ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast06b04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473269.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 837 Score = 331 bits (167), Expect = 1e-87 Identities = 221/239 (92%) Strand = Plus / Plus Query: 191 ggcggctgtcgacgtggagtggcggccggccaccgcgacgtggtacggcgacgccgaggg 250 |||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 123 ggcggcggtcgacatggagtggcggccggcgaccgcgacgtggtacggcgacgccgaagg 182 Query: 251 cgacggtagcaccgggggagcgtgcgggtacgggacgctggtggacgtggtgccgatgaa 310 |||||| |||||||| || ||||| ||||| || ||||||||||||||||||||||||| Sbjct: 183 cgacggcagcaccggcggggcgtgtgggtatggatcgctggtggacgtggtgccgatgaa 242 Query: 311 ggcgagggtggggtcggtgagcccggtgctgttcaagggcggcgaggggtgcggcgcctg 370 |||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 243 ggcgcgggtggggtcggtgagcccggtgctgttcaaggacggcgagggctgcggcgcctg 302 Query: 371 ctacaaggtgcggtgcctcgaccacggcatctgctcgcgccgcgccgtcaccgtcatcg 429 |||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 303 ctacaaggtgaagtgcctcgaccacggcatctgctcccgccgcgccgtcacggtcatcg 361 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 125 ctccgccgcgttcttgctcgacggcgggaagtc 157 ||||||| |||||||| |||||||||||||||| Sbjct: 72 ctccgcctcgttcttgttcgacggcgggaagtc 104
>ref|XM_466967.1| Oryza sativa (japonica cultivar-group), mRNA Length = 708 Score = 238 bits (120), Expect = 1e-59 Identities = 198/224 (88%) Strand = Plus / Plus Query: 206 ggagtggcggccggccaccgcgacgtggtacggcgacgccgagggcgacggtagcaccgg 265 |||||||| |||||||| || || ||||||||| ||| || |||||||| ||| ||| Sbjct: 129 ggagtggcacccggccacggccacctggtacggcagcgctgacggcgacggcagcgacgg 188 Query: 266 gggagcgtgcgggtacgggacgctggtggacgtggtgccgatgaaggcgagggtggggtc 325 || ||||| || ||||||||||||||||||||||||||||||||| || ||||||| | Sbjct: 189 cggcgcgtgtggatacgggacgctggtggacgtggtgccgatgaagacgcgggtgggcgc 248 Query: 326 ggtgagcccggtgctgttcaagggcggcgaggggtgcggcgcctgctacaaggtgcggtg 385 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 249 ggtgagccccgtgctgttcaagggcggcgaggggtgcggcgcctgctacaaggtgcgttg 308 Query: 386 cctcgaccacggcatctgctcgcgccgcgccgtcaccgtcatcg 429 ||||||| | ||||||||||||||||||||||||| ||||||| Sbjct: 309 cctcgacgccagcatctgctcgcgccgcgccgtcacggtcatcg 352
>gb|AF391110.1| Oryza sativa beta-expansin OsEXPB17 (EXPB17) gene, partial cds Length = 4529 Score = 230 bits (116), Expect = 3e-57 Identities = 137/144 (95%) Strand = Plus / Plus Query: 286 cgctggtggacgtggtgccgatgaaggcgagggtggggtcggtgagcccggtgctgttca 345 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 3526 cgctggtggacgtggtgccgatgaaggcgcgggtggggtcggtgagcccggtgctgttca 3585 Query: 346 agggcggcgaggggtgcggcgcctgctacaaggtgcggtgcctcgaccacggcatctgct 405 ||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 3586 aggacggcgagggctgcggcgcctgctacaaggtgaagtgcctcgaccacggcatctgct 3645 Query: 406 cgcgccgcgccgtcaccgtcatcg 429 | |||||||||||||| ||||||| Sbjct: 3646 cccgccgcgccgtcacggtcatcg 3669 Score = 109 bits (55), Expect = 7e-21 Identities = 70/75 (93%) Strand = Plus / Plus Query: 191 ggcggctgtcgacgtggagtggcggccggccaccgcgacgtggtacggcgacgccgaggg 250 |||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 2241 ggcggcggtcgacatggagtggcggccggcgaccgcgacgtggtacggcgacgccgaagg 2300 Query: 251 cgacggtagcaccgg 265 |||||| |||||||| Sbjct: 2301 cgacggcagcaccgg 2315 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 125 ctccgccgcgttcttgctcgacggcgggaagtc 157 ||||||| |||||||| |||||||||||||||| Sbjct: 2190 ctccgcctcgttcttgttcgacggcgggaagtc 2222
>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01, complete sequence Length = 140454 Score = 230 bits (116), Expect = 3e-57 Identities = 137/144 (95%) Strand = Plus / Plus Query: 286 cgctggtggacgtggtgccgatgaaggcgagggtggggtcggtgagcccggtgctgttca 345 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 29283 cgctggtggacgtggtgccgatgaaggcgcgggtggggtcggtgagcccggtgctgttca 29342 Query: 346 agggcggcgaggggtgcggcgcctgctacaaggtgcggtgcctcgaccacggcatctgct 405 ||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 29343 aggacggcgagggctgcggcgcctgctacaaggtgaagtgcctcgaccacggcatctgct 29402 Query: 406 cgcgccgcgccgtcaccgtcatcg 429 | |||||||||||||| ||||||| Sbjct: 29403 cccgccgcgccgtcacggtcatcg 29426 Score = 109 bits (55), Expect = 7e-21 Identities = 70/75 (93%) Strand = Plus / Plus Query: 191 ggcggctgtcgacgtggagtggcggccggccaccgcgacgtggtacggcgacgccgaggg 250 |||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 27998 ggcggcggtcgacatggagtggcggccggcgaccgcgacgtggtacggcgacgccgaagg 28057 Query: 251 cgacggtagcaccgg 265 |||||| |||||||| Sbjct: 28058 cgacggcagcaccgg 28072 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 125 ctccgccgcgttcttgctcgacggcgggaagtc 157 ||||||| |||||||| |||||||||||||||| Sbjct: 27947 ctccgcctcgttcttgttcgacggcgggaagtc 27979
