ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast07g09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ409175.1| Bambusa ventricosa cytochrome P450 mRNA, complete... 54 4e-04
2emb|AJ585989.1| Triticum aestivum partial mRNA for cytochrome P4... 54 4e-04
3emb|AJ585991.1| Triticum aestivum partial mRNA for cytochrome P4... 48 0.022
4emb|AJ585990.1| Triticum aestivum partial mRNA for cytochrome P4... 48 0.022
5emb|AJ585988.1| Triticum aestivum partial mRNA for cytochrome P4... 48 0.022
6ref|XM_538287.2| PREDICTED: Canis familiaris similar to Thyrotro... 44 0.35
7emb|AL365264.13| Human DNA sequence from clone RP11-287H7 on chr... 44 0.35
8ref|XM_463099.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
9gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genom... 42 1.4
10gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 42 1.4
11gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.4
12ref|XM_538275.2| PREDICTED: Canis familiaris similar to solute c... 42 1.4
13gb|AC137921.2| Oryza sativa chromosome 3 BAC OSJNBa0027H16 genom... 42 1.4
14emb|AL627443.6| Human DNA sequence from clone RP11-459F1 on chro... 42 1.4
15tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome 42 1.4
16dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
17gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.4
18emb|X97257.1|PRVULGNS Suid herpesvirus 1 strain Kaplan UL[5,6,7,... 42 1.4
19emb|AJ937764.1| Uncultured Chloroflexi bacterium fosmid clone b1... 42 1.4
20gb|AC129093.34| Mus musculus strain C57BL/6J clone rp23-198m10 m... 40 5.4
21ref|NM_184957.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.4
22ref|NM_184832.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.4
23gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 5.4
24gb|AC102151.8| Mus musculus chromosome 18, clone RP23-312L17, co... 40 5.4
25gb|AC146229.2| Pan troglodytes BAC clone RP43-33B3 from 7, compl... 40 5.4
26gb|AC073141.4| Homo sapiens BAC clone RP11-733D19 from 7, comple... 40 5.4
27gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 5.4
28ref|XM_858780.1| PREDICTED: Canis familiaris similar to DEAH (As... 40 5.4
29ref|XM_858759.1| PREDICTED: Canis familiaris similar to DEAH (As... 40 5.4
30ref|XM_858739.1| PREDICTED: Canis familiaris similar to DEAH (As... 40 5.4
31ref|XM_858718.1| PREDICTED: Canis familiaris similar to DEAH (As... 40 5.4
32ref|XM_858693.1| PREDICTED: Canis familiaris similar to DEAH (As... 40 5.4
33ref|XM_858604.1| PREDICTED: Canis familiaris similar to DEAH (As... 40 5.4
34ref|XM_540916.2| PREDICTED: Canis familiaris similar to neural s... 40 5.4
35ref|XM_570947.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 5.4
36emb|AL360157.12| Human DNA sequence from clone RP11-801I18 on ch... 40 5.4
37emb|AL355306.10| Human DNA sequence from clone RP5-947P14 on chr... 40 5.4
38gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 5.4
39emb|AJ580915.1|SPA580915 Streptomyces parvulus Tu4055 cluster fo... 40 5.4
40gb|AC104976.3| Homo sapiens chromosome 8, clone RP11-191D14, com... 40 5.4
41gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 5.4
42gb|AC018529.12| Homo sapiens, clone RP11-4B16, complete sequence 40 5.4
43gb|AC068394.14| Homo sapiens chromosome 8, clone RP11-340H8, com... 40 5.4
44gb|AY003872.1| Plasmodium vivax YAC 1H14, complete sequence 40 5.4
45gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 5.4
46gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 5.4
47dbj|AK041094.1| Mus musculus adult male aorta and vein cDNA, RIK... 40 5.4
48gb|BC096484.1| Mus musculus cDNA clone IMAGE:5293208 40 5.4
49dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
50gb|AY968215.1| Rubella virus strain RVI/Anhui.CHN/00 structural ... 40 5.4
51gb|AY968213.1| Rubella virus strain RVI/SHANDONG.CHN/00 structur... 40 5.4
52gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genom... 40 5.4
53gb|AC093330.25| Homo sapiens chromosome 18, clone RP11-862L9, co... 40 5.4
54gb|AC016622.5|AC016622 Homo sapiens chromosome 5 clone CTD-2343F... 40 5.4
55emb|AJ583532.1| Triticum aestivum mRNA for cytochrome P450 (CYP9... 40 5.4
56gb|AC008833.5|AC008833 Homo sapiens chromosome 5 clone CTD-2146O... 40 5.4
57dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
58dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
59dbj|AK111441.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
60dbj|AK069017.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
61gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 5.4
62emb|AL691472.6| Mouse DNA sequence from clone RP23-217C12 on chr... 40 5.4
63gb|AC170255.8| Mus musculus chromosome 1, clone RP23-359K18, com... 40 5.4
64gb|AC122127.31| Mus musculus chromosome 1, clone RP24-401K1, com... 40 5.4
65gb|AC171328.2| Mus musculus chromosome 1, clone wi1-817D1, compl... 40 5.4 
>gb|DQ409175.1| Bambusa ventricosa cytochrome P450 mRNA, complete cds
          Length = 1913

