Clone Information

BLAST Search Result

Clone Name	bast06a04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PSD7_ARATH (O24412) Probable 26S proteasome non-ATPase regulator...	224	1e-58
2	PSD7_HUMAN (P51665) 26S proteasome non-ATPase regulatory subunit...	147	1e-35
3	PSD7_MOUSE (P26516) 26S proteasome non-ATPase regulatory subunit...	147	1e-35
4	PSD7_DROME (P26270) 26S proteasome non-ATPase regulatory subunit...	147	2e-35
5	RPN8_SCHPO (O74440) 26S proteasome regulatory subunit rpn8	141	7e-34
6	RPN8_NEUCR (Q8WZY4) 26S proteasome regulatory subunit rpn-8	138	6e-33
7	RPN8_ASHGO (Q75F44) 26S proteasome regulatory subunit RPN8	134	1e-31
8	RPN8_YEAST (Q08723) 26S proteasome regulatory subunit RPN8	129	3e-30
9	RPN8_CANGA (Q6FMD8) 26S proteasome regulatory subunit RPN8	128	6e-30
10	IF35_HUMAN (O00303) Eukaryotic translation initiation factor 3 s...	74	1e-13
11	IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 s...	74	1e-13
12	IF35_ARATH (O04202) Eukaryotic translation initiation factor 3 s...	72	5e-13
13	CSN6B_ARATH (Q8W1P0) COP9 signalosome complex subunit 6b (Signal...	58	1e-08
14	CSN6A_ARATH (Q8W206) COP9 signalosome complex subunit 6a (Signal...	57	2e-08
15	CSN6_XENLA (Q6NUC2) COP9 signalosome complex subunit 6 (Signalos...	54	2e-07
16	CSN6_MOUSE (O88545) COP9 signalosome complex subunit 6 (Signalos...	53	3e-07
17	CSN6_HUMAN (Q7L5N1) COP9 signalosome complex subunit 6 (Signalos...	52	5e-07
18	CSN6_DROME (Q9VCY3) COP9 signalosome complex subunit 6 (Signalos...	45	9e-05
19	CSN6_CAEEL (Q95PZ0) COP9 signalosome complex subunit 6 (Signalos...	45	1e-04
20	IF33_MOUSE (Q91WK2) Eukaryotic translation initiation factor 3 s...	44	1e-04
21	IF33_HUMAN (O15372) Eukaryotic translation initiation factor 3 s...	44	1e-04
22	IF33_BOVIN (Q56JZ5) Eukaryotic translation initiation factor 3 s...	44	1e-04
23	IF33_ARATH (Q9C5Z2) Eukaryotic translation initiation factor 3 s...	44	2e-04
24	PSDE_ARATH (Q9LT08) 26S proteasome non-ATPase regulatory subunit...	38	0.011
25	CSN5_DROME (Q9XZ58) COP9 signalosome complex subunit 5 (EC 3.4.-...	37	0.031
26	CSN5_XENTR (Q6P635) COP9 signalosome complex subunit 5 (EC 3.4.-...	34	0.20
27	CSN5_XENLA (Q6GLM9) COP9 signalosome complex subunit 5 (EC 3.4.-...	34	0.20
28	RPN11_ASHGO (Q750E9) 26S proteasome regulatory subunit RPN11	34	0.20
29	YPT5_CAEEL (P41883) Hypothetical protein F37A4.5 in chromosome III	33	0.26
30	CSN5_MOUSE (O35864) COP9 signalosome complex subunit 5 (EC 3.4.-...	33	0.26
31	CSN5_HUMAN (Q92905) COP9 signalosome complex subunit 5 (EC 3.4.-...	33	0.26
32	RPN11_SCHPO (P41878) 26S proteasome regulatory subunit rpn11 (Pr...	33	0.26
33	PSDE_DROME (Q9V3H2) 26S proteasome non-ATPase regulatory subunit...	33	0.26
34	PSDE_CAEEL (O76577) 26S proteasome non-ATPase regulatory subunit...	33	0.34
35	CSN5_BRARE (Q6PC30) COP9 signalosome complex subunit 5 (EC 3.4.-...	33	0.34
36	PSDE_MOUSE (O35593) 26S proteasome non-ATPase regulatory subunit...	33	0.34
37	PSDE_HUMAN (O00487) 26S proteasome non-ATPase regulatory subunit...	33	0.34
38	RPN11_CANGA (Q6FKS1) 26S proteasome regulatory subunit RPN11	32	0.58
39	RPN11_YEAST (P43588) 26S proteasome regulatory subunit RPN11 (MP...	32	0.76
40	CSN5_DEBHA (Q6BMQ3) COP9 signalosome complex subunit 5 (EC 3.4.-.-)	32	0.99
41	CSN5_KLULA (Q6CRJ8) COP9 signalosome complex subunit 5 (EC 3.4.-.-)	32	0.99
42	CSN5_SCHPO (O94454) COP9 signalosome complex subunit 5 (EC 3.4.-.-)	31	1.3
43	HPAB2_PSESM (Q8RSY1) Effector protein hopAB2 (Avirulence protein...	31	1.7
44	HWP1_CANAL (P46593) Hyphal wall protein 1 (Cell elongation prote...	30	2.2
45	CSN5_NEUCR (Q7RXX8) COP9 signalosome complex subunit 5 (EC 3.4.-.-)	30	2.2
46	CSN5B_ARATH (Q8LAZ7) COP9 signalosome complex subunit 5b (EC 3.4...	30	2.9
47	REXO4_MOUSE (Q6PAQ4) RNA exonuclease 4 (EC 3.1.-.-) (Exonuclease...	30	3.8
48	CSN5A_ARATH (Q9FVU9) COP9 signalosome complex subunit 5a (EC 3.4...	30	3.8
49	G3P_PSEAE (P27726) Glyceraldehyde-3-phosphate dehydrogenase (EC ...	29	4.9
50	AAA_STAS1 (Q49UX4) N-acetylmuramoyl-L-alanine amidase aaa precur...	29	4.9
51	IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2	29	4.9
52	EFNA1_RAT (P97553) Ephrin-A1 precursor (EPH-related receptor tyr...	29	4.9
53	EFNA1_MOUSE (P52793) Ephrin-A1 precursor (EPH-related receptor t...	29	4.9
54	CCA2_THEAC (Q9V302) CCA-adding enzyme (EC 2.7.7.25) (EC 2.7.7.21...	29	6.4
55	C99A1_SORBI (O48957) Cytochrome P450 CYP99A1 (EC 1.14.-.-) (Frag...	29	6.4
56	REXO4_HUMAN (Q9GZR2) RNA exonuclease 4 (EC 3.1.-.-) (Exonuclease...	29	6.4
57	CSN5_CAEEL (P91001) COP9 signalosome complex subunit 5 (EC 3.4.-...	29	6.4
58	CSN5_GIBZE (Q4IJM4) COP9 signalosome complex subunit 5 (EC 3.4.-.-)	28	8.4
59	IF2_SYNY3 (P72689) Translation initiation factor IF-2	28	8.4
60	IF2_STRAW (Q82K53) Translation initiation factor IF-2	28	8.4
61	IF2_PROMP (Q7UZZ9) Translation initiation factor IF-2	28	8.4
62	CSN6B_BRAOL (P68357) COP9 signalosome complex subunit 6b (Signal...	28	8.4