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 230 bits (116), Expect = 3e-57 Identities = 137/144 (95%) Strand = Plus / Plus Query: 286 cgctggtggacgtggtgccgatgaaggcgagggtggggtcggtgagcccggtgctgttca 345 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 26492396 cgctggtggacgtggtgccgatgaaggcgcgggtggggtcggtgagcccggtgctgttca 26492455 Query: 346 agggcggcgaggggtgcggcgcctgctacaaggtgcggtgcctcgaccacggcatctgct 405 ||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 26492456 aggacggcgagggctgcggcgcctgctacaaggtgaagtgcctcgaccacggcatctgct 26492515 Query: 406 cgcgccgcgccgtcaccgtcatcg 429 | |||||||||||||| ||||||| Sbjct: 26492516 cccgccgcgccgtcacggtcatcg 26492539 Score = 109 bits (55), Expect = 7e-21 Identities = 70/75 (93%) Strand = Plus / Plus Query: 191 ggcggctgtcgacgtggagtggcggccggccaccgcgacgtggtacggcgacgccgaggg 250 |||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 26491111 ggcggcggtcgacatggagtggcggccggcgaccgcgacgtggtacggcgacgccgaagg 26491170 Query: 251 cgacggtagcaccgg 265 |||||| |||||||| Sbjct: 26491171 cgacggcagcaccgg 26491185 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 125 ctccgccgcgttcttgctcgacggcgggaagtc 157 ||||||| |||||||| |||||||||||||||| Sbjct: 26491060 ctccgcctcgttcttgttcgacggcgggaagtc 26491092
>dbj|AK107184.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-H07, full insert sequence Length = 1414 Score = 230 bits (116), Expect = 3e-57 Identities = 137/144 (95%) Strand = Plus / Plus Query: 286 cgctggtggacgtggtgccgatgaaggcgagggtggggtcggtgagcccggtgctgttca 345 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 201 cgctggtggacgtggtgccgatgaaggcgcgggtggggtcggtgagcccggtgctgttca 260 Query: 346 agggcggcgaggggtgcggcgcctgctacaaggtgcggtgcctcgaccacggcatctgct 405 ||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 261 aggacggcgagggctgcggcgcctgctacaaggtgaagtgcctcgaccacggcatctgct 320 Query: 406 cgcgccgcgccgtcaccgtcatcg 429 | |||||||||||||| ||||||| Sbjct: 321 cccgccgcgccgtcacggtcatcg 344
>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08, complete sequence Length = 171551 Score = 230 bits (116), Expect = 3e-57 Identities = 137/144 (95%) Strand = Plus / Plus Query: 286 cgctggtggacgtggtgccgatgaaggcgagggtggggtcggtgagcccggtgctgttca 345 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 133036 cgctggtggacgtggtgccgatgaaggcgcgggtggggtcggtgagcccggtgctgttca 133095 Query: 346 agggcggcgaggggtgcggcgcctgctacaaggtgcggtgcctcgaccacggcatctgct 405 ||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 133096 aggacggcgagggctgcggcgcctgctacaaggtgaagtgcctcgaccacggcatctgct 133155 Query: 406 cgcgccgcgccgtcaccgtcatcg 429 | |||||||||||||| ||||||| Sbjct: 133156 cccgccgcgccgtcacggtcatcg 133179 Score = 109 bits (55), Expect = 7e-21 Identities = 70/75 (93%) Strand = Plus / Plus Query: 191 ggcggctgtcgacgtggagtggcggccggccaccgcgacgtggtacggcgacgccgaggg 250 |||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 131751 ggcggcggtcgacatggagtggcggccggcgaccgcgacgtggtacggcgacgccgaagg 131810 Query: 251 cgacggtagcaccgg 265 |||||| |||||||| Sbjct: 131811 cgacggcagcaccgg 131825 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 125 ctccgccgcgttcttgctcgacggcgggaagtc 157 ||||||| |||||||| |||||||||||||||| Sbjct: 131700 ctccgcctcgttcttgttcgacggcgggaagtc 131732
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 222 bits (112), Expect = 7e-55 Identities = 148/160 (92%) Strand = Plus / Plus Query: 270 gcgtgcgggtacgggacgctggtggacgtggtgccgatgaaggcgagggtggggtcggtg 329 ||||| || ||||||||||||||||||||||||||||||||| || ||||||| ||||| Sbjct: 25672495 gcgtgtggatacgggacgctggtggacgtggtgccgatgaagacgcgggtgggcgcggtg 25672554 Query: 330 agcccggtgctgttcaagggcggcgaggggtgcggcgcctgctacaaggtgcggtgcctc 389 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 25672555 agccccgtgctgttcaagggcggcgaggggtgcggcgcctgctacaaggtgcgttgcctc 25672614 Query: 390 gaccacggcatctgctcgcgccgcgccgtcaccgtcatcg 429 ||| | ||||||||||||||||||||||||| ||||||| Sbjct: 25672615 gacgccagcatctgctcgcgccgcgccgtcacggtcatcg 25672654 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 329 gagcccggtgctgttcaagggcggcgaggggtgcggcgcctgcta 373 ||||||| ||||| |||||| ||| ||||||||||||| ||||| Sbjct: 26667847 gagcccgtcgctgtacaagggaggcaaggggtgcggcgcgtgcta 26667891 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 ccctctcgcgccgccgccgcc 86 ||||||||||||||||||||| Sbjct: 2486632 ccctctcgcgccgccgccgcc 2486652 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ctccctctcgcgccgccgcc 83 |||||||||||||||||||| Sbjct: 1655430 ctccctctcgcgccgccgcc 1655411
>dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014E22 Length = 157627 Score = 222 bits (112), Expect = 7e-55 Identities = 148/160 (92%) Strand = Plus / Plus Query: 270 gcgtgcgggtacgggacgctggtggacgtggtgccgatgaaggcgagggtggggtcggtg 329 ||||| || ||||||||||||||||||||||||||||||||| || ||||||| ||||| Sbjct: 142542 gcgtgtggatacgggacgctggtggacgtggtgccgatgaagacgcgggtgggcgcggtg 142601 Query: 330 agcccggtgctgttcaagggcggcgaggggtgcggcgcctgctacaaggtgcggtgcctc 389 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 142602 agccccgtgctgttcaagggcggcgaggggtgcggcgcctgctacaaggtgcgttgcctc 142661 Query: 390 gaccacggcatctgctcgcgccgcgccgtcaccgtcatcg 429 ||| | ||||||||||||||||||||||||| ||||||| Sbjct: 142662 gacgccagcatctgctcgcgccgcgccgtcacggtcatcg 142701
>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0010C01 Length = 186185 Score = 222 bits (112), Expect = 7e-55 Identities = 148/160 (92%) Strand = Plus / Plus Query: 270 gcgtgcgggtacgggacgctggtggacgtggtgccgatgaaggcgagggtggggtcggtg 329 ||||| || ||||||||||||||||||||||||||||||||| || ||||||| ||||| Sbjct: 75171 gcgtgtggatacgggacgctggtggacgtggtgccgatgaagacgcgggtgggcgcggtg 75230 Query: 330 agcccggtgctgttcaagggcggcgaggggtgcggcgcctgctacaaggtgcggtgcctc 389 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 75231 agccccgtgctgttcaagggcggcgaggggtgcggcgcctgctacaaggtgcgttgcctc 75290 Query: 390 gaccacggcatctgctcgcgccgcgccgtcaccgtcatcg 429 ||| | ||||||||||||||||||||||||| ||||||| Sbjct: 75291 gacgccagcatctgctcgcgccgcgccgtcacggtcatcg 75330
