ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast09f11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 90 5e-15
2dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic D... 90 5e-15
3dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic D... 90 5e-15
4dbj|AK104130.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 5e-15
5dbj|AK068955.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 5e-15
6dbj|AK058459.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 5e-15
7ref|XM_464429.1| Oryza sativa (japonica cultivar-group), mRNA 70 5e-09
8ref|XM_506741.1| PREDICTED Oryza sativa (japonica cultivar-group... 70 5e-09
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 70 5e-09
10dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic D... 70 5e-09
11dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic D... 70 5e-09
12dbj|AK065909.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 5e-09
13dbj|AK061629.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 5e-09
14gb|BT009091.1| Triticum aestivum clone wkm2c.pk0003.c3:fis, full... 60 4e-06
15gb|AY106451.1| Zea mays PCO082226 mRNA sequence 54 3e-04
16ref|XM_450025.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.067
17gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 46 0.067
18dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.067
19dbj|AP005860.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.067
20ref|NM_188717.1| Oryza sativa (japonica cultivar-group), predic... 44 0.27
21ref|XM_464855.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.27
22emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4,... 44 0.27
23dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.27
24dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.27
25dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.27
26dbj|AP003210.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.27
27dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.27
28dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.27
29dbj|AP007205.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.27
30dbj|AP004648.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.27
31dbj|AK107708.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.27
32dbj|AK101280.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.27
33dbj|AK063943.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.27
34gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 44 0.27
35gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.0
36gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 42 1.0
37gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 42 1.0
38emb|BX016489.1|CNS08KVX Single read from an extremity of a full-... 42 1.0
39gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 1.0
40dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
41ref|XM_311208.2| Anopheles gambiae str. PEST ENSANGP00000019075 ... 42 1.0
42gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 42 1.0
43ref|XM_475183.1| Oryza sativa (japonica cultivar-group), predic... 40 4.1
44gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome... 40 4.1
45gb|AC146328.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.1
46gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.1
47gb|AC108500.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.1
48gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 4.1
49gb|AC105773.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.1
50gb|AY359472.4| Xanthomonas campestris putative responder (smeR),... 40 4.1
51gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 4.1
52emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome... 40 4.1
53emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 4.1
54gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 4.1
55gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete... 40 4.1
56gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, comple... 40 4.1
57gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 4.1
58dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 40 4.1
59dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 4.1
60ref|XM_943479.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 4.1
61gb|CP000249.1| Frankia sp. CcI3, complete genome 40 4.1
62dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
63dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
64dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
65gb|AY677179.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (... 40 4.1
66gb|AC087738.13| Homo sapiens chromosome 15, clone RP11-365F16, c... 40 4.1
67gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 4.1
68dbj|AP005449.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
69dbj|AP003952.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
70ref|XM_310865.2| Anopheles gambiae str. PEST ENSANGP00000012597 ... 40 4.1
71dbj|AK108808.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.1
72emb|AJ333792.1|HSA333792 Homo sapiens genomic sequence surroundi... 40 4.1
73emb|AJ335338.1|HSA335338 Homo sapiens genomic sequence surroundi... 40 4.1
74dbj|AK066941.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.1
75gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.1
76gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.1
77emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa... 40 4.1 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                            
Query: 250      ccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgccacgctctcctact 309
                |||||| || |||||||||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 24830689 ccccggccgcggccaccatcgcggtcggggacaagctccccgacgcgacgctctcctact 24830748

                     
Query: 310      tcgac 314
                |||||
Sbjct: 24830749 tcgac 24830753



 Score = 48.1 bits (24), Expect = 0.017
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 109      cggccgccgccgccggcaggcgcttcgtcctctcctcccc 148
                ||||||| |||||||||| |||| || |||||||||||||
Sbjct: 24830539 cggccgcggccgccggcaagcgcctcctcctctcctcccc 24830578



 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 111      gccgccgccgccggcaggcgct 132
                ||||||||||||||||||||||
Sbjct: 25129922 gccgccgccgccggcaggcgct 25129901



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 117      gccgccggcaggcgcttcgtcctctcctcccc 148
                ||||||||||| ||||||  ||||||||||||
Sbjct: 13380436 gccgccggcagccgcttctccctctcctcccc 13380405
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>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0072A21
          Length = 158287

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                         
Query: 250   ccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgccacgctctcctact 309
             |||||| || |||||||||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 41772 ccccggccgcggccaccatcgcggtcggggacaagctccccgacgcgacgctctcctact 41831