>PSD7_ARATH (O24412) Probable 26S proteasome non-ATPase regulatory subunit 7|
           (26S proteasome regulatory subunit rpn8) (MOV34 protein)
          Length = 308

 Score =  224 bits (570), Expect = 1e-58
 Identities = 106/119 (89%), Positives = 113/119 (94%)
 Frame = +1

Query: 97  MDVVKAAQLSGRTLEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNS 276
           MDV+K  Q+S RT+EKVVVHPLVLLSIVDHYNRVA+D+ KRVVGVLLG+SSRGVVDVTNS
Sbjct: 1   MDVIKTQQISARTIEKVVVHPLVLLSIVDHYNRVAKDSSKRVVGVLLGSSSRGVVDVTNS 60

Query: 277 YAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHALF 453
           YAVPFEEDDKDP IWFLDHNYHESMF MFKRINAKEHVVGWYSTGPKL+ENDLDVHALF
Sbjct: 61  YAVPFEEDDKDPSIWFLDHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALF 119

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>PSD7_HUMAN (P51665) 26S proteasome non-ATPase regulatory subunit 7 (26S|
           proteasome regulatory subunit rpn8) (26S proteasome
           regulatory subunit S12) (Proteasome subunit p40) (Mov34
           protein homolog)
          Length = 324

 Score =  147 bits (372), Expect = 1e-35
 Identities = 65/106 (61%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
 Frame = +1

Query: 136 LEKVVVHPLVLLSIVDHYNRVAR-DTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDP 312
           ++KVVVHPLVLLS+VDH+NR+ +   +KRVVGVLLG+  + V+DV+NS+AVPF+EDDKD 
Sbjct: 6   VQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDD 65

Query: 313 RIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHAL 450
            +WFLDH+Y E+M+ MFK++NA+E +VGWY TGPKL +ND+ ++ L
Sbjct: 66  SVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINEL 111

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>PSD7_MOUSE (P26516) 26S proteasome non-ATPase regulatory subunit 7 (26S|
           proteasome regulatory subunit rpn8) (26S proteasome
           regulatory subunit S12) (Proteasome subunit p40) (Mov34
           protein)
          Length = 321

 Score =  147 bits (372), Expect = 1e-35
 Identities = 65/106 (61%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
 Frame = +1

Query: 136 LEKVVVHPLVLLSIVDHYNRVAR-DTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDP 312
           ++KVVVHPLVLLS+VDH+NR+ +   +KRVVGVLLG+  + V+DV+NS+AVPF+EDDKD 
Sbjct: 6   VQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDD 65

Query: 313 RIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHAL 450
            +WFLDH+Y E+M+ MFK++NA+E +VGWY TGPKL +ND+ ++ L
Sbjct: 66  SVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINEL 111

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>PSD7_DROME (P26270) 26S proteasome non-ATPase regulatory subunit 7 (26S|
           proteasome regulatory subunit rpn8) (26S proteasome
           regulatory subunit S12) (Proteasome subunit p40)
           (Proteasome subunit p39B) (Protein Mov34)
          Length = 337

 Score =  147 bits (370), Expect = 2e-35
 Identities = 67/108 (62%), Positives = 91/108 (84%), Gaps = 2/108 (1%)
 Frame = +1

Query: 133 TLEKVVVHPLVLLSIVDHYNRVAR-DTRKRVVGVLLGT-SSRGVVDVTNSYAVPFEEDDK 306
           ++ KV+VHPLVLLS+VDH+NR+ +   +KRVVGVLLG   S+GV+DV+NS+AVPF+EDDK
Sbjct: 6   SVNKVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDK 65

Query: 307 DPRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHAL 450
           D  +WFLDH+Y E+M+ MFK++NA+E VVGWY TGPKL +ND+ ++ L
Sbjct: 66  DKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINEL 113

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>RPN8_SCHPO (O74440) 26S proteasome regulatory subunit rpn8|
          Length = 324

 Score =  141 bits (356), Expect = 7e-34
 Identities = 63/104 (60%), Positives = 86/104 (82%)
 Frame = +1

Query: 139 EKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRI 318
           ++V+VHPLVLLS VD YNR A+ T++RVVG+LLG ++  VV+V NSYA+PFEED+K+  +
Sbjct: 15  QQVIVHPLVLLSAVDSYNRSAKGTKRRVVGILLGQNNGDVVNVANSYAIPFEEDEKNASV 74

Query: 319 WFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHAL 450
           WFLDHN+ ESM  MFK+INA E +VGWY TGP+L+ +DL+++ L
Sbjct: 75  WFLDHNFMESMNEMFKKINANEKLVGWYHTGPQLRPSDLEINNL 118

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>RPN8_NEUCR (Q8WZY4) 26S proteasome regulatory subunit rpn-8|
          Length = 352

 Score =  138 bits (348), Expect = 6e-33
 Identities = 66/105 (62%), Positives = 82/105 (78%), Gaps = 2/105 (1%)
 Frame = +1

Query: 145 VVVHPLVLLSIVDHYNRVA--RDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRI 318
           V V PLVLLS+VDHYNR    +   KRVVGVLLG +    V V+NS+AVPFEEDDKDP +
Sbjct: 16  VSVAPLVLLSVVDHYNRTQANKSKSKRVVGVLLGQNDGKNVRVSNSFAVPFEEDDKDPSV 75

Query: 319 WFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHALF 453
           WFLDHNY ESM  MFK++NA+E ++GWY +GPKL+ +DLD++ LF
Sbjct: 76  WFLDHNYVESMNDMFKKVNAREKLIGWYHSGPKLRASDLDINELF 120

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>RPN8_ASHGO (Q75F44) 26S proteasome regulatory subunit RPN8|
          Length = 326

