Clone Information

BLAST Search Result

Clone Name	bast09e01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL13A_PICMA (O65055) 60S ribosomal protein L13a	161	5e-42
2	R13AA_ARATH (Q9SFU1) 60S ribosomal protein L13a-1	161	2e-41
3	R13AD_ARATH (Q9FKC0) 60S ribosomal protein L13a-4	161	2e-41
4	R13AB_ARATH (Q9LRX8) 60S ribosomal protein L13a-2	159	6e-41
5	R13AC_ARATH (Q9SVR0) 60S ribosomal protein L13a-3	157	2e-40
6	RL13A_LUPLU (O49885) 60S ribosomal protein L13a	147	3e-37
7	RL13A_CAEEL (Q27389) 60S ribosomal protein L13a	94	8e-22
8	RL13A_CYAPA (P93099) 60S ribosomal protein L13a	100	1e-21
9	RL13A_RAT (P35427) 60S ribosomal protein L13a	100	1e-21
10	RL13A_PIG (Q95307) 60S ribosomal protein L13a (Fragment)	100	2e-21
11	RL13A_PONPY (Q5RA38) 60S ribosomal protein L13a	100	2e-21
12	RL13A_MOUSE (P19253) 60S ribosomal protein L13a (Transplantation...	100	2e-21
13	RL13A_MACFA (Q4R8Z2) 60S ribosomal protein L13a	100	2e-21
14	RL13A_HUMAN (P40429) 60S ribosomal protein L13a (23 kDa highly b...	100	2e-21
15	RL13A_BOVIN (Q3SZ90) 60S ribosomal protein L13a	100	2e-21
16	RL13A_SPOFR (Q962U0) 60S ribosomal protein L13A	99	3e-21
17	RL13A_CHOPR (Q8MUR4) 60S ribosomal protein L13A	98	4e-21
18	RL13A_DROME (Q9VNE9) 60S ribosomal protein L13A	96	2e-20
19	RL16B_SCHPO (O42991) 60S ribosomal protein L16-B	95	4e-20
20	RL16A_SCHPO (O42848) 60S ribosomal protein L16-A	95	4e-20
21	RL16C_SCHPO (O43004) 60S ribosomal protein L16-C	92	3e-19
22	RL13A_SALTR (Q91487) 60S ribosomal protein L13a (Transplantation...	90	2e-18
23	RL16_NEUCR (Q9P720) 60S ribosomal protein L16	87	1e-17
24	RL16A_YEAST (P26784) 60S ribosomal protein L16-A (L13A) (RP22)	86	2e-17
25	RL16B_YEAST (P26785) 60S ribosomal protein L16-B (YL15) (RP23)	84	9e-17
26	RL13_ARCFU (O29137) 50S ribosomal protein L13P	50	2e-06
27	RLSX_METTH (O26146) Fused L13/S9 ribosomal protein [Includes: 50...	46	1e-05
28	RL13_AERPE (Q9YB50) 50S ribosomal protein L13P	44	1e-04
29	RL13_PYRAB (Q9V196) 50S ribosomal protein L13P	44	1e-04
30	RL13_PYRHO (O59300) 50S ribosomal protein L13P	43	2e-04
31	RL13_HALSA (Q9HQJ3) 50S ribosomal protein L13P	40	0.001
32	RL13_METJA (P54023) 50S ribosomal protein L13P	40	0.002
33	RL13_HALMA (P29198) 50S ribosomal protein L13P (Hmal13)	39	0.004
34	RL13_SULAC (P39473) 50S ribosomal protein L13P	37	0.009
35	RL13_THEMA (Q9X1G5) 50S ribosomal protein L13	34	0.10
36	RL13_MYCLE (P38014) 50S ribosomal protein L13	32	0.50
37	RL13_AQUAE (O67722) 50S ribosomal protein L13	31	0.86
38	RL13_STAS1 (Q49ZD6) 50S ribosomal protein L13	30	1.1
39	RL13_BACSU (P70974) 50S ribosomal protein L13	30	1.1
40	NAT6_MOUSE (Q9R123) N-acetyltransferase 6 (EC 2.3.1.-) (Fus-2 pr...	30	1.1
41	CAPU_DROME (Q24120) Protein cappuccino	30	1.5
42	RL13_STRCO (Q53874) 50S ribosomal protein L13	30	1.9
43	P53_CHICK (P10360) Cellular tumor antigen p53 (Tumor suppressor ...	29	2.5
44	VPAP_HCMVA (P16790) DNA polymerase processivity factor (Polymera...	29	2.5
45	TSP4_HUMAN (P35443) Thrombospondin-4 precursor	29	2.5
46	PTPA1_CANAL (Q5ADP9) Serine/threonine-protein phosphatase 2A act...	29	3.3
47	MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)	29	3.3
48	RL13_DEIRA (Q9RXY1) 50S ribosomal protein L13	28	4.3
49	RL13_CHLPN (Q9Z8T7) 50S ribosomal protein L13	28	4.3
50	RL13A_SPIOL (P82454) 60S ribosomal protein L13a (Fragment)	28	4.3
51	RL13_STAEQ (Q5HM31) 50S ribosomal protein L13	28	4.3
52	ECT2_MOUSE (Q07139) ECT2 protein (Epithelial cell-transforming s...	28	4.3
53	DIAP1_MOUSE (O08808) Protein diaphanous homolog 1 (Diaphanous-re...	28	4.3
54	RL13_STACA (Q00990) 50S ribosomal protein L13	28	5.6
55	COQ6_CAEEL (O01884) Probable ubiquinone biosynthesis monooxgenas...	28	5.6
56	RL13_RHOPA (Q6N651) 50S ribosomal protein L13 (RRP-L13)	28	5.6
57	SGS3_DROSI (P13729) Salivary glue protein Sgs-3 precursor	28	7.3
58	NLP32_CAEEL (Q09982) Putative neuropeptide-like protein 32 precu...	28	7.3
59	DIAP2_HUMAN (O60879) Protein diaphanous homolog 2 (Diaphanous-re...	28	7.3
60	LATS1_MOUSE (Q8BYR2) Serine/threonine-protein kinase LATS1 (EC 2...	28	7.3
61	LATS1_HUMAN (O95835) Serine/threonine-protein kinase LATS1 (EC 2...	28	7.3
62	WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-W...	27	9.5
63	PDXH_NOCFA (Q5Z236) Pyridoxamine 5'-phosphate oxidase (EC 1.4.3....	27	9.5
64	TSP4_MOUSE (Q9Z1T2) Thrombospondin-4 precursor	27	9.5
65	THID_SALTY (P55882) Phosphomethylpyrimidine kinase (EC 2.7.4.7) ...	27	9.5
66	CBX4_HUMAN (O00257) Chromobox protein homolog 4 (Polycomb 2 homo...	27	9.5
67	RK13_SPIOL (P12629) 50S ribosomal protein L13, chloroplast precu...	27	9.5
68	VGLC_EHV1D (P68325) Glycoprotein C precursor (Glycoprotein 13)	27	9.5
69	VGLC_EHV1B (Q6S6Q5) Glycoprotein C precursor (Glycoprotein 13)	27	9.5
70	DIAP2_MOUSE (O70566) Protein diaphanous homolog 2 (Diaphanous-re...	27	9.5
71	TSP4_RAT (P49744) Thrombospondin-4 precursor	27	9.5