                  
Query: 310   tcgac 314
             |||||
Sbjct: 41832 tcgac 41836



 Score = 48.1 bits (24), Expect = 0.017
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 109   cggccgccgccgccggcaggcgcttcgtcctctcctcccc 148
             ||||||| |||||||||| |||| || |||||||||||||
Sbjct: 41622 cggccgcggccgccggcaagcgcctcctcctctcctcccc 41661
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>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0029G06
          Length = 169711

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                          
Query: 250    ccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgccacgctctcctact 309
              |||||| || |||||||||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 164370 ccccggccgcggccaccatcgcggtcggggacaagctccccgacgcgacgctctcctact 164429

                   
Query: 310    tcgac 314
              |||||
Sbjct: 164430 tcgac 164434



 Score = 48.1 bits (24), Expect = 0.017
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                      
Query: 109    cggccgccgccgccggcaggcgcttcgtcctctcctcccc 148
              ||||||| |||||||||| |||| || |||||||||||||
Sbjct: 164220 cggccgcggccgccggcaagcgcctcctcctctcctcccc 164259
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>dbj|AK104130.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H07, full
           insert sequence
          Length = 1098

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                       
Query: 250 ccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgccacgctctcctact 309
           |||||| || |||||||||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 194 ccccggccgcggccaccatcgcggtcggggacaagctccccgacgcgacgctctcctact 253

                
Query: 310 tcgac 314
           |||||
Sbjct: 254 tcgac 258



 Score = 48.1 bits (24), Expect = 0.017
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 109 cggccgccgccgccggcaggcgcttcgtcctctcctcccc 148
           ||||||| |||||||||| |||| || |||||||||||||
Sbjct: 44  cggccgcggccgccggcaagcgcctcctcctctcctcccc 83
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>dbj|AK068955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003C09, full
           insert sequence
          Length = 1140

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                       
Query: 250 ccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgccacgctctcctact 309
           |||||| || |||||||||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 290 ccccggccgcggccaccatcgcggtcggggacaagctccccgacgcgacgctctcctact 349

                
Query: 310 tcgac 314
           |||||
Sbjct: 350 tcgac 354



 Score = 48.1 bits (24), Expect = 0.017
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 109 cggccgccgccgccggcaggcgcttcgtcctctcctcccc 148
           ||||||| |||||||||| |||| || |||||||||||||
Sbjct: 140 cggccgcggccgccggcaagcgcctcctcctctcctcccc 179
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>dbj|AK058459.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H12, full
           insert sequence
          Length = 1248

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                       
Query: 250 ccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgccacgctctcctact 309
           |||||| || |||||||||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 289 ccccggccgcggccaccatcgcggtcggggacaagctccccgacgcgacgctctcctact 348

                
Query: 310 tcgac 314
           |||||
Sbjct: 349 tcgac 353



 Score = 48.1 bits (24), Expect = 0.017
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 109 cggccgccgccgccggcaggcgcttcgtcctctcctcccc 148
           ||||||| |||||||||| |||| || |||||||||||||
Sbjct: 139 cggccgcggccgccggcaagcgcctcctcctctcctcccc 178
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>ref|XM_464429.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 912

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                       
Query: 237 gcggcatcggcatccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgcc 296
           ||||| ||||| ||| | || ||||| |||||||| ||||| |||||||| |||||||| 
Sbjct: 210 gcggcgtcggcgtccaccgtggtggcgaccatcgccgtcggagacaagctccccgacgcg 269

                              
Query: 297 acgctctcctacttcgacc 315
           ||||| |||||||||||||
Sbjct: 270 acgctgtcctacttcgacc 288
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>ref|XM_506741.1| PREDICTED Oryza sativa (japonica cultivar-group), P0453H10.33 mRNA
          Length = 994

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                       
Query: 237 gcggcatcggcatccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgcc 296
           ||||| ||||| ||| | || ||||| |||||||| ||||| |||||||| |||||||| 
Sbjct: 208 gcggcgtcggcgtccaccgtggtggcgaccatcgccgtcggagacaagctccccgacgcg 267

                              
Query: 297 acgctctcctacttcgacc 315
           ||||| |||||||||||||
Sbjct: 268 acgctgtcctacttcgacc 286
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                           
Query: 237     gcggcatcggcatccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgcc 296
               ||||| ||||| ||| | || ||||| |||||||| ||||| |||||||| |||||||| 
Sbjct: 5167781 gcggcgtcggcgtccaccgtggtggcgaccatcgccgtcggagacaagctccccgacgcg 5167722