 Score =  134 bits (337), Expect = 1e-31
 Identities = 61/105 (58%), Positives = 81/105 (77%)
 Frame = +1

Query: 139 EKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRI 318
           E+V V PLVLLS++DHY R+     KR VGVLLG +S   + VTNS+A+PFEED+K+P +
Sbjct: 6   EQVNVAPLVLLSVLDHYKRMNTPDNKRCVGVLLGDNSGSTIKVTNSFALPFEEDEKNPDV 65

Query: 319 WFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHALF 453
           WFLDHNY E+M  M K+INAKE ++GWY +GPKL+ +DL ++ LF
Sbjct: 66  WFLDHNYIENMNDMCKKINAKEKMIGWYHSGPKLRSSDLKINGLF 110

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>RPN8_YEAST (Q08723) 26S proteasome regulatory subunit RPN8|
          Length = 337

 Score =  129 bits (324), Expect = 3e-30
 Identities = 58/105 (55%), Positives = 78/105 (74%)
 Frame = +1

Query: 139 EKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRI 318
           EKV + PLVLLS +DHY R      KR VGV+LG ++   + VTNS+A+PFEED+K+  +
Sbjct: 5   EKVTIAPLVLLSALDHYERTQTKENKRCVGVILGDANSSTIRVTNSFALPFEEDEKNSDV 64

Query: 319 WFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHALF 453
           WFLDHNY E+M  M K+INAKE ++GWY +GPKL+ +DL ++ LF
Sbjct: 65  WFLDHNYIENMNEMCKKINAKEKLIGWYHSGPKLRASDLKINELF 109

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>RPN8_CANGA (Q6FMD8) 26S proteasome regulatory subunit RPN8|
          Length = 329

 Score =  128 bits (322), Expect = 6e-30
 Identities = 58/105 (55%), Positives = 77/105 (73%)
 Frame = +1

Query: 139 EKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRI 318
           + V + PLVLLS++DHY R      KR VGV+LG S    + VTNS+A+PFEED+K+  +
Sbjct: 6   DNVTIAPLVLLSVLDHYERTNTPEGKRCVGVILGDSQTNTIRVTNSFALPFEEDEKNSDV 65

Query: 319 WFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHALF 453
           WFLDHNY ESM  M K+INAKE ++GWY +GPKL+ +DL ++ LF
Sbjct: 66  WFLDHNYIESMNEMCKKINAKEKLIGWYHSGPKLRASDLKINELF 110

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>IF35_HUMAN (O00303) Eukaryotic translation initiation factor 3 subunit 5|
           (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f)
          Length = 357

 Score = 74.3 bits (181), Expect = 1e-13
 Identities = 35/104 (33%), Positives = 64/104 (61%)
 Frame = +1

Query: 145 VVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWF 324
           V +HP++L SIVD Y R   +   RV+G LLGT  +  V+VTN ++VP  E + +  +  
Sbjct: 92  VRLHPVILASIVDSYER-RNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV-- 148

Query: 325 LDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHALFT 456
            D  + ++M+ + K+++  E ++GWY+TG  + E+ + +H  ++
Sbjct: 149 -DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYS 191

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>IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 subunit 5|
           (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f)
          Length = 361

 Score = 74.3 bits (181), Expect = 1e-13
 Identities = 35/104 (33%), Positives = 64/104 (61%)
 Frame = +1

Query: 145 VVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWF 324
           V +HP++L SIVD Y R   +   RV+G LLGT  +  V+VTN ++VP  E + +  +  
Sbjct: 96  VRLHPVILASIVDSYER-RNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV-- 152

Query: 325 LDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHALFT 456
            D  + ++M+ + K+++  E ++GWY+TG  + E+ + +H  ++
Sbjct: 153 -DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYS 195

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>IF35_ARATH (O04202) Eukaryotic translation initiation factor 3 subunit 5|
           (eIF-3 epsilon) (eIF3 p32 subunit) (eIF3f)
          Length = 293

 Score = 72.4 bits (176), Expect = 5e-13
 Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
 Frame = +1

Query: 151 VHPLVLLSIVDHYNRVARDTRKRVVGVLLGTS-SRGVVDVTNSYAVPFEEDDKDPRIWFL 327
           +HPLV+ ++ D + R   D+ +RV+G LLG+    G VD+ NSYAVP  E      +   
Sbjct: 30  IHPLVIFNVCDCFVR-RPDSAERVIGTLLGSILPDGTVDIRNSYAVPHNESSDQVAV--- 85

Query: 328 DHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHALF 453
           D +YH +M +   ++N+KE +VGWYSTG  +      +H  +
Sbjct: 86  DIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSLIHDFY 127

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>CSN6B_ARATH (Q8W1P0) COP9 signalosome complex subunit 6b (Signalosome subunit|
           6b) (AtCSN6b)
          Length = 317

 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 22/120 (18%)
 Frame = +1

Query: 151 VHPLVLLSIVDHYNRVARDTRK----------------------RVVGVLLGTSSRGVVD 264
           +HPLV+L+I DH+ RV                            RV G ++G      V+
Sbjct: 13  LHPLVMLNISDHFTRVKTQLNPPAASCATGNGSNNADAMLLQNPRVYGCVIGLQRGRTVE 72

Query: 265 VTNSYAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVH 444
           + NS+ + F     DP +  LD ++ E    ++K++    +V+GWYSTG    E+D+ +H
Sbjct: 73  IFNSFELIF-----DPALDTLDRSFLEKKQELYKKVFPDFYVLGWYSTGSDATESDMHIH 127

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>CSN6A_ARATH (Q8W206) COP9 signalosome complex subunit 6a (Signalosome subunit|
           6a) (AtCSN6a)
          Length = 317

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 22/120 (18%)
 Frame = +1

Query: 151 VHPLVLLSIVDHYNRVARDTRK----------------------RVVGVLLGTSSRGVVD 264
           +HPLV+++I DHY RV                            RV G ++G      V+
Sbjct: 13  LHPLVIVNISDHYTRVKTQLNPPASICASGHGSNNGEAMFQQNPRVYGCVIGVQRGRTVE 72

Query: 265 VTNSYAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVH 444
           + NS+ + +     DP    LD ++ E    ++K++    +++GWYSTG   +E+D+ +H
Sbjct: 73  IFNSFELLY-----DPSTQTLDRSFLEKKQELYKKVFPDFYILGWYSTGSDAEESDMHIH 127

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>CSN6_XENLA (Q6NUC2) COP9 signalosome complex subunit 6 (Signalosome subunit 6)|
          Length = 318