>gb|DQ100334.1| Eucalyptus globulus putative beta-expansin (EXPB1) mRNA, partial cds Length = 979 Score = 89.7 bits (45), Expect = 7e-15 Identities = 129/157 (82%) Strand = Plus / Plus Query: 273 tgcgggtacgggacgctggtggacgtggtgccgatgaaggcgagggtggggtcggtgagc 332 |||||||||||| || ||||||||||| |||| || ||| |||| ||| | |||||| Sbjct: 1 tgcgggtacgggtcgatggtggacgtgaggccgctgcgggcccgggtcggggcagtgagc 60 Query: 333 ccggtgctgttcaagggcggcgaggggtgcggcgcctgctacaaggtgcggtgcctcgac 392 ||||||||||||||| ||||||||| ||||| || |||||||||||| ||||| ||| Sbjct: 61 ccggtgctgttcaagaacggcgagggctgcggggcgtgctacaaggtgaagtgccaggac 120 Query: 393 cacggcatctgctcgcgccgcgccgtcaccgtcatcg 429 | ||||||||||| || | ||||||||| |||||| Sbjct: 121 cggggcatctgctcccggagggccgtcaccatcatcg 157
>ref|NM_197592.1| Oryza sativa (japonica cultivar-group) putative pollen allergen (OSJNBb0015I11.10), mRNA Length = 898 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 329 gagcccggtgctgttcaagggcggcgaggggtgcggcgcctgctacaaggtgcggtgc 386 |||||||| |||||||| |||||| | || ||||||||||||| | ||||||||||| Sbjct: 283 gagcccggcgctgttcaggggcggtgtcggctgcggcgcctgcttccaggtgcggtgc 340
>dbj|AK068088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131C11, full insert sequence Length = 1196 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 329 gagcccggtgctgttcaagggcggcgaggggtgcggcgcctgctacaaggtgcggtgc 386 |||||||| |||||||| |||||| | || ||||||||||||| | ||||||||||| Sbjct: 467 gagcccggcgctgttcaggggcggtgtcggctgcggcgcctgcttccaggtgcggtgc 524
>dbj|AK066611.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071J19, full insert sequence Length = 1023 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 329 gagcccggtgctgttcaagggcggcgaggggtgcggcgcctgctacaaggtgcggtgc 386 |||||||| |||||||| |||||| | || ||||||||||||| | ||||||||||| Sbjct: 299 gagcccggcgctgttcaggggcggtgtcggctgcggcgcctgcttccaggtgcggtgc 356
>gb|AY466441.1| Saccharopolyspora spinosa NRLL 18395 obscurin polyketide synthase gene locus, complete sequence Length = 108584 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 346 agggcggcgaggggtgcggcgcct 369 |||||||||||||||||||||||| Sbjct: 13418 agggcggcgaggggtgcggcgcct 13441
>dbj|AB063179.1| Hordeum vulgare BBD1 mRNA for betaine aldehyde dehydrogenase, complete cds Length = 1909 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 130 ccgcgttcttgctcgacggcggga 153 |||||||||||||||||||||||| Sbjct: 241 ccgcgttcttgctcgacggcggga 264
>gb|AC104631.2| Drosophila melanogaster clone BACR35D19, complete sequence Length = 166908 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 170 caaggccaagggcaacggcaagg 192 ||||||||||||||||||||||| Sbjct: 88072 caaggccaagggcaacggcaagg 88050
>ref|NM_134588.1| Drosophila melanogaster CG1503-RA (CG1503), mRNA Length = 1235 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 170 caaggccaagggcaacggcaagg 192 ||||||||||||||||||||||| Sbjct: 353 caaggccaagggcaacggcaagg 375
>gb|AF332181.1|AF332181 Zea mays beta-expansin 8 (expB8) mRNA, complete cds Length = 1479 Score = 46.1 bits (23), Expect = 0.093 Identities = 41/47 (87%) Strand = Plus / Plus Query: 340 tgttcaagggcggcgaggggtgcggcgcctgctacaaggtgcggtgc 386 ||||||||| |||| |||| |||||| ||||||||||| | |||||| Sbjct: 376 tgttcaaggacggcaagggctgcggctcctgctacaagattcggtgc 422
>gb|BT004894.1| Drosophila melanogaster LD44327 full insert cDNA Length = 1214 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 170 caaggccaagggcaacggcaagg 192 ||||||||||||||||||||||| Sbjct: 314 caaggccaagggcaacggcaagg 336
>gb|AY107405.1| Zea mays PCO140045 mRNA sequence Length = 624 Score = 46.1 bits (23), Expect = 0.093 Identities = 41/47 (87%) Strand = Plus / Plus Query: 340 tgttcaagggcggcgaggggtgcggcgcctgctacaaggtgcggtgc 386 ||||||||| |||| |||| |||||| ||||||||||| | |||||| Sbjct: 366 tgttcaaggacggcaagggatgcggctcctgctacaagattcggtgc 412
>gb|AE003569.4| Drosophila melanogaster chromosome X, section 70 of 74 of the complete sequence Length = 283558 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 170 caaggccaagggcaacggcaagg 192 ||||||||||||||||||||||| Sbjct: 184304 caaggccaagggcaacggcaagg 184282
>ref|NM_127640.1| Arabidopsis thaliana ATEXPB1 (ARABIDOPSIS THALIANA EXPANSIN B1) AT2G20750 (ATEXPB1) mRNA, complete cds Length = 1137 Score = 44.1 bits (22), Expect = 0.37 Identities = 118/150 (78%) Strand = Plus / Plus Query: 243 gccgagggcgacggtagcaccgggggagcgtgcgggtacgggacgctggtggacgtggtg 302 |||||||| ||||| |||| ||| ||||| || || ||||| || ||||||||||| | Sbjct: 215 gccgagggagacggcagcagcggaggagcttgtggttacggatcgttggtggacgtgaag 274 Query: 303 ccgatgaaggcgagggtggggtcggtgagcccggtgctgttcaagggcggcgaggggtgc 362 ||| | ||||| || || || ||||||| ||| | |||||||| || || || || ||| Sbjct: 275 ccgtttaaggctagagtcggagcggtgagtccgattctgttcaaaggtggtgaaggctgc 334 Query: 363 ggcgcctgctacaaggtgcggtgcctcgac 392 || || ||||||||||| |||| |||||| Sbjct: 335 ggtgcatgctacaaggtcaggtgtctcgac 364