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 336 gggaggtgctcaagaagcaggacgagatcttcgcgtcccgccc 378
           ||||||||||||||||||||||||  | ||||| |||||||||
Sbjct: 455 gggaggtgctcaagaagcaggacgccaacttcgtgtcccgccc 497
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>emb|AJ585989.1| Triticum aestivum partial mRNA for cytochrome P450-like protein
          Length = 1515

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 158 ctccctccggggccgtgcccgtggccggtggtagg 192
           ||||| ||||| |||||||||||||||||||||||
Sbjct: 85  ctcccgccgggcccgtgcccgtggccggtggtagg 119
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>emb|AJ585991.1| Triticum aestivum partial mRNA for cytochrome P450-like protein
          Length = 1532

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 158 ctccctccggggccgtgcccgtggccggtggt 189
           ||||| ||||| ||||||||||||||||||||
Sbjct: 85  ctcccaccgggcccgtgcccgtggccggtggt 116
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>emb|AJ585990.1| Triticum aestivum partial mRNA for cytochrome P450-like protein
          Length = 1532

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 158 ctccctccggggccgtgcccgtggccggtggt 189
           ||||| ||||| ||||||||||||||||||||
Sbjct: 85  ctcccaccgggcccgtgcccgtggccggtggt 116
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>emb|AJ585988.1| Triticum aestivum partial mRNA for cytochrome P450-like protein
          Length = 1532

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 158 ctccctccggggccgtgcccgtggccggtggt 189
           ||||| ||||| ||||||||||||||||||||
Sbjct: 85  ctcccaccgggcccgtgcccgtggccggtggt 116
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>ref|XM_538287.2| PREDICTED: Canis familiaris similar to Thyrotropin-releasing
           hormone degrading ectoenzyme (TRH-degrading ectoenzyme)
           (TRH-DE) (TRH-specific aminopeptidase) (Thyroliberinase)
           (Pyroglutamyl-peptidase II) (PAP-II) (LOC481166), mRNA
          Length = 585

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 164 ccggggccgtgcccgtggccgg 185
           ||||||||||||||||||||||
Sbjct: 401 ccggggccgtgcccgtggccgg 422
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>emb|AL365264.13| Human DNA sequence from clone RP11-287H7 on chromosome 1, complete
             sequence
          Length = 16665

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 245   catcaggtgatggagaagatga 266
             ||||||||||||||||||||||
Sbjct: 10261 catcaggtgatggagaagatga 10282
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>ref|XM_463099.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 435

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 331 cgccagggaggtgctcaagaagcaggacg 359
           |||||||||||||||||||| ||| ||||
Sbjct: 54  cgccagggaggtgctcaagacgcacgacg 82
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>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete
              sequence
          Length = 139771