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 5/124 (4%)
 Frame = +1

Query: 88  GEEMDVVKAAQLSGRTLE---KVVVHPLVLLSIVDHYNRVARDTRK--RVVGVLLGTSSR 252
           G E+DV     +  + +     V +HPLV+L+I DH+ R+     +  +V+G L+G    
Sbjct: 10  GMEVDVAALPSVMAQGVTGSVTVALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQEG 69

Query: 253 GVVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKEND 432
             ++V NS+ +  + +D+   I   +  Y+ +    FK++      +GWY+TG     +D
Sbjct: 70  RNIEVMNSFELLSQINDEKITI---NKEYYYTKEEQFKQVFKDMEFLGWYTTGGTPDPSD 126

Query: 433 LDVH 444
           + VH
Sbjct: 127 IHVH 130

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>CSN6_MOUSE (O88545) COP9 signalosome complex subunit 6 (Signalosome subunit 6)|
           (SGN6) (JAB1-containing signalosome subunit 6)
          Length = 324

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
 Frame = +1

Query: 88  GEEMDV-VKAAQLSGRTLE-KVVVHPLVLLSIVDHYNRVARDTRK--RVVGVLLGTSSRG 255
           G E+D  V +   SG T    V +HPLV+L+I DH+ R+     +  +V+G L+G     
Sbjct: 17  GMEVDAAVPSVMASGVTGSVSVALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQEGR 76

Query: 256 VVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDL 435
            ++V NS+ +     ++      +D  Y+ +    FK++  +   +GWY+TG     +D+
Sbjct: 77  NIEVMNSFELLSHTVEEKI---IIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDI 133

Query: 436 DVH 444
            VH
Sbjct: 134 HVH 136

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>CSN6_HUMAN (Q7L5N1) COP9 signalosome complex subunit 6 (Signalosome subunit 6)|
           (SGN6) (JAB1-containing signalosome subunit 6)
           (Vpr-interacting protein) (hVIP) (MOV34 homolog)
          Length = 327

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 5/124 (4%)
 Frame = +1

Query: 88  GEEMD--VVKAAQLSGRTLE-KVVVHPLVLLSIVDHYNRVARDTRK--RVVGVLLGTSSR 252
           G E+D  VV +    G T    V +HPLV+L+I DH+ R+     +  +V+G L+G    
Sbjct: 19  GMEVDAAVVPSVMACGVTGSVSVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEG 78

Query: 253 GVVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKEND 432
             ++V NS+ +     ++      +D  Y+ +    FK++  +   +GWY+TG     +D
Sbjct: 79  RNIEVMNSFELLSHTVEEKI---IIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSD 135

Query: 433 LDVH 444
           + VH
Sbjct: 136 IHVH 139

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>CSN6_DROME (Q9VCY3) COP9 signalosome complex subunit 6 (Signalosome subunit 6)|
           (Dch6)
          Length = 341

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 26/116 (22%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
 Frame = +1

Query: 100 DVVKAAQLSGRTLEKVVVHPLVLLSIVDHYNR--VARDTRKRVVGVLLGTSSRGVVDVTN 273
           +++ AA  SG     + +HPLV+++I +H+ R        ++V G L+G      +++ N
Sbjct: 41  NIMAAAGTSGSVT--ISLHPLVIMNISEHWTRFRAQHGEPRQVYGALIGKQKGRNIEIMN 98

Query: 274 SYAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDV 441
           S+ +  +    +  I   + +Y+      +K++ +    +GWY+TG     +D+ +
Sbjct: 99  SFELKTDVIGDETVI---NKDYYNKKEQQYKQVFSDLDFIGWYTTGDNPTADDIKI 151

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>CSN6_CAEEL (Q95PZ0) COP9 signalosome complex subunit 6 (Signalosome subunit 6)|
          Length = 426

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
 Frame = +1

Query: 124 SGRTLEKVVVHPLVLLSIVDHYNRV---ARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFE 294
           SG    KV++HPLV++ + +HY+R       T K+V G +LG  +   V+  NS+ +  E
Sbjct: 7   SGSCSSKVLLHPLVIMQMSEHYSRTKVQQGPTVKKVFGAILGRQNGRQVEAINSFVLKME 66

Query: 295 -EDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTG 411
            E+  +P  +  +H    +    +  +  +  V+G Y  G
Sbjct: 67  TEEMAEPVTFSTEHLLQRA--DQYLEVFPELQVIGLYCAG 104

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>IF33_MOUSE (Q91WK2) Eukaryotic translation initiation factor 3 subunit 3|
           (eIF-3 gamma) (eIF3 p40 subunit) (eIF3h)
          Length = 352

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
 Frame = +1

Query: 136 LEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVP-FEEDDKDP 312
           +++V +  LV+L I+ HY    + T   V GVLLG      +++TN +  P   EDD D 
Sbjct: 36  VKQVQIDGLVVLKIIKHYQEEGQGTEV-VQGVLLGLVVEDRLEITNCFPFPQHTEDDAD- 93

Query: 313 RIWFLDHNYHESMFSMFKRINAKEHVVGWYST 408
              F +  Y   M    + +N     VGWY +
Sbjct: 94  ---FDEVQYQMEMMRSLRHVNIDHLHVGWYQS 122

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>IF33_HUMAN (O15372) Eukaryotic translation initiation factor 3 subunit 3|
           (eIF-3 gamma) (eIF3 p40 subunit) (eIF3h)
          Length = 352

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
 Frame = +1

Query: 136 LEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVP-FEEDDKDP 312
           +++V +  LV+L I+ HY    + T   V GVLLG      +++TN +  P   EDD D 
Sbjct: 36  VKQVQIDGLVVLKIIKHYQEEGQGTEV-VQGVLLGLVVEDRLEITNCFPFPQHTEDDAD- 93

Query: 313 RIWFLDHNYHESMFSMFKRINAKEHVVGWYST 408
              F +  Y   M    + +N     VGWY +
Sbjct: 94  ---FDEVQYQMEMMRSLRHVNIDHLHVGWYQS 122

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>IF33_BOVIN (Q56JZ5) Eukaryotic translation initiation factor 3 subunit 3|
           (eIF-3 gamma)
          Length = 352

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
 Frame = +1

Query: 136 LEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVP-FEEDDKDP 312
           +++V +  LV+L I+ HY    + T   V GVLLG      +++TN +  P   EDD D 
Sbjct: 36  VKQVQIDGLVVLKIIKHYQEEGQGTEV-VQGVLLGLVVEDRLEITNCFPFPQHTEDDAD- 93

