>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 279     gacgctggcgccgtccagatccg 301
               |||||||||||||||||||||||
Sbjct: 2847464 gacgctggcgccgtccagatccg 2847442

>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 242     tcgaggtgccgcaggcgcgcgg 263
               ||||||||||||||||||||||
Sbjct: 1106828 tcgaggtgccgcaggcgcgcgg 1106849

>ref|NM_153376.1| Homo sapiens coiled-coil domain containing 96 (CCDC96), mRNA
          Length = 1769

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 209  gcccaggccgccctaggaagag 230
            ||||||||||||||||||||||
Sbjct: 1406 gcccaggccgccctaggaagag 1427

>gb|BC112274.1| Homo sapiens coiled-coil domain containing 96, mRNA (cDNA clone
            MGC:138479 IMAGE:8327742), complete cds
          Length = 1780

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 209  gcccaggccgccctaggaagag 230
            ||||||||||||||||||||||
Sbjct: 1464 gcccaggccgccctaggaagag 1485

>gb|BC105055.1| Homo sapiens coiled-coil domain containing 96, mRNA (cDNA clone
            MGC:132715 IMAGE:8144058), complete cds
          Length = 1773

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 209  gcccaggccgccctaggaagag 230
            ||||||||||||||||||||||
Sbjct: 1464 gcccaggccgccctaggaagag 1485

>dbj|AK075056.1| Homo sapiens cDNA FLJ90575 fis, clone OVARC1001952, weakly similar to
            TRICHOHYALIN
          Length = 1769

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 209  gcccaggccgccctaggaagag 230
            ||||||||||||||||||||||
Sbjct: 1406 gcccaggccgccctaggaagag 1427

>gb|AC097382.3| Homo sapiens BAC clone RP11-367J11 from 4, complete sequence
          Length = 210515

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 209   gcccaggccgccctaggaagag 230
             ||||||||||||||||||||||
Sbjct: 55114 gcccaggccgccctaggaagag 55093

>gb|AY365053.1| Ralstonia eutropha JMP134 plasmid pJP4, complete sequence
          Length = 87688

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 175   ccgaggaagaacacgccgccg 195
             |||||||||||||||||||||
Sbjct: 67800 ccgaggaagaacacgccgccg 67780

>gb|AF311437.2|AH010657S2 Comamonas testosteroni plasmid pTSA incP1beta region, partial sequence
             and transposon Tntsa, complete sequence
          Length = 38756

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 175   ccgaggaagaacacgccgccg 195
             |||||||||||||||||||||
Sbjct: 12457 ccgaggaagaacacgccgccg 12437

>emb|AJ863570.1| IncP-1beta multiresistance plasmid pB8
          Length = 57198

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 175   ccgaggaagaacacgccgccg 195
             |||||||||||||||||||||
Sbjct: 21191 ccgaggaagaacacgccgccg 21171

>gb|CP000093.1| Ralstonia eutropha JMP134 plasmid 1, complete sequence
          Length = 87688

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 175   ccgaggaagaacacgccgccg 195
             |||||||||||||||||||||
Sbjct: 67800 ccgaggaagaacacgccgccg 67780

>gb|U66917.2| Pseudomonas sp. ADP atrazine catabolic plasmid pADP-1, complete
             sequence
          Length = 108845

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 175   ccgaggaagaacacgccgccg 195
             |||||||||||||||||||||
Sbjct: 78654 ccgaggaagaacacgccgccg 78674

>gb|DQ118863.1| Streptomyces fradiae strain NRRL18158 lipopeptide antibiotic A54145
             biosynthetic gene cluster, complete sequence
          Length = 126933

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                          
Query: 272   ccgcgcagacgctggcgccgtccagatcc 300
             |||||||||||||| ||||||||||||||
Sbjct: 46000 ccgcgcagacgctg-cgccgtccagatcc 45973

>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16
          Length = 349981

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 229   agcgtgccgggcgtcgaggtg 249
             |||||||||||||||||||||
Sbjct: 28383 agcgtgccgggcgtcgaggtg 28363

>emb|AL713915.10| Mouse DNA sequence from clone RP23-437C4 on chromosome 11 Contains part
              of the Odz2 gene for odd Oz/ten-m homolog 2 (Drosophila),
              complete sequence
          Length = 201133

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 56     ttctgccgaggttcccacacc 76
              |||||||||||||||||||||
Sbjct: 172479 ttctgccgaggttcccacacc 172499

>emb|AJ564903.1|UBA564903 Uncultured bacterium IncP-1beta multiresistance plasmid pB10
          Length = 64508

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 175   ccgaggaagaacacgccgccg 195
             |||||||||||||||||||||
Sbjct: 10326 ccgaggaagaacacgccgccg 10306

>emb|AJ561198.1|NSP561198 Actinomadura sp. ATCC 39727 gene cluster for biosynthesis of
             glycopeptide antibiotic A40926, strain ATCC 39727
          Length = 89153