>RL13A_PICMA (O65055) 60S ribosomal protein L13a|
          Length = 206

 Score =  161 bits (407), Expect(2) = 5e-42
 Identities = 77/83 (92%), Positives = 82/83 (98%)
 Frame = +1

Query: 70  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 249
           MVSGSG+CAK VVVDARHHMLGRLASI+AKELL+GQRVVVVRCEEICMSGGLVRQKMKYL
Sbjct: 1   MVSGSGICAKEVVVDARHHMLGRLASILAKELLHGQRVVVVRCEEICMSGGLVRQKMKYL 60

Query: 250 RFLRKRMNTKPSHGPIHFRAPAK 318
           RFLRKRMNTKPSHGPIHFRAP++
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSR 83



 Score = 27.7 bits (60), Expect(2) = 5e-42
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = +3

Query: 309 PGQVLWRTIRGMI 347
           P ++LWRTIRGMI
Sbjct: 81  PSRILWRTIRGMI 93

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>R13AA_ARATH (Q9SFU1) 60S ribosomal protein L13a-1|
          Length = 206

 Score =  161 bits (408), Expect(2) = 2e-41
 Identities = 75/83 (90%), Positives = 82/83 (98%)
 Frame = +1

Query: 70  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 249
           MVSGSG+CAKRVVVDARHHMLGRLAS+VAK+LLNGQ +VVVRCEEIC+SGGLVRQKMKY+
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYM 60

Query: 250 RFLRKRMNTKPSHGPIHFRAPAK 318
           RFLRKRMNTKPSHGPIHFRAP+K
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSK 83



 Score = 25.8 bits (55), Expect(2) = 2e-41
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 309 PGQVLWRTIRGMI 347
           P ++ WRT+RGMI
Sbjct: 81  PSKIFWRTVRGMI 93

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>R13AD_ARATH (Q9FKC0) 60S ribosomal protein L13a-4|
          Length = 206

 Score =  161 bits (407), Expect(2) = 2e-41
 Identities = 75/83 (90%), Positives = 82/83 (98%)
 Frame = +1

Query: 70  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 249
           MVSGSG+C+KRVVVDARHHMLGRLASI AKELLNGQ+VV+VRCEEIC+SGGLVRQKMKY+
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 250 RFLRKRMNTKPSHGPIHFRAPAK 318
           RFLRKRMNTKPSHGPIHFRAP+K
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSK 83



 Score = 25.8 bits (55), Expect(2) = 2e-41
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 309 PGQVLWRTIRGMI 347
           P ++ WRT+RGMI
Sbjct: 81  PSKIFWRTVRGMI 93

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>R13AB_ARATH (Q9LRX8) 60S ribosomal protein L13a-2|
          Length = 206

 Score =  159 bits (403), Expect(2) = 6e-41
 Identities = 75/83 (90%), Positives = 81/83 (97%)
 Frame = +1

Query: 70  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 249
           MVSGSG+C+KRVVVDARHHM GRLASI+AKELLNGQ VVVVRCEEIC+SGGLVRQKMKY+
Sbjct: 1   MVSGSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYM 60

Query: 250 RFLRKRMNTKPSHGPIHFRAPAK 318
           RFLRKRMNTKPSHGPIHFRAP+K
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSK 83



 Score = 25.8 bits (55), Expect(2) = 6e-41
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 309 PGQVLWRTIRGMI 347
           P ++ WRT+RGMI
Sbjct: 81  PSKIFWRTVRGMI 93

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>R13AC_ARATH (Q9SVR0) 60S ribosomal protein L13a-3|
          Length = 206

 Score =  157 bits (398), Expect(2) = 2e-40
 Identities = 75/83 (90%), Positives = 79/83 (95%)
 Frame = +1

Query: 70  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 249
           MVSGSG+CAKRVVVD RHHMLGRLAS  AKELLNGQ VVVVRCEEIC+SGGLVRQKMKY+
Sbjct: 1   MVSGSGICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYM 60

Query: 250 RFLRKRMNTKPSHGPIHFRAPAK 318
           RFLRKRMNTKPSHGPIHFRAP+K
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSK 83



 Score = 25.8 bits (55), Expect(2) = 2e-40
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 309 PGQVLWRTIRGMI 347
           P ++ WRT+RGMI
Sbjct: 81  PSKIFWRTVRGMI 93

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>RL13A_LUPLU (O49885) 60S ribosomal protein L13a|
          Length = 205