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 165 aagggcaaggccaagggcaacggcaa 190 |||||||||| ||||||||||||||| Sbjct: 2801749 aagggcaagggcaagggcaacggcaa 2801724
>gb|AF332177.1|AF332177 Zea mays beta-expansin 4 (expB4) mRNA, complete cds Length = 1273 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 351 ggcgaggggtgcggcgcctgctacaaggtg 380 |||||||| ||||||||||||||| ||||| Sbjct: 481 ggcgagggctgcggcgcctgctacgaggtg 510
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 64 ctccctctcgcgccgccgccgc 85 |||||||||||||||||||||| Sbjct: 1020381 ctccctctcgcgccgccgccgc 1020360
>gb|BT005024.1| Arabidopsis thaliana clone U20717 putative beta-expansin pollen allergen protein (At2g20750) mRNA, complete cds Length = 847 Score = 44.1 bits (22), Expect = 0.37 Identities = 118/150 (78%) Strand = Plus / Plus Query: 243 gccgagggcgacggtagcaccgggggagcgtgcgggtacgggacgctggtggacgtggtg 302 |||||||| ||||| |||| ||| ||||| || || ||||| || ||||||||||| | Sbjct: 151 gccgagggagacggcagcagcggaggagcttgtggttacggatcgttggtggacgtgaag 210 Query: 303 ccgatgaaggcgagggtggggtcggtgagcccggtgctgttcaagggcggcgaggggtgc 362 ||| | ||||| || || || ||||||| ||| | |||||||| || || || || ||| Sbjct: 211 ccgtttaaggctagagtcggagcggtgagtccgattctgttcaaaggtggtgaaggctgc 270 Query: 363 ggcgcctgctacaaggtgcggtgcctcgac 392 || || ||||||||||| |||| |||||| Sbjct: 271 ggtgcatgctacaaggtcaggtgtctcgac 300
>dbj|AB183715.1| Leymus chinensis LcBADH1 mRNA for betaine aldehyde dehydrogenase, partial cds Length = 2108 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 gcgttcttgctcgacggcggga 153 |||||||||||||||||||||| Sbjct: 163 gcgttcttgctcgacggcggga 184
>gb|BT003932.1| Arabidopsis thaliana clone RAFL15-12-F16 (R20717) putative beta-expansin pollen allergen protein (At2g20750) mRNA, complete cds Length = 1124 Score = 44.1 bits (22), Expect = 0.37 Identities = 118/150 (78%) Strand = Plus / Plus Query: 243 gccgagggcgacggtagcaccgggggagcgtgcgggtacgggacgctggtggacgtggtg 302 |||||||| ||||| |||| ||| ||||| || || ||||| || ||||||||||| | Sbjct: 213 gccgagggagacggcagcagcggaggagcttgtggttacggatcgttggtggacgtgaag 272 Query: 303 ccgatgaaggcgagggtggggtcggtgagcccggtgctgttcaagggcggcgaggggtgc 362 ||| | ||||| || || || ||||||| ||| | |||||||| || || || || ||| Sbjct: 273 ccgtttaaggctagagtcggagcggtgagtccgattctgttcaaaggtggtgaaggctgc 332 Query: 363 ggcgcctgctacaaggtgcggtgcctcgac 392 || || ||||||||||| |||| |||||| Sbjct: 333 ggtgcatgctacaaggtcaggtgtctcgac 362
>gb|AY084478.1| Arabidopsis thaliana clone 109135 mRNA, complete sequence Length = 1137 Score = 44.1 bits (22), Expect = 0.37 Identities = 118/150 (78%) Strand = Plus / Plus Query: 243 gccgagggcgacggtagcaccgggggagcgtgcgggtacgggacgctggtggacgtggtg 302 |||||||| ||||| |||| ||| ||||| || || ||||| || ||||||||||| | Sbjct: 215 gccgagggagacggcagcagcggaggagcttgtggttacggatcgttggtggacgtgaag 274 Query: 303 ccgatgaaggcgagggtggggtcggtgagcccggtgctgttcaagggcggcgaggggtgc 362 ||| | ||||| || || || ||||||| ||| | |||||||| || || || || ||| Sbjct: 275 ccgtttaaggctagagtcggagcggtgagtccgattctgttcaaaggtggtgaaggctgc 334 Query: 363 ggcgcctgctacaaggtgcggtgcctcgac 392 || || ||||||||||| |||| |||||| Sbjct: 335 ggtgcatgctacaaggtcaggtgtctcgac 364
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 67 cctctcgcgccgccgccgcccccttggcgc 96 |||| ||||||||||||||| ||||||||| Sbjct: 1282779 cctcgcgcgccgccgccgccaccttggcgc 1282808
>dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0699E04 Length = 175439 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 64 ctccctctcgcgccgccgccgc 85 |||||||||||||||||||||| Sbjct: 110778 ctccctctcgcgccgccgccgc 110757
>gb|U95967.1|ATU95967 Arabidopsis thaliana beta-expansin mRNA, partial cds Length = 1037 Score = 44.1 bits (22), Expect = 0.37 Identities = 118/150 (78%) Strand = Plus / Plus Query: 243 gccgagggcgacggtagcaccgggggagcgtgcgggtacgggacgctggtggacgtggtg 302 |||||||| ||||| |||| ||| ||||| || || ||||| || ||||||||||| | Sbjct: 117 gccgagggagacggcagcagcggaggagcttgtggttacggatcgttggtggacgtgaag 176 Query: 303 ccgatgaaggcgagggtggggtcggtgagcccggtgctgttcaagggcggcgaggggtgc 362 ||| | ||||| || || || ||||||| ||| | |||||||| || || || || ||| Sbjct: 177 ccgtttaaggctagagtcggagcggtgagtccgattctgttcaaaggtggtgaaggctgc 236 Query: 363 ggcgcctgctacaaggtgcggtgcctcgac 392 || || ||||||||||| |||| |||||| Sbjct: 237 ggtgcatgctacaaggtcaggtgtctcgac 266
>ref|XM_482638.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2671 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 gctctgctgcattctgctgct 115 ||||||||||||||||||||| Sbjct: 2181 gctctgctgcattctgctgct 2161
>ref|NM_188790.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 756 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 328 tgagcccggtgctgttcaagggcggcgaggggtgcggcgcctgct 372 ||||| ||| ||||||||| ||||||| | |||||||||||||| Sbjct: 188 tgagcacggcgctgttcaacggcggcgcgtcgtgcggcgcctgct 232
>ref|XM_482637.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2158 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 gctctgctgcattctgctgct 115 ||||||||||||||||||||| Sbjct: 1532 gctctgctgcattctgctgct 1512
>ref|XM_482636.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1431 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 gctctgctgcattctgctgct 115 ||||||||||||||||||||| Sbjct: 946 gctctgctgcattctgctgct 966