                                  
Query: 297     acgctctcctacttcgacc 315
               ||||| |||||||||||||
Sbjct: 5167721 acgctgtcctacttcgacc 5167703



 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 101     gtcctcgtcggccgccgccgcc 122
               ||||||||||||||||||||||
Sbjct: 8582857 gtcctcgtcggccgccgccgcc 8582836
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>dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0453H10
          Length = 133464

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                          
Query: 237    gcggcatcggcatccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgcc 296
              ||||| ||||| ||| | || ||||| |||||||| ||||| |||||||| |||||||| 
Sbjct: 128279 gcggcgtcggcgtccaccgtggtggcgaccatcgccgtcggagacaagctccccgacgcg 128220

                                 
Query: 297    acgctctcctacttcgacc 315
              ||||| |||||||||||||
Sbjct: 128219 acgctgtcctacttcgacc 128201
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>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0437H03
          Length = 170173

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                         
Query: 237   gcggcatcggcatccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgcc 296
             ||||| ||||| ||| | || ||||| |||||||| ||||| |||||||| |||||||| 
Sbjct: 61234 gcggcgtcggcgtccaccgtggtggcgaccatcgccgtcggagacaagctccccgacgcg 61175

                                
Query: 297   acgctctcctacttcgacc 315
             ||||| |||||||||||||
Sbjct: 61174 acgctgtcctacttcgacc 61156
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>dbj|AK065909.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043E11, full
           insert sequence
          Length = 912

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                       
Query: 237 gcggcatcggcatccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgcc 296
           ||||| ||||| ||| | || ||||| |||||||| ||||| |||||||| |||||||| 
Sbjct: 210 gcggcgtcggcgtccaccgtggtggcgaccatcgccgtcggagacaagctccccgacgcg 269

                              
Query: 297 acgctctcctacttcgacc 315
           ||||| |||||||||||||
Sbjct: 270 acgctgtcctacttcgacc 288
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>dbj|AK061629.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-H06, full
           insert sequence
          Length = 994

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                       
Query: 237 gcggcatcggcatccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgcc 296
           ||||| ||||| ||| | || ||||| |||||||| ||||| |||||||| |||||||| 
Sbjct: 208 gcggcgtcggcgtccaccgtggtggcgaccatcgccgtcggagacaagctccccgacgcg 267

                              
Query: 297 acgctctcctacttcgacc 315
           ||||| |||||||||||||
Sbjct: 268 acgctgtcctacttcgacc 286
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>gb|BT009091.1| Triticum aestivum clone wkm2c.pk0003.c3:fis, full insert mRNA
           sequence
          Length = 1123

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 265 ccatcgcggtcggcgacaagctgcccgacgccacgctctcctacttcgac 314
           |||||||||||||||||  ||| ||||| || ||||||||||||||||||
Sbjct: 241 ccatcgcggtcggcgaccggctccccgaagcgacgctctcctacttcgac 290
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>gb|AY106451.1| Zea mays PCO082226 mRNA sequence
          Length = 1137

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 264 accatcgcggtcggcgacaagctgcccgacgccacgctctcctacttcgac 314
           |||||||||||||| |||  ||| || ||||| ||||||||||||||||||
Sbjct: 291 accatcgcggtcggggaccggctccctgacgcgacgctctcctacttcgac 341
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>ref|XM_450025.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 903

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 250 ccccggtcgtggccaccatcgcggtcg 276
           |||||| ||||||||||||||||||||
Sbjct: 675 ccccggccgtggccaccatcgcggtcg 649
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 264     accatcgcggtcggcgacaagctgccc 290
               ||||||||||| |||||||||||||||
Sbjct: 1289526 accatcgcggtaggcgacaagctgccc 1289500
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 250     ccccggtcgtggccaccatcgcggtcg 276
               |||||| ||||||||||||||||||||
Sbjct: 1068433 ccccggccgtggccaccatcgcggtcg 1068407
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>dbj|AP005860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1134_E08
          Length = 153002

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 250    ccccggtcgtggccaccatcgcggtcg 276
              |||||| ||||||||||||||||||||
Sbjct: 106126 ccccggccgtggccaccatcgcggtcg 106100
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>ref|NM_188717.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 357

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 102 tcctcgtcggccgccgccgccg 123
           ||||||||||||||||||||||
Sbjct: 26  tcctcgtcggccgccgccgccg 5
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>ref|XM_464855.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1526

