ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast10e02 |
|---|---|
| Clone Library Name | barley_pub |
>DBNBT_TAXCA (Q8LL69) 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase (EC| 2.3.1.-) (DBTNBT) Length = 441 Score = 43.1 bits (100), Expect = 2e-04 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 3/78 (3%) Frame = +2 Query: 68 SSSFKVTRISEGAVKPASETPDHTLPLAWVDRYPTHRGLVESMHIFRSGADAAPG---VI 238 S+ F V + V P+ +P T+ L+ VD RG+ ++ +F + + + +I Sbjct: 6 STDFHVKKFDPVMVAPSLPSPKATVQLSVVDSLTICRGIFNTLLVFNAPDNISADPVKII 65 Query: 239 REALGKALAFFYPLAXRI 292 REAL K L +++PLA R+ Sbjct: 66 REALSKVLVYYFPLAGRL 83
>HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) Length = 445 Score = 32.7 bits (73), Expect = 0.23 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 14/76 (18%) Frame = +2 Query: 107 VKPASETPDHTLPLAWVD---RYP-THRGLV----------ESMHIFRSGADAAPGVIRE 244 V+PA ETP+ +L L+ +D R P +H G V +++H S A ++ E Sbjct: 11 VRPAEETPNKSLWLSNIDMILRTPYSHTGAVLIYKQPDNNEDNIHPSSSMYFDA-NILIE 69 Query: 245 ALGKALAFFYPLAXRI 292 AL KAL FYP+A R+ Sbjct: 70 ALSKALVPFYPMAGRL 85
>HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) Length = 446 Score = 32.0 bits (71), Expect = 0.40 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 14/76 (18%) Frame = +2 Query: 107 VKPASETPDHTLPLAWVD---RYP-THRGLV----------ESMHIFRSGADAAPGVIRE 244 V+PA ETP+ +L L+ +D R P +H G V +++H S A ++ E Sbjct: 11 VRPAEETPNKSLWLSKIDMILRTPYSHTGAVLIYKQPDNNEDNIHPSSSMYFDA-NILIE 69 Query: 245 ALGKALAFFYPLAXRI 292 AL KAL +YP+A R+ Sbjct: 70 ALSKALVPYYPMAGRL 85
>HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) Length = 445 Score = 30.4 bits (67), Expect = 1.2 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 13/75 (17%) Frame = +2 Query: 107 VKPASETPDHTLPLAWVD---RYP-THRGLV---------ESMHIFRSGADAAPGVIREA 247 V+PA ETP+ +L L+ +D R P +H G V E S ++ EA Sbjct: 11 VRPAEETPNKSLWLSKIDMILRTPYSHTGAVLIYKQPDNNEDNIQPSSSMYFDANILIEA 70 Query: 248 LGKALAFFYPLAXRI 292 L KAL +YP+A R+ Sbjct: 71 LSKALVPYYPMAGRL 85
>GCM1_MOUSE (P70348) Chorion-specific transcription factor GCMa (Glial cells| missing homolog 1) (GCM motif protein 1) (mGCMa) (mGCM1) Length = 436 Score = 29.3 bits (64), Expect = 2.6 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Frame = +2 Query: 5 PRPKTPTRTIANTRLKEAAMASSSFKVTRISEGAVK--PASETPDHTLPLAW 154 PRP+T A +K+ MAS+S + A K PA +LPL W Sbjct: 155 PRPETKLEAEARRAMKKVHMASASNSLRMKGRPAAKALPAEIPSQGSLPLTW 206
>END4_ENTFA (Q834D0) Probable endonuclease 4 (EC 3.1.21.2) (Endonuclease IV)| (Endodeoxyribonuclease IV) Length = 297 Score = 29.3 bits (64), Expect = 2.6 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = -3 Query: 292 DAXRQRVEEGQRL-AQRLADHAGGRVGAGPE 203 D RQ +E Q L A ++ H G VGAGPE Sbjct: 89 DFLRQEIERAQALGATQITLHPGAHVGAGPE 119
>NMD3B_RAT (Q8VHN2) Glutamate [NMDA] receptor subunit 3B precursor| (N-methyl-D-aspartate receptor subtype 3B) (NR3B) (NMDAR3B) Length = 1002 Score = 28.9 bits (63), Expect = 3.4 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +1 Query: 1 RASSQDSHAHNRKHTPQRSGHGVVELQGD 87 +AS + HAH R+H+ + HGV L D Sbjct: 707 KASFPEMHAHMRRHSAPTTPHGVAMLTSD 735