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 331    cgccagggaggtgctcaagaagcaggacg 359
              |||||||||||||||||||| ||| ||||
Sbjct: 116030 cgccagggaggtgctcaagacgcacgacg 116058
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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 276     tcgcctgcttccgcctcggcg 296
               |||||||||||||||||||||
Sbjct: 2434453 tcgcctgcttccgcctcggcg 2434433
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 331      cgccagggaggtgctcaagaagcaggacg 359
                |||||||||||||||||||| ||| ||||
Sbjct: 21771786 cgccagggaggtgctcaagacgcacgacg 21771758



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 332      gccagggaggtgctcaagaagcaggacg 359
                ||||||||||||||||||| ||| ||||
Sbjct: 21931541 gccagggaggtgctcaagacgcacgacg 21931568



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 331      cgccagggaggtgctcaaga 350
                ||||||||||||||||||||
Sbjct: 21891688 cgccagggaggtgctcaaga 21891707
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>ref|XM_538275.2| PREDICTED: Canis familiaris similar to solute carrier family 35,
           member E2 (LOC481154), mRNA
          Length = 798

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 154 ggcgctccctccggggccgtgcccg 178
           ||||||||||||||||||| |||||
Sbjct: 138 ggcgctccctccggggccgagcccg 114
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>gb|AC137921.2| Oryza sativa chromosome 3 BAC OSJNBa0027H16 genomic sequence, complete
              sequence
          Length = 163108

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 331    cgccagggaggtgctcaagaagcaggacg 359
              |||||||||||||||||||| ||| ||||
Sbjct: 160031 cgccagggaggtgctcaagacgcacgacg 160003
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>emb|AL627443.6| Human DNA sequence from clone RP11-459F1 on chromosome 6 Contains a
              glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene,
              a novel gene, the T gene for T, brachyury homolog (mouse)
              and a CpG island, complete sequence
          Length = 164820

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 72     ctctgctcctctccttcttcc 92
              |||||||||||||||||||||
Sbjct: 124764 ctctgctcctctccttcttcc 124784
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>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome
          Length = 143461

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 161   cctccggggccgtgcccgtgg 181
             |||||||||||||||||||||
Sbjct: 83777 cctccggggccgtgcccgtgg 83797
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 331      cgccagggaggtgctcaagaagcaggacg 359
                |||||||||||||||||||| ||| ||||
Sbjct: 21764815 cgccagggaggtgctcaagacgcacgacg 21764787



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 332      gccagggaggtgctcaagaagcaggacg 359
                ||||||||||||||||||| ||| ||||
Sbjct: 21924570 gccagggaggtgctcaagacgcacgacg 21924597



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 331      cgccagggaggtgctcaaga 350
                ||||||||||||||||||||
Sbjct: 21884717 cgccagggaggtgctcaaga 21884736
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 355     ggacgagatcttcgcgtcccgcccg 379
               |||||||||||||||| ||||||||
Sbjct: 3985514 ggacgagatcttcgcgacccgcccg 3985538
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>emb|X97257.1|PRVULGNS Suid herpesvirus 1 strain Kaplan UL[5,6,7,8,8.5,9,10,11,12,13] genes
          Length = 11059

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 161  cctccggggccgtgcccgtgg 181
            |||||||||||||||||||||
Sbjct: 5427 cctccggggccgtgcccgtgg 5447
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>emb|AJ937764.1| Uncultured Chloroflexi bacterium fosmid clone b1dcf1.3.f01
          Length = 33281

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 91    ccatgtggtggtgatggtggc 111
             |||||||||||||||||||||
Sbjct: 30392 ccatgtggtggtgatggtggc 30412
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>gb|AC129093.34| Mus musculus strain C57BL/6J clone rp23-198m10 map 19, complete sequence
          Length = 190697

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    agctcaagttatttaacaag 223
              ||||||||||||||||||||
Sbjct: 157651 agctcaagttatttaacaag 157632
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>ref|NM_184957.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1659

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 332 gccagggaggtgctcaagaagcaggacg 359
           ||||||||||||||||||| ||| ||||
Sbjct: 292 gccagggaggtgctcaagacgcacgacg 319
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>ref|NM_184832.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1539