Query: 313 RIWFLDHNYHESMFSMFKRINAKEHVVGWYST 408
              F +  Y   M    + +N     VGWY +
Sbjct: 94  ---FDEVQYQMEMMRSLRHVNIDHLHVGWYQS 122

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>IF33_ARATH (Q9C5Z2) Eukaryotic translation initiation factor 3 subunit 3|
           (eIF-3 gamma) (eIF3 p38 subunit) (eIF3h)
          Length = 337

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 27/91 (29%), Positives = 41/91 (45%)
 Frame = +1

Query: 136 LEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPR 315
           L  V +  L +L I+ H    +      V G LLG     V++VTN +  P  +DD++  
Sbjct: 22  LRVVQIEGLAVLKIIKHCKEFSPTL---VTGQLLGLDVGSVLEVTNCFPFPVRDDDEE-- 76

Query: 316 IWFLDHNYHESMFSMFKRINAKEHVVGWYST 408
           I     NY   M    + +N   + VGWY +
Sbjct: 77  IEADGANYQLEMMRCLREVNVDNNTVGWYQS 107

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>PSDE_ARATH (Q9LT08) 26S proteasome non-ATPase regulatory subunit 14 (26S|
           proteasome regulatory subunit rpn11)
          Length = 308

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
 Frame = +1

Query: 133 TLEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTS-SRGVVDVTNSYAVPFEEDDKD 309
           T E+V +  L LL ++ H           V+G++LG       V V + +A+P  +    
Sbjct: 26  TSEQVYISSLALLKMLKHGRA---GVPMEVMGLMLGEFVDEYTVRVVDVFAMP--QSGTG 80

Query: 310 PRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGP 414
             +  +DH +  +M  M K+    E VVGWY + P
Sbjct: 81  VSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHP 115

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>CSN5_DROME (Q9XZ58) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5) (Dch5) (JAB1 homolog)
          Length = 327

 Score = 36.6 bits (83), Expect = 0.031
 Identities = 22/90 (24%), Positives = 38/90 (42%)
 Frame = +1

Query: 145 VVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWF 324
           + +  L LL +V H           V+G++LG      + V +++A+P E  +       
Sbjct: 52  IKISALALLKMVMH---ARSGGTLEVMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQA 108

Query: 325 LDHNYHESMFSMFKRINAKEHVVGWYSTGP 414
             + Y  +     K +   EH VGWY + P
Sbjct: 109 QAYEYMTAYMEAAKEVGRMEHAVGWYHSHP 138

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>CSN5_XENTR (Q6P635) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5)
          Length = 334

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 21/88 (23%), Positives = 38/88 (43%)
 Frame = +1

Query: 151 VHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLD 330
           V  L LL +V H           V+G++LG      + + +S+A+P E  +         
Sbjct: 57  VSALALLKMVMH---ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAA 113

Query: 331 HNYHESMFSMFKRINAKEHVVGWYSTGP 414
           + Y  +     K++   E+ +GWY + P
Sbjct: 114 YEYMAAYIENAKQVGRLENAIGWYHSHP 141

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>CSN5_XENLA (Q6GLM9) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5)
          Length = 332

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 21/88 (23%), Positives = 38/88 (43%)
 Frame = +1

Query: 151 VHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLD 330
           V  L LL +V H           V+G++LG      + + +S+A+P E  +         
Sbjct: 55  VSALALLKMVMH---ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAA 111

Query: 331 HNYHESMFSMFKRINAKEHVVGWYSTGP 414
           + Y  +     K++   E+ +GWY + P
Sbjct: 112 YEYMAAYIENAKQVGRLENAIGWYHSHP 139

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>RPN11_ASHGO (Q750E9) 26S proteasome regulatory subunit RPN11|
          Length = 311

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
 Frame = +1

Query: 133 TLEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTS-SRGVVDVTNSYAVPFEEDDKD 309
           T E V +  L LL ++ H           V+G++LG       V+V + +A+P  +    
Sbjct: 28  TKETVYISSLALLKMLKHSRA---GVPMEVMGLMLGDFVDEYTVNVVDVFAMP--QSGTG 82

Query: 310 PRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGP 414
             +  +D  +   M  M K+    + VVGWY + P
Sbjct: 83  VSVEAVDDVFQAKMMDMLKQTGRDQMVVGWYHSHP 117

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>YPT5_CAEEL (P41883) Hypothetical protein F37A4.5 in chromosome III|
          Length = 319

 Score = 33.5 bits (75), Expect = 0.26
 Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
 Frame = +1

Query: 133 TLEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRG-VVDVTNSYAVPFEEDDKD 309
           T E V +  L LL ++ H           V+G++LG       ++VT+ +A+P  +    
Sbjct: 25  TSETVNISSLALLKMLRH---ARSGIPLEVMGLMLGDFVDDYTINVTDVFAMP--QSGTS 79

Query: 310 PRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGP 414
             +  +D  Y      + K +   E+VVGWY + P
Sbjct: 80  VTVESVDPVYQTKHMDLLKLVGRTENVVGWYHSHP 114

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>CSN5_MOUSE (O35864) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5) (SGN5) (Jun activation
           domain-binding protein 1) (Kip1 C-terminus-interacting
           protein 2)
          Length = 333

 Score = 33.5 bits (75), Expect = 0.26
 Identities = 20/88 (22%), Positives = 38/88 (43%)
 Frame = +1

Query: 151 VHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLD 330
           +  L LL +V H           V+G++LG      + + +S+A+P E  +         
Sbjct: 56  ISALALLKMVMH---ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAA 112

Query: 331 HNYHESMFSMFKRINAKEHVVGWYSTGP 414
           + Y  +     K++   E+ +GWY + P
Sbjct: 113 YEYMAAYIENAKQVGRLENAIGWYHSHP 140

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>CSN5_HUMAN (Q92905) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5) (SGN5) (Jun activation
           domain-binding protein 1)
          Length = 333

 Score = 33.5 bits (75), Expect = 0.26
 Identities = 20/88 (22%), Positives = 38/88 (43%)
 Frame = +1

Query: 151 VHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLD 330
           +  L LL +V H           V+G++LG      + + +S+A+P E  +         
Sbjct: 56  ISALALLKMVMH---ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAA 112

Query: 331 HNYHESMFSMFKRINAKEHVVGWYSTGP 414
           + Y  +     K++   E+ +GWY + P
Sbjct: 113 YEYMAAYIENAKQVGRLENAIGWYHSHP 140