>ref|XM_467145.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1378 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 329 gagcccggtgctgttcaagggcggcgaggggtgcggcgcctgcta 373 ||||||| ||||| |||||| ||| ||||||||||||| ||||| Sbjct: 414 gagcccgtcgctgtacaagggaggcaaggggtgcggcgcgtgcta 458
>ref|NM_013435.1| Homo sapiens retina and anterior neural fold homeobox (RAX), mRNA Length = 1775 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 cctctcgcgccgccgccgccc 87 ||||||||||||||||||||| Sbjct: 1073 cctctcgcgccgccgccgccc 1093
>gb|AF391103.1| Oryza sativa beta-expansin OsEXPB11 (EXPB11) gene, complete cds Length = 4024 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 329 gagcccggtgctgttcaagggcggcgaggggtgcggcgcctgcta 373 ||||||| ||||| |||||| ||| ||||||||||||| ||||| Sbjct: 1758 gagcccgtcgctgtacaagggaggcaaggggtgcggcgcgtgcta 1802
>gb|AC141886.3| Mus musculus BAC clone RP24-87G24 from chromosome 7, complete sequence Length = 173677 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 164 gaagggcaaggccaagggcaacggcaagg 192 ||||||||||| ||||||||| ||||||| Sbjct: 20965 gaagggcaagggcaagggcaagggcaagg 20993
>gb|AC100727.10| Mus musculus chromosome 1, clone RP24-278K16, complete sequence Length = 170056 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 164 gaagggcaaggccaagggcaacggcaagg 192 ||||||||||| ||||||||| ||||||| Sbjct: 148554 gaagggcaagggcaagggcaagggcaagg 148526
>emb|AJ566331.1|FSY566331 Ficus sycomorus microsatellite DNA, clone FIGT06C09 Length = 275 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 164 gaagggcaaggccaagggcaacggcaagg 192 ||||||||||| ||||||||| ||||||| Sbjct: 137 gaagggcaagggcaagggcaagggcaagg 165
>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence Length = 182756 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 328 tgagcccggtgctgttcaagggcggcgaggggtgcggcgcctgct 372 ||||| ||| ||||||||| ||||||| | |||||||||||||| Sbjct: 159900 tgagcacggcgctgttcaacggcggcgcgtcgtgcggcgcctgct 159856
>gb|AC121830.3| Mus musculus BAC clone RP24-63N24 from chromosome 7, complete sequence Length = 211478 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 164 gaagggcaaggccaagggcaacggcaagg 192 ||||||||||| ||||||||| ||||||| Sbjct: 193408 gaagggcaagggcaagggcaagggcaagg 193436
>gb|BC051901.1| Homo sapiens retina and anterior neural fold homeobox, mRNA (cDNA clone IMAGE:6139916), complete cds Length = 2947 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 cctctcgcgccgccgccgccc 87 ||||||||||||||||||||| Sbjct: 808 cctctcgcgccgccgccgccc 828
>ref|NM_001029870.1| Homo sapiens similar to RIKEN cDNA 5730467H21 (LOC345079), mRNA Length = 2921 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 ggctccctctcgcgccgccgccgcc 86 |||||| |||||||||||||||||| Sbjct: 386 ggctccttctcgcgccgccgccgcc 362
>gb|AC069078.5| Homo sapiens chromosome 10 clone RP11-492B17, complete sequence Length = 187669 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 cgcgccgccgccgcccccttggcgc 96 |||||||| |||||||||||||||| Sbjct: 150408 cgcgccgcagccgcccccttggcgc 150432
>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete sequence Length = 147117 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 340 tgttcaagggcggcgaggggtgcggcgcctgctacaaggtg 380 ||||||||| |||| |||| |||||| | |||||||||||| Sbjct: 15378 tgttcaaggacggcaagggatgcggctcttgctacaaggtg 15418
>gb|AC067859.7| Homo sapiens chromosome 18, clone RP11-569D6, complete sequence Length = 195609 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cctctcgcgccgccgccgccc 87 ||||||||||||||||||||| Sbjct: 134959 cctctcgcgccgccgccgccc 134939
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 340 tgttcaagggcggcgaggggtgcggcgcctgctacaaggtg 380 ||||||||| |||| |||| |||||| | |||||||||||| Sbjct: 21340365 tgttcaaggacggcaagggatgcggctcttgctacaaggtg 21340405 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 gcgccgccgccgcccccttggcgc 96 ||||||||||||||||||| |||| Sbjct: 18659276 gcgccgccgccgcccccttagcgc 18659299
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 ctccctctcgcgccgccgccgcccc 88 |||||||||||||||||| |||||| Sbjct: 25436915 ctccctctcgcgccgccgtcgcccc 25436939 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 gctctgctgcattctgctgct 115 ||||||||||||||||||||| Sbjct: 21571413 gctctgctgcattctgctgct 21571433
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 ctccctctcgcgccgccgccg 84 ||||||||||||||||||||| Sbjct: 17947035 ctccctctcgcgccgccgccg 17947015 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 ccctctcgcgccgccgccgcc 86 ||||||||||||||||||||| Sbjct: 4717979 ccctctcgcgccgccgccgcc 4717999 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 359 gtgcggcgcctgctacaaggtgcggtgc 386 |||||||| ||||||| ||||||||||| Sbjct: 24600307 gtgcggcggctgctacgaggtgcggtgc 24600334 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 gctccctctcgcgccgccgccgcc 86 ||||| |||||||||||||||||| Sbjct: 17391468 gctccttctcgcgccgccgccgcc 17391445
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 328 tgagcccggtgctgttcaagggcggcgaggggtgcggcgcctgct 372 ||||| ||| ||||||||| ||||||| | |||||||||||||| Sbjct: 8195779 tgagcacggcgctgttcaacggcggcgcgtcgtgcggcgcctgct 8195735 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 ctccctctcgcgccgccgccgccc 87 ||||||||| |||||||||||||| Sbjct: 22855524 ctccctctctcgccgccgccgccc 22855501 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cctctcgcgccgccgccgcc 86 |||||||||||||||||||| Sbjct: 19347166 cctctcgcgccgccgccgcc 19347147