 Score =  147 bits (371), Expect(2) = 3e-37
 Identities = 74/83 (89%), Positives = 79/83 (95%)
 Frame = +1

Query: 70  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 249
           MVSGSG+ AKRVVVDARHHMLGRLASIVAKELLNGQ+VV+VR EEIC+SGGLVRQKMKYL
Sbjct: 1   MVSGSGIAAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRSEEICISGGLVRQKMKYL 60

Query: 250 RFLRKRMNTKPSHGPIHFRAPAK 318
           RFLRKRMNTKPSHGPIH  AP+K
Sbjct: 61  RFLRKRMNTKPSHGPIHC-APSK 82



 Score = 25.8 bits (55), Expect(2) = 3e-37
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 309 PGQVLWRTIRGMI 347
           P ++ WRT+RGMI
Sbjct: 80  PSKIFWRTVRGMI 92

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>RL13A_CAEEL (Q27389) 60S ribosomal protein L13a|
          Length = 202

 Score = 94.0 bits (232), Expect(2) = 8e-22
 Identities = 42/78 (53%), Positives = 58/78 (74%)
 Frame = +1

Query: 85  GVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRK 264
           G+  + +++D ++H+LGRLASIVAK+LL G +VVV+R EEI +SG   R K+KY+ FLRK
Sbjct: 2   GLSNRAIIIDGKNHLLGRLASIVAKKLLQGDKVVVLRAEEIVISGNFHRSKLKYMSFLRK 61

Query: 265 RMNTKPSHGPIHFRAPAK 318
           R N  P+ G  H+RAP K
Sbjct: 62  RCNINPARGAFHYRAPGK 79



 Score = 27.3 bits (59), Expect(2) = 8e-22
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = +3

Query: 309 PGQVLWRTIRGMI 347
           PG++ WRT+RGM+
Sbjct: 77  PGKIFWRTVRGML 89

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>RL13A_CYAPA (P93099) 60S ribosomal protein L13a|
          Length = 200

 Score =  100 bits (248), Expect = 1e-21
 Identities = 49/74 (66%), Positives = 58/74 (78%)
 Frame = +1

Query: 97  KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNT 276
           K VVVD R H+LGRLA+ +AKELLNGQRVV VR EEI +SG L R K+K+  FL+KRMNT
Sbjct: 4   KVVVVDCRGHLLGRLAATLAKELLNGQRVVAVRTEEINISGSLFRNKLKFHAFLKKRMNT 63

Query: 277 KPSHGPIHFRAPAK 318
            P  GP HFR+PA+
Sbjct: 64  NPRRGPFHFRSPAR 77



 Score = 28.1 bits (61), Expect = 5.6
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 291 PHPLPRPGQVLWRTIRGMI 347
           P     P ++LWRTIRGMI
Sbjct: 69  PFHFRSPARILWRTIRGMI 87

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>RL13A_RAT (P35427) 60S ribosomal protein L13a|
          Length = 202

 Score =  100 bits (248), Expect = 1e-21
 Identities = 47/72 (65%), Positives = 59/72 (81%)
 Frame = +1

Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 6   LVLDGRSHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65

Query: 283 SHGPIHFRAPAK 318
           S GP HFRAP++
Sbjct: 66  SRGPYHFRAPSR 77

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>RL13A_PIG (Q95307) 60S ribosomal protein L13a (Fragment)|
          Length = 137

 Score = 99.8 bits (247), Expect = 2e-21
 Identities = 47/72 (65%), Positives = 59/72 (81%)
 Frame = +1

Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 3   LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 62

Query: 283 SHGPIHFRAPAK 318
           S GP HFRAP++
Sbjct: 63  SRGPYHFRAPSR 74

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>RL13A_PONPY (Q5RA38) 60S ribosomal protein L13a|
          Length = 202

 Score = 99.8 bits (247), Expect = 2e-21
 Identities = 47/72 (65%), Positives = 59/72 (81%)
 Frame = +1

Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 6   LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTSP 65

Query: 283 SHGPIHFRAPAK 318
           S GP HFRAP++
Sbjct: 66  SRGPYHFRAPSR 77

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>RL13A_MOUSE (P19253) 60S ribosomal protein L13a (Transplantation antigen P198)|
           (Tum-P198 antigen)
          Length = 202

 Score = 99.8 bits (247), Expect = 2e-21
 Identities = 47/72 (65%), Positives = 59/72 (81%)
 Frame = +1

Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 6   LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65

Query: 283 SHGPIHFRAPAK 318
           S GP HFRAP++
Sbjct: 66  SRGPYHFRAPSR 77

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>RL13A_MACFA (Q4R8Z2) 60S ribosomal protein L13a|
          Length = 202

 Score = 99.8 bits (247), Expect = 2e-21
 Identities = 47/72 (65%), Positives = 59/72 (81%)
 Frame = +1

Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 6   LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65

Query: 283 SHGPIHFRAPAK 318
           S GP HFRAP++
Sbjct: 66  SRGPYHFRAPSR 77

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>RL13A_HUMAN (P40429) 60S ribosomal protein L13a (23 kDa highly basic protein)|
          Length = 202

 Score = 99.8 bits (247), Expect = 2e-21
 Identities = 47/72 (65%), Positives = 59/72 (81%)
 Frame = +1

Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 6   LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65

Query: 283 SHGPIHFRAPAK 318
           S GP HFRAP++
Sbjct: 66  SRGPYHFRAPSR 77

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>RL13A_BOVIN (Q3SZ90) 60S ribosomal protein L13a|
          Length = 202

 Score = 99.8 bits (247), Expect = 2e-21
 Identities = 47/72 (65%), Positives = 59/72 (81%)
 Frame = +1

Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282
           +V+D R H+LGRLA+IVAK++L G++VVVVRCE I +SG   R K+KYL FLRKRMNT P
Sbjct: 6   LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 65