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>RPN11_SCHPO (P41878) 26S proteasome regulatory subunit rpn11 (Protein pad1)|
          Length = 308

 Score = 33.5 bits (75), Expect = 0.26
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
 Frame = +1

Query: 139 EKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRG-VVDVTNSYAVPFEEDDKDPR 315
           E V +  L LL ++ H       T   V+G++LG       V V + +A+P  +      
Sbjct: 28  ECVYISSLALLKMLRHGRH---GTPMEVMGLMLGEFVDDFTVRVVDVFAMP--QSGTGVS 82

Query: 316 IWFLDHNYHESMFSMFKRINAKEHVVGWYSTGP 414
           +  +D  + ++M  M K+    E VVGWY + P
Sbjct: 83  VEAVDPVFQKNMMDMLKQTGRPEMVVGWYHSHP 115

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>PSDE_DROME (Q9V3H2) 26S proteasome non-ATPase regulatory subunit 14 (26S|
           proteasome regulatory subunit rpn11) (26S proteasome
           regulatory complex subunit p37B) (Yippee-interacting
           protein 5)
          Length = 308

 Score = 33.5 bits (75), Expect = 0.26
 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
 Frame = +1

Query: 133 TLEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRG-VVDVTNSYAVPFEEDDKD 309
           T E+V +  L LL ++ H           V+G++LG       V V + +A+P  +    
Sbjct: 25  TAEQVYISSLALLKMLKHGRA---GVPMEVMGLMLGEFVDDYTVQVIDVFAMP--QTGTG 79

Query: 310 PRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGP 414
             +  +D  +   M  M K+    E VVGWY + P
Sbjct: 80  VSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHP 114

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>PSDE_CAEEL (O76577) 26S proteasome non-ATPase regulatory subunit 14 (26S|
           proteasome regulatory subunit rpn11)
          Length = 312

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
 Frame = +1

Query: 133 TLEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRG-VVDVTNSYAVPFEEDDKD 309
           T E V +  L LL ++ H           V+G++LG       V+V + +A+P  +    
Sbjct: 29  TSETVYISSLALLKMLKHGRA---GVPMEVMGLMLGEFVDDYTVNVIDVFAMP--QSGTG 83

Query: 310 PRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGP 414
             +  +D  +   M  M K+    E VVGWY + P
Sbjct: 84  VSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHP 118

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>CSN5_BRARE (Q6PC30) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5)
          Length = 334

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 20/85 (23%), Positives = 37/85 (43%)
 Frame = +1

Query: 160 LVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLDHNY 339
           L LL +V H           V+G++LG      + + +S+A+P E  +         + Y
Sbjct: 58  LALLKMVMH---ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEY 114

Query: 340 HESMFSMFKRINAKEHVVGWYSTGP 414
             +     K++   E+ +GWY + P
Sbjct: 115 MAAYIENAKQVGRLENAIGWYHSHP 139

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>PSDE_MOUSE (O35593) 26S proteasome non-ATPase regulatory subunit 14 (26S|
           proteasome regulatory subunit rpn11) (MAD1)
          Length = 310

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
 Frame = +1

Query: 133 TLEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRG-VVDVTNSYAVPFEEDDKD 309
           T E+V +  L LL ++ H           V+G++LG       V V + +A+P  +    
Sbjct: 27  TAEQVYISSLALLKMLKHGRA---GVPMEVMGLMLGEFVDDYTVRVIDVFAMP--QSGTG 81

Query: 310 PRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGP 414
             +  +D  +   M  M K+    E VVGWY + P
Sbjct: 82  VSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHP 116

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>PSDE_HUMAN (O00487) 26S proteasome non-ATPase regulatory subunit 14 (26S|
           proteasome regulatory subunit rpn11) (26S
           proteasome-associated PAD1 homolog 1)
          Length = 310

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
 Frame = +1

Query: 133 TLEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRG-VVDVTNSYAVPFEEDDKD 309
           T E+V +  L LL ++ H           V+G++LG       V V + +A+P  +    
Sbjct: 27  TAEQVYISSLALLKMLKHGRA---GVPMEVMGLMLGEFVDDYTVRVIDVFAMP--QSGTG 81

Query: 310 PRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGP 414
             +  +D  +   M  M K+    E VVGWY + P
Sbjct: 82  VSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHP 116

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>RPN11_CANGA (Q6FKS1) 26S proteasome regulatory subunit RPN11|
          Length = 306

 Score = 32.3 bits (72), Expect = 0.58
 Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
 Frame = +1

Query: 133 TLEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTS-SRGVVDVTNSYAVPFEEDDKD 309
           T E V +  + LL ++ H           V+G++LG       V+V + +A+P  +    
Sbjct: 23  TKETVYISSIALLKMLKHGRA---GVPMEVMGLMLGEFVDEYTVNVVDVFAMP--QSGTG 77

Query: 310 PRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGP 414
             +  +D  +   M  M K+    + VVGWY + P
Sbjct: 78  VSVEAVDDVFQARMMDMLKQTGRDQMVVGWYHSHP 112

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>RPN11_YEAST (P43588) 26S proteasome regulatory subunit RPN11 (MPR1 protein)|
          Length = 306

 Score = 32.0 bits (71), Expect = 0.76
 Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
 Frame = +1

Query: 133 TLEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRG-VVDVTNSYAVPFEEDDKD 309
           T E V +  + LL ++ H           V+G++LG       V+V + +A+P  +    
Sbjct: 23  TKETVYISSIALLKMLKHGRA---GVPMEVMGLMLGEFVDDYTVNVVDVFAMP--QSGTG 77

Query: 310 PRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGP 414
             +  +D  +   M  M K+    + VVGWY + P
Sbjct: 78  VSVEAVDDVFQAKMMDMLKQTGRDQMVVGWYHSHP 112

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>CSN5_DEBHA (Q6BMQ3) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 469

 Score = 31.6 bits (70), Expect = 0.99
 Identities = 15/65 (23%), Positives = 29/65 (44%)
 Frame = +1

Query: 220 VVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGW 399
           V+G++ G   +  + V + Y +P E  +         + Y        K++   E++VGW
Sbjct: 85  VMGMMTGKIIKNSIIVMDVYPLPVEGTETRVNAQAEGYEYMVQYLENLKQVGRDENIVGW 144

Query: 400 YSTGP 414
           Y + P
Sbjct: 145 YHSHP 149

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>CSN5_KLULA (Q6CRJ8) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 373

