>YCF2_PANGI (Q68RU4) Protein ycf2|
          Length = 2110

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -1

Query: 310 WRNWTGSKRGSSQPEGLQRHLRKP 239
           WRNW G KR SSQ +G     R P
Sbjct: 181 WRNWIGKKRDSSQLKGSSDQSRDP 204

>HRP1_PLAFA (P05227) Histidine-rich protein precursor (Clone PFHRP-II)|
          Length = 332

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 14/44 (31%), Positives = 14/44 (31%)
 Frame = -3

Query: 194 HAAXXXXXXXXXXXGHPLAAEDVAVLHHAHHRRGRRQLGGARHA 63
           HAA            H   A   A  HHAHH         A HA
Sbjct: 176 HAAYAHHAHHAADAHHAADAHHAAYAHHAHHAADAHHAADAHHA 219



 Score = 29.3 bits (64), Expect = 5.3
 Identities = 14/44 (31%), Positives = 14/44 (31%)
 Frame = -3

Query: 194 HAAXXXXXXXXXXXGHPLAAEDVAVLHHAHHRRGRRQLGGARHA 63
           HAA            H   A   A  HHAHH         A HA
Sbjct: 155 HAAYAHHAHHASDAHHAADAHHAAYAHHAHHAADAHHAADAHHA 198

>YCF2_OENHO (Q9MEF2) Protein ycf2|
          Length = 2280

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -1

Query: 316 TKWRNWTGSKRGSS 275
           TKWRNW G +R SS
Sbjct: 155 TKWRNWIGKRRDSS 168

>R1AB_CVMJH (P19751) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)|
            [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)]
            [Contains: p28; p65; p210 (EC 3.4.22.-) (Papain-like
            proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2 (p44);
            3C-like proteinase
          Length = 7180

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +3

Query: 213  CLKYGRPDLGFLKWRWRPSGCELPRFDPVQFLHFVRHK 326
            CL      L F KW+WR  G E     P++F+  V  K
Sbjct: 1721 CLMLQHLSLKFPKWQWRRPGNEFRSGKPLRFVSLVLAK 1758


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,532,778
Number of Sequences: 219361
Number of extensions: 968836
Number of successful extensions: 3816
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3804
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)