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 331 cgccagggaggtgctcaaga 350
           ||||||||||||||||||||
Sbjct: 303 cgccagggaggtgctcaaga 322
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>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete
               sequence
          Length = 1507550

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 95      gtggtggtgatggtggccgt 114
               ||||||||||||||||||||
Sbjct: 1069970 gtggtggtgatggtggccgt 1069951
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>gb|AC102151.8| Mus musculus chromosome 18, clone RP23-312L17, complete sequence
          Length = 175398

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 73    tctgctcctctccttcttccatgtggtg 100
             |||||| ||||||||||| |||||||||
Sbjct: 82764 tctgcttctctccttcttgcatgtggtg 82737
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>gb|AC146229.2| Pan troglodytes BAC clone RP43-33B3 from 7, complete sequence
          Length = 186222

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    tctgctcctctccttcttcc 92
             ||||||||||||||||||||
Sbjct: 98935 tctgctcctctccttcttcc 98916
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>gb|AC073141.4| Homo sapiens BAC clone RP11-733D19 from 7, complete sequence
          Length = 151073

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    tctgctcctctccttcttcc 92
             ||||||||||||||||||||
Sbjct: 98148 tctgctcctctccttcttcc 98129
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 352     gcaggacgagatcttcgcgt 371
               ||||||||||||||||||||
Sbjct: 2716144 gcaggacgagatcttcgcgt 2716125
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>ref|XM_858780.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box
           polypeptide 30 isoform 3, transcript variant 10
           (LOC476639), mRNA
          Length = 3682

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 279 cctgcttccgcctcggcggcgtcc 302
           ||||| ||||||||||||||||||
Sbjct: 167 cctgcctccgcctcggcggcgtcc 144
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>ref|XM_858759.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box
           polypeptide 30 isoform 3, transcript variant 9
           (LOC476639), mRNA
          Length = 3769

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 279 cctgcttccgcctcggcggcgtcc 302
           ||||| ||||||||||||||||||
Sbjct: 167 cctgcctccgcctcggcggcgtcc 144
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>ref|XM_858739.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box
           polypeptide 30 isoform 3, transcript variant 8
           (LOC476639), mRNA
          Length = 2394

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 279 cctgcttccgcctcggcggcgtcc 302
           ||||| ||||||||||||||||||
Sbjct: 167 cctgcctccgcctcggcggcgtcc 144
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>ref|XM_858718.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box
           polypeptide 30 isoform 3, transcript variant 7
           (LOC476639), mRNA
          Length = 1562

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 279 cctgcttccgcctcggcggcgtcc 302
           ||||| ||||||||||||||||||
Sbjct: 208 cctgcctccgcctcggcggcgtcc 185
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>ref|XM_858693.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box
           polypeptide 30 isoform 3, transcript variant 6
           (LOC476639), mRNA
          Length = 991

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 279 cctgcttccgcctcggcggcgtcc 302
           ||||| ||||||||||||||||||
Sbjct: 167 cctgcctccgcctcggcggcgtcc 144
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>ref|XM_858604.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box
           polypeptide 30 isoform 3, transcript variant 2
           (LOC476639), mRNA
          Length = 3742

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 279 cctgcttccgcctcggcggcgtcc 302
           ||||| ||||||||||||||||||
Sbjct: 167 cctgcctccgcctcggcggcgtcc 144
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>ref|XM_540916.2| PREDICTED: Canis familiaris similar to neural stem cell-derived
            dendrite regulator (LOC483795), mRNA
          Length = 1938

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 165  cggggccgtgcccgtggccggtgg 188
            |||||||| |||||||||||||||
Sbjct: 1903 cggggccgggcccgtggccggtgg 1880
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>ref|XM_570947.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNE03740) partial mRNA
          Length = 3332

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 95   gtggtggtgatggtggccgt 114
            ||||||||||||||||||||
Sbjct: 2066 gtggtggtgatggtggccgt 2047
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>emb|AL360157.12| Human DNA sequence from clone RP11-801I18 on chromosome 6q14.2-16.1
             Contains part of a novel gene, complete sequence
          Length = 197431