>gb|AC104687.3| Homo sapiens BAC clone RP11-123J14 from 4, complete sequence Length = 176662 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 ggctccctctcgcgccgccgccgcc 86 |||||| |||||||||||||||||| Sbjct: 49222 ggctccttctcgcgccgccgccgcc 49246
>gb|AC107308.7| Homo sapiens 12 BAC RP11-677M24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 98485 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 cgcgccgccgccgcccccttggcgc 96 |||||||| |||||||||||||||| Sbjct: 69635 cgcgccgcagccgcccccttggcgc 69659
>dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034C11 Length = 139399 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 328 tgagcccggtgctgttcaagggcggcgaggggtgcggcgcctgct 372 ||||| ||| ||||||||| ||||||| | |||||||||||||| Sbjct: 113497 tgagcacggcgctgttcaacggcggcgcgtcgtgcggcgcctgct 113453
>dbj|AP005072.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0708H12 Length = 162381 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 329 gagcccggtgctgttcaagggcggcgaggggtgcggcgcctgcta 373 ||||||| ||||| |||||| ||| ||||||||||||| ||||| Sbjct: 29877 gagcccgtcgctgtacaagggaggcaaggggtgcggcgcgtgcta 29921
>gb|AY589579.1| Triticum aestivum beta-expansin TaEXPB2 mRNA, complete cds Length = 897 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 342 ttcaagggcggcgaggggtgcggcgcctgctac 374 ||||||| |||| ||||||||||| |||||||| Sbjct: 287 ttcaaggacggcaaggggtgcggctcctgctac 319
>dbj|AP005929.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0071G09 Length = 169148 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 ctccctctcgcgccgccgccg 84 ||||||||||||||||||||| Sbjct: 13341 ctccctctcgcgccgccgccg 13321
>dbj|AP003618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0561B08 Length = 161083 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 ctccctctcgcgccgccgccg 84 ||||||||||||||||||||| Sbjct: 152224 ctccctctcgcgccgccgccg 152204
>dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_F09 Length = 139371 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 329 gagcccggtgctgttcaagggcggcgaggggtgcggcgcctgcta 373 ||||||| ||||| |||||| ||| ||||||||||||| ||||| Sbjct: 102008 gagcccgtcgctgtacaagggaggcaaggggtgcggcgcgtgcta 102052
>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0698A06 Length = 156514 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 ccctctcgcgccgccgccgcc 86 ||||||||||||||||||||| Sbjct: 80578 ccctctcgcgccgccgccgcc 80598
>dbj|AP005649.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0064G16 Length = 166453 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 ccctctcgcgccgccgccgcc 86 ||||||||||||||||||||| Sbjct: 102553 ccctctcgcgccgccgccgcc 102573
>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0711H09 Length = 185858 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 ctccctctcgcgccgccgccgcccc 88 |||||||||||||||||| |||||| Sbjct: 68231 ctccctctcgcgccgccgtcgcccc 68255
>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0708B04 Length = 170523 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 gctctgctgcattctgctgct 115 ||||||||||||||||||||| Sbjct: 31587 gctctgctgcattctgctgct 31607
>dbj|AK111984.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-F05, full insert sequence Length = 2158 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 gctctgctgcattctgctgct 115 ||||||||||||||||||||| Sbjct: 1532 gctctgctgcattctgctgct 1512
>dbj|AK111772.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067P10, full insert sequence Length = 2671 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 gctctgctgcattctgctgct 115 ||||||||||||||||||||| Sbjct: 2181 gctctgctgcattctgctgct 2161
>dbj|AK111100.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-G12, full insert sequence Length = 893 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 328 tgagcccggtgctgttcaagggcggcgaggggtgcggcgcctgct 372 ||||| ||| ||||||||| ||||||| | |||||||||||||| Sbjct: 197 tgagcacggcgctgttcaacggcggcgcgtcgtgcggcgcctgct 241
>dbj|AK105576.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-D11, full insert sequence Length = 1432 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 gctctgctgcattctgctgct 115 ||||||||||||||||||||| Sbjct: 947 gctctgctgcattctgctgct 967
>gb|AF115392.1|AF115392 Homo sapiens retinal homeobox protein RX mRNA, complete cds Length = 1775 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 cctctcgcgccgccgccgccc 87 ||||||||||||||||||||| Sbjct: 1073 cctctcgcgccgccgccgccc 1093
>dbj|AK101806.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066K12, full insert sequence Length = 1883 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 340 tgttcaagggcggcgaggggtgcggcgcctgctacaaggtg 380 ||||||||| |||| |||| |||||| | |||||||||||| Sbjct: 166 tgttcaaggacggcaagggatgcggctcttgctacaaggtg 206
>emb|AJ323733.1|HSA323733 Homo sapiens genomic sequence surrounding NotI site, clone NB6-170C Length = 946 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 72 cgcgccgccgccgcccccttggcgc 96 |||||||| |||||||||||||||| Sbjct: 132 cgcgccgcagccgcccccttggcgc 108