Query: 283 SHGPIHFRAPAK 318
           S GP HFRAP++
Sbjct: 66  SRGPYHFRAPSR 77

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>RL13A_SPOFR (Q962U0) 60S ribosomal protein L13A|
          Length = 204

 Score = 99.0 bits (245), Expect = 3e-21
 Identities = 44/79 (55%), Positives = 59/79 (74%)
 Frame = +1

Query: 82  SGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLR 261
           +G   K +V+D R H+LGRLA+++AK LL G +VVVVRCE+I +SG   R K+K++ FLR
Sbjct: 2   TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLR 61

Query: 262 KRMNTKPSHGPIHFRAPAK 318
           KR N  P+ GP HFRAP+K
Sbjct: 62  KRCNVNPARGPFHFRAPSK 80

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>RL13A_CHOPR (Q8MUR4) 60S ribosomal protein L13A|
          Length = 204

 Score = 98.2 bits (243), Expect = 4e-21
 Identities = 43/79 (54%), Positives = 59/79 (74%)
 Frame = +1

Query: 82  SGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLR 261
           +G   K +V+D R H+LGRLA+++AK LL G +VVVVRCE++ +SG   R K+K++ FLR
Sbjct: 2   TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQLNISGNFFRNKLKFMSFLR 61

Query: 262 KRMNTKPSHGPIHFRAPAK 318
           KR N  P+ GP HFRAP+K
Sbjct: 62  KRCNVNPARGPFHFRAPSK 80

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>RL13A_DROME (Q9VNE9) 60S ribosomal protein L13A|
          Length = 205

 Score = 96.3 bits (238), Expect = 2e-20
 Identities = 44/79 (55%), Positives = 59/79 (74%)
 Frame = +1

Query: 82  SGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLR 261
           +G+  + VV+D R H+LGRLAS+VAK LL G +V VVRCEE+ +SG   R K+K+L +LR
Sbjct: 2   TGLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLR 61

Query: 262 KRMNTKPSHGPIHFRAPAK 318
           KR N  P+ GP HFRAP++
Sbjct: 62  KRCNVNPARGPFHFRAPSR 80

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>RL16B_SCHPO (O42991) 60S ribosomal protein L16-B|
          Length = 197

 Score = 95.1 bits (235), Expect = 4e-20
 Identities = 45/74 (60%), Positives = 57/74 (77%)
 Frame = +1

Query: 97  KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNT 276
           K VV+DA+ H+LGRLAS+VAK+LL GQ+VVVVRCEE+ +SG   R K+KYL +LRK    
Sbjct: 6   KVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRY 65

Query: 277 KPSHGPIHFRAPAK 318
            PS G  HFRAP++
Sbjct: 66  NPSRGAFHFRAPSR 79

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>RL16A_SCHPO (O42848) 60S ribosomal protein L16-A|
          Length = 197

 Score = 95.1 bits (235), Expect = 4e-20
 Identities = 45/74 (60%), Positives = 57/74 (77%)
 Frame = +1

Query: 97  KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNT 276
           K VV+DA+ H+LGRLAS+VAK+LL GQ+VVVVRCEE+ +SG   R K+KYL +LRK    
Sbjct: 6   KVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRY 65

Query: 277 KPSHGPIHFRAPAK 318
            PS G  HFRAP++
Sbjct: 66  NPSRGAFHFRAPSR 79

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>RL16C_SCHPO (O43004) 60S ribosomal protein L16-C|
          Length = 197

 Score = 92.0 bits (227), Expect = 3e-19
 Identities = 43/74 (58%), Positives = 56/74 (75%)
 Frame = +1

Query: 97  KRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNT 276
           K V++DA+ H++GRLAS VAK+LL GQ+VVVVRCEE+ +SG   R K+KYL +LRK    
Sbjct: 6   KLVIIDAKGHLMGRLASTVAKQLLAGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRY 65

Query: 277 KPSHGPIHFRAPAK 318
            PS G  HFRAP++
Sbjct: 66  NPSRGAFHFRAPSR 79

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>RL13A_SALTR (Q91487) 60S ribosomal protein L13a (Transplantation antigen P198|
           homolog) (Fragment)
          Length = 189

 Score = 89.7 bits (221), Expect = 2e-18
 Identities = 43/64 (67%), Positives = 51/64 (79%)
 Frame = +1

Query: 127 MLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFR 306
           +LGRLA+IVA E+L G +VVVVRCE I +SG   R K+KYL FLRKRMNT PS GP HFR
Sbjct: 1   LLGRLAAIVANEVLLGHKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFR 60

Query: 307 APAK 318
           AP++
Sbjct: 61  APSR 64

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>RL16_NEUCR (Q9P720) 60S ribosomal protein L16|
          Length = 202

 Score = 87.0 bits (214), Expect = 1e-17
 Identities = 42/73 (57%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
 Frame = +1

Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282
           VV+D + H+LGRLASIVAK+LLNGQ++VVVRCE + +SG   R K+KY  +LRK     P
Sbjct: 8   VVIDGKGHLLGRLASIVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHSYLRKMTRYNP 67

Query: 283 SH-GPIHFRAPAK 318
           +  GP HFRAP++
Sbjct: 68  TRGGPFHFRAPSR 80

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>RL16A_YEAST (P26784) 60S ribosomal protein L16-A (L13A) (RP22)|
          Length = 198

 Score = 86.3 bits (212), Expect = 2e-17
 Identities = 40/72 (55%), Positives = 54/72 (75%)
 Frame = +1

Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282
           VV+D + H++GRLAS+VAK+LLNGQ++VVVR EE+ +SG   R K+KY  FLRK      
Sbjct: 6   VVIDGKGHLVGRLASVVAKQLLNGQKIVVVRAEELNISGEFFRNKLKYHDFLRKATAFNK 65

Query: 283 SHGPIHFRAPAK 318
           + GP HFRAP++
Sbjct: 66  TRGPFHFRAPSR 77

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>RL16B_YEAST (P26785) 60S ribosomal protein L16-B (YL15) (RP23)|
          Length = 197

