>PNAA_PRUDU (P81898) Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase|
           A (EC 3.5.1.52) (PNGase A) (Glycopeptide N-glycosidase)
           (N-glycanase) [Contains:
           Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine
           amidase A light chain (PNGase A small chain)
          Length = 571

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
 Frame = +1

Query: 175 TTFFEVNRPLHPPRGSSGPCSTLLLSQSFALTLNKPPVTAAYSPPS-CLSGAGDVSLAVL 351
           T FFEV +P+  P+  + PCS L+L   FA T  + PV A Y+PPS C S     S  VL
Sbjct: 11  TVFFEVTKPIEVPK--TKPCSQLILQHDFAYTYGQAPVFANYTPPSDCPSQT--FSTIVL 66

Query: 352 EWRA 363
           EW+A
Sbjct: 67  EWKA 70

>SYA_DEIRA (Q9RS27) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 890

 Score = 33.9 bits (76), Expect = 0.099
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +1

Query: 130 TVEAALPARHLAK--AKTTFFEVNRPLHPPRGSSGPCSTL 243
           T +  LPA H+ +  A   F+  N PL  P G  GPCS +
Sbjct: 145 TQDIGLPAEHIHRFDADENFWPANAPLEGPNGPCGPCSEI 184

>BTBD7_HUMAN (Q9P203) BTB/POZ domain-containing protein 7|
          Length = 1132

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
 Frame = +1

Query: 205 HPPRGSSGPCSTLLLSQSFALTLNKPPV---TAAYSPPSCLSGAG 330
           HP R  S PC+  L     A     PPV   +   +PP C S AG
Sbjct: 788 HPSRSFSYPCNHSLFHSRTAPKAGPPPVYLPSVKAAPPDCTSTAG 832

>PP14D_HUMAN (Q9NXH3) Protein phosphatase 1 regulatory subunit 14D|
           (Gastrointestinal and brain-specific PP1-inhibitory
           protein 1) (GBPI-1)
          Length = 145

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 22/66 (33%), Positives = 30/66 (45%)
 Frame = -3

Query: 353 SRTASETSPAPLRQDGGE*AAVTGGLLRVSAKDWERRSVEQGPELPRGGCSGRLTSKKVV 174
           S  AS TSP+P  ++  +      G  R S+ D E +S     ++PR     RLT K   
Sbjct: 4   SSPASCTSPSPDGENPCKKVHWASGRRRTSSTDSESKSHPDSSKIPRSRRPSRLTVKYDR 63

Query: 173 LALARW 156
             L RW
Sbjct: 64  GQLQRW 69

>ATG1_COLLN (P87248) Serine/threonine-protein kinase ATG1 (EC 2.7.11.1)|
           (Autophagy-related protein 1) (Colletotrichum
           lindemuthianum kinase 1)
          Length = 675

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +1

Query: 190 VNRPLHPPRGSSGPCSTLLLSQSFALTLNKPPVTAAYSPPS 312
           + RP  P   +S P     LS +   +LN+PP+ A+ SPP+
Sbjct: 410 IRRPPMPQPSTSAPSRPHRLSNA---SLNRPPIRASASPPT 447

>VGLL1_MOUSE (Q99NC0) Transcription cofactor vestigial-like protein 1 (Vgl-1)|
           (Vestigial-related factor)
          Length = 307

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/50 (32%), Positives = 20/50 (40%)
 Frame = +1

Query: 193 NRPLHPPRGSSGPCSTLLLSQSFALTLNKPPVTAAYSPPSCLSGAGDVSL 342
           N PL P    +  CS   ++ S    +N PP    Y    C  GA   SL
Sbjct: 243 NHPLEPAAREN--CSPAKIAGSTGSLMNLPPYPVHYKKKICARGAASASL 290

>SKEL_DROME (Q9GPJ1) Protein skeletor|
          Length = 743

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = +1

Query: 208 PPRGSSGPCSTLLLSQSFALTLNKPPVTAAYSPPSCLSGAGDVSLAVL 351
           P   SS P   +LL ++ A TLN  P  +AY  PS    + ++ L +L
Sbjct: 94  PTEISSRP--EILLGETHAHTLNASPSASAYPSPSATLPSANLKLPIL 139

>LEPA_CHRVO (Q7NWC7) GTP-binding protein lepA|
          Length = 597

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
 Frame = +1

Query: 88  ARPHRLGLSAEDVATVEAALPARHLAKA----KTTFFEVNRPLHPPRGS-SGPCSTLLLS 252
           A P R+    ED+  +EA    R  AK+    +    EV   + PP+G   GP   L++ 
Sbjct: 138 ADPERISQEIEDIIGIEAVEAVRASAKSGIGIEDILEEVVNKIPPPKGDPDGPLKALIVD 197

