e-33
 Identities = 141/163 (86%)
 Strand = Plus / Plus

                                                                       
Query: 106 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 165
           |||| |||||||||||||||||||| ||||| ||  |||| || ||||||||||||||||
Sbjct: 23  agccactgcacatcctcttcttcccattcctcgcgcccggtcatctcatcccgatcgccg 82

                                                                       
Query: 166 acatggccgcgctcttcgccggccgtggcgtccggtgcaccatcctcaccacgcccgtca 225
           | |||||||| || |||||||  ||||||||| ||||||||||||||||||| || ||||
Sbjct: 83  atatggccgctctgttcgccgctcgtggcgtcaggtgcaccatcctcaccacccctgtca 142

                                                      
Query: 226 acgccgccatcatccgctccgcagtccaccgcgccaacgactc 268
           |||||||| | |||||||| || ||  |||| |||||||||||
Sbjct: 143 acgccgccgtgatccgctcggccgtggaccgtgccaacgactc 185
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>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0004A09
          Length = 158826

 Score =  149 bits (75), Expect = 6e-33
 Identities = 141/163 (86%)
 Strand = Plus / Plus

                                                                         
Query: 106   agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 165
             |||| |||||||||||||||||||| ||||| ||  |||| || ||||||||||||||||
Sbjct: 39083 agccactgcacatcctcttcttcccattcctcgcgcccggtcatctcatcccgatcgccg 39142

                                                                         
Query: 166   acatggccgcgctcttcgccggccgtggcgtccggtgcaccatcctcaccacgcccgtca 225
             | |||||||| || |||||||  ||||||||| ||||||||||||||||||| || ||||
Sbjct: 39143 atatggccgctctgttcgccgctcgtggcgtcaggtgcaccatcctcaccacccctgtca 39202

                                                        
Query: 226   acgccgccatcatccgctccgcagtccaccgcgccaacgactc 268
             |||||||| | |||||||| || ||  |||| |||||||||||
Sbjct: 39203 acgccgccgtgatccgctcggccgtggaccgtgccaacgactc 39245



 Score =  143 bits (72), Expect = 4e-31
 Identities = 120/136 (88%)
 Strand = Plus / Plus

                                                                         
Query: 106   agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 165
             ||||| ||||||||||||||||||||||  | ||   |||||||||||||||| | ||||
Sbjct: 56402 agccgttgcacatcctcttcttcccgtttatcgcgcacggccacctcatcccggtggccg 56461

                                                                         
Query: 166   acatggccgcgctcttcgccggccgtggcgtccggtgcaccatcctcaccacgcccgtca 225
             ||||||||||||| ||||||| ||| ||||| ||||| |||||||||||||| |||||||
Sbjct: 56462 acatggccgcgcttttcgccgcccgcggcgttcggtgtaccatcctcaccacccccgtca 56521

                             
Query: 226   acgccgccatcatccg 241
             |||||||| |||||||
Sbjct: 56522 acgccgccgtcatccg 56537
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>dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0696E01
          Length = 194056

 Score =  149 bits (75), Expect = 6e-33
 Identities = 141/163 (86%)
 Strand = Plus / Plus

                                                                          
Query: 106    agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 165
              |||| |||||||||||||||||||| ||||| ||  |||| || ||||||||||||||||
Sbjct: 119880 agccactgcacatcctcttcttcccattcctcgcgcccggtcatctcatcccgatcgccg 119939

                                                                          
Query: 166    acatggccgcgctcttcgccggccgtggcgtccggtgcaccatcctcaccacgcccgtca 225
              | |||||||| || |||||||  ||||||||| ||||||||||||||||||| || ||||
Sbjct: 119940 atatggccgctctgttcgccgctcgtggcgtcaggtgcaccatcctcaccacccctgtca 119999

                                                         
Query: 226    acgccgccatcatccgctccgcagtccaccgcgccaacgactc 268
              |||||||| | |||||||| || ||  |||| |||||||||||
Sbjct: 120000 acgccgccgtgatccgctcggccgtggaccgtgccaacgactc 120042



 Score =  143 bits (72), Expect = 4e-31
 Identities = 120/136 (88%)
 Strand = Plus / Plus