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 101 gtcctcgtcggccgccgccgcc 122
           ||||||||||||||||||||||
Sbjct: 752 gtcctcgtcggccgccgccgcc 731
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>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19,
              complete sequence
          Length = 187601

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 102    tcctcgtcggccgccgccgccg 123
              ||||||||||||||||||||||
Sbjct: 130488 tcctcgtcggccgccgccgccg 130467
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 102      tcctcgtcggccgccgccgccg 123
                ||||||||||||||||||||||
Sbjct: 31797218 tcctcgtcggccgccgccgccg 31797197
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 111     gccgccgccgccggcaggcgct 132
               ||||||||||||||||||||||
Sbjct: 8204040 gccgccgccgccggcaggcgct 8204019
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 102     tcctcgtcggccgccgccgccg 123
               ||||||||||||||||||||||
Sbjct: 7816837 tcctcgtcggccgccgccgccg 7816816
to top
>dbj|AP003210.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0010K01
          Length = 144404

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 102    tcctcgtcggccgccgccgccg 123
              ||||||||||||||||||||||
Sbjct: 119418 tcctcgtcggccgccgccgccg 119397
to top
>dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1066G12
          Length = 136263

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 102   tcctcgtcggccgccgccgccg 123
             ||||||||||||||||||||||
Sbjct: 11783 tcctcgtcggccgccgccgccg 11762
to top
>dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0009N02
          Length = 121142

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 101   gtcctcgtcggccgccgccgcc 122
             ||||||||||||||||||||||
Sbjct: 52180 gtcctcgtcggccgccgccgcc 52159
to top
>dbj|AP007205.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0048L03
          Length = 142377

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 111   gccgccgccgccggcaggcgct 132
             ||||||||||||||||||||||
Sbjct: 76108 gccgccgccgccggcaggcgct 76087
to top
>dbj|AP004648.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1449_H02
          Length = 117860

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 111   gccgccgccgccggcaggcgct 132
             ||||||||||||||||||||||
Sbjct: 36722 gccgccgccgccggcaggcgct 36701
to top
>dbj|AK107708.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-D06, full
           insert sequence
          Length = 708

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 102 tcctcgtcggccgccgccgccg 123
           ||||||||||||||||||||||
Sbjct: 137 tcctcgtcggccgccgccgccg 116
to top
>dbj|AK101280.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033C18, full
           insert sequence
          Length = 1459

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 101 gtcctcgtcggccgccgccgcc 122
           ||||||||||||||||||||||
Sbjct: 685 gtcctcgtcggccgccgccgcc 664
to top
>dbj|AK063943.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-E07, full
           insert sequence
          Length = 1562

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 101 gtcctcgtcggccgccgccgcc 122
           ||||||||||||||||||||||
Sbjct: 788 gtcctcgtcggccgccgccgcc 767
to top
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 106     cgtcggccgccgccgccggcaggcgc 131
               ||||||||| ||||||||||||||||
Sbjct: 2873322 cgtcggccgacgccgccggcaggcgc 2873347
to top
>gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1764_D01,
              complete sequence
          Length = 164709

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 103    cctcgtcggccgccgccgccg 123
              |||||||||||||||||||||
Sbjct: 138278 cctcgtcggccgccgccgccg 138258
to top
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 275    cggcgacaagctgcccgacgc 295
              |||||||||||||||||||||
Sbjct: 166988 cggcgacaagctgcccgacgc 167008
to top
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 279     gacaagctgcccgacgccacgctct 303
               ||||||||||||||||| |||||||
Sbjct: 4335841 gacaagctgcccgacgcaacgctct 4335817
to top
>emb|BX016489.1|CNS08KVX Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA24DB01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 495

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 234 tccgcggcatcggcatccccg 254
           |||||||||||||||||||||
Sbjct: 72  tccgcggcatcggcatccccg 52
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 101     gtcctcgtcggccgccgccgc 121
               |||||||||||||||||||||
Sbjct: 1900272 gtcctcgtcggccgccgccgc 1900252
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 103      cctcgtcggccgccgccgccg 123
                |||||||||||||||||||||
Sbjct: 18970900 cctcgtcggccgccgccgccg 18970880



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 101      gtcctcgtcggccgccgccg 120
                ||||||||||||||||||||
Sbjct: 24557925 gtcctcgtcggccgccgccg 24557906



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 105      tcgtcggccgccgccgccgg 124
                ||||||||||||||||||||
Sbjct: 22607552 tcgtcggccgccgccgccgg 22607571