Query: 253 QSF 261
             F
Sbjct: 198 SWF 200

>PHEA_LACLC (P43909) Prephenate dehydratase (EC 4.2.1.51) (PDT)|
          Length = 279

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +1

Query: 253 QSFALTLNKPPVTAAYSPPSCLSGAGDVSLAVLEWR 360
           QSF L   K  VT A + P  L GA   +++V  WR
Sbjct: 181 QSFDLNQTKDKVTLALTLPDNLPGALHKAISVFAWR 216

>PAK4_MOUSE (Q8BTW9) Serine/threonine-protein kinase PAK 4 (EC 2.7.11.1)|
           (p21-activated kinase 4) (PAK-4)
          Length = 593

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 205 HPPRGSSGPCSTLLLSQSFALTLNKPPVTAAYSPPSCLSGA 327
           HPPRG+ G   T+  +   A  L  P  +++  PP+   GA
Sbjct: 215 HPPRGAQGEPHTMAPNGPSATGLAAPQSSSSSRPPTRARGA 255

>PSPN_HUMAN (O60542) Persephin precursor (PSP)|
          Length = 156

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
 Frame = +1

Query: 106 GLSAEDVATVEAALPARHLAKAKTTFFEVNRPL-HPPRGSSGPCSTLLLSQSFALT---- 270
           G  A  V   +    +  +AKA  T+   +RPL    R  SGPC    L+ S A      
Sbjct: 23  GPDARGVPVADGEFSSEQVAKAGGTWLGTHRPLARLRRALSGPCQLWSLTLSVAELGLGY 82

Query: 271 LNKPPVTAAYSPPSCLSGA 327
            ++  V   Y   SC  GA
Sbjct: 83  ASEEKVIFRYCAGSCPRGA 101

>LRC8B_MOUSE (Q5DU41) Leucine-rich repeat-containing protein 8B|
          Length = 791

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +1

Query: 40  LFLCFFTLLAHSHFSVARPHRLGLSAEDVATVEAALPARHL 162
           L  C    + HS FS+   H L L   ++ TVE  +  +HL
Sbjct: 580 LLSCDLERIPHSIFSLNNLHELDLKENNLKTVEEIISFQHL 620

>HSCB_YERPS (Q667Y4) Co-chaperone protein hscB (Hsc20)|
          Length = 174

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = +1

Query: 145 LPARHLAKAK---TTFFEVNRPLHPPRGSSGPCSTLLLSQSFALTLN 276
           LPAR+L       T + E+ R  HP R ++ P    L S   A T+N
Sbjct: 9   LPARYLIDGNQLTTRYQELQRQFHPDRFATQPERERLASMQQAATIN 55

>HSCB_YERPE (Q8ZCS4) Co-chaperone protein hscB (Hsc20)|
          Length = 174

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = +1

Query: 145 LPARHLAKAK---TTFFEVNRPLHPPRGSSGPCSTLLLSQSFALTLN 276
           LPAR+L       T + E+ R  HP R ++ P    L S   A T+N
Sbjct: 9   LPARYLIDGNQLTTRYQELQRQFHPDRFATQPERERLASMQQAATIN 55

>LRC8B_HUMAN (Q6P9F7) Leucine-rich repeat-containing protein 8B (T-cell|
           activation leucine repeat-rich protein)
          Length = 803

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +1

Query: 40  LFLCFFTLLAHSHFSVARPHRLGLSAEDVATVEAALPARHL 162
           L  C    + HS FS+   H L L   ++ TVE  +  +HL
Sbjct: 592 LISCDLERIPHSIFSLNNLHELDLRENNLKTVEEIISFQHL 632

>LRBA_HUMAN (P50851) Lipopolysaccharide-responsive and beige-like anchor protein|
            (CDC4-like protein) (Beige-like protein)
          Length = 2863

 Score = 23.1 bits (48), Expect(2) = 9.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 286  VTAAYSPPSCLSGAGDVSL 342
            V  A  PP+CL   GD+S+
Sbjct: 1695 VDPALLPPACLGALGDLSV 1713



 Score = 22.3 bits (46), Expect(2) = 9.9
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 187  EVNRPLHPPRGSSGPCSTLLLSQSFALTLNKPPVT 291
            EV     PP  S+GP +   +  + +L +NK P T
Sbjct: 1620 EVTPHTAPPGVSAGPDAISEVLSTLSLEVNKSPET 1654


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,768,897
Number of Sequences: 219361
Number of extensions: 450759
Number of successful extensions: 1859
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1859
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)