 Score = 31.6 bits (70), Expect = 0.99
 Identities = 15/65 (23%), Positives = 32/65 (49%)
 Frame = +1

Query: 220 VVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGW 399
           V+G+L+G +S  ++ V + Y++P +  +         + Y       F  +  ++ +VGW
Sbjct: 88  VMGMLVGYTSNDMIVVKDCYSLPVQGTETRVNAHMESYEYMVQYLDAF--VTKEDKIVGW 145

Query: 400 YSTGP 414
           Y + P
Sbjct: 146 YHSHP 150

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>CSN5_SCHPO (O94454) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 299

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 20/90 (22%), Positives = 40/90 (44%)
 Frame = +1

Query: 145 VVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWF 324
           V +  + LL ++ H   V++     V+G + G      + + +S+A+P E  +       
Sbjct: 35  VKISAVALLKMLRH---VSQGMPLEVMGYVQGKVEGASLIILDSFALPVEGTETRVNAHE 91

Query: 325 LDHNYHESMFSMFKRINAKEHVVGWYSTGP 414
               Y     ++ K +   E+V+GWY + P
Sbjct: 92  EAQEYSVQYHTLCKSVYRHENVIGWYHSHP 121

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>HPAB2_PSESM (Q8RSY1) Effector protein hopAB2 (Avirulence protein avrPtoB)|
           [Includes: E3 ubiquitin-protein ligase (EC 6.3.2.-)]
          Length = 553

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = -3

Query: 311 GSLSSSSNGTA*ELVTSTTPREEVPRSTPTTRFRVSRATRL 189
           GS +SSSN    +   S TP    P   PT R R+SR+T L
Sbjct: 31  GSGASSSNSPQVQPRPSNTPPSNAPAPPPTGRERLSRSTAL 71

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>HWP1_CANAL (P46593) Hyphal wall protein 1 (Cell elongation protein 2)|
          Length = 634

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -3

Query: 308 SLSSSSNGTA*ELVTSTTPREEVPRSTPTT 219
           S SSSS+ T  +   STTP   VP +TP T
Sbjct: 213 SSSSSSSSTTPKTSASTTPESSVPATTPNT 242

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>CSN5_NEUCR (Q7RXX8) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 336

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 15/65 (23%), Positives = 30/65 (46%)
 Frame = +1

Query: 220 VVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGW 399
           V+G++ G      + +T++Y +P E  +         + Y      + +  N  E+V+GW
Sbjct: 66  VMGMMQGYIEGSTMVITDAYRLPVEGTETRVNAQDEANEYMVEYLRLCREENRLENVIGW 125

Query: 400 YSTGP 414
           Y + P
Sbjct: 126 YHSHP 130

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>CSN5B_ARATH (Q8LAZ7) COP9 signalosome complex subunit 5b (EC 3.4.-.-)|
           (Signalosome subunit 5b) (Jun activation domain-binding
           homolog 1)
          Length = 357

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
 Frame = +1

Query: 139 EKVVVHPLVLLSIVDHYNRVARDTRK-RVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPR 315
           ++V +  L LL +V H    AR      ++G++ G +    + V +++A+P E  +    
Sbjct: 57  KRVHISALALLKMVVH----ARSGGTIEIMGLMQGKTEGDTIIVMDAFALPVEGTETRVN 112

Query: 316 IWFLDHNYHESMFSMFKRINAKEHVVGWYSTGP 414
                + Y        K     E+VVGWY + P
Sbjct: 113 AQSDAYEYMVEYSQTSKLAGRLENVVGWYHSHP 145

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>REXO4_MOUSE (Q6PAQ4) RNA exonuclease 4 (EC 3.1.-.-) (Exonuclease XPMC2)|
           (Prevents mitotic catastrophe 2 protein homolog)
          Length = 432

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +1

Query: 88  GEEMDVVK---AAQLSGRTLEKVVVHPLVLLSIVDHYNRVARDTRK 216
           GEE +VVK   A  L GR L    +H  + +  +DH  +  RDT+K
Sbjct: 314 GEEFEVVKKEVAEMLKGRILVGHALHNDLKVLFLDHPKKKIRDTQK 359

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>CSN5A_ARATH (Q9FVU9) COP9 signalosome complex subunit 5a (EC 3.4.-.-)|
           (Signalosome subunit 5a) (Jun activation domain-binding
           homolog 2)
          Length = 358

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
 Frame = +1

Query: 139 EKVVVHPLVLLSIVDHYNRVARDTRK-RVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPR 315
           ++V +  L LL +V H    AR      ++G++ G +    + V +++A+P E  +    
Sbjct: 57  KRVKISALALLKMVVH----ARSGGTIEIMGLMQGKTDGDTIIVMDAFALPVEGTETRVN 112

Query: 316 IWFLDHNYHESMFSMFKRINAKEHVVGWYSTGP 414
                + Y        K     E+VVGWY + P
Sbjct: 113 AQDDAYEYMVEYSQTNKLAGRLENVVGWYHSHP 145

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>G3P_PSEAE (P27726) Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)|
           (GAPDH)
          Length = 334

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
 Frame = +1

Query: 118 QLSGRTLEKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRG-VVDVTNSYAVPFE 294
           +L+G+     V  P++ +S+VD   +VARDT    V  LL  +S G  V   N+  +   
Sbjct: 224 ELAGKLTGLAVRVPVINVSLVDLTVQVARDTSVDEVNRLLREASEGSPVLGYNTQPLVSV 283

Query: 295 EDDKDPRIWFLDHNY 339
           + + DPR    D N+
Sbjct: 284 DFNHDPRSSIFDANH 298

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>AAA_STAS1 (Q49UX4) N-acetylmuramoyl-L-alanine amidase aaa precursor (EC|
           3.5.1.28)
          Length = 327

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 14/61 (22%), Positives = 30/61 (49%)
 Frame = +1

Query: 211 RKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHV 390
           RK+++  ++GTS+   V  TN+ A    +      +W + + Y+ S+  +    N   +V
Sbjct: 2   RKKIIATVIGTSALAAVTWTNADAATTYKVKSGDSLWSIANKYNMSVAKLKSLNNLTSNV 61

Query: 391 V 393
           +
Sbjct: 62  I 62

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>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2|
          Length = 1033

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
 Frame = +1

Query: 139 EKVVVHPLVL--LSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDP 312
           E +VV P V+  +  VDH      D  ++   V+ G +  G+     +Y V  E +D++ 
Sbjct: 522 EDLVVRPPVVTVMGHVDHGKTRLLDAIRKT-NVIAGEAG-GITQHIGAYQVATEVNDEER 579