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 104      ctcgtcggccgccgccgccg 123
                ||||||||||||||||||||
Sbjct: 18730257 ctcgtcggccgccgccgccg 18730276
to top
>ref|XM_311208.2| Anopheles gambiae str. PEST ENSANGP00000019075 (ENSANGG00000016586),
            partial mRNA
          Length = 1248

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 234  tccgcggcatcggcatccccg 254
            |||||||||||||||||||||
Sbjct: 1049 tccgcggcatcggcatccccg 1069
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 106    cgtcggccgccgccgccggca 126
              |||||||||||||||||||||
Sbjct: 374846 cgtcggccgccgccgccggca 374866
to top
>ref|XM_475183.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3213

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 104  ctcgtcggccgccgccgccg 123
            ||||||||||||||||||||
Sbjct: 1155 ctcgtcggccgccgccgccg 1136
to top
>gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0018H01
             map R1538, complete sequence
          Length = 142712

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   tcctcgtcggccgccgccgc 121
             ||||||||||||||||||||
Sbjct: 36702 tcctcgtcggccgccgccgc 36683
to top
>gb|AC146328.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0018J01, complete sequence
          Length = 82510

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   ctcgtcggccgccgccgccg 123
             ||||||||||||||||||||
Sbjct: 19271 ctcgtcggccgccgccgccg 19252
to top
>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0017K09, complete sequence
          Length = 155525

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   gtcctcgtcggccgccgccg 120
             ||||||||||||||||||||
Sbjct: 72107 gtcctcgtcggccgccgccg 72088
to top
>gb|AC108500.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1280_A04,
             complete sequence
          Length = 88553

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   tcgtcggccgccgccgccgg 124
             ||||||||||||||||||||
Sbjct: 20090 tcgtcggccgccgccgccgg 20109
to top
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 261     gccaccatcgcggtcggcga 280
               ||||||||||||||||||||
Sbjct: 3863102 gccaccatcgcggtcggcga 3863121
to top
>gb|AC105773.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1562_H01,
             complete sequence
          Length = 88352

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   ctcgtcggccgccgccgccg 123
             ||||||||||||||||||||
Sbjct: 35660 ctcgtcggccgccgccgccg 35679
to top
>gb|AY359472.4| Xanthomonas campestris putative responder (smeR), putative kinase
           sensor (smeS), and inner membrane protein (smeA) genes,
           complete cds; and unknown genes
          Length = 9200

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 108 tcggccgccgccgccggcag 127
           ||||||||||||||||||||
Sbjct: 901 tcggccgccgccgccggcag 920
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 102      tcctcgtcggccgccgccgc 121
                ||||||||||||||||||||
Sbjct: 28376340 tcctcgtcggccgccgccgc 28376359
to top
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13
          Length = 349606

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   gccaccatcgcggtcggcga 280
             ||||||||||||||||||||
Sbjct: 59978 gccaccatcgcggtcggcga 59997
to top
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             13/14
          Length = 316050

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   gccaccatcgcggtcggcga 280
             ||||||||||||||||||||
Sbjct: 73854 gccaccatcgcggtcggcga 73873
to top
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 108     tcggccgccgccgccggcaggcgc 131
               ||||||||||| ||||||||||||
Sbjct: 3566057 tcggccgccgcggccggcaggcgc 3566034
to top
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence
          Length = 102653

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   ccgccgccgccggcaggcgc 131
             ||||||||||||||||||||
Sbjct: 89322 ccgccgccgccggcaggcgc 89303
to top
>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence
          Length = 79677

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   ccgccgccgccggcaggcgc 131
             ||||||||||||||||||||
Sbjct: 40551 ccgccgccgccggcaggcgc 40570
to top
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    tcctcgtcggccgccgccgc 121
              ||||||||||||||||||||
Sbjct: 951776 tcctcgtcggccgccgccgc 951795



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 270    gcggtcggcgacaagctgcc 289
              ||||||||||||||||||||
Sbjct: 350867 gcggtcggcgacaagctgcc 350848
to top
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113
          Length = 1841713

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 234    tccgcggcatcggcatcccc 253
              ||||||||||||||||||||
Sbjct: 327219 tccgcggcatcggcatcccc 327238
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    cctcgtcggccgccgccgcc 122
              ||||||||||||||||||||
Sbjct: 868381 cctcgtcggccgccgccgcc 868400
to top
>ref|XM_943479.1| PREDICTED: Homo sapiens hypothetical protein LOC648827 (LOC648827),
           mRNA
          Length = 612

