>IF34_SCHPO (P78795) Probable eukaryotic translation initiation factor 3|
           RNA-binding subunit (eIF-3 RNA-binding subunit) (eIF3
           p33) (Translation initiation factor eIF3, p33 subunit)
          Length = 282

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
 Frame = +1

Query: 178 PRVVIGPDENGFKKTIEYRFDDDGNXXXXXXXXXXXXXXXXXXXXXXXERRSWGKFGDAA 357
           P +    + +G K  IE+R DD+G                        ER+ W KFG  A
Sbjct: 20  PSIQTFDNPDGTKTMIEFRIDDNGK-KVKVTRVIRKTVITERVQHAVAERKKWKKFGKEA 78

Query: 358 ---SGDDA 372
              SG DA
Sbjct: 79  GKNSGVDA 86


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.134    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,115,518
Number of Sequences: 219361
Number of extensions: 189893
Number of successful extensions: 99
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 99
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)