 Score = 84.0 bits (206), Expect = 9e-17
 Identities = 39/72 (54%), Positives = 53/72 (73%)
 Frame = +1

Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282
           VV+DA+ H+LGRLAS +AK++LNGQ++VVVR E + +SG   R K+KY  FLRK      
Sbjct: 5   VVIDAKDHLLGRLASTIAKQVLNGQKIVVVRAEALNISGEFFRNKLKYHDFLRKATAFNK 64

Query: 283 SHGPIHFRAPAK 318
           + GP HFRAP++
Sbjct: 65  TRGPFHFRAPSR 76

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>RL13_ARCFU (O29137) 50S ribosomal protein L13P|
          Length = 156

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 28/71 (39%), Positives = 41/71 (57%)
 Frame = +1

Query: 106 VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPS 285
           V+DA  H+LGRL+S +AK LLNG+R+VVV  E+  ++G    + M + R+  K       
Sbjct: 18  VIDASGHILGRLSSKIAKRLLNGERIVVVNAEKAVITGD---KYMVFERYKEKYDRGSKE 74

Query: 286 HGPIHFRAPAK 318
            GP   R P +
Sbjct: 75  KGPYFPRHPER 85

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>RLSX_METTH (O26146) Fused L13/S9 ribosomal protein [Includes: 50S ribosomal|
           protein L13P; 30S ribosomal protein S9P]
          Length = 282

 Score = 45.8 bits (107), Expect(2) = 1e-05
 Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
 Frame = +1

Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282
           ++++   H+LGRLAS+V+K+LL G+ V+V+  E+I ++G       KY + + +   + P
Sbjct: 4   MIINGEGHILGRLASVVSKKLLEGEEVIVLNAEKILITGSKEWAYGKYKQRIDRASISNP 63

Query: 283 SH-GPIHFRAP 312
              GP + R P
Sbjct: 64  RRMGPKYPRRP 74



 Score = 20.8 bits (42), Expect(2) = 1e-05
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 306 RPGQVLWRTIRGMI 347
           RP  +  RT+RGM+
Sbjct: 73  RPDDIFRRTVRGML 86

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>RL13_AERPE (Q9YB50) 50S ribosomal protein L13P|
          Length = 155

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 23/42 (54%), Positives = 30/42 (71%)
 Frame = +1

Query: 94  AKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSG 219
           A+ +VVD    ++GRLAS+VAK LL G RV VV  E+I +SG
Sbjct: 8   AREIVVDGSGMIMGRLASVVAKLLLAGWRVNVVNAEKIVLSG 49

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>RL13_PYRAB (Q9V196) 50S ribosomal protein L13P|
          Length = 142

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 25/65 (38%), Positives = 36/65 (55%)
 Frame = +1

Query: 106 VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPS 285
           +++A   +LGRLAS VAK LL G+ VV+V  E+  ++G       KY +    R  T P 
Sbjct: 3   IINAEGLILGRLASRVAKMLLEGEEVVIVNAEKAVITGNREVIFSKYKQRTGLRTLTNPR 62

Query: 286 HGPIH 300
            GP +
Sbjct: 63  RGPFY 67

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>RL13_PYRHO (O59300) 50S ribosomal protein L13P|
          Length = 142

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 25/65 (38%), Positives = 36/65 (55%)
 Frame = +1

Query: 106 VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPS 285
           +++A   +LGRLAS VAK LL G+ VV+V  E+  ++G       KY +    R  T P 
Sbjct: 3   IINADGLILGRLASRVAKMLLEGEEVVIVNAEKAVITGNREVIFSKYKQRTGLRTLTNPR 62

Query: 286 HGPIH 300
            GP +
Sbjct: 63  RGPFY 67

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>RL13_HALSA (Q9HQJ3) 50S ribosomal protein L13P|
          Length = 145

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 26/70 (37%), Positives = 36/70 (51%)
 Frame = +1

Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282
           VVVDAR  ++GR+AS VA+  L G RV VV  E+  ++G     +       R R N   
Sbjct: 10  VVVDARDCIMGRVASNVAERALAGDRVAVVNAEQAVITG----TEDDVFSTYRTRANLGS 65

Query: 283 SHGPIHFRAP 312
             GP + + P
Sbjct: 66  DRGPYYPKRP 75

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>RL13_METJA (P54023) 50S ribosomal protein L13P|
          Length = 137

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 18/38 (47%), Positives = 27/38 (71%)
 Frame = +1

Query: 106 VVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSG 219
           V+DA   +LGRLAS VAK +L G+ +V+V  E + ++G
Sbjct: 3   VIDAEGAILGRLASEVAKRVLRGEEIVIVNAEMVVITG 40

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>RL13_HALMA (P29198) 50S ribosomal protein L13P (Hmal13)|
          Length = 145

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 24/70 (34%), Positives = 40/70 (57%)
 Frame = +1

Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKP 282
           V+VDAR  ++GR+AS VA++ L+G+ V VV  E   ++G   +   KY     KR++   
Sbjct: 10  VIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITGREEQIVEKY----EKRVDIGN 65

Query: 283 SHGPIHFRAP 312
            +G  + + P
Sbjct: 66  DNGYFYPKRP 75

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>RL13_SULAC (P39473) 50S ribosomal protein L13P|
          Length = 148

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 17/39 (43%), Positives = 29/39 (74%)
 Frame = +1

Query: 103 VVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSG 219
           V+VDA + +LGR+++ +AK L +G++V VV  E+  +SG
Sbjct: 8   VIVDATNQILGRMSTHIAKLLKSGKKVYVVNAEKAIISG 46

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>RL13_THEMA (Q9X1G5) 50S ribosomal protein L13|
          Length = 149

 Score = 33.9 bits (76), Expect = 0.10
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
 Frame = +1