>emb|AJ328162.1|HSA328162 Homo sapiens genomic sequence surrounding NotI site, clone NL6-IN16R Length = 602 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 72 cgcgccgccgccgcccccttggcgc 96 |||||||| |||||||||||||||| Sbjct: 132 cgcgccgcagccgcccccttggcgc 108
>dbj|AK072143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129F03, full insert sequence Length = 3267 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 ctccctctcgcgccgccgccg 84 ||||||||||||||||||||| Sbjct: 119 ctccctctcgcgccgccgccg 139
>dbj|AK064385.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-E07, full insert sequence Length = 2120 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 ccctctcgcgccgccgccgcc 86 ||||||||||||||||||||| Sbjct: 145 ccctctcgcgccgccgccgcc 165
>dbj|AK060106.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C04, full insert sequence Length = 941 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 ccctctcgcgccgccgccgcc 86 ||||||||||||||||||||| Sbjct: 170 ccctctcgcgccgccgccgcc 190
>dbj|AK059638.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-B01, full insert sequence Length = 1378 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 329 gagcccggtgctgttcaagggcggcgaggggtgcggcgcctgcta 373 ||||||| ||||| |||||| ||| ||||||||||||| ||||| Sbjct: 414 gagcccgtcgctgtacaagggaggcaaggggtgcggcgcgtgcta 458
>emb|AL079302.7|CNS00M8S Human chromosome 14 DNA sequence BAC R-1089B7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 204230 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 164 gaagggcaaggccaagggcaacggcaagg 192 ||||||||||| ||||||||| ||||||| Sbjct: 194714 gaagggcaagggcaagggcaagggcaagg 194742
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 340 tgttcaagggcggcgaggggtgcggcgcctgctacaaggtg 380 ||||||||| |||| |||| |||||| | |||||||||||| Sbjct: 21351628 tgttcaaggacggcaagggatgcggctcttgctacaaggtg 21351668 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 gcgccgccgccgcccccttggcgc 96 ||||||||||||||||||| |||| Sbjct: 18670129 gcgccgccgccgcccccttagcgc 18670152
>gb|AY543538.1| Triticum aestivum expansin EXPB3 mRNA, complete cds Length = 834 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 342 ttcaagggcggcgaggggtgcggcgcctgctac 374 ||||||| |||| ||||||||||| |||||||| Sbjct: 266 ttcaaggacggcaaggggtgcggctcctgctac 298
>gb|AY543536.1| Triticum aestivum expansin EXPB1 mRNA, complete cds Length = 810 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 342 ttcaagggcggcgaggggtgcggcgcctgctac 374 ||||||| |||| ||||||||||| |||||||| Sbjct: 260 ttcaaggacggcaaggggtgcggctcctgctac 292
>gb|L41044.1|HUMHMGIC01 Homo sapiens high-mobility group phosphoprotein (HMGI-C) gene, exons 1-3, complete cds Length = 16727 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 cgcgccgccgccgcccccttggcgc 96 |||||||| |||||||||||||||| Sbjct: 3537 cgcgccgcagccgcccccttggcgc 3561
>ref|NM_127432.1| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ DNA binding / helicase/ nucleic acid binding AT2G18760 mRNA, complete cds Length = 3564 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 caagcccaacgccaatggct 65 |||||||||||||||||||| Sbjct: 3298 caagcccaacgccaatggct 3279
>ref|NM_193223.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3864 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cctctcgcgccgccgccgcc 86 |||||||||||||||||||| Sbjct: 25 cctctcgcgccgccgccgcc 6
>gb|AC102714.16| Mus musculus chromosome 5, clone RP24-298D13, complete sequence Length = 165774 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ctcgcgccgccgccgccccc 89 |||||||||||||||||||| Sbjct: 111486 ctcgcgccgccgccgccccc 111505
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 cgaagggcaaggccaagggc 182 |||||||||||||||||||| Sbjct: 5528800 cgaagggcaaggccaagggc 5528819
>gb|AF394552.1| Oryza sativa alpha-expansin OsEXPA16 (EXPA16) gene, partial cds Length = 3267 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 359 gtgcggcgcctgctacaaggtgcggtgc 386 |||||||| ||||||| ||||||||||| Sbjct: 273 gtgcggcggctgctacgaggtgcggtgc 300
>gb|AY188952.1| Hordeum brevisubulatum betaine aldehyde dehydrogenase (BADH) mRNA, complete cds Length = 1776 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gttcttgctcgacggcggga 153 |||||||||||||||||||| Sbjct: 259 gttcttgctcgacggcggga 278
>gb|AY316747.1| Rhizobium sp. NGR234 megaplasmid 2 contig 1, complete sequence Length = 357655 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 ggaagtcggcggcgaagggc 170 |||||||||||||||||||| Sbjct: 82434 ggaagtcggcggcgaagggc 82415
>ref|NM_013021.1| Rattus norvegicus retinal degeneration, slow (Rds), mRNA Length = 1562 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 tggcgctctgctgcattctgctgc 114 |||||||||||||| ||||||||| Sbjct: 466 tggcgctctgctgctttctgctgc 489
>gb|AC078840.6| Oryza sativa chromosome 10 BAC OSJNBb0073N24 genomic sequence, complete sequence Length = 130058 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 gcgccgccgccgcccccttggcgc 96 ||||||||||||||||||| |||| Sbjct: 20554 gcgccgccgccgcccccttagcgc 20577
>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16 Length = 349841 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 cgtggtacggcgacgccgag 248 |||||||||||||||||||| Sbjct: 348808 cgtggtacggcgacgccgag 348827