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 ccgccgccgccggcaggcgc 131
           ||||||||||||||||||||
Sbjct: 391 ccgccgccgccggcaggcgc 372
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 275     cggcgacaagctgcccgacg 294
               ||||||||||||||||||||
Sbjct: 3393120 cggcgacaagctgcccgacg 3393139
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 105      tcgtcggccgccgccgccgg 124
                ||||||||||||||||||||
Sbjct: 14928665 tcgtcggccgccgccgccgg 14928684
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 104     ctcgtcggccgccgccgccg 123
               ||||||||||||||||||||
Sbjct: 4201539 ctcgtcggccgccgccgccg 4201558
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 102      tcctcgtcggccgccgccgc 121
                ||||||||||||||||||||
Sbjct: 28467664 tcctcgtcggccgccgccgc 28467683
to top
>gb|AY677179.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS3) mRNA,
           complete cds
          Length = 1576

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 106 cgtcggccgccgccgccggc 125
           ||||||||||||||||||||
Sbjct: 79  cgtcggccgccgccgccggc 60
to top
>gb|AC087738.13| Homo sapiens chromosome 15, clone RP11-365F16, complete sequence
          Length = 181511

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 112    ccgccgccgccggcaggcgc 131
              ||||||||||||||||||||
Sbjct: 108246 ccgccgccgccggcaggcgc 108227
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 290     cgacgccacgctctcctacttcga 313
               |||||||||||||||| |||||||
Sbjct: 3301631 cgacgccacgctctccgacttcga 3301608
to top
>dbj|AP005449.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0427E01
          Length = 146395

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 117    gccgccggcaggcgcttcgtcctctcctcccc 148
              ||||||||||| ||||||  ||||||||||||
Sbjct: 142246 gccgccggcagccgcttctccctctcctcccc 142215
to top
>dbj|AP003952.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1294_G12
          Length = 121979

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 117   gccgccggcaggcgcttcgtcctctcctcccc 148
             ||||||||||| ||||||  ||||||||||||
Sbjct: 41868 gccgccggcagccgcttctccctctcctcccc 41837
to top
>ref|XM_310865.2| Anopheles gambiae str. PEST ENSANGP00000012597
           (ENSANGG00000009998), partial mRNA
          Length = 2154

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 268 tcgcggtcggcgacaagctg 287
           ||||||||||||||||||||
Sbjct: 461 tcgcggtcggcgacaagctg 480
to top
>dbj|AK108808.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-D04, full
            insert sequence
          Length = 3427

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 104  ctcgtcggccgccgccgccg 123
            ||||||||||||||||||||
Sbjct: 1288 ctcgtcggccgccgccgccg 1269
to top
>emb|AJ333792.1|HSA333792 Homo sapiens genomic sequence surrounding NotI site, clone NL6-HO8R
          Length = 500

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 ccgccgccgccggcaggcgc 131
           ||||||||||||||||||||
Sbjct: 40  ccgccgccgccggcaggcgc 21
to top
>emb|AJ335338.1|HSA335338 Homo sapiens genomic sequence surrounding NotI site, clone NL1-ZL7C
          Length = 709

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 ccgccgccgccggcaggcgc 131
           ||||||||||||||||||||
Sbjct: 39  ccgccgccgccggcaggcgc 20
to top
>dbj|AK066941.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089J18, full
           insert sequence
          Length = 2696

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 ctcgtcggccgccgccgccg 123
           ||||||||||||||||||||
Sbjct: 231 ctcgtcggccgccgccgccg 250
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 104     ctcgtcggccgccgccgccg 123
               ||||||||||||||||||||
Sbjct: 4210233 ctcgtcggccgccgccgccg 4210252
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 105      tcgtcggccgccgccgccgg 124
                ||||||||||||||||||||
Sbjct: 14882948 tcgtcggccgccgccgccgg 14882967
to top
>emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa0068D20 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 174521

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    tcgtcggccgccgccgccgg 124
              ||||||||||||||||||||
Sbjct: 153182 tcgtcggccgccgccgccgg 153163


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,303,931
Number of Sequences: 3902068
Number of extensions: 2303931
Number of successful extensions: 80457
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76417
Number of HSP's gapped (non-prelim): 4040
length of query: 315
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 293
effective length of database: 17,147,199,772
effective search space: 5024129533196
effective search space used: 5024129533196
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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