Query: 70  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 213
           M+    V  K  VVDA   +LGRLA+ +AK L+             G  V+VV  +++ +
Sbjct: 12  MIKPEEVERKWYVVDASGKVLGRLATRIAKILMGKHKPNYTPHVDTGDYVIVVNADKVVL 71

Query: 214 SGGLVRQKMKY 246
           +G  + QK+ Y
Sbjct: 72  TGKKLDQKVYY 82

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>RL13_MYCLE (P38014) 50S ribosomal protein L13|
          Length = 147

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 12/59 (20%)
 Frame = +1

Query: 106 VVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKY 246
           V+DA   +LGRLA++ A  L              G  V+V+  +++ +SG  V+ KM Y
Sbjct: 17  VIDATDVVLGRLAAVAATLLRGKHKPTFAPNVDGGDFVIVINADKVAISGDKVQHKMVY 75

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>RL13_AQUAE (O67722) 50S ribosomal protein L13|
          Length = 144

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 12/59 (20%)
 Frame = +1

Query: 106 VVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVRQKMKY 246
           VVDA    LGRLAS +AK L              G  V+V+  E+I ++G  + QK  Y
Sbjct: 17  VVDATGKTLGRLASEIAKILRGKHKPYYQPDVDCGDFVIVINAEKIRVTGKKLEQKKYY 75

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>RL13_STAS1 (Q49ZD6) 50S ribosomal protein L13|
          Length = 145

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 12/71 (16%)
 Frame = +1

Query: 70  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 213
           M + S +  K  V+DA    LGRL+S VA  L              G  V+V+   +I  
Sbjct: 6   MANESNIERKWYVIDAEGKTLGRLSSEVAAILRGKNKVTYTPHVDTGDYVIVINASKIHF 65

Query: 214 SGGLVRQKMKY 246
           +G   R KM Y
Sbjct: 66  TGNKERDKMYY 76

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>RL13_BACSU (P70974) 50S ribosomal protein L13|
          Length = 145

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
 Frame = +1

Query: 70  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 213
           M + S +  K +VVDA    LGRL+S VA  L              G  V+++  E+I +
Sbjct: 6   MANASTIERKCLVVDAAGKTLGRLSSEVAAILRGKHKPTYTPHVDTGDHVIIINAEKIEL 65

Query: 214 SGGLVRQKMKY 246
           +G  +  K+ Y
Sbjct: 66  TGKKLTDKIYY 76

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>NAT6_MOUSE (Q9R123) N-acetyltransferase 6 (EC 2.3.1.-) (Fus-2 protein) (Fusion|
           2 protein)
          Length = 314

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +3

Query: 3   IPPPPPELQTLVAAPPP 53
           +PPPPP  Q+L A+PPP
Sbjct: 269 LPPPPPLPQSLTASPPP 285

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>CAPU_DROME (Q24120) Protein cappuccino|
          Length = 1059

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +3

Query: 6   PPPPPELQTLVAAPPP 53
           PPPPP L   VA PPP
Sbjct: 488 PPPPPPLHAFVAPPPP 503



 Score = 28.1 bits (61), Expect = 5.6
 Identities = 16/58 (27%), Positives = 22/58 (37%)
 Frame = -3

Query: 221 PPDMQISSQRTTTTRCPLSSSLATIDARRPSMWWRASTTTRLAHTPEPDTISPLTWRR 48
           PP M  S  +TT +  PL              W+  + T R +    P  + PL W R
Sbjct: 552 PPPMSASPSKTTISPAPLPDPAE-------GNWFHRTNTMRKSAVNPPKPMRPLYWTR 602

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>RL13_STRCO (Q53874) 50S ribosomal protein L13|
          Length = 147

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 12/59 (20%)
 Frame = +1

Query: 106 VVDARHHMLGRLAS------------IVAKELLNGQRVVVVRCEEICMSGGLVRQKMKY 246
           V+DA+  +LGRLA+            I A  +  G  V+++  +++ +SG    QKM Y
Sbjct: 17  VIDAQDVVLGRLATTAASILRGKHKPIYAPHVDTGDFVIIINADKVHLSGNKRTQKMAY 75

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>P53_CHICK (P10360) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 367

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +3

Query: 6  PPPPPELQTLVAAPPP 53
          PPPPP L    AAPPP
Sbjct: 52 PPPPPPLPLAAAAPPP 67

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>VPAP_HCMVA (P16790) DNA polymerase processivity factor (Polymerase accessory|
           protein) (PAP) (ICP36 protein)
          Length = 433

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -1

Query: 52  GGGAATRVWSSGGGGG 5
           GGG+ TR  SSGGGGG
Sbjct: 345 GGGSGTRKMSSGGGGG 360

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>TSP4_HUMAN (P35443) Thrombospondin-4 precursor|
          Length = 961

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +1

Query: 223 LVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKSSGAPSA 339
           L+RQ++K   FLR  +    + GP+ F++P  S+  P A
Sbjct: 240 LLRQQVKETSFLRNTIAECQACGPLKFQSPTPSTVVPPA 278

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>PTPA1_CANAL (Q5ADP9) Serine/threonine-protein phosphatase 2A activator 1 (EC|
           5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-1)
           (PPIase PTPA-1) (Rotamase PTPA-1) (Phosphotyrosyl
           phosphatase activator 1)
          Length = 424

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -3

Query: 224 RPPDMQISSQRTTTTRCPLSSSLATIDARRPSMWWRASTT 105
           +PP+  ++S  TTTT   +SSS + I    P+ W   +TT
Sbjct: 371 KPPETTLNSTTTTTTTTKVSSSTSKIPF-TPAPWANTTTT 409

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>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)|
          Length = 5179

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = -3

Query: 227  TRPPDMQISSQRTTTTRCPLSSSLATID-ARRPSMWWRASTTTRLAHTPEPDTISPLT 57
            T PP     S  TTTT  P + +  T      PS     +TT     TP P T +P+T
Sbjct: 1570 TTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPIT 1627