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    tctgctcctctccttcttcc 92
             ||||||||||||||||||||
Sbjct: 27066 tctgctcctctccttcttcc 27085
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>emb|AL355306.10| Human DNA sequence from clone RP5-947P14 on chromosome 1p13.3-21.3
             Contains a tight junction protein 3 (zona occludens 3)
             (TJP3) pseudogene and a novel gene, complete sequence
          Length = 107060

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    tctgctcctctccttcttcc 92
             ||||||||||||||||||||
Sbjct: 78571 tctgctcctctccttcttcc 78590
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 221     aagctgccggcgttccggtg 240
               ||||||||||||||||||||
Sbjct: 3799272 aagctgccggcgttccggtg 3799291
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>emb|AJ580915.1|SPA580915 Streptomyces parvulus Tu4055 cluster for borrelidin biosynthesis
          Length = 74787

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 288   gcctcggcggcgtccacgtc 307
             ||||||||||||||||||||
Sbjct: 58465 gcctcggcggcgtccacgtc 58446
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>gb|AC104976.3| Homo sapiens chromosome 8, clone RP11-191D14, complete sequence
          Length = 160755

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 73   tctgctcctctccttcttcc 92
            ||||||||||||||||||||
Sbjct: 3573 tctgctcctctccttcttcc 3592
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 95      gtggtggtgatggtggccgt 114
               ||||||||||||||||||||
Sbjct: 3075736 gtggtggtgatggtggccgt 3075717
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>gb|AC018529.12| Homo sapiens, clone RP11-4B16, complete sequence
          Length = 185590

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    gctggggctctgctcctctc 84
             ||||||||||||||||||||
Sbjct: 59254 gctggggctctgctcctctc 59273
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>gb|AC068394.14| Homo sapiens chromosome 8, clone RP11-340H8, complete sequence
          Length = 177005

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    tctgctcctctccttcttcc 92
             ||||||||||||||||||||
Sbjct: 48093 tctgctcctctccttcttcc 48074
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>gb|AY003872.1| Plasmodium vivax YAC 1H14, complete sequence
          Length = 199866

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 77     ctcctctccttcttccatgtggtggtga 104
              ||||||| ||||| ||||||||||||||
Sbjct: 176151 ctcctctgcttctaccatgtggtggtga 176124
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 95      gtggtggtgatggtggccgt 114
               ||||||||||||||||||||
Sbjct: 3115715 gtggtggtgatggtggccgt 3115696



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 282     gcttccgcctcggcggcgtc 301
               ||||||||||||||||||||
Sbjct: 2785672 gcttccgcctcggcggcgtc 2785691
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete
             genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   ccggggccgtgcccgtggcc 183
             ||||||||||||||||||||
Sbjct: 92048 ccggggccgtgcccgtggcc 92067
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>dbj|AK041094.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
            enriched library, clone:A530082K19
            product:unclassifiable, full insert sequence
          Length = 4028

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  agctcaagttatttaacaag 223
            ||||||||||||||||||||
Sbjct: 1123 agctcaagttatttaacaag 1142
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>gb|BC096484.1| Mus musculus cDNA clone IMAGE:5293208
          Length = 2529

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 157 gctccctccggggccgtgcc 176
           ||||||||||||||||||||
Sbjct: 15  gctccctccggggccgtgcc 34
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 292      cggcggcgtccacgtcatcccgat 315
                |||||||||||||||| |||||||
Sbjct: 21434672 cggcggcgtccacgtcgtcccgat 21434649
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>gb|AY968215.1| Rubella virus strain RVI/Anhui.CHN/00 structural protein gene,
           complete cds
          Length = 3192

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  tggtgatggtggccgtaatg 118
           ||||||||||||||||||||
Sbjct: 989 tggtgatggtggccgtaatg 970
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>gb|AY968213.1| Rubella virus strain RVI/SHANDONG.CHN/00 structural protein gene,
           complete cds
          Length = 3192

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  tggtgatggtggccgtaatg 118
           ||||||||||||||||||||
Sbjct: 989 tggtgatggtggccgtaatg 970
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>gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genomic sequence, complete
              sequence
          Length = 127210