                                                                          
Query: 106    agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 165
              ||||| ||||||||||||||||||||||  | ||   |||||||||||||||| | ||||
Sbjct: 137199 agccgttgcacatcctcttcttcccgtttatcgcgcacggccacctcatcccggtggccg 137258

                                                                          
Query: 166    acatggccgcgctcttcgccggccgtggcgtccggtgcaccatcctcaccacgcccgtca 225
              ||||||||||||| ||||||| ||| ||||| ||||| |||||||||||||| |||||||
Sbjct: 137259 acatggccgcgcttttcgccgcccgcggcgttcggtgtaccatcctcaccacccccgtca 137318

                              
Query: 226    acgccgccatcatccg 241
              |||||||| |||||||
Sbjct: 137319 acgccgccgtcatccg 137334
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>dbj|AK103824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147K24, full
           insert sequence
          Length = 1896

 Score =  149 bits (75), Expect = 6e-33
 Identities = 141/163 (86%)
 Strand = Plus / Plus

                                                                       
Query: 106 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 165
           |||| |||||||||||||||||||| ||||| ||  |||| || ||||||||||||||||
Sbjct: 120 agccactgcacatcctcttcttcccattcctcgcgcccggtcatctcatcccgatcgccg 179

                                                                       
Query: 166 acatggccgcgctcttcgccggccgtggcgtccggtgcaccatcctcaccacgcccgtca 225
           | |||||||| || |||||||  ||||||||| ||||||||||||||||||| || ||||
Sbjct: 180 atatggccgctctgttcgccgctcgtggcgtcaggtgcaccatcctcaccacccctgtca 239

                                                      
Query: 226 acgccgccatcatccgctccgcagtccaccgcgccaacgactc 268
           |||||||| | |||||||| || ||  |||| |||||||||||
Sbjct: 240 acgccgccgtgatccgctcggccgtggaccgtgccaacgactc 282
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>dbj|AK101659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057I21, full
           insert sequence
          Length = 1896

 Score =  149 bits (75), Expect = 6e-33
 Identities = 141/163 (86%)
 Strand = Plus / Plus

                                                                       
Query: 106 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 165
           |||| |||||||||||||||||||| ||||| ||  |||| || ||||||||||||||||
Sbjct: 120 agccactgcacatcctcttcttcccattcctcgcgcccggtcatctcatcccgatcgccg 179

                                                                       
Query: 166 acatggccgcgctcttcgccggccgtggcgtccggtgcaccatcctcaccacgcccgtca 225
           | |||||||| || |||||||  ||||||||| ||||||||||||||||||| || ||||
Sbjct: 180 atatggccgctctgttcgccgctcgtggcgtcaggtgcaccatcctcaccacccctgtca 239

                                                      
Query: 226 acgccgccatcatccgctccgcagtccaccgcgccaacgactc 268
           |||||||| | |||||||| || ||  |||| |||||||||||
Sbjct: 240 acgccgccgtgatccgctcggccgtggaccgtgccaacgactc 282
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>ref|NM_192249.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1491

 Score =  143 bits (72), Expect = 4e-31
 Identities = 120/136 (88%)
 Strand = Plus / Plus

                                                                       
Query: 106 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 165
           ||||| ||||||||||||||||||||||  | ||   |||||||||||||||| | ||||
Sbjct: 26  agccgttgcacatcctcttcttcccgtttatcgcgcacggccacctcatcccggtggccg 85

                                                                       
Query: 166 acatggccgcgctcttcgccggccgtggcgtccggtgcaccatcctcaccacgcccgtca 225
           ||||||||||||| ||||||| ||| ||||| ||||| |||||||||||||| |||||||
Sbjct: 86  acatggccgcgcttttcgccgcccgcggcgttcggtgtaccatcctcaccacccccgtca 145

                           
Query: 226 acgccgccatcatccg 241
           |||||||| |||||||
Sbjct: 146 acgccgccgtcatccg 161
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>gb|AY459338.1| Oryza sativa (japonica cultivar-group) clone CL029396.2 R2R3-MYB gene
            region
          Length = 16710

 Score =  141 bits (71), Expect = 2e-30
 Identities = 122/139 (87%)
 Strand = Plus / Minus