>NMD3B_MOUSE (Q91ZU9) Glutamate [NMDA] receptor subunit 3B precursor| (N-methyl-D-aspartate receptor subunit NR3B) (NR3B) (NMDAR3B) (NMDA receptor NR4) (Nr4) Length = 1003 Score = 28.9 bits (63), Expect = 3.4 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +1 Query: 1 RASSQDSHAHNRKHTPQRSGHGVVELQGD 87 +AS + HAH R+H+ + HGV L D Sbjct: 707 KASFPEMHAHMRRHSAPTTPHGVAMLTSD 735
>GLMM_STAHJ (Q4L837) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 450 Score = 28.5 bits (62), Expect = 4.4 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = -3 Query: 322 GGAPLLRLLHDAXRQRVEEGQRLAQRLADHAGGRVG 215 G PL+R++ +A E+ QR AQR+AD ++G Sbjct: 415 GTEPLVRVMVEASTD--EDAQRFAQRIADEVQSKMG 448
>MTFA_VIBVY (Q7MN36) Putative RNA 2'-O-ribose methyltransferase mtfA (EC| 2.1.1.-) Length = 359 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/60 (26%), Positives = 28/60 (46%) Frame = -1 Query: 222 ASAPDRKMCIDSTRPRWVGYRSTHASGSVWSGVSDAGFTAPSEIRVTLKLDDAMAASLRR 43 A P +C ++ + GY +H + + G+ F A + R TLKL++A + R Sbjct: 141 AKKPVFHLCFVASGHCFAGYSYSHNNSRFFMGIPRLKFPADAPSRSTLKLEEAFHVFIPR 200
>MTFA_VIBVU (Q8DFB2) Putative RNA 2'-O-ribose methyltransferase mtfA (EC| 2.1.1.-) Length = 359 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/60 (26%), Positives = 28/60 (46%) Frame = -1 Query: 222 ASAPDRKMCIDSTRPRWVGYRSTHASGSVWSGVSDAGFTAPSEIRVTLKLDDAMAASLRR 43 A P +C ++ + GY +H + + G+ F A + R TLKL++A + R Sbjct: 141 AKKPVFHLCFVASGHCFAGYSYSHNNSRFFMGIPRLKFPADAPSRSTLKLEEAFHVFIPR 200
>HID_DROME (Q24106) Cell death protein W (Protein head involution defective)| (Protein wrinkled) Length = 410 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/45 (26%), Positives = 28/45 (62%) Frame = +2 Query: 5 PRPKTPTRTIANTRLKEAAMASSSFKVTRISEGAVKPASETPDHT 139 P P + + +++++ + A+ +S+S + S+GA AS++P+ T Sbjct: 32 PLPSSASSSVSSSGVSSASASSASSSSSASSDGASSAASQSPNTT 76
>SPL14_ARATH (Q8RY95) Squamosa promoter-binding-like protein 14 (SPL1-related| protein 2) Length = 1035 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/31 (38%), Positives = 22/31 (70%), Gaps = 1/31 (3%) Frame = +2 Query: 221 AAPGVIREALGKALAFFYPLAXRIVE-QPEK 310 AAP I ++LG+ +YP++ R+V+ QP++ Sbjct: 9 AAPMFIHQSLGRKRDLYYPMSNRLVQSQPQR 39
>DYHC_DICDI (P34036) Dynein heavy chain, cytosolic (DYHC)| Length = 4725 Score = 28.1 bits (61), Expect = 5.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +2 Query: 131 DHTLPLAWVDRYPTHRGLVESMHIFRSGADAAPG 232 DH+ WVD YPT L+ S ++ + D A G Sbjct: 1794 DHSKYSEWVDNYPTQLVLLTSQIVWSTQVDQALG 1827
>AROA_AERSA (Q03321) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 427 Score = 28.1 bits (61), Expect = 5.7 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Frame = +2 Query: 17 TPTRTIANTRLKEA----AMASSSFKVTRISEGAVKPASETPDHTLPLAWVDRYPTHR 178 T R I N R+KE AMA+ K+ EG + + TP L A +D Y HR Sbjct: 329 TSIRNIYNWRVKETDRLHAMATDVRKLGVSEEGDLHYITVTPPTQLKHAEIDTYKHHR 386