>emb|AJ633545.1| Myxococcus xanthus groEL gene for chaperonin GroEL Length = 1644 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 cgaagggcaaggccaagggc 182 |||||||||||||||||||| Sbjct: 1571 cgaagggcaaggccaagggc 1590
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 286 cgctggtggacgtggtgccgatga 309 ||||| |||||||||||||||||| Sbjct: 2339176 cgctgctggacgtggtgccgatga 2339153
>gb|AC012615.4| Homo sapiens chromosome 19 clone CTB-31O20, complete sequence Length = 149252 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 gaagggcaaggccaagggca 183 |||||||||||||||||||| Sbjct: 7047 gaagggcaaggccaagggca 7028
>gb|AC005724.3| Arabidopsis thaliana chromosome 2 clone MSF3 map CIC06E08, complete sequence Length = 88413 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 caagcccaacgccaatggct 65 |||||||||||||||||||| Sbjct: 53109 caagcccaacgccaatggct 53090
>gb|AC158782.5| Mus musculus chromosome 5, clone RP23-134H19, complete sequence Length = 228458 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ctcgcgccgccgccgccccc 89 |||||||||||||||||||| Sbjct: 210626 ctcgcgccgccgccgccccc 210645
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0700A11 Length = 136321 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 ctccctctcgcgccgccgccgccc 87 ||||||||| |||||||||||||| Sbjct: 59081 ctccctctctcgccgccgccgccc 59058
>dbj|AP003445.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1029_F04 Length = 141834 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cctctcgcgccgccgccgcc 86 |||||||||||||||||||| Sbjct: 75171 cctctcgcgccgccgccgcc 75152
>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1007_D04 Length = 125503 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ctccctctcgcgccgccgcc 83 |||||||||||||||||||| Sbjct: 92533 ctccctctcgcgccgccgcc 92514
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 gcgccgcgccgtcaccgtca 426 |||||||||||||||||||| Sbjct: 4668971 gcgccgcgccgtcaccgtca 4668952
>gb|AY589581.1| Triticum aestivum beta-expansin TaEXPB4 mRNA, complete cds Length = 898 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 339 ctgttcaagggcggcgaggggtgcggcgcctgctac 374 |||||||||| |||| ||| ||||||||||||||| Sbjct: 292 ctgttcaaggacggcatgggctgcggcgcctgctac 327
>dbj|AP004684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0012H03 Length = 163377 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 gctccctctcgcgccgccgccgcc 86 ||||| |||||||||||||||||| Sbjct: 22509 gctccttctcgcgccgccgccgcc 22486
>dbj|AP003620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0596H06 Length = 142832 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 gctccctctcgcgccgccgccgcc 86 ||||| |||||||||||||||||| Sbjct: 128061 gctccttctcgcgccgccgccgcc 128038
>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0040H10 Length = 173301 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 359 gtgcggcgcctgctacaaggtgcggtgc 386 |||||||| ||||||| ||||||||||| Sbjct: 83500 gtgcggcggctgctacgaggtgcggtgc 83527
>emb|AJ276008.1|FPR276008 Festuca pratensis partial mRNA for expansin (exp3 gene) Length = 1117 Score = 40.1 bits (20), Expect = 5.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 328 tgagcccggtgctgttcaagggcggcgaggggtgcggcgcctgctaca 375 ||||||||||||||||||| | ||||| ||||||||| ||||||| Sbjct: 228 tgagcccggtgctgttcaacgacggcgccatgtgcggcgcgtgctaca 275
>dbj|AK101940.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033074I02, full insert sequence Length = 1156 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 359 gtgcggcgcctgctacaaggtgcggtgc 386 |||||||| ||||||| ||||||||||| Sbjct: 427 gtgcggcggctgctacgaggtgcggtgc 454
>dbj|AK072554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128I09, full insert sequence Length = 2050 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 gctccctctcgcgccgccgccgcc 86 ||||| |||||||||||||||||| Sbjct: 56 gctccttctcgcgccgccgccgcc 79
>emb|X52376.1|RSRDS Rat retinal degradation slow (rds) mRNA Length = 1562 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 tggcgctctgctgcattctgctgc 114 |||||||||||||| ||||||||| Sbjct: 466 tggcgctctgctgctttctgctgc 489
>emb|AJ535071.1|OSA535071 Oryza sativa (japonica cultivar-group) mdr6 gene for MDR-like ABC transporter, exons 1-12 Length = 8274 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cctctcgcgccgccgccgcc 86 |||||||||||||||||||| Sbjct: 25 cctctcgcgccgccgccgcc 6
>dbj|D26448.1|BLYBAD Hordeum vulgare mRNA for betaine aldehyde dehydrogenase, complete cds Length = 1826 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gttcttgctcgacggcggga 153 |||||||||||||||||||| Sbjct: 222 gttcttgctcgacggcggga 241 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,113,739 Number of Sequences: 3902068 Number of extensions: 3113739 Number of successful extensions: 109281 Number of sequences better than 10.0: 112 Number of HSP's better than 10.0 without gapping: 119 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 105686 Number of HSP's gapped (non-prelim): 3595 length of query: 429 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 407 effective length of database: 17,147,199,772 effective search space: 6978910307204 effective search space used: 6978910307204 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