                                                                        
Query: 106  agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 165
            |||| |||||||||||||||||||| ||||| ||  |||| || ||||||||||||||||
Sbjct: 6495 agccactgcacatcctcttcttcccattcctcgcgcccggtcatctcatcccgatcgccg 6436

                                                                        
Query: 166  acatggccgcgctcttcgccggccgtggcgtccggtgcaccatcctcaccacgcccgtca 225
            | |||||||| || |||||||  ||||||||| ||||||||||||||||||| || ||||
Sbjct: 6435 atatggccgctctgttcgccgctcgtggcgtcaggtgcaccatcctcaccacccctgtca 6376

                               
Query: 226  acgccgccatcatccgctc 244
            |||||||| | ||||||||
Sbjct: 6375 acgccgccgtgatccgctc 6357
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>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0013F10
          Length = 163095

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 211   tcaccacgcccgtcaacgccgc 232
             ||||||||||||||||||||||
Sbjct: 37066 tcaccacgcccgtcaacgccgc 37045
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>ref|XM_473829.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2778

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 87   gccatggctgtccacgacgagccgc 111
            |||||||||||| ||||||||||||
Sbjct: 2722 gccatggctgtcgacgacgagccgc 2746
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 289     cggccatcgacatcgccgtcg 309
               |||||||||||||||||||||
Sbjct: 1924784 cggccatcgacatcgccgtcg 1924764
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 154    tcccgatcgccgacatggccg 174
              |||||||||||||||||||||
Sbjct: 730331 tcccgatcgccgacatggccg 730311
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>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03,
              complete sequence
          Length = 179798

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 87     gccatggctgtccacgacgagccgc 111
              |||||||||||| ||||||||||||
Sbjct: 100564 gccatggctgtcgacgacgagccgc 100540
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 87       gccatggctgtccacgacgagccgc 111
                |||||||||||| ||||||||||||
Sbjct: 30833043 gccatggctgtcgacgacgagccgc 30833019



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 163      ccgacatggccgcgctcttc 182
                ||||||||||||||||||||
Sbjct: 33145992 ccgacatggccgcgctcttc 33146011
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 142     ccggccacctcatcccgatcgccga 166
               ||||||||||||||||||| |||||
Sbjct: 8018644 ccggccacctcatcccgatggccga 8018620
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>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0503B05
          Length = 156814

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 142  ccggccacctcatcccgatcgccga 166
            ||||||||||||||||||| |||||
Sbjct: 6837 ccggccacctcatcccgatggccga 6813
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>dbj|AP005613.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0082C09
          Length = 160665

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 142    ccggccacctcatcccgatcgccga 166
              ||||||||||||||||||| |||||
Sbjct: 142059 ccggccacctcatcccgatggccga 142035
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>dbj|AK099648.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065A21, full
            insert sequence
          Length = 2500

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 87   gccatggctgtccacgacgagccgc 111
            |||||||||||| ||||||||||||
Sbjct: 2255 gccatggctgtcgacgacgagccgc 2279
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>ref|XM_483004.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 769

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 167 catggccgcgctcttcgccg 186
           ||||||||||||||||||||
Sbjct: 124 catggccgcgctcttcgccg 143
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>ref|XM_474128.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2133

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 163  ccgacatggccgcgctcttc 182
            ||||||||||||||||||||
Sbjct: 1138 ccgacatggccgcgctcttc 1119
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>gb|AF527807.1| Sorghum bicolor clone BAC SB_BBc0126P21 php200725 orthologous region
          Length = 75840

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 203   caccatcctcaccacgcccgtcaacgcc 230
             ||||||| |||||||||||| |||||||
Sbjct: 67505 caccatcatcaccacgcccgccaacgcc 67478
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 160     tcgccgacatggccgcgctc 179
               ||||||||||||||||||||
Sbjct: 1337636 tcgccgacatggccgcgctc 1337617
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 160     tcgccgacatggccgcgctc 179
               ||||||||||||||||||||
Sbjct: 2122393 tcgccgacatggccgcgctc 2122412
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>emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete chromosome; segment 12/12
          Length = 273785

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 271   tcgccggcaccggctccccggcca 294
             |||||| |||||||||||||||||
Sbjct: 67464 tcgccgccaccggctccccggcca 67441
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>emb|Z79690.1|ANPFKA Aspergillus niger pfkA gene
          Length = 4658