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 331    cgccagggaggtgctcaaga 350
              ||||||||||||||||||||
Sbjct: 117328 cgccagggaggtgctcaaga 117309



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 332   gccagggaggtgctcaagaagcaggacg 359
             ||||||||||||||||||| ||| ||||
Sbjct: 77475 gccagggaggtgctcaagacgcacgacg 77448
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>gb|AC093330.25| Homo sapiens chromosome 18, clone RP11-862L9, complete sequence
          Length = 198182

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     gctggggctctgctcctctc 84
              ||||||||||||||||||||
Sbjct: 195590 gctggggctctgctcctctc 195609
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>gb|AC016622.5|AC016622 Homo sapiens chromosome 5 clone CTD-2343F18, complete sequence
          Length = 110085

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    tctgctcctctccttcttcc 92
             ||||||||||||||||||||
Sbjct: 47053 tctgctcctctccttcttcc 47072
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>emb|AJ583532.1| Triticum aestivum mRNA for cytochrome P450 (CYP98A12 gene)
          Length = 1774

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 164 ccggggccgtgcccgtggccggtg 187
           ||||||||| ||||||||||||||
Sbjct: 163 ccggggccgcgcccgtggccggtg 186
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>gb|AC008833.5|AC008833 Homo sapiens chromosome 5 clone CTD-2146O16, complete sequence
          Length = 141894

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    tctgctcctctccttcttcc 92
             ||||||||||||||||||||
Sbjct: 71048 tctgctcctctccttcttcc 71067
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>dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0528B09
          Length = 156897

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 292   cggcggcgtccacgtcatcccgat 315
             |||||||||||||||| |||||||
Sbjct: 38667 cggcggcgtccacgtcgtcccgat 38644
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>dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0524F03
          Length = 167696

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 292    cggcggcgtccacgtcatcccgat 315
              |||||||||||||||| |||||||
Sbjct: 134597 cggcggcgtccacgtcgtcccgat 134574
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>dbj|AK111441.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-A07, full
           insert sequence
          Length = 2154

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 331 cgccagggaggtgctcaaga 350
           ||||||||||||||||||||
Sbjct: 603 cgccagggaggtgctcaaga 622
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>dbj|AK069017.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170D06, full
           insert sequence
          Length = 1763

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 332 gccagggaggtgctcaagaagcaggacg 359
           ||||||||||||||||||| ||| ||||
Sbjct: 342 gccagggaggtgctcaagacgcacgacg 369
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 165     cggggccgtgcccgtggccg 184
               ||||||||||||||||||||
Sbjct: 1554514 cggggccgtgcccgtggccg 1554495
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>emb|AL691472.6| Mouse DNA sequence from clone RP23-217C12 on chromosome 2, complete
              sequence
          Length = 212364

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     cctctccttcttccatgtgg 98
              ||||||||||||||||||||
Sbjct: 197954 cctctccttcttccatgtgg 197973
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>gb|AC170255.8| Mus musculus chromosome 1, clone RP23-359K18, complete sequence
          Length = 226189

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   agctcaagttatttaacaag 223
             ||||||||||||||||||||
Sbjct: 46642 agctcaagttatttaacaag 46623
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>gb|AC122127.31| Mus musculus chromosome 1, clone RP24-401K1, complete sequence
          Length = 193324

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 246   atcaggtgatggagaagatg 265
             ||||||||||||||||||||
Sbjct: 64786 atcaggtgatggagaagatg 64767
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>gb|AC171328.2| Mus musculus chromosome 1, clone wi1-817D1, complete sequence
          Length = 41955

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  agctcaagttatttaacaag 223
            ||||||||||||||||||||
Sbjct: 5326 agctcaagttatttaacaag 5345


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,841,316
Number of Sequences: 3902068
Number of extensions: 2841316
Number of successful extensions: 82376
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81781
Number of HSP's gapped (non-prelim): 595
length of query: 405
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 383
effective length of database: 17,147,199,772
effective search space: 6567377512676
effective search space used: 6567377512676
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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