 Score = 28.5 bits (62), Expect = 4.3
 Identities = 18/57 (31%), Positives = 23/57 (40%)
 Frame = -3

Query: 227  TRPPDMQISSQRTTTTRCPLSSSLATIDARRPSMWWRASTTTRLAHTPEPDTISPLT 57
            T PP     S   TT   P +S+        PS     +TT     TP P T +P+T
Sbjct: 1492 TTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPIT 1548

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>RL13_DEIRA (Q9RXY1) 50S ribosomal protein L13|
          Length = 174

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 12/63 (19%)
 Frame = +1

Query: 103 VVVDARHHMLGRLASIVAK------------ELLNGQRVVVVRCEEICMSGGLVRQKMKY 246
           VVVDA    LGRLA+++A              ++ G  VVV+   ++ ++G  +  K+ Y
Sbjct: 42  VVVDASGVPLGRLATLIASRIRGKHRPDFTPNMIQGDFVVVINAAQVALTGKKLDDKV-Y 100

Query: 247 LRF 255
            R+
Sbjct: 101 TRY 103

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>RL13_CHLPN (Q9Z8T7) 50S ribosomal protein L13|
          Length = 149

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 12/69 (17%)
 Frame = +1

Query: 70  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICM 213
           +V  S       VVDA    LGRL+S VAK L              G  V+V+  E++ +
Sbjct: 11  IVKSSETTKSWYVVDAAGKTLGRLSSEVAKILRGKHKVTYTPHVAMGDGVIVINAEKVRL 70

Query: 214 SGGLVRQKM 240
           +G    QK+
Sbjct: 71  TGAKKGQKI 79

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>RL13A_SPIOL (P82454) 60S ribosomal protein L13a (Fragment)|
          Length = 15

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +1

Query: 73  VSGSGVCAKRVVVDA 117
           VSGSG+ AKRVVVDA
Sbjct: 1   VSGSGIMAKRVVVDA 15

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>RL13_STAEQ (Q5HM31) 50S ribosomal protein L13|
          Length = 145

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 12/71 (16%)
 Frame = +1

Query: 70  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 213
           M + S +  K  V+DA    LGRL+S VA  L              G  V+++   +I  
Sbjct: 6   MANESNIERKWYVIDAEGQTLGRLSSEVAAILRGKNKVTYTPHVDTGDYVIIINASKIEF 65

Query: 214 SGGLVRQKMKY 246
           +G   + KM Y
Sbjct: 66  TGNKEQDKMYY 76

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>ECT2_MOUSE (Q07139) ECT2 protein (Epithelial cell-transforming sequence 2|
           oncogene)
          Length = 738

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
 Frame = -3

Query: 260 RRKRRYFIFWRT--RPPDMQISSQRTTTTRCPLSSSLATIDARRPSMWWRASTTTRLAHT 87
           ++  R F F +T  R   M +SS  ++  R P SS    +         R S+T+ LA  
Sbjct: 660 KKVTRAFSFSKTPKRALRMALSSSHSSEGRSPPSSGKLAVS--------RLSSTSSLAGI 711

Query: 86  PEPDTISPLTWRRRRSY 36
           P P  +S  ++  RRS+
Sbjct: 712 PSPSLVSLPSFFERRSH 728

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>DIAP1_MOUSE (O08808) Protein diaphanous homolog 1 (Diaphanous-related formin-1)|
           (DRF1) (mDIA1) (p140mDIA)
          Length = 1255

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +3

Query: 3   IPPPPPELQTLVAAPPP 53
           IPPPPP L   V  PPP
Sbjct: 683 IPPPPPPLPGSVGVPPP 699

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>RL13_STACA (Q00990) 50S ribosomal protein L13|
          Length = 145

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 12/71 (16%)
 Frame = +1

Query: 70  MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICM 213
           M + S +  K  V+DA    LGRL+S VA  L             +G  V+++   +I M
Sbjct: 6   MANESNIERKWYVIDAAGQTLGRLSSEVASILRGKHKATYTPHVDSGDYVIIINAGQIEM 65

Query: 214 SGGLVRQKMKY 246
           +G     K+ Y
Sbjct: 66  TGKKASDKVYY 76

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>COQ6_CAEEL (O01884) Probable ubiquinone biosynthesis monooxgenase coq-6 (EC|
           1.14.13.-)
          Length = 451

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3

Query: 161 SLATIDARRPSMWWRASTTTRLAHTPEPDTISPLTW 54
           ++ T + +  + W R +T   +A  P  DT+S LTW
Sbjct: 215 NIETANGKNETAWQRFTTLGPVALLPLSDTVSGLTW 250

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>RL13_RHOPA (Q6N651) 50S ribosomal protein L13 (RRP-L13)|
          Length = 154

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 12/65 (18%)
 Frame = +1

Query: 88  VCAKRVVVDARHHMLGRLASIVAKELLN------------GQRVVVVRCEEICMSGGLVR 231
           V  K V++DA   ++GRLA++VA  L              G  V+++   ++ ++G    
Sbjct: 11  VTKKWVIIDATGLVVGRLATLVAMRLRGKHLPTYTPHVDCGDNVIIINASKVVLTGRKRD 70

Query: 232 QKMKY 246
            K+ Y
Sbjct: 71  NKVYY 75

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>SGS3_DROSI (P13729) Salivary glue protein Sgs-3 precursor|
          Length = 217

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 7/52 (13%)
 Frame = -3

Query: 218 PDMQISSQRTTTTR-------CPLSSSLATIDARRPSMWWRASTTTRLAHTP 84
           P  + +S  TTTTR       C  +S+  T     P+   + STTT   H P
Sbjct: 71  PTCKSTSTTTTTTRAPPTKPTCKSTSTTTTTTRAPPTTTCKTSTTTTTTHKP 122