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 148  acctcatcccgatcgccgac 167
            ||||||||||||||||||||
Sbjct: 4427 acctcatcccgatcgccgac 4408
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 160     tcgccgacatggccgcgctc 179
               ||||||||||||||||||||
Sbjct: 2250829 tcgccgacatggccgcgctc 2250810
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    atcgccgacatggccgcgct 178
              ||||||||||||||||||||
Sbjct: 964988 atcgccgacatggccgcgct 964969



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 256    gcgccaacgactccttcgcc 275
              ||||||||||||||||||||
Sbjct: 687987 gcgccaacgactccttcgcc 687968
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 138     gcctccggccacctcatccc 157
               ||||||||||||||||||||
Sbjct: 4466674 gcctccggccacctcatccc 4466655



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 138     gcctccggccacctcatccc 157
               ||||||||||||||||||||
Sbjct: 2457069 gcctccggccacctcatccc 2457088
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 167      catggccgcgctcttcgccg 186
                ||||||||||||||||||||
Sbjct: 23840735 catggccgcgctcttcgccg 23840754
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>dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBb0092C08
          Length = 131049

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 167    catggccgcgctcttcgccg 186
              ||||||||||||||||||||
Sbjct: 129935 catggccgcgctcttcgccg 129954
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>dbj|AP004213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1111_H02
          Length = 108603

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   catggccgcgctcttcgccg 186
             ||||||||||||||||||||
Sbjct: 32439 catggccgcgctcttcgccg 32458
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>dbj|AK119889.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-A02, full
            insert sequence
          Length = 2554

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 163  ccgacatggccgcgctcttc 182
            ||||||||||||||||||||
Sbjct: 1167 ccgacatggccgcgctcttc 1148
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>dbj|AK120146.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013028L17, full
            insert sequence
          Length = 2491

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 163  ccgacatggccgcgctcttc 182
            ||||||||||||||||||||
Sbjct: 1137 ccgacatggccgcgctcttc 1118
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>dbj|AK119579.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-B11, full
           insert sequence
          Length = 2001

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 163 ccgacatggccgcgctcttc 182
           ||||||||||||||||||||
Sbjct: 680 ccgacatggccgcgctcttc 661
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>dbj|AK107940.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-A12, full
           insert sequence
          Length = 769

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 167 catggccgcgctcttcgccg 186
           ||||||||||||||||||||
Sbjct: 124 catggccgcgctcttcgccg 143
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>dbj|AK100096.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004B22, full
            insert sequence
          Length = 2556

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 163  ccgacatggccgcgctcttc 182
            ||||||||||||||||||||
Sbjct: 1234 ccgacatggccgcgctcttc 1215
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    atcgccgacatggccgcgct 178
              ||||||||||||||||||||
Sbjct: 671141 atcgccgacatggccgcgct 671122
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>emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0212B02, complete
             sequence
          Length = 118971

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   ccgacatggccgcgctcttc 182
             ||||||||||||||||||||
Sbjct: 36375 ccgacatggccgcgctcttc 36394
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>gb|AF080235.1|AF080235 Streptomyces cyanogenus landomycin biosynthetic gene cluster, complete
             sequence
          Length = 34644

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   tcgccgacatggccgcgctc 179
             ||||||||||||||||||||
Sbjct: 21387 tcgccgacatggccgcgctc 21406
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>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02,
             complete sequence
          Length = 165745

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   ccgacatggccgcgctcttc 182
             ||||||||||||||||||||
Sbjct: 28642 ccgacatggccgcgctcttc 28661
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>emb|AL929212.8| Mouse DNA sequence from clone RP23-65G6 on chromosome 2, complete
              sequence
          Length = 255261

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 118    tcctcttcttcccgttcctg 137
              ||||||||||||||||||||
Sbjct: 172432 tcctcttcttcccgttcctg 172451


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,117,845
Number of Sequences: 3902068
Number of extensions: 2117845
Number of successful extensions: 41504
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40611
Number of HSP's gapped (non-prelim): 887
length of query: 313
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 291
effective length of database: 17,147,199,772
effective search space: 4989835133652
effective search space used: 4989835133652
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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