Query: 313 RIWFLDHNYHESMFSMFKR 369
           +I F+D   HE+  +M  R
Sbjct: 580 KITFIDTPGHEAFTAMRAR 598

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>EFNA1_RAT (P97553) Ephrin-A1 precursor (EPH-related receptor tyrosine kinase|
           ligand 1) (LERK-1) (Immediate early response protein
           B61)
          Length = 205

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 376 AKEHVVGWYSTGPKLKENDLDVH 444
           A  H+V W S+ PK +E D  VH
Sbjct: 18  ADRHIVFWNSSNPKFREEDYTVH 40

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>EFNA1_MOUSE (P52793) Ephrin-A1 precursor (EPH-related receptor tyrosine kinase|
           ligand 1) (LERK-1) (Immediate early response protein
           B61)
          Length = 205

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 376 AKEHVVGWYSTGPKLKENDLDVH 444
           A  H+V W S+ PK +E D  VH
Sbjct: 18  ADRHIVFWNSSNPKFREEDYTVH 40

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>CCA2_THEAC (Q9V302) CCA-adding enzyme (EC 2.7.7.25) (EC 2.7.7.21) (tRNA|
           nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-
           transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT)
           (Fragment)
          Length = 222

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +1

Query: 286 PFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLKENDLDVHALF 453
           P +E++   RI   D     +     +R+ A+  +VG Y+ G  L++ DLD+   F
Sbjct: 13  PTQEEENRLRIISDDIIRKINSICRSRRLRAEAVIVGSYAKGTNLRDGDLDIFIAF 68

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>C99A1_SORBI (O48957) Cytochrome P450 CYP99A1 (EC 1.14.-.-) (Fragment)|
          Length = 519

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +1

Query: 208 TRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLD 330
           T +  +G L G     VVDV   Y   F   D  P +WF+D
Sbjct: 189 TGRATLGKLCGDEIMSVVDVAVLYGSGFCAGDLFPSLWFVD 229

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>REXO4_HUMAN (Q9GZR2) RNA exonuclease 4 (EC 3.1.-.-) (Exonuclease XPMC2) (hPMC2)|
           (Prevents mitotic catastrophe 2 protein homolog)
          Length = 422

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +1

Query: 88  GEEMDVVK---AAQLSGRTLEKVVVHPLVLLSIVDHYNRVARDTRK 216
           GEE++VV+   A  L GR L    +H  + +  +DH  +  RDT+K
Sbjct: 304 GEELEVVQKEVAEMLKGRILVGHALHNDLKVLFLDHPKKKIRDTQK 349

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>CSN5_CAEEL (P91001) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
           (Signalosome subunit 5) (JAB1 homolog)
          Length = 368

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 20/92 (21%), Positives = 36/92 (39%)
 Frame = +1

Query: 139 EKVVVHPLVLLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRI 318
           +++ +  + LL +  H     R     ++G+L G        + + +A+P E  +     
Sbjct: 54  KQIKISAIALLKMTMH---AKRGGNLEIMGLLQGRIDANSFIILDVFALPVEGTETRVNA 110

Query: 319 WFLDHNYHESMFSMFKRINAKEHVVGWYSTGP 414
               + Y      M      KE VVGWY + P
Sbjct: 111 QAQAYEYMTVYSEMCDTEGRKEKVVGWYHSHP 142

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>CSN5_GIBZE (Q4IJM4) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 340

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
 Frame = +1

Query: 220 VVGVLLGTSSRGVVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMFSMFKRINAKEHVVGW 399
           V+G++ G +      VT+++ +P E  +         + Y      + +    +E+VVGW
Sbjct: 74  VMGLMQGYTQGDTFIVTDAFRLPVEGTETRVNAQDEANEYIVEYLDLCRAQGRQENVVGW 133

Query: 400 YSTGPK----LKENDLDVHAL 450
           Y + P     L   D+D  A+
Sbjct: 134 YHSHPGYGCWLSGIDVDTEAM 154

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>IF2_SYNY3 (P72689) Translation initiation factor IF-2|
          Length = 1001

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
 Frame = +1

Query: 136 LEKVVVHPLV--LLSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKD 309
           L+ +V  P V  ++  VDH      D+ ++   V  G +  G+     +Y V  E +DK 
Sbjct: 488 LDNLVRRPPVVTIMGHVDHGKTTLLDSIRKTK-VAQGEAG-GITQHIGAYHVEVEHNDKT 545

Query: 310 PRIWFLDHNYHESMFSMFKR 369
            +I FLD   HE+  +M  R
Sbjct: 546 EQIVFLDTPGHEAFTAMRAR 565

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>IF2_STRAW (Q82K53) Translation initiation factor IF-2|
          Length = 1046

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
 Frame = +1

Query: 139 EKVVVHPLVL--LSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKDP 312
           E +V  P V+  +  VDH      DT ++   V+ G +  G+     +Y V  E +D++ 
Sbjct: 535 EFLVARPPVVTVMGHVDHGKTRLLDTIRKT-NVVAGEAG-GITQHIGAYQVTTEVNDEER 592

Query: 313 RIWFLDHNYHESMFSMFKR 369
           +I F+D   HE+  +M  R
Sbjct: 593 KITFIDTPGHEAFTAMRAR 611

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>IF2_PROMP (Q7UZZ9) Translation initiation factor IF-2|
          Length = 1169

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
 Frame = +1

Query: 136 LEKVVVHPLVL--LSIVDHYNRVARDTRKRVVGVLLGTSSRGVVDVTNSYAVPFEEDDKD 309
           +E ++  P V+  +  VDH      D+ +     +    + G+     +Y V FE + K 
Sbjct: 656 IESLIKRPPVITVMGHVDHGKTSLLDSIRE--SRVASGEAGGITQHIGAYQVEFEHESKK 713

Query: 310 PRIWFLDHNYHESMFSMFKR 369
            ++ FLD   HE+  +M  R
Sbjct: 714 KKLTFLDTPGHEAFTAMRAR 733

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>CSN6B_BRAOL (P68357) COP9 signalosome complex subunit 6b (Signalosome subunit|
           6b) (Fragments)
          Length = 58

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 151 VHPLVLLSIVDHYNRVARDTRKRVVGVLL 237
           +HPLV+L+I DH  +   D  +  V VLL
Sbjct: 2   LHPLVMLNISDHLTKALMDINESPVYVLL 30


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,811,189
Number of Sequences: 219361
Number of extensions: 609176
Number of successful extensions: 2127
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 2066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2103
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result