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>NLP32_CAEEL (Q09982) Putative neuropeptide-like protein 32 precursor [Contains:|
           YGGWG-amide; GGW-amide; GG-amide; GYG-amide;
           GGGWG-amide; GGGW-amide; GGG-amide; GFYGG-amide;
           GW-amide]
          Length = 105

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 316 WPGRGSGWGRG 284
           W GRG GWGRG
Sbjct: 79  WGGRGGGWGRG 89

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>DIAP2_HUMAN (O60879) Protein diaphanous homolog 2 (Diaphanous-related formin-2)|
           (DRF2)
          Length = 1101

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 3   IPPPPPELQTLVAAPPP 53
           +PPPPP L  ++  PPP
Sbjct: 577 LPPPPPPLPGMMGIPPP 593

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>LATS1_MOUSE (Q8BYR2) Serine/threonine-protein kinase LATS1 (EC 2.7.11.1) (Large|
           tumor suppressor homolog 1) (WARTS protein kinase)
          Length = 1129

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +3

Query: 6   PPPPPELQTLVAAPPP 53
           PPPPP+++++   PPP
Sbjct: 236 PPPPPQVRSVTPPPPP 251

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>LATS1_HUMAN (O95835) Serine/threonine-protein kinase LATS1 (EC 2.7.11.1) (Large|
           tumor suppressor homolog 1) (WARTS protein kinase)
           (h-warts)
          Length = 1130

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +3

Query: 6   PPPPPELQTLVAAPPP 53
           PPPPP+++++   PPP
Sbjct: 236 PPPPPQVRSVTPPPPP 251

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>WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 6   PPPPPELQTLVAAPPP 53
           PPPPP  +  VA PPP
Sbjct: 322 PPPPPPSRPSVAVPPP 337

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>PDXH_NOCFA (Q5Z236) Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP|
           oxidase) (PNPOx)
          Length = 225

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
 Frame = -3

Query: 239 IFWRTRPPDMQISS-----QRTTTTRCPLSSSLATIDAR 138
           ++WR+RP D Q+ +      R   +R  L  +LA + AR
Sbjct: 134 VYWRSRPRDSQLGAWASQQSRPIDSRAALDRALAEVTAR 172

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>TSP4_MOUSE (Q9Z1T2) Thrombospondin-4 precursor|
          Length = 963

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +1

Query: 223 LVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKSSGAPSA 339
           L+RQ++K   FLR  +    + GP+ F++P  ++  P A
Sbjct: 242 LLRQQVKETSFLRNTIAECQACGPLSFQSPTPNTLVPIA 280

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>THID_SALTY (P55882) Phosphomethylpyrimidine kinase (EC 2.7.4.7) (HMP-phosphate|
           kinase) (HMP-P kinase)
          Length = 266

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 9/52 (17%)
 Frame = +1

Query: 163 LLNGQRVVVVRCEEICMSGGLVR--QKMKYL-------RFLRKRMNTKPSHG 291
           L  G+ ++ + CE + M GG +   Q   +L       RF   R+NTK +HG
Sbjct: 159 LAQGRALLAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRVNTKNTHG 210

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>CBX4_HUMAN (O00257) Chromobox protein homolog 4 (Polycomb 2 homolog) (Pc2)|
           (hPc2)
          Length = 558

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = +1

Query: 67  EMVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEI 207
           E V+G+G+  K  +V  ++   GR+  +++K + NG + V ++  E+
Sbjct: 237 EAVTGNGIGGKMKIVKNKNKN-GRIVIVMSKYMENGMQAVKIKSGEV 282

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>RK13_SPIOL (P12629) 50S ribosomal protein L13, chloroplast precursor (CL13)|
          Length = 250

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 12/60 (20%)
 Frame = +1

Query: 97  KRVVVDARHHMLGRLASIVA-----KELLN-------GQRVVVVRCEEICMSGGLVRQKM 240
           K  VVDA   +LGR+AS +A     K L +       G  V+VV  +++ +SG    QK+
Sbjct: 113 KWYVVDATDLILGRMASTIAIHIRGKNLASYTPSVDMGAFVIVVNADKVAVSGKKRTQKL 172

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>VGLC_EHV1D (P68325) Glycoprotein C precursor (Glycoprotein 13)|
          Length = 468

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -3

Query: 242 FIFWRTRPPDMQISSQRTTTTRCPLSSSLATIDARRP 132
           F+ W        + SQ  TT  CP  S L  + +RRP
Sbjct: 351 FVSWSVNDHLPGVPSQDMTTGVCPSHSGLVNMQSRRP 387

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>VGLC_EHV1B (Q6S6Q5) Glycoprotein C precursor (Glycoprotein 13)|
          Length = 468

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -3

Query: 242 FIFWRTRPPDMQISSQRTTTTRCPLSSSLATIDARRP 132
           F+ W        + SQ  TT  CP  S L  + +RRP
Sbjct: 351 FVSWSVNDHLPGVPSQDMTTGVCPSHSGLVNMQSRRP 387

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>DIAP2_MOUSE (O70566) Protein diaphanous homolog 2 (Diaphanous-related formin-2)|
           (DRF2) (mDia3)
          Length = 1098

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 6   PPPPPELQTLVAAPPP 53
           PPPPP L  +V  PPP
Sbjct: 565 PPPPPPLPGVVPPPPP 580

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>TSP4_RAT (P49744) Thrombospondin-4 precursor|
          Length = 980

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +1

Query: 223 LVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKSSGAPSA 339
           L+RQ++K   FLR  +    + GP+ F++P  ++  P A
Sbjct: 258 LLRQQVKETSFLRNTIAECQACGPLSFQSPTPNTLVPIA 296


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,462,074
Number of Sequences: 219361
Number of extensions: 669460
Number of successful extensions: 4577
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 3258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4441
length of database: 80,573,946
effective HSP length: 92
effective length of database: 60,392,734
effective search space used: 1449425616
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result