>TFE2_MESAU (P98180) Transcription factor E2-alpha| (Immunoglobulin-enhancer-binding factor E12/E47) (Transcription factor 3) (TCF-3) (Transcription regulator Pan) Length = 649 Score = 27.7 bits (60), Expect = 7.5 Identities = 20/54 (37%), Positives = 25/54 (46%) Frame = -1 Query: 270 KKASALPSASRITPGAASAPDRKMCIDSTRPRWVGYRSTHASGSVWSGVSDAGF 109 + A+A PSA TPG+A P +V S H S +WS S AGF Sbjct: 196 RDAAAYPSAK--TPGSAYPS----------PFYVADGSLHPSAELWSPPSQAGF 237
>HUTG_BACSU (P42068) Formimidoylglutamase (EC 3.5.3.8) (Formiminoglutamase)| (Formiminoglutamate hydrolase) Length = 319 Score = 27.7 bits (60), Expect = 7.5 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +2 Query: 200 IFRSGADAAPGVIREALGKALAFFYPLAXRIVEQ 301 I SGA APG IR+AL + A+ L +V + Sbjct: 49 ISHSGASFAPGTIRQALKHSSAYSAELGEHVVSE 82
>SYFB_NOVAD (Q2GAI7) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 796 Score = 23.9 bits (50), Expect(2) = 9.0 Identities = 12/41 (29%), Positives = 20/41 (48%) Frame = +2 Query: 200 IFRSGADAAPGVIREALGKALAFFYPLAXRIVEQPEKGCPA 322 I R A A GV++ +++A +P + +GCPA Sbjct: 175 IARDLAAAGLGVLKPIAAQSVAGSFPCPVEVRTDDPEGCPA 215 Score = 21.9 bits (45), Expect(2) = 9.0 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = +1 Query: 64 GVVELQGDADLG 99 G++EL GDA LG Sbjct: 134 GIIELPGDAPLG 145
>CFAH_MOUSE (P06909) Complement factor H precursor (Protein beta-1-H)| Length = 1234 Score = 27.3 bits (59), Expect = 9.8 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -1 Query: 159 STHASGSVWSGVSDAGFTAPSEIRVT 82 S+H G+ +S V D GF P E R+T Sbjct: 894 SSHEHGTTFSYVCDDGFRIPEENRIT 919
>GP63_LEIME (P43150) Leishmanolysin C1 precursor (EC 3.4.24.36) (Cell surface| protease) (Major surface glycoprotein) (Protein gp63) (Promastigote surface endopeptidase) (Major surface protease) Length = 646 Score = 27.3 bits (59), Expect = 9.8 Identities = 17/38 (44%), Positives = 21/38 (55%) Frame = -3 Query: 328 ADGGAPLLRLLHDAXRQRVEEGQRLAQRLADHAGGRVG 215 A GAP R +HDA + RV + AQR+A A VG Sbjct: 39 AHAGAPQHRCIHDAMQARVLQSV-AAQRMAPSAVSAVG 75
>MTFA_VIBF1 (Q5E7A8) Putative RNA 2'-O-ribose methyltransferase mtfA (EC| 2.1.1.-) Length = 359 Score = 27.3 bits (59), Expect = 9.8 Identities = 15/50 (30%), Positives = 25/50 (50%) Frame = -1 Query: 213 PDRKMCIDSTRPRWVGYRSTHASGSVWSGVSDAGFTAPSEIRVTLKLDDA 64 P +C + +VGY T+ + + G+ F A + R TLKL++A Sbjct: 144 PVLHICFIAPGHCYVGYSYTNNNSQFFMGIPRLKFPADAPSRSTLKLEEA 193 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.313 0.135 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,496,651 Number of Sequences: 219361 Number of extensions: 569335 Number of successful extensions: 1797 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 1767 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1794 length of database: 80,573,946 effective HSP length: 85 effective length of database: 61,928,261 effective search space used: 1486278264 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