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 86    cgtagcagcggccgccggcgatggg 110
             ||||||| |||||||||||||||||
Sbjct: 58833 cgtagcaacggccgccggcgatggg 58809

>gb|U67194.4|EAU67194 Enterobacter aerogenes plasmid R751, complete sequence
          Length = 53423

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 175   ccgaggaagaacacgccgccg 195
             |||||||||||||||||||||
Sbjct: 27176 ccgaggaagaacacgccgccg 27156

>dbj|AB063332.1| Delftia acidovorans plasmid pUO1 DNA, complete sequence
          Length = 67066

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 175   ccgaggaagaacacgccgccg 195
             |||||||||||||||||||||
Sbjct: 28881 ccgaggaagaacacgccgccg 28861

>emb|AM048832.1| Uncultured bacterium mercury resistance plasmid pTP6
          Length = 54344

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 175   ccgaggaagaacacgccgccg 195
             |||||||||||||||||||||
Sbjct: 22487 ccgaggaagaacacgccgccg 22467

>gb|DQ065837.1| Burkholderia cepacia strain 2a plasmid pIJB1, complete sequence
          Length = 99448

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 175   ccgaggaagaacacgccgccg 195
             |||||||||||||||||||||
Sbjct: 19324 ccgaggaagaacacgccgccg 19304

>gb|AY207497.1| Chlamydomonas reinhardtii CR057 protein gene, complete cds
          Length = 4765

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 310  gaggacgggaacggcgggctgctg 333
            |||| |||||||||||||||||||
Sbjct: 1221 gagggcgggaacggcgggctgctg 1198

>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16
          Length = 348074

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    gtgggccggcggccgggtcg 173
              ||||||||||||||||||||
Sbjct: 161022 gtgggccggcggccgggtcg 161003

>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14
          Length = 344805

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    gtgggccggcggccgggtcg 173
              ||||||||||||||||||||
Sbjct: 113693 gtgggccggcggccgggtcg 113674

>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29
          Length = 292200

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 160  cggcggccgggtcgcccgag 179
            ||||||||||||||||||||
Sbjct: 3947 cggcggccgggtcgcccgag 3928

>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29
          Length = 276800

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 240    cgtcgaggtgccgcaggcgcgcggcccg 267
              ||||| |||||||||||||| |||||||
Sbjct: 243085 cgtcgcggtgccgcaggcgcacggcccg 243112

>emb|AJ515144.2|AXY515144 Achromobacter xylosoxidans plasmid pA81, strain A8
          Length = 98192

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   ccgaggaagaacacgccgcc 194
             ||||||||||||||||||||
Sbjct: 11957 ccgaggaagaacacgccgcc 11938

>emb|AJ431260.1|UNK431260 Uncultured bacterium plasmid pB4 complete genome
          Length = 79370

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   ccgaggaagaacacgccgcc 194
             ||||||||||||||||||||
Sbjct: 51306 ccgaggaagaacacgccgcc 51287

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 177     gaggaagaacacgccgccgg 196
               ||||||||||||||||||||
Sbjct: 3157207 gaggaagaacacgccgccgg 3157226

>gb|AF389883.1| Triticum aestivum thaumatin-like protein 1 gene, complete cds
          Length = 633

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 117 gaggaagagcaccggggacg 136
           ||||||||||||||||||||
Sbjct: 84  gaggaagagcaccggggacg 65

>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence
          Length = 168794

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 310   gaggacgggaacggcgggctgctg 333
             |||| |||||||||||||||||||
Sbjct: 66204 gagggcgggaacggcgggctgctg 66227

>dbj|AB231906.2| Sphingomonas sp. A1 plasmid pA1 DNA, complete sequence
          Length = 46557

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   ccgaggaagaacacgccgcc 194
             ||||||||||||||||||||
Sbjct: 43192 ccgaggaagaacacgccgcc 43173

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 249     gccgcaggcgcgcggcccgg 268
               ||||||||||||||||||||
Sbjct: 2782365 gccgcaggcgcgcggcccgg 2782384

>ref|XM_578553.1| PREDICTED: Rattus norvegicus similar to ribosomal protein L31
           (LOC503032), mRNA
          Length = 597

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 160 cggcggccgggtcgcccgag 179
           ||||||||||||||||||||
Sbjct: 424 cggcggccgggtcgcccgag 443

>gb|AC160764.2| Ornithorhynchus anatinus BAC clone OABb-454A1 from chromosome unknown,
             complete sequence
          Length = 125050

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 255   ggcgcgcggcccggcctccgcgca 278
             ||||| ||||||||||||||||||
Sbjct: 42000 ggcgcccggcccggcctccgcgca 41977


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,976,393
Number of Sequences: 3902068
Number of extensions: 1976393
Number of successful extensions: 44146
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 43236
Number of HSP's gapped (non-prelim): 912
length of query: 348
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 326
effective length of database: 17,147,199,772
effective search space: 5589987125672
effective search space used: